Citrus Sinensis ID: 006178
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 658 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGH8 | 664 | Probable LRR receptor-lik | yes | no | 0.993 | 0.984 | 0.679 | 0.0 | |
| C0LGQ4 | 678 | Probable LRR receptor-lik | no | no | 0.917 | 0.890 | 0.322 | 2e-85 | |
| C0LGU7 | 695 | Probable LRR receptor-lik | no | no | 0.914 | 0.866 | 0.301 | 4e-71 | |
| C0LGU5 | 614 | Probable LRR receptor-lik | no | no | 0.799 | 0.856 | 0.303 | 6e-55 | |
| Q9LYN6 | 499 | Probable inactive recepto | no | no | 0.528 | 0.697 | 0.367 | 1e-53 | |
| Q9SIZ4 | 489 | Inactive receptor-like se | no | no | 0.524 | 0.705 | 0.367 | 6e-53 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.755 | 0.451 | 0.289 | 4e-52 | |
| C0LGF4 | 591 | LRR receptor-like serine/ | no | no | 0.816 | 0.908 | 0.285 | 7e-52 | |
| O49318 | 1124 | Probable leucine-rich rep | no | no | 0.810 | 0.474 | 0.285 | 2e-48 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.832 | 0.459 | 0.295 | 2e-48 |
| >sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/668 (67%), Positives = 538/668 (80%), Gaps = 14/668 (2%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS L VL G+ F +C+ FA+NE AL FKEAIYEDP LV+SNWN ++DPC W
Sbjct: 1 MRSKYFCSLALVL-GLFFVSCDGFASNEVQALRRFKEAIYEDPLLVMSNWNDPNSDPCDW 59
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
TGI CS ++D V+KINIS SS+KGFLAPELG +TYLQELILHGN LIG IPKE+G LK L
Sbjct: 60 TGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNL 119
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
KILDLG N L GPIP EIG+L+G++ INLQSNGLTG+LPAELGNL L ELH+DRNRLQG
Sbjct: 120 KILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRNRLQG 179
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
++ SGY + ++ SSAN+ GLC LKVADFSYNFFVG+IPKCLE LP TSFQ
Sbjct: 180 SLLVAGASGYQSKVYSS-NSSANIAGLC--KSLKVADFSYNFFVGNIPKCLENLPRTSFQ 236
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLS--PKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNC+QNKD K R+++ C A +T S PKHQ+A+ V+KH AS+P WLL LEIVT
Sbjct: 237 GNCMQNKDLKHRSSSQCANAQLVKTHGSPSAAPKHQSAQMVAKHHRASKPKWLLALEIVT 296
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
G+MVG+L LVA F+ + R ++ ++IIPWKKS+SEK+ +Y+DSE+LKDV R +RQELE
Sbjct: 297 GSMVGLLLLVALFSAVHRWNNRSTLIIPWKKSSSEKEKFTVYVDSEMLKDVSRLTRQELE 356
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIG S DS +YKGT+KGG EIAVISLC+KEE WTGYLELYFQREVADLAR+N
Sbjct: 357 VACEDFSNIIGLSADSQIYKGTLKGGSEIAVISLCVKEEDWTGYLELYFQREVADLARLN 416
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HENT KLLGYC+E SPFTRMLVF+YASNGTLYEHLHYGE VSW RRMKIVIGIARGLK
Sbjct: 417 HENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLK 476
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
YLH EL PPFTISEL+S+A+YLTEDF+PKLVDF+ WKTILARSEKN + SQG+IC+LP
Sbjct: 477 YLHMELDPPFTISELSSNAIYLTEDFTPKLVDFECWKTILARSEKNLRNISSQGSICVLP 536
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596
+ +E+R+LDV GNIYAFG+LLLEI+SGRPP CKDKG L++WAK++LE PE MS +VDPEL
Sbjct: 537 NGMESRYLDVSGNIYAFGILLLEIVSGRPPYCKDKGFLIEWAKEFLEAPEAMSGLVDPEL 596
Query: 597 KHFSYDDLKVICEVVNLCVNPDIT------KRPSMQELCTMLEGRIDTSISVELKASSLA 650
KHF+ +DL+ +CEV + C+N D T +PS+QELC LE RI SIS EL++SSLA
Sbjct: 597 KHFNQEDLETVCEVASQCLNRDPTNNNNNHNKPSVQELCETLESRISLSISAELRSSSLA 656
Query: 651 WAELALSS 658
WAELAL S
Sbjct: 657 WAELALDS 664
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGQ4|MRH1_ARATH Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 218/677 (32%), Positives = 344/677 (50%), Gaps = 73/677 (10%)
Query: 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDA-DPCHWTGIACSDARDRVLKINISGSSLKG 84
T++ AL F+ + DPH L+NWN D C+W+G+ C D + ++L ++SG SL+G
Sbjct: 27 TSQGSALLKFRARVNSDPHGTLANWNVSGINDLCYWSGVTCVDGKVQIL--DLSGYSLEG 84
Query: 85 FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
LAPEL L+ L+ LIL N+ G IPKE G + L++LDL N L+G IPPE+ N L
Sbjct: 85 TLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLDLRENDLSGQIPPELSNGLSL 144
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+ L N + + ++ L S E+ L ++ P S I+ +
Sbjct: 145 KHLLLSGNKFSDDMRIKIVRLQSSYEVRLKKS------PKLSPLAVLGCINRKLGHCVSR 198
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTL-------- 256
+ + +++ F + + L+ PS + + + ++ + + L
Sbjct: 199 NRIIQVKKVEAIVFRIK---ATSRRFLKAFPSFLEETDIYKRRELLEETSNLAAEPAPSA 255
Query: 257 --------------CGGAPPARTRAG-----------LSPKHQAAEDVSKHQ-------S 284
G+ PA T A K + D+SK+Q
Sbjct: 256 PSPSPGIITEASPRSSGSFPAVTNAKKRRPPLVPPVPSPDKGSTSPDISKNQPQDNKQSK 315
Query: 285 ASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEIL 344
S+ WL + I + VG+L +VA ++ K I PWK S + + +
Sbjct: 316 GSKHVWLYVV-IAVASFVGLLIIVAVIFFCRKRAVKS--IGPWKTGLSGQ----LQKAFV 368
Query: 345 KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLEL 403
V + +R ELE ACEDFSNII + VYKGT+ G EIAV S I E + WT +E+
Sbjct: 369 TGVPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEM 428
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTR 463
++R++ L+RINH+N L+GYC E PF RM+VF+YA NGTL+EHLH E + W+
Sbjct: 429 AYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHLDWSA 488
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP 523
RM+I++G A L+++H + PP ++ NSS +YLT+D++ K+ + + AR
Sbjct: 489 RMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEIYLTDDYAAKVSEIPF--NLEARLNPKK 545
Query: 524 GTLGS-QGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL 582
G + +LP EA N+++FGVL+LEIISG+ + G++ WA YL
Sbjct: 546 HVSGDLEQTSLLLPPEPEA-------NVHSFGVLMLEIISGKLSFSDEYGSIEQWASKYL 598
Query: 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID-TSIS 641
E + + ++DP LK F ++L+VIC+V+ C+ + +RPSM+++ L+ I+ T
Sbjct: 599 EKDD-LGEMIDPSLKTFKEEELEVICDVIRECLKTEQRQRPSMKDVAEQLKQVINITPEK 657
Query: 642 VELKASSLAWAELALSS 658
++S L WAEL + S
Sbjct: 658 ATPRSSPLWWAELEILS 674
|
May be involved in the regulation of root hairs development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGU7|Y5458_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 206/684 (30%), Positives = 318/684 (46%), Gaps = 82/684 (11%)
Query: 30 WALTTFKEAIYEDPHLVLSNWNALDADP-CHWTGIACSDARDRVLKINISGSSLKGFLAP 88
+ L F+ + DPH L+NWN D D C W G+ C D ++V +N+SG SL G LAP
Sbjct: 35 FVLLKFRARVDSDPHGTLANWNVSDHDHFCSWFGVTCVD--NKVQMLNLSGCSLGGTLAP 92
Query: 89 ELGLLTYLQELIL------------------------HGNNLIGIIPKELGLLKRLKILD 124
EL L+ L+ LIL NNL G++P EL + + L
Sbjct: 93 ELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPENLL 152
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--------LGNLISLEELHLDRN 176
L N+ G + + L L K+ + N + A+ LG +S L + RN
Sbjct: 153 LSGNKFAGFMTVKFLRLQSLYKVQMNKNRELSSVSADVLDCVNRKLGYCVSRRSL-ITRN 211
Query: 177 RLQGAV-------------PAGSNSGYTANIH------GMYASSANLTGLCHLSQLKVAD 217
+ + V Y N H ++ L +L+ + D
Sbjct: 212 KAKAFVLRIRATSRHYMVRRESHGKNYVVNYHPSENETSIFKRRELLEETSNLAAMPAPD 271
Query: 218 FSYNFFVGSIPKCLE-YLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAA 276
P+ + P +S L N K+R L + P +
Sbjct: 272 TP-----SPSPEIITIVFPRSSGSFPALTNA--KKRIPPLIPPSSPPPLPTNNTIASDPP 324
Query: 277 EDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH 336
+ + WL + I V +L +VA ++ K I PWK S +
Sbjct: 325 RKFEEKSKGFKDVWLYVV-IGVAAFVAMLIIVAVIFFFRKRAVKS--IGPWKTGLSGQ-- 379
Query: 337 IYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-E 395
+ + V + +R ELE ACEDFSNII + VYKGT+ G EIAV S I E
Sbjct: 380 --LQKAFVTGVPKLNRSELETACEDFSNIIEAFDGYTVYKGTLSSGVEIAVASTAILETR 437
Query: 396 HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE 455
WT +E+ ++R + ++R+NH+N L+GYC E PF RM+VF+YA NGTL+EHLH E
Sbjct: 438 EWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFEHLHDKE 497
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
+ W R +I++G A L+Y+H EL PP + ++L SSA+YLT+D++ K+ + +
Sbjct: 498 MEHLDWNARTRIIMGTAYCLQYMH-ELNPPISHTKLVSSAIYLTDDYAAKVGEV-PFSGQ 555
Query: 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575
+ P + ++ LP E N+Y+FGVL+LEIISG+ +++G+++
Sbjct: 556 TGSKPRKPMSGDLDQSLLPLPPEPET-------NVYSFGVLMLEIISGKLSDSEEEGSIL 608
Query: 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635
WA YLE + + ++DP L + ++L+ IC+V C+ D ++RP M+ + L+
Sbjct: 609 KWASKYLE-NDNLRDMIDPTLTTYKEEELEAICDVARHCLKLDESQRPKMKYVVQQLKEV 667
Query: 636 IDTSI-SVELKASSLAWAELALSS 658
I+ S + S L WAEL + S
Sbjct: 668 INISQEQATPRLSPLWWAELEILS 691
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGU5|Y5457_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 275/623 (44%), Gaps = 97/623 (15%)
Query: 28 EFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLA 87
E AL + K + +D VLS W+ DPC W + CS +GF+
Sbjct: 39 EVAALMSVKNKM-KDEKEVLSGWDINSVDPCTWNMVGCSS---------------EGFVV 82
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L + L GI+ +G L L L L NQLTGPIP E+G L+ L +
Sbjct: 83 ----------SLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETL 132
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+L N +G +PA LG L L L L RN L G VP A L+GL
Sbjct: 133 DLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPH---------------LVAGLSGL 177
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTRA 267
L D S+N G P GN Q LC A P R
Sbjct: 178 SFL------DLSFNNLSGPTPNI--SAKDYRIVGNAFLCGPASQE---LCSDATPVRNAT 226
Query: 268 GLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPW 327
GLS K D SKH S IV ++ ++FL + W
Sbjct: 227 GLSEK-----DNSKHHSL---VLSFAFGIVVAFIISLMFLF--------------FWVLW 264
Query: 328 KKSASEKDHIYIDSEI-LKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPE 384
+S + H+ D E + + RFS +E++ A +FS NI+G +VYKG + G
Sbjct: 265 HRSRLSRSHVQQDYEFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTV 324
Query: 385 IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444
+AV L K+ +TG E+ FQ EV + H N +L G+C +P RMLV+ Y N
Sbjct: 325 VAVKRL--KDPIYTG--EVQFQTEVEMIGLAVHRNLLRLFGFCM--TPEERMLVYPYMPN 378
Query: 445 GTLYEHL--HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502
G++ + L +YGE+ + W RR+ I +G ARGL YLH + P ++ ++ + L E F
Sbjct: 379 GSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESF 438
Query: 503 SPKLVDFDSWKTILAR-SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEII 561
+ DF K + R S G+ G I P L + +++ FGVL+LE+I
Sbjct: 439 EAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIA--PEYLSTGQSSEKTDVFGFGVLILELI 496
Query: 562 SGRPPCCKD-----KGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKV--ICEVVNLC 614
+G + KG ++ W + L+ + + +VD +LK +DDL + + E+ LC
Sbjct: 497 TGHKMIDQGNGQVRKGMILSWVRT-LKAEKRFAEMVDRDLKG-EFDDLVLEEVVELALLC 554
Query: 615 VNPDITKRPSMQELCTMLEGRID 637
P RP M ++ +LEG ++
Sbjct: 555 TQPHPNLRPRMSQVLKVLEGLVE 577
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN6|Y3565_ARATH Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana GN=At3g56050 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 206/370 (55%), Gaps = 22/370 (5%)
Query: 294 LEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII-PWKKSASEKDHIYIDSEILKDVVRFSR 352
+ IV G + G +F++ TG+ KSK + PW+ S + + + V + R
Sbjct: 145 IPIVAGCIAGAVFILLLATGVFFFKSKAGKSVNPWRTGLSGQ----LQKVFITGVPKLKR 200
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVAD 411
E+E ACEDFSN+IGS P ++KGT+ G EIAV S+ + WT +E+ F++++
Sbjct: 201 SEIEAACEDFSNVIGSCPIGTLFKGTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEM 260
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
L++INH+N LLGYC E PFTR+LVF+YASNGT++EHLHY E + W R++I +GI
Sbjct: 261 LSKINHKNFVNLLGYCEEEEPFTRILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGI 320
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A L ++H L PP S L SS+V LTED++ K+ DF+ K P S
Sbjct: 321 AYCLDHMHG-LKPPIVHSNLLSSSVQLTEDYAVKIADFNFGYL------KGPSETESSTN 373
Query: 532 ICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591
I + E D N+++FG+LL E+++G+ P KG+ +D + + +
Sbjct: 374 ALIDTNISETTQED---NVHSFGLLLFELMTGKLPESVQKGDSIDTGLAVFLRGKTLREM 430
Query: 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVE---LKASS 648
VDP ++ F + ++ I EV+ C+ D +RP M+E+ L R T +S + K S
Sbjct: 431 VDPTIESFD-EKIENIGEVIKSCIRADAKQRPIMKEVTGRL--REITGLSPDDTIPKLSP 487
Query: 649 LAWAELALSS 658
L WAEL + S
Sbjct: 488 LWWAELEVLS 497
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SIZ4|Y2027_ARATH Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana GN=At2g40270 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 213/373 (57%), Gaps = 28/373 (7%)
Query: 293 TLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII-PWKKSASEKDHIYIDSEILKDVVRFS 351
++ +V G + G FL+ TGL SK + PW+ S + + + +
Sbjct: 136 SVPLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQ----LQKVFVTGIPVLK 191
Query: 352 RQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVA 410
R E+E ACEDFSN+IGS P ++KGT+ G EIAV S + W E++F++++
Sbjct: 192 RSEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKKIE 251
Query: 411 DLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470
L++INH+N LLGYC E PFTR+L+F+YA NG+L+EHLHY E + W R++I +G
Sbjct: 252 MLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIAMG 311
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+A L ++H +L PP + L SS++ LTED++ K+ DF S+ + + N T
Sbjct: 312 LAYCLDHMH-QLNPPIAHTNLVSSSLQLTEDYAVKVSDF-SFGSSETETNINNNT----- 364
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA-KDYLELPEVMS 589
++ + + A L+ + NIY+FG+LL E+I+G+ +K + VD + D+L E ++
Sbjct: 365 ---VIDTHISA--LNPEDNIYSFGLLLFEMITGKLIESVNKPDSVDSSLVDFLR-GETLA 418
Query: 590 YVVDPELKHFSYD-DLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS---VELK 645
+VDP L+ SYD ++ I EV+ C+ D +RP+MQE+ L R T +S K
Sbjct: 419 KMVDPTLE--SYDAKIENIGEVIKSCLRTDPKERPTMQEVTGWL--REITGLSPNDATPK 474
Query: 646 ASSLAWAELALSS 658
S L WAEL + S
Sbjct: 475 LSPLWWAELEVLS 487
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 170/588 (28%), Positives = 276/588 (46%), Gaps = 91/588 (15%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+ ++++SG+ G++A ELG L YL+ L L N L G IP G L RL L LG N L+
Sbjct: 549 IQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLS 608
Query: 132 GPIPPEIGNLTGL-VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
IP E+G LT L + +N+ N L+G +P LGNL LE L+L+ N+L G +PA
Sbjct: 609 ENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPAS----- 663
Query: 191 TANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNKD 248
+ +L L + + S N VG++P + + S++F GN
Sbjct: 664 ----------------IGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGN------ 701
Query: 249 PKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLT------LEIVTGTMV 302
LC + + + + H S S+ WL+ + +T ++
Sbjct: 702 -----HGLC------------NSQRSHCQPLVPH-SDSKLNWLINGSQRQKILTITCIVI 743
Query: 303 GVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEILKDVVR--------FSRQE 354
G +FL+ F GL C W E + ++ + DV+ F+ Q
Sbjct: 744 GSVFLIT-FLGL--C---------WTIKRREPAFVALEDQTKPDVMDSYYFPKKGFTYQG 791
Query: 355 LEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADL 412
L A +FS ++G VYK M GG IAV L + E + + F+ E++ L
Sbjct: 792 LVDATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNSRGEGASS--DNSFRAEISTL 849
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGI 471
+I H N KL G+C + + +L+++Y S G+L E L GE+ C + W R +I +G
Sbjct: 850 GKIRHRNIVKLYGFCYHQN--SNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGA 907
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI-LARSEKNPGTLGSQG 530
A GL YLH + P ++ S+ + L E F + DF K I L+ S+ GS G
Sbjct: 908 AEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYG 967
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC--CKDKGNLVDWA----KDYLEL 584
I P + + +IY+FGV+LLE+I+G+PP + G+LV+W ++ +
Sbjct: 968 YIA--PEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPT 1025
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
E+ +D K + ++ ++ ++ C + RP+M+E+ M+
Sbjct: 1026 IEMFDARLDTNDKR-TVHEMSLVLKIALFCTSNSPASRPTMREVVAMI 1072
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 181/635 (28%), Positives = 287/635 (45%), Gaps = 98/635 (15%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPEL 90
AL +F+ A+ + W D DPC+W G+ C RV+ +N
Sbjct: 36 ALLSFRNAVTRSDSFI-HQWRPEDPDPCNWNGVTCDAKTKRVITLN-------------- 80
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
LTY + ++G +P ++G L L++L L N L G IP +GN T L +I+LQ
Sbjct: 81 --LTY--------HKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQ 130
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
SN TG +PAE+G+L L++L + N L G +PA L L
Sbjct: 131 SNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIPAS---------------------LGQL 169
Query: 211 SQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGN---CLQNKDPKQRATTLCGGAPPART 265
+L + S NF VG IP L SF GN C ++ D + + G P + +
Sbjct: 170 KKLSNFNVSNNFLVGQIPSDGVLSGFSKNSFIGNLNLCGKHVDVVCQDDS---GNPSSHS 226
Query: 266 RAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVA--GFTG--LQRCKSKP 321
++G + K + + L I VG L LVA F G L + K
Sbjct: 227 QSGQNQKKNSGK----------------LLISASATVGALLLVALMCFWGCFLYKKLGKV 270
Query: 322 SIIIPWKKSASEKDHIYIDSEI---LKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGT 378
I K + ++ KD+++ +LE+ E+ +IIG VYK
Sbjct: 271 EIKSLAKDVGGGASIVMFHGDLPYSSKDIIK----KLEMLNEE--HIIGCGGFGTVYKLA 324
Query: 379 MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438
M G A+ + E + + +F+RE+ L I H L GYC +SP +++L+
Sbjct: 325 MDDGKVFALKRILKLNEGF----DRFFERELEILGSIKHRYLVNLRGYC--NSPTSKLLL 378
Query: 439 FDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497
+DY G+L E LH GE Q+ W R+ I+IG A+GL YLH + P ++ SS +
Sbjct: 379 YDYLPGGSLDEALHERGE--QLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNIL 436
Query: 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLL 557
L + ++ DF K +L E + T+ + + P +++ + ++Y+FGVL+
Sbjct: 437 LDGNLEARVSDFGLAK-LLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLV 495
Query: 558 LEIISGRPPCCK---DKG-NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNL 613
LE++SG+ P +KG N+V W K +L + +VDP + + L + +
Sbjct: 496 LEVLSGKRPTDASFIEKGLNVVGWLK-FLISEKRPRDIVDPNCEGMQMESLDALLSIATQ 554
Query: 614 CVNPDITKRPSMQELCTMLEGRIDTSISVELKASS 648
CV+P +RP+M + +LE + T E SS
Sbjct: 555 CVSPSPEERPTMHRVVQLLESEVMTPCPSEFYDSS 589
|
Involved in the signaling pathway that regulates cell wall function, including cellulose biosynthesis, likely via an 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated signal (a precursor of ethylene). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 274/585 (46%), Gaps = 52/585 (8%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
++ N+S +SL G + E+ LQ L L N+ IG +P ELG L +L+IL L N+ +
Sbjct: 543 LVTFNVSSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLPPELGSLHQLEILRLSENRFS 602
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE-ELHLDRNRLQGAVPAGSNSGY 190
G IP IGNLT L ++ + N +G +P +LG L SL+ ++L N G +P
Sbjct: 603 GNIPFTIGNLTHLTELQMGGNLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPP-----E 657
Query: 191 TANIHG-MYASSAN--LTG-----LCHLSQLKVADFSYNFFVGSIP--KCLEYLPSTSFQ 240
N+H MY S N L+G +LS L +FSYN G +P + + + TSF
Sbjct: 658 IGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFL 717
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GN LCGG R+ P H + +S ++ S + + + +
Sbjct: 718 GN-----------KGLCGG----HLRS-CDPSHSSWPHISSLKAGSARRGRIIIIVSSVI 761
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEI-LKDVVRFSRQELEVAC 359
L L+A R +P+ P+ +K+ + +S+I RF+ +++ A
Sbjct: 762 GGISLLLIAIVVHFLRNPVEPTA--PY---VHDKEPFFQESDIYFVPKERFTVKDILEAT 816
Query: 360 EDF--SNIIGSSPDSLVYKGTMKGGPEIAVISL---CIKEEHWTGYLELYFQREVADLAR 414
+ F S I+G VYK M G IAV L + + + F+ E+ L +
Sbjct: 817 KGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGK 876
Query: 415 INHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
I H N +L +C + +L+++Y S G+L E LH G+ + W R I +G A G
Sbjct: 877 IRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHSMDWPTRFAIALGAAEG 936
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI-LARSEKNPGTLGSQGAIC 533
L YLH + P ++ S+ + + E+F + DF K I + S+ GS G I
Sbjct: 937 LAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIA 996
Query: 534 ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC--CKDKGNLVDWAKDYLELPEVMSYV 591
P + + +IY+FGV+LLE+++G+ P + G+L W ++++ + S +
Sbjct: 997 --PEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEI 1054
Query: 592 VDPELKHFSYD----DLKVICEVVNLCVNPDITKRPSMQELCTML 632
+DP L D + + ++ LC + RP+M+E+ ML
Sbjct: 1055 LDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLML 1099
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 276/599 (46%), Gaps = 51/599 (8%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+++I++S + L G + L LT L L L GN L G IPKE+G +L+ L+L NQL
Sbjct: 606 LVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLN 665
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
G IP G L LVK+NL N L G +PA LGNL L + L N L G + S
Sbjct: 666 GHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSGEL--SSELSTM 723
Query: 192 ANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ G+Y TG L +L+QL+ D S N G IP + LP+ F N +N
Sbjct: 724 EKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGLPNLEFL-NLAKN 782
Query: 247 KDPKQRATTLCGGAPPARTRAGLSPKHQ-----AAEDVSKHQSASRPAWLLTLEIVTGTM 301
R G ++A LS + D + R AW + ++ T+
Sbjct: 783 N---LRGEVPSDGVCQDPSKALLSGNKELCGRVVGSDCKIEGTKLRSAWGIAGLMLGFTI 839
Query: 302 VGVLFLVA----GFTGLQRCKSKPSIIIPWKKSASEKDHIYIDS------EILKDVVRFS 351
+ +F+ + T + + P + + ++Y S + ++ F
Sbjct: 840 IVFVFVFSLRRWAMTKRVKQRDDPERMEESRLKGFVDQNLYFLSGSRSREPLSINIAMFE 899
Query: 352 RQELEV-------ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLE 402
+ L+V A + FS NIIG VYK + G +AV L E G E
Sbjct: 900 QPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKL--SEAKTQGNRE 957
Query: 403 LYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL--HYGERCQVS 460
F E+ L ++ H N LLGYC S ++LV++Y NG+L L G +
Sbjct: 958 --FMAEMETLGKVKHPNLVSLLGYCSFSE--EKLLVYEYMVNGSLDHWLRNQTGMLEVLD 1013
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
W++R+KI +G ARGL +LH P ++ +S + L DF PK+ DF + I A E
Sbjct: 1014 WSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISA-CE 1072
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD-----KGNLV 575
+ T+ + I P ++ +G++Y+FGV+LLE+++G+ P D GNLV
Sbjct: 1073 SHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLV 1132
Query: 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKV-ICEVVNLCVNPDITKRPSMQELCTMLE 633
WA + + + V+DP L + + ++ + ++ LC+ KRP+M ++ L+
Sbjct: 1133 GWAIQKINQGKAVD-VIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190
|
Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 658 | ||||||
| 225426379 | 660 | PREDICTED: probable LRR receptor-like se | 1.0 | 0.996 | 0.792 | 0.0 | |
| 255537421 | 690 | receptor kinase, putative [Ricinus commu | 0.996 | 0.950 | 0.783 | 0.0 | |
| 225426381 | 654 | PREDICTED: probable LRR receptor-like se | 0.990 | 0.996 | 0.787 | 0.0 | |
| 147800397 | 636 | hypothetical protein VITISV_020977 [Viti | 0.963 | 0.996 | 0.760 | 0.0 | |
| 356497232 | 662 | PREDICTED: probable LRR receptor-like se | 1.0 | 0.993 | 0.744 | 0.0 | |
| 356528148 | 661 | PREDICTED: probable LRR receptor-like se | 1.0 | 0.995 | 0.739 | 0.0 | |
| 356540452 | 662 | PREDICTED: probable LRR receptor-like se | 1.0 | 0.993 | 0.737 | 0.0 | |
| 224053933 | 646 | predicted protein [Populus trichocarpa] | 0.977 | 0.995 | 0.767 | 0.0 | |
| 356511498 | 633 | PREDICTED: probable LRR receptor-like se | 0.951 | 0.988 | 0.755 | 0.0 | |
| 357481643 | 661 | hypothetical protein MTR_5g010440 [Medic | 0.983 | 0.978 | 0.718 | 0.0 |
| >gi|225426379|ref|XP_002271860.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform 2 [Vitis vinifera] gi|297742540|emb|CBI34689.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/660 (79%), Positives = 583/660 (88%), Gaps = 2/660 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KINISGSSLKGFL PELG L+ LQELILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + S + ++++GMYASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 181 TVPGSNTSNFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ PKHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 241 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGT 300
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 301 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 360
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 361 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 420
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 421 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 480
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS 538
HTEL PPFTISELNSSAVY+TEDFSPKLVDF+SWK+IL+RSEKN G++GSQGAIC+LP+S
Sbjct: 481 HTELDPPFTISELNSSAVYITEDFSPKLVDFESWKSILSRSEKNSGSIGSQGAICVLPNS 540
Query: 539 LEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598
LE RHLDVQGN+YAFGVLLLEI+SGRPP CKDKG LV+WA+DYL+LPE MSYVVDPELKH
Sbjct: 541 LEGRHLDVQGNVYAFGVLLLEIMSGRPPYCKDKGCLVEWARDYLDLPEAMSYVVDPELKH 600
Query: 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELALSS 658
F YDDLKVICEVVNLC++P+ TKRPSMQELCTMLE +IDTSIS ELKASSLAWAELALSS
Sbjct: 601 FRYDDLKVICEVVNLCIHPEPTKRPSMQELCTMLETKIDTSISSELKASSLAWAELALSS 660
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255537421|ref|XP_002509777.1| receptor kinase, putative [Ricinus communis] gi|223549676|gb|EEF51164.1| receptor kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/662 (78%), Positives = 582/662 (87%), Gaps = 6/662 (0%)
Query: 1 MRSYSSL-ELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH 59
MRS++ L +LLFV++ VLF C +F +E ALTTFKEAI+EDP LVLSNWN LD+DPC
Sbjct: 1 MRSHTPLVQLLFVIASVLFVVCESFPKDEVEALTTFKEAIFEDPLLVLSNWNTLDSDPCD 60
Query: 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR 119
W+GIACS ARDRV+KINI+G+SL+GF+ PELG +TYLQEL+LHGNNLIG IPKELG+LK
Sbjct: 61 WSGIACSFARDRVMKINITGASLRGFIPPELGRITYLQELVLHGNNLIGPIPKELGMLKY 120
Query: 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
LK+LDLG NQLTGPIPPEI NL +++INLQSNGLTG LP ELG L LEEL LDRNRLQ
Sbjct: 121 LKVLDLGVNQLTGPIPPEIANLNNVMRINLQSNGLTGHLPPELGTLKYLEELRLDRNRLQ 180
Query: 180 GAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
G VPAG NS + +N HGMYAS N +GLC SQLKVAD SYNFFVGSIPKCL+YLPSTSF
Sbjct: 181 GTVPAGGNSDFPSNAHGMYAS--NSSGLCQASQLKVADLSYNFFVGSIPKCLKYLPSTSF 238
Query: 240 QGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSK-HQSASRPAWLLTLEIVT 298
QGNCL NKDPKQR+ CGGAPPAR + KHQ AEDVSK HQ AS+PAWLL LEIVT
Sbjct: 239 QGNCLHNKDPKQRSAAQCGGAPPARAHQTFNSKHQPAEDVSKQHQGASKPAWLLALEIVT 298
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA T QRC SK SIIIPWKKSAS+ DH +YIDSE+LKDV RFSRQELE
Sbjct: 299 GTMVGSLFLVAVLTAFQRCNSKSSIIIPWKKSASQNDHMAVYIDSEMLKDVARFSRQELE 358
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGS PDSLVYKG +KGGPEIAVISLCIKEEHWTGYLELYFQ+EVADLAR++
Sbjct: 359 VACEDFSNIIGSCPDSLVYKGNIKGGPEIAVISLCIKEEHWTGYLELYFQKEVADLARLD 418
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HENTGKLLGYCRES+PFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI++GIARGLK
Sbjct: 419 HENTGKLLGYCRESNPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIILGIARGLK 478
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
YLHTEL PPFTISELNSSAVYLTEDFSPK+VDF+SWK+I++RSEKN G++GSQGAIC+LP
Sbjct: 479 YLHTELDPPFTISELNSSAVYLTEDFSPKVVDFESWKSIVSRSEKNSGSIGSQGAICVLP 538
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596
S+E RHLDVQGN+YAFGVLLLEIISGRPP CK+KG LVDWAK+YLE+PEVMSYVVDPEL
Sbjct: 539 DSMEGRHLDVQGNVYAFGVLLLEIISGRPPYCKEKGCLVDWAKEYLEMPEVMSYVVDPEL 598
Query: 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELAL 656
KHF Y+D+KVICEVV+LC++P+ KRPSM+E+ LE RIDTS+SVELKASSLAWAELAL
Sbjct: 599 KHFQYEDVKVICEVVSLCIHPEPRKRPSMEEISRTLESRIDTSVSVELKASSLAWAELAL 658
Query: 657 SS 658
SS
Sbjct: 659 SS 660
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426381|ref|XP_002271829.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/660 (78%), Positives = 575/660 (87%), Gaps = 8/660 (1%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KINISGSSLKGFL PELG L+ LQELILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKINISGSSLKGFLTPELGQLSSLQELILHGNNLIGVIPKEIGSLKNL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + YASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 181 TVPVFHKK------NKKYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 234
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ PKHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 235 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGPKHQPTLDGPKHQDTSKPAWLLALEIVTGT 294
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 295 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 354
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 355 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 414
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 415 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 474
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS 538
HTEL PPFTISELNSSAVY+TEDFSPKLVDF+SWK+IL+RSEKN G++GSQGAIC+LP+S
Sbjct: 475 HTELDPPFTISELNSSAVYITEDFSPKLVDFESWKSILSRSEKNSGSIGSQGAICVLPNS 534
Query: 539 LEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598
LE RHLDVQGN+YAFGVLLLEI+SGRPP CKDKG LV+WA+DYL+LPE MSYVVDPELKH
Sbjct: 535 LEGRHLDVQGNVYAFGVLLLEIMSGRPPYCKDKGCLVEWARDYLDLPEAMSYVVDPELKH 594
Query: 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELALSS 658
F YDDLKVICEVVNLC++P+ TKRPSMQELCTMLE +IDTSIS ELKASSLAWAELALSS
Sbjct: 595 FRYDDLKVICEVVNLCIHPEPTKRPSMQELCTMLETKIDTSISSELKASSLAWAELALSS 654
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800397|emb|CAN66410.1| hypothetical protein VITISV_020977 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/660 (76%), Positives = 561/660 (85%), Gaps = 26/660 (3%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRS SSL+LL+V+ GVLFA+C+AFA+NE AL T KE IYEDP VLS WN +D+DPC W
Sbjct: 1 MRSSSSLQLLWVVFGVLFASCDAFASNEVSALNTLKEGIYEDPLTVLSTWNTVDSDPCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI CS+ARD V+KI ILHGNNLIG+IPKE+G LK L
Sbjct: 61 SGITCSEARDHVIKI------------------------ILHGNNLIGVIPKEIGSLKNL 96
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT +VKINL+SNGL+GRLP ELGNL LEEL LDRNRL+G
Sbjct: 97 KVLDLGMNQLTGPIPPEIGNLTSIVKINLESNGLSGRLPPELGNLRHLEELRLDRNRLEG 156
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VP + S + ++++GMYASS N+TGLC SQ KVADFSYNFFVGSIPKCL YLP TSFQ
Sbjct: 157 TVPGSNTSSFVSDVNGMYASSRNITGLCRSSQFKVADFSYNFFVGSIPKCLSYLPRTSFQ 216
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGT 300
GNCLQ+ P+QR+T C PPA++ G+ KHQ D KHQ S+PAWLL LEIVTGT
Sbjct: 217 GNCLQDTAPRQRSTVQCAVPPPAKSHPGVGXKHQPTLDGPKHQDTSKPAWLLALEIVTGT 276
Query: 301 MVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEVA 358
MVG L ++A T LQRCKSK SIIIPWKKSASEK+H +YIDSE+LKDV RFSRQELEVA
Sbjct: 277 MVGSLCIIALLTALQRCKSKSSIIIPWKKSASEKEHMQVYIDSEMLKDVFRFSRQELEVA 336
Query: 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418
CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW GYLELYFQ+EVADLAR+NHE
Sbjct: 337 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWMGYLELYFQKEVADLARLNHE 396
Query: 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHYGE CQ+SWTRRMKI+IGI RGLKYL
Sbjct: 397 NTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIGRGLKYL 456
Query: 479 HTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS 538
HTEL PPFTISELNSSAVY+TEDFSPKLVDF+SWK+IL+RSEKN G++GSQGAIC+LP+S
Sbjct: 457 HTELDPPFTISELNSSAVYITEDFSPKLVDFESWKSILSRSEKNSGSIGSQGAICVLPNS 516
Query: 539 LEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598
LE RHLDVQGN+YAFGVLLLEI+SGRPP CKDKG LV+WA+DYL+LPE MSYVVDPELKH
Sbjct: 517 LEGRHLDVQGNVYAFGVLLLEIMSGRPPYCKDKGCLVEWARDYLDLPEAMSYVVDPELKH 576
Query: 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELALSS 658
F YDDLKVICEVVNLC++P+ TKRPSMQELCTMLE +IDTSIS ELKASSLAWAELALSS
Sbjct: 577 FRYDDLKVICEVVNLCIHPEPTKRPSMQELCTMLETKIDTSISSELKASSLAWAELALSS 636
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497232|ref|XP_003517466.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/662 (74%), Positives = 560/662 (84%), Gaps = 4/662 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ + L L +S + F + +NE WAL +FKEA+YEDP+ VLSNW+ +++DPC+W
Sbjct: 1 MKPCTLLLFLSFISTLSFVVSDTVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G+ C+ RD V+K+NISGSSLKGFLAPELG +TYLQ LILHGNN IG IP+ELG+L+ L
Sbjct: 61 FGVLCTMVRDHVIKLNISGSSLKGFLAPELGQITYLQALILHGNNFIGTIPRELGVLESL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT VKINLQSNGLTGRLP ELGNL L+EL LDRNRLQG
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTQAVKINLQSNGLTGRLPPELGNLRYLQELRLDRNRLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+PAG +S + +N+HGMYAS N+TG C SQLKVADFS+NF VG IPKCLEYLP SFQ
Sbjct: 181 PIPAGGSSNFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGRIPKCLEYLPRLSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPA--RTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNCLQ ++ KQR++ C GA PA +++ ++P HQ AE VSKH AS+P WLL LEIVT
Sbjct: 241 GNCLQGQELKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVT 300
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA QRC K SIIIPWKKS S+KDH +YID E LKDV R+SRQELE
Sbjct: 301 GTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEFLKDVRRYSRQELE 360
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR+N
Sbjct: 361 VACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLN 420
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HEN GKLLGYCRE +PFTRMLVFDYASNGTL++HLHY E CQ SWTRRMKI IGIARGLK
Sbjct: 421 HENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHYEEGCQFSWTRRMKIAIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
YLHTE+ PPFTISELNSSAVYLTE+FSPKLVDF+SWKTIL RSEKN G++GSQGAIC+LP
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLP 540
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596
+SLEARHLD +GNI+AFGVLLLEIISGRPP CKDKG LVDWAKDYLE+P+ MS VVDPE+
Sbjct: 541 NSLEARHLDTKGNIFAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPDEMSCVVDPEM 600
Query: 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELAL 656
K F Y+DLKVICEV+ LCVNPD T RPSM+ELC+MLE RIDTS+SVELK+SSLAWAELAL
Sbjct: 601 KFFRYEDLKVICEVITLCVNPDTTVRPSMRELCSMLESRIDTSVSVELKSSSLAWAELAL 660
Query: 657 SS 658
S
Sbjct: 661 LS 662
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528148|ref|XP_003532667.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/661 (73%), Positives = 573/661 (86%), Gaps = 3/661 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ Y+SL LL ++S + F + E AL TFKEA+YEDPH+VLSNWN LD+D C W
Sbjct: 1 MKLYTSLLLLGLVSMLSFVASVMIPSGEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G++C+ RD V+K+N+SG+SL+GFLAPE G +TYLQELILHGN+LIG+IPKELG+L L
Sbjct: 61 NGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLNSL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIPPEIGNLT ++KINLQSNGLTGRLP ELG L L+EL LDRN+LQG
Sbjct: 121 KVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
++P G +S +++N+HGMYAS N+TG C LSQLKVADFSYNFFVGSIPKCL YLP +SFQ
Sbjct: 181 SLPGGGSSNFSSNMHGMYASGVNMTGFCRLSQLKVADFSYNFFVGSIPKCLAYLPRSSFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH-QAAEDVSKHQSASRPAWLLTLEIVTG 299
GNCL KD KQR + C GA PA++ ++P++ A + V+KHQ AS+PAWLL LEIVTG
Sbjct: 241 GNCLHIKDIKQRISVQCAGASPAQSGPVVNPRYLPATKHVTKHQEASKPAWLLALEIVTG 300
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEV 357
TMVG LF++A + +QRC +KPSIIIPWKKSAS KD+ ++IDSE+LKDV+ +SRQ+LEV
Sbjct: 301 TMVGSLFIIAILSAIQRCNNKPSIIIPWKKSASGKDYMAVHIDSEMLKDVMSYSRQDLEV 360
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKE++WTGYLELYFQREVADLAR+NH
Sbjct: 361 ACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEDNWTGYLELYFQREVADLARLNH 420
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
+NTGKLLGYCRESSPFTRMLVF+YASNGTLYEHLHY E CQ+SWTRRMKI+IGIARGLKY
Sbjct: 421 DNTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYEEGCQLSWTRRMKIIIGIARGLKY 480
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
LHTE+ P FTISELNS+AVYLTEDFSPKLVDF+SWKTIL RSEKN G + SQGA+C+LP+
Sbjct: 481 LHTEIEPAFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGNVSSQGAVCVLPN 540
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597
SLEAR LD +GNIYAF VLLLEIISGRPP CKDKG LVDWA+DYLE+PEVMSYVVDPELK
Sbjct: 541 SLEARRLDTKGNIYAFAVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVDPELK 600
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELALS 657
HF Y+DLK ICEV+ LC+NPD + RPSM+ELCTMLE +IDT+I++ELKASSLAWAELALS
Sbjct: 601 HFRYEDLKAICEVITLCINPDHSVRPSMRELCTMLESKIDTTINLELKASSLAWAELALS 660
Query: 658 S 658
S
Sbjct: 661 S 661
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540452|ref|XP_003538703.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/662 (73%), Positives = 563/662 (85%), Gaps = 4/662 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ +SL L ++S + F + +NE WAL +FKEA+YEDP+ VLSNW+ +++DPC+W
Sbjct: 1 MKPCTSLLFLALISALSFVVSDMVPSNEVWALRSFKEAVYEDPYQVLSNWDTVESDPCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G+ C+ RD V+K+NISGSSLKGFLAPELG +TYLQELILHGN+ IG IP+ELG+L+ L
Sbjct: 61 FGVLCTMLRDHVIKLNISGSSLKGFLAPELGQITYLQELILHGNSFIGTIPRELGVLESL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
K+LDLG NQLTGPIP EIGNLT +VKINLQSNGLTGRLP ELGNL L+EL LDRNRLQG
Sbjct: 121 KVLDLGMNQLTGPIPAEIGNLTQVVKINLQSNGLTGRLPPELGNLRYLQELQLDRNRLQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VPAG ++ + +N+HGMYAS N+TG C SQLKVADFS+NF VGSIPKCLEYLP +FQ
Sbjct: 181 PVPAGGSANFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGSIPKCLEYLPRLNFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPA--RTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
GNCLQ +D KQR++ C GA PA +++ ++P HQ AE VSKH AS+P WLL LEIVT
Sbjct: 241 GNCLQGQDLKQRSSIQCAGASPASAKSQPVVNPNHQPAEYVSKHHRASKPVWLLALEIVT 300
Query: 299 GTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELE 356
GTMVG LFLVA QRC K SIIIPWKKS S+KDH +YID E+LKDV R+SRQELE
Sbjct: 301 GTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPELLKDVRRYSRQELE 360
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNIIGSSPDS+VYKGTMKGGPEIAV+SLCI EEHWTGYLELYFQREVADLAR++
Sbjct: 361 VACEDFSNIIGSSPDSVVYKGTMKGGPEIAVVSLCINEEHWTGYLELYFQREVADLARLD 420
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
+EN GKLLGYCRE +PFTRMLVFDYASNGTL++HLHY E CQ SWTRRMKI IGIARGLK
Sbjct: 421 NENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHYEEGCQFSWTRRMKIAIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
YLHTE+ PPFTISELNSSAVYLTE+FSPKLVDF+SWKTIL RSEKN G++GSQG +CILP
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGGVCILP 540
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596
+SLEARHLD +GN +AFGVLLLEIISGRPP CKDKG LVDWAKDYLE+P+ MS+VVDPEL
Sbjct: 541 NSLEARHLDTKGNTFAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPDEMSHVVDPEL 600
Query: 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELAL 656
K F Y+DLKVICEV+ LC+NPD T RPSM+ELC+MLE RIDTS+SVELK+SSLAWAELAL
Sbjct: 601 KIFRYEDLKVICEVITLCINPDTTVRPSMRELCSMLESRIDTSVSVELKSSSLAWAELAL 660
Query: 657 SS 658
S
Sbjct: 661 LS 662
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053933|ref|XP_002298045.1| predicted protein [Populus trichocarpa] gi|222845303|gb|EEE82850.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1020 bits (2638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/661 (76%), Positives = 573/661 (86%), Gaps = 18/661 (2%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
MRSY+SL+LL V S +LF TC+ FA +E WALT FKEAIYEDPH+VLS+WNALDADPC W
Sbjct: 1 MRSYASLQLLSVFSLLLFVTCDPFARDEVWALTAFKEAIYEDPHMVLSSWNALDADPCGW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
+GI+CS A D V+KINI+G SL+GFLAPELG + +LQ+LILHGNNLIGIIPKELG+LK L
Sbjct: 61 SGISCSFAGDHVVKINITGYSLRGFLAPELGQIKFLQQLILHGNNLIGIIPKELGMLKYL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
++LDLG NQLTGPIPPEI NL ++KINLQSNGLTG LP ELGNL SL+EL LDRNR QG
Sbjct: 121 QVLDLGANQLTGPIPPEIANLISVIKINLQSNGLTGSLPPELGNLKSLQELRLDRNRFQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+VPA S+S +T++ YAS+ NLTGLC S+LKVADFSYNFF GSIPKCL YLPSTSFQ
Sbjct: 181 SVPASSSSDFTSS---AYASNTNLTGLCQASELKVADFSYNFFTGSIPKCLGYLPSTSFQ 237
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVS-KHQSASRPAWLLTLEIVTG 299
GNCLQNKD +QR+++LCG AED+S +H AS+PAWLL LEIVTG
Sbjct: 238 GNCLQNKDLRQRSSSLCG------------TYEMPAEDLSNQHPRASKPAWLLALEIVTG 285
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHI--YIDSEILKDVVRFSRQELEV 357
TMVG LFL+A T LQRCK K S+IIPWKKS+S+KDH+ YIDSE+LKDVVRFSR ELEV
Sbjct: 286 TMVGCLFLIAFITALQRCKDKSSLIIPWKKSSSQKDHVTVYIDSEMLKDVVRFSRMELEV 345
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDSLVYKGT+KGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR+N+
Sbjct: 346 ACEDFSNIIGSSPDSLVYKGTVKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNN 405
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
EN GKLLGYC ES+PFTRMLVF+YASNGTLYEHLHYGE CQ++WTRRMKI+IGIARGLKY
Sbjct: 406 ENAGKLLGYCSESTPFTRMLVFEYASNGTLYEHLHYGEGCQLTWTRRMKIIIGIARGLKY 465
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
H EL PPFTISELNSS+VYLTEDFSPKLVDF+SWK+ILARSEKN G++G QGAIC+LP+
Sbjct: 466 FHAELDPPFTISELNSSSVYLTEDFSPKLVDFESWKSILARSEKNSGSIGGQGAICVLPN 525
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597
SLE RHLDVQGNIYAFGVLLLEIISGRPP CKDKG LVDWAKD+LELPE M+YVVDPELK
Sbjct: 526 SLEGRHLDVQGNIYAFGVLLLEIISGRPPHCKDKGRLVDWAKDFLELPEAMAYVVDPELK 585
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELALS 657
HF ++DL VICEVVNLC++PD K+PSMQEL T+LE RIDT+I + KASSLAWAELALS
Sbjct: 586 HFRFEDLNVICEVVNLCIHPDPAKQPSMQELSTILESRIDTTIPADFKASSLAWAELALS 645
Query: 658 S 658
S
Sbjct: 646 S 646
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511498|ref|XP_003524463.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/635 (75%), Positives = 558/635 (87%), Gaps = 9/635 (1%)
Query: 27 NEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFL 86
NE AL TFKEA+YEDPH+VLSNWN LD+D C W G++C+ RD V+K+N+SG+SL+GFL
Sbjct: 5 NEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFL 64
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
APE G +TYLQELILHGN+LIG+IPKELG+LK LK+LDLG NQLTGPIPPEIGNLT ++K
Sbjct: 65 APEFGKITYLQELILHGNSLIGVIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNLTQVMK 124
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
INLQSNGLTGRLP ELG L L+EL LDRN+LQG++P G +S +++N+HGMYAS NLTG
Sbjct: 125 INLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNLTG 184
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTR 266
C SQLKVADFS NFFVGSIPKCL YLP +SFQGNCL KD KQR + C GA
Sbjct: 185 FCRSSQLKVADFSCNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRTSVQCAGA------ 238
Query: 267 AGLSPKHQ-AAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIII 325
+ ++PK+Q A + V+KHQ AS+PAWLL LEIVTGTMVG LF++A T +QRC +K SIII
Sbjct: 239 SVVNPKYQPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILTAIQRCNNKSSIII 298
Query: 326 PWKKSASEKDH--IYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGP 383
PWKKSAS KD+ ++IDSE+LKDV+R+SRQ+LEVACEDFSNIIGSSPDS+VYKGTMKGGP
Sbjct: 299 PWKKSASGKDYMAVHIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGP 358
Query: 384 EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443
EIAVISLCI+E++WTGYLELYFQREVADLAR+NH+NTGKLLGYCRES+PFTRMLVF+YAS
Sbjct: 359 EIAVISLCIREDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESNPFTRMLVFEYAS 418
Query: 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
NGTLYEHLHY E CQ+SWTRRMKI+IGIARGLKYLHTE+ PPFTISELNS+AVYLTEDFS
Sbjct: 419 NGTLYEHLHYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFS 478
Query: 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISG 563
PKLVDF+SWKTIL RSE+N G + SQGA+C+LP++LEAR LD +GNIYAF VLLLEIISG
Sbjct: 479 PKLVDFESWKTILERSERNSGNVSSQGAVCVLPNTLEARRLDTKGNIYAFAVLLLEIISG 538
Query: 564 RPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRP 623
RPP CKDKG LVDWA+DYLE+PEVMSYVVDPELKHF Y+DLK ICEV+ LC++PD + RP
Sbjct: 539 RPPYCKDKGYLVDWARDYLEMPEVMSYVVDPELKHFRYEDLKAICEVITLCISPDPSVRP 598
Query: 624 SMQELCTMLEGRIDTSISVELKASSLAWAELALSS 658
SM+ELCTMLE RIDT+I++ELKASSLAWAELALSS
Sbjct: 599 SMRELCTMLESRIDTTINLELKASSLAWAELALSS 633
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357481643|ref|XP_003611107.1| hypothetical protein MTR_5g010440 [Medicago truncatula] gi|355512442|gb|AES94065.1| hypothetical protein MTR_5g010440 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/651 (71%), Positives = 547/651 (84%), Gaps = 4/651 (0%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
M+ +S +L ++S + + +NE WALT+FKEAIYEDP+LVLSNWN L++D C+W
Sbjct: 1 MKFLASFLVLSLISTISLVNSDTLPSNEVWALTSFKEAIYEDPNLVLSNWNMLESDLCNW 60
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120
G++C+ A D V+K+NISGSSLKGFLA ELG +TYL+ELILHGNNLIG IPKEL +LK L
Sbjct: 61 FGVSCTLAGDHVIKLNISGSSLKGFLAKELGQITYLEELILHGNNLIGTIPKELCVLKSL 120
Query: 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
++LDLG NQLTGPIPPEIGNL LV INLQSNGLTGR+P E GNL L+EL LDRN+ QG
Sbjct: 121 EVLDLGMNQLTGPIPPEIGNLALLVNINLQSNGLTGRIPHEFGNLRYLKELRLDRNKFQG 180
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
VPA +S + +N HGMYAS+ N+TG+C QL+VADFSYNF VGSIPKCLE+LP +FQ
Sbjct: 181 PVPASGSSNFASNTHGMYASNENVTGICRSPQLEVADFSYNFLVGSIPKCLEFLPRLNFQ 240
Query: 241 GNCLQNKDPKQRATTLCGGAPPARTRAGLSPK-HQAAEDVSKHQSASRPAWLLTLEIVTG 299
GNCLQ+ DPKQR +T CGGA PA+++ + + HQ V KH S P WLL LEIV G
Sbjct: 241 GNCLQSNDPKQRPSTQCGGASPAKSQPVVDHQFHQLGNHVRKHHGLSEPTWLLALEIVAG 300
Query: 300 TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDH--IYIDSEILKDVVRFSRQELEV 357
TMVG + L+A QRC +K SIIIPWKKSAS+K H +YID EILKDV R+SRQELE
Sbjct: 301 TMVGSVCLIAILAAFQRCNNKSSIIIPWKKSASQKYHTAVYIDPEILKDVRRYSRQELEE 360
Query: 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ACEDFSNIIGSSPDS+VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA+LAR+NH
Sbjct: 361 ACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNH 420
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLK 476
ENTGKLLGYCRES+PF+RMLVFDYASNGTL+EHLH Y E CQ SWTRRMKI+IGIARGLK
Sbjct: 421 ENTGKLLGYCRESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIIIGIARGLK 480
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
YLHTE+ PPFTISELNSSAVYLTE+F+PKLVDF+SWKTIL RSEKN G++ SQGA+C+LP
Sbjct: 481 YLHTEVEPPFTISELNSSAVYLTEEFAPKLVDFESWKTILERSEKNSGSISSQGAVCVLP 540
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596
+SLEARHLD +GNI+AFGVLLLEIISGRPP CK+KG LVDWAKDYLE PEVMS++V+ EL
Sbjct: 541 NSLEARHLDTKGNIHAFGVLLLEIISGRPPYCKEKGYLVDWAKDYLEKPEVMSHLVNSEL 600
Query: 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKAS 647
K++ +DDLKVICEV+ LC+NPD T RPSMQELC+MLE RIDTS+S +LK+S
Sbjct: 601 KNYRHDDLKVICEVITLCINPDTTVRPSMQELCSMLESRIDTSVSADLKSS 651
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 658 | ||||||
| TAIR|locus:2163056 | 664 | AT5G41180 [Arabidopsis thalian | 0.946 | 0.938 | 0.553 | 3.9e-186 | |
| TAIR|locus:2124102 | 678 | MRH1 "morphogenesis of root ha | 0.533 | 0.517 | 0.357 | 7.6e-74 | |
| TAIR|locus:2182915 | 553 | AT5G07150 [Arabidopsis thalian | 0.559 | 0.665 | 0.311 | 1.2e-56 | |
| TAIR|locus:2171233 | 484 | AT5G58540 [Arabidopsis thalian | 0.323 | 0.440 | 0.411 | 2.9e-52 | |
| TAIR|locus:2078436 | 499 | AT3G56050 [Arabidopsis thalian | 0.533 | 0.703 | 0.345 | 1.3e-50 | |
| TAIR|locus:2206179 | 592 | FEI1 "FEI 1" [Arabidopsis thal | 0.422 | 0.469 | 0.303 | 3.2e-49 | |
| TAIR|locus:2063146 | 489 | AT2G40270 [Arabidopsis thalian | 0.553 | 0.744 | 0.348 | 2.3e-48 | |
| TAIR|locus:2013021 | 625 | SERK1 "somatic embryogenesis r | 0.436 | 0.459 | 0.324 | 9.4e-48 | |
| TAIR|locus:2026097 | 628 | SERK2 "somatic embryogenesis r | 0.436 | 0.457 | 0.318 | 3.2e-46 | |
| TAIR|locus:2036636 | 632 | NIK3 "NSP-interacting kinase 3 | 0.436 | 0.454 | 0.322 | 4.4e-45 |
| TAIR|locus:2163056 AT5G41180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1805 (640.5 bits), Expect = 3.9e-186, P = 3.9e-186
Identities = 362/654 (55%), Positives = 456/654 (69%)
Query: 1 MRSYSSLELLFVLSGVLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHW 60
+ S L L+ ++ G LF +C+AFA+ E A+ FKEAIY+DP LV+SNWN + PC W
Sbjct: 5 LSSTMQLSLMSLVLGFLFVSCDAFASKEVEAVRRFKEAIYKDPLLVMSNWNVPNLSPCDW 64
Query: 61 TGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQEXXXXXXXXXXXXPXXXXXXXXX 120
GI CS ++D ++KINISG+S++GFL PELG +TYLQE P
Sbjct: 65 NGIKCSPSKDHIIKINISGTSMRGFLVPELGQITYLQELILRGNILMGTIPKEIGKLKKL 124
Query: 121 XXXXXGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
G N LTGPIP EIG L+ + INLQSNGL G+LP E+GNL L+EL + RNRL+G
Sbjct: 125 KILDLGNNHLTGPIPAEIGKLSRIKTINLQSNGLIGKLPPEIGNLKHLKELLIGRNRLRG 184
Query: 181 AVPAGSNSGYTANIHGMYAS--SANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
++P + + YAS SAN++GLC S KVADFSYNFF G +P CL+YLP TS
Sbjct: 185 SIPIAAKTSKK------YASNPSANISGLCKSSLFKVADFSYNFFEGRVPSCLDYLPITS 238
Query: 239 FQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVT 298
FQGNC++ D KQR + C AR ++ K KH+ ASR WL EIVT
Sbjct: 239 FQGNCMKTMDVKQRPLSEC-----ARLAVTVAKK--------KHR-ASRQTWLRNFEIVT 284
Query: 299 GTMVGVLFLVAGFTGLQRCXXXXXXXXXXXXXXXEKDH--IYIDSEILKDVVRFSRQELE 356
G+ VG+LFLV F+ C EK+ +Y+DSE+LKDV R++RQELE
Sbjct: 285 GSSVGLLFLVVMFSACSLCKIKRSLIVPWKKSASEKEKFTVYVDSEMLKDVSRYTRQELE 344
Query: 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
VACEDFSNII SS +S +YKGT+KGG EIAVISLC+KEE+WTGYLEL FQREVA LAR+N
Sbjct: 345 VACEDFSNIIDSSAESQIYKGTIKGGTEIAVISLCVKEENWTGYLELNFQREVAALARLN 404
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
HEN GKLLGYC+ES+PFTRMLVF+YASNGTLY+HLHY + VSW +RMKIVIGIARGLK
Sbjct: 405 HENAGKLLGYCKESTPFTRMLVFEYASNGTLYDHLHYADGSLVSWAKRMKIVIGIARGLK 464
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
YLHTEL PPFT+SEL+S+AVYLTEDF+PKLVDF+ WK I RSEKN + ++GAIC+LP
Sbjct: 465 YLHTELHPPFTVSELSSTAVYLTEDFTPKLVDFECWKIIQVRSEKNLKNICNEGAICVLP 524
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY-LELPEVMSYVVDPE 595
+++E R +D+QGNIY+FG+LLLEI+SGRP C+D+G LV+W ++ L P+VM+ +VDPE
Sbjct: 525 NAMEHRDMDLQGNIYSFGILLLEIVSGRPSYCQDRGCLVEWVREKNLGAPDVMASLVDPE 584
Query: 596 LKHFSYDDLKVICEVVNLCVNPDITKRP------SMQELCTMLEGRIDTSISVE 643
LKHF +L+ +CEV + C+N D ++ S+Q LC LE RI SIS E
Sbjct: 585 LKHFKQKELEAVCEVASQCLNLDQNEKDKDKLSCSIQALCETLESRITVSISAE 638
|
|
| TAIR|locus:2124102 MRH1 "morphogenesis of root hair 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 135/378 (35%), Positives = 209/378 (55%)
Query: 262 PARTRAGLSP---KHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAG-FTGLQRC 317
P+ + SP K+Q ++ K S+ WL + I + VG+L +VA F +R
Sbjct: 292 PSPDKGSTSPDISKNQPQDN--KQSKGSKHVWLYVV-IAVASFVGLLIIVAVIFFCRKRA 348
Query: 318 XXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKG 377
+K + V + +R ELE ACEDFSNII + VYKG
Sbjct: 349 VKSIGPWKTGLSGQLQKAFV-------TGVPKLNRSELETACEDFSNIIETFDGYTVYKG 401
Query: 378 TMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436
T+ G EIAV S I E + WT +E+ ++R++ L+RINH+N L+GYC E PF RM
Sbjct: 402 TLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRM 461
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
+VF+YA NGTL+EHLH E + W+ RM+I++G A L+++H + PP ++ NSS +
Sbjct: 462 MVFEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEI 520
Query: 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGS-QGAICILPSSLEARHLDVQGNIYAFGV 555
YLT+D++ K+ + + AR G + +LP EA N+++FGV
Sbjct: 521 YLTDDYAAKVSEIPF--NLEARLNPKKHVSGDLEQTSLLLPPEPEA-------NVHSFGV 571
Query: 556 LLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCV 615
L+LEIISG+ + G++ WA YLE + + ++DP LK F ++L+VIC+V+ C+
Sbjct: 572 LMLEIISGKLSFSDEYGSIEQWASKYLEKDD-LGEMIDPSLKTFKEEELEVICDVIRECL 630
Query: 616 NPDITKRPSMQELCTMLE 633
+ +RPSM+++ L+
Sbjct: 631 KTEQRQRPSMKDVAEQLK 648
|
|
| TAIR|locus:2182915 AT5G07150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 405 (147.6 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 127/408 (31%), Positives = 191/408 (46%)
Query: 144 LVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-------GYTANIHG 196
+V +NL+ L G L ELGNL L+ L L N G VP N G
Sbjct: 77 VVILNLRDLSLQGTLAPELGNLTHLKSLILRNNSFSGKVPEEVTELQELEILDLCDNNFG 136
Query: 197 M-YASSANLTGLCHL-------SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKD 248
+ + L + S ++ + FF P+ + P T Q + N
Sbjct: 137 QPFPFARRLLQISPPPSQPSPPSPMEEVPIDFPFFFAPPPQNIGASPPTETQ--VIPNPS 194
Query: 249 PKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLV 308
P PPA+ +P Q +E H + + + I+ G +VGVL ++
Sbjct: 195 PVP--------PPPAQPPPAQTPPPQLSE--VPHAVNKKKSHKSKMYIIVGVLVGVLGVM 244
Query: 309 AGFTGLQRCXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGS 368
A + + V + ELE ACEDFSNIIGS
Sbjct: 245 AALVAFFFLWNQKVKLIKPWGETGSSGQL--QDVVTTGVPKLKLAELETACEDFSNIIGS 302
Query: 369 -SPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGY 426
S D+ +YKGT+ G EIAV+++ + W+ E FQ + L+++NH+N ++GY
Sbjct: 303 TSSDATIYKGTLSTGSEIAVLAVASGSLQDWSEDHETQFQEK--RLSQVNHKNFLNVIGY 360
Query: 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGP-P 485
C E PF RMLVF+YA NG+L+EHLH + + W R++IV+GIA ++++H L P P
Sbjct: 361 CHEDEPFNRMLVFEYAPNGSLFEHLHDQDAEHLDWPMRLRIVMGIAYCMEHMHN-LNPKP 419
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGT-LGSQGAI 532
+ + LNSS+VYL D++ K+ DF T L+ + +P T + S GA+
Sbjct: 420 ISHTNLNSSSVYLATDYAAKVSDF----TFLSSTPLDPMTNVSSFGAL 463
|
|
| TAIR|locus:2171233 AT5G58540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 93/226 (41%), Positives = 136/226 (60%)
Query: 342 EILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCI-KEEHWTGY 400
+++ DV R EL+ ACEDFSN+IGS D +YKGT+ G EIAV+S+ W+
Sbjct: 184 DLITDVPRLQLSELQAACEDFSNVIGSFSDGTIYKGTLSTGAEIAVVSIVAGSRSDWSTT 243
Query: 401 LELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS 460
++ +++ +L++++H+N ++GYC E PF RMLVF+YA NG+L EHLH +
Sbjct: 244 MDTQLLQKMHNLSKVDHKNFLNVIGYCLEEEPFKRMLVFEYAPNGSLSEHLHSQYVEHLD 303
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
W R++IV+GIA L+++H L PP +S L+SS+VYLTED + K+ DF +I E
Sbjct: 304 WPTRLRIVMGIAYCLEHMHN-LNPPILLSNLDSSSVYLTEDNAAKVSDFSVINSIFPSKE 362
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
GS + PS L D N++ FG +L EIISG+ P
Sbjct: 363 ------GSSSKNLLEPSLL-----DPHTNVFNFGAVLFEIISGKLP 397
|
|
| TAIR|locus:2078436 AT3G56050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 129/373 (34%), Positives = 205/373 (54%)
Query: 260 APPARTRAGLSP-KHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQ--R 316
+PPA+ + P H + S+S+ + T+ IV G + G +F++ TG+ +
Sbjct: 112 SPPAQHVSAPPPFVHHVT--LPSLTSSSKTSSNSTIPIVAGCIAGAVFILLLATGVFFFK 169
Query: 317 CXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYK 376
+ ++I V + R E+E ACEDFSN+IGS P ++K
Sbjct: 170 SKAGKSVNPWRTGLSGQLQKVFITG-----VPKLKRSEIEAACEDFSNVIGSCPIGTLFK 224
Query: 377 GTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435
GT+ G EIAV S+ + WT +E+ F++++ L++INH+N LLGYC E PFTR
Sbjct: 225 GTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEMLSKINHKNFVNLLGYCEEEEPFTR 284
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
+LVF+YASNGT++EHLHY E + W R++I +GIA L ++H L PP S L SS+
Sbjct: 285 ILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGIAYCLDHMHG-LKPPIVHSNLLSSS 343
Query: 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGV 555
V LTED++ K+ DF+ + + SE T S A+ I + E D N+++FG+
Sbjct: 344 VQLTEDYAVKIADFN-FGYLKGPSE----TESSTNAL-IDTNISETTQED---NVHSFGL 394
Query: 556 LLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCV 615
LL E+++G+ P KG+ +D + + +VDP ++ F + ++ I EV+ C+
Sbjct: 395 LLFELMTGKLPESVQKGDSIDTGLAVFLRGKTLREMVDPTIESFD-EKIENIGEVIKSCI 453
Query: 616 NPDITKRPSMQEL 628
D +RP M+E+
Sbjct: 454 RADAKQRPIMKEV 466
|
|
| TAIR|locus:2206179 FEI1 "FEI 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 333 (122.3 bits), Expect = 3.2e-49, Sum P(2) = 3.2e-49
Identities = 91/300 (30%), Positives = 154/300 (51%)
Query: 345 KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY 404
KD+++ +LE+ E+ +IIG VYK M G A+ + E G+ + +
Sbjct: 297 KDIIK----KLEMLNEE--HIIGCGGFGTVYKLAMDDGKVFALKRILKLNE---GF-DRF 346
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L I H L GYC +SP +++L++DY G+L E LH Q+ W R
Sbjct: 347 FERELEILGSIKHRYLVNLRGYC--NSPTSKLLLYDYLPGGSLDEALHVERGEQLDWDSR 404
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ I+IG A+GL YLH + P ++ SS + L + ++ DF K +L E +
Sbjct: 405 VNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK-LLEDEESHIT 463
Query: 525 TL--GSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCK---DKG-NLVDWA 578
T+ G+ G + P +++ + ++Y+FGVL+LE++SG+ P +KG N+V W
Sbjct: 464 TIVAGTFGYLA--PEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWL 521
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638
K +L + +VDP + + L + + CV+P +RP+M + +LE + T
Sbjct: 522 K-FLISEKRPRDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESEVMT 580
|
|
| TAIR|locus:2063146 AT2G40270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 140/402 (34%), Positives = 216/402 (53%)
Query: 247 KDPKQR---ATTLCGGAP-PA----RTRAGL--SP-KHQAAEDVSKHQSA---SRPAWL- 291
KD K R ATT +P PA T+A P K + +DVS SA + P
Sbjct: 73 KDRKNRVVAATTTPSSSPEPAPKHVSTKASTVSEPQKRSSTQDVSPSPSAPLANSPIPRN 132
Query: 292 --LTLEIVTGTMVGVLFLVAGFTGLQRCXXXXXXXXXXXXXXXEKDHIYIDSEILKDVVR 349
++ +V G + G FL+ TGL + + +
Sbjct: 133 SHSSVPLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQ---LQKVFVTGIPV 189
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQRE 408
R E+E ACEDFSN+IGS P ++KGT+ G EIAV S + W E++F+++
Sbjct: 190 LKRSEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKK 249
Query: 409 VADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIV 468
+ L++INH+N LLGYC E PFTR+L+F+YA NG+L+EHLHY E + W R++I
Sbjct: 250 IEMLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIA 309
Query: 469 IGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGS 528
+G+A L ++H +L PP + L SS++ LTED++ K+ DF S+ + + N T
Sbjct: 310 MGLAYCLDHMH-QLNPPIAHTNLVSSSLQLTEDYAVKVSDF-SFGSSETETNINNNT--- 364
Query: 529 QGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK-DYLELPEV 587
++ + + A L+ + NIY+FG+LL E+I+G+ +K + VD + D+L E
Sbjct: 365 -----VIDTHISA--LNPEDNIYSFGLLLFEMITGKLIESVNKPDSVDSSLVDFLR-GET 416
Query: 588 MSYVVDPELKHFSYD-DLKVICEVVNLCVNPDITKRPSMQEL 628
++ +VDP L+ SYD ++ I EV+ C+ D +RP+MQE+
Sbjct: 417 LAKMVDPTLE--SYDAKIENIGEVIKSCLRTDPKERPTMQEV 456
|
|
| TAIR|locus:2013021 SERK1 "somatic embryogenesis receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 100/308 (32%), Positives = 155/308 (50%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA + FSN I+G VYKG + G +AV L KEE
Sbjct: 279 DPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 336
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 337 TPGG-ELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERLLVYPYMANGSVASCLRERPP 393
Query: 457 CQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
Q + W R +I +G ARGL YLH P ++ ++ + L E+F + DF K
Sbjct: 394 SQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK- 452
Query: 515 ILARSEKNPGTLGSQGAIC-ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP------C 567
L + T +G I I P L + +++ +G++LLE+I+G+
Sbjct: 453 -LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLA 511
Query: 568 CKDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQ 626
D L+DW K L+ + + +VDP+L+ ++ +L+ + +V LC +RP M
Sbjct: 512 NDDDVMLLDWVKGLLK-EKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMS 570
Query: 627 ELCTMLEG 634
E+ MLEG
Sbjct: 571 EVVRMLEG 578
|
|
| TAIR|locus:2026097 SERK2 "somatic embryogenesis receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 335 (123.0 bits), Expect = 3.2e-46, Sum P(2) = 3.2e-46
Identities = 98/308 (31%), Positives = 158/308 (51%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA + FSN I+G VYKG + G +AV L KEE
Sbjct: 282 DPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 339
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 340 TPGG-ELQFQTEVEMISMAVHRNLLRLRGFCM--TPTERLLVYPYMANGSVASCLRERPP 396
Query: 457 CQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
Q+ +W+ R +I +G ARGL YLH P ++ ++ + L E+F + DF +
Sbjct: 397 SQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAR- 455
Query: 515 ILARSEKNPGTLGSQGAIC-ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP------C 567
L + T +G I I P L + +++ +G++LLE+I+G+
Sbjct: 456 -LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLA 514
Query: 568 CKDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQ 626
D L+DW K L+ + + +VDP+L+ +++ +++ + +V LC +RP M
Sbjct: 515 NDDDVMLLDWVKGLLK-EKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMS 573
Query: 627 ELCTMLEG 634
E+ MLEG
Sbjct: 574 EVVRMLEG 581
|
|
| TAIR|locus:2036636 NIK3 "NSP-interacting kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 4.4e-45, Sum P(2) = 4.4e-45
Identities = 99/307 (32%), Positives = 153/307 (49%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + R++ +EL A F+ NI+G +VYKG + G +AV L K+ +
Sbjct: 278 DPEVSLGHLKRYTFKELRSATNHFNSKNILGRGGYGIVYKGHLNDGTLVAVKRL--KDCN 335
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G E+ FQ EV ++ H N +L G+C SS R+LV+ Y NG++ L R
Sbjct: 336 IAGG-EVQFQTEVETISLALHRNLLRLRGFC--SSNQERILVYPYMPNGSVASRLKDNIR 392
Query: 457 CQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
+ + W+RR KI +G ARGL YLH + P ++ ++ + L EDF + DF K
Sbjct: 393 GEPALDWSRRKKIAVGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 452
Query: 515 ILAR-SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC-----C 568
+ R S G+ G I P L + +++ FG+LLLE+I+G+
Sbjct: 453 LDHRDSHVTTAVRGTVGHIA--PEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRSA 510
Query: 569 KDKGNLVDWAKDYLELPEVMSYVVDPELKH-FSYDDLKVICEVVNLCVNPDITKRPSMQE 627
KG ++DW K L + ++D +L F +L+ I +V LC + + RP M E
Sbjct: 511 HQKGVMLDWVKK-LHQEGKLKQLIDKDLNDKFDRVELEEIVQVALLCTQFNPSHRPKMSE 569
Query: 628 LCTMLEG 634
+ MLEG
Sbjct: 570 VMKMLEG 576
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| C0LGH8 | Y1634_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.6796 | 0.9939 | 0.9849 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00000392001 | SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (660 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 658 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-31 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-25 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-21 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-18 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-18 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-16 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-15 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-14 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-13 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-13 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-13 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 6e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-12 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-10 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 3e-09 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 1e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-08 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 4e-08 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 5e-08 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 3e-07 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-07 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 5e-07 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 7e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 8e-07 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-06 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 2e-06 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 2e-06 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 2e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-06 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-06 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 9e-06 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 1e-05 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-05 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-05 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-05 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-05 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 4e-05 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 4e-05 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-05 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 6e-05 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 7e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 9e-05 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 2e-04 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 3e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 3e-04 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 3e-04 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 3e-04 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 4e-04 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 4e-04 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 4e-04 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-04 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 7e-04 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 7e-04 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 8e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.001 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 0.001 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 0.001 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 0.002 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 0.002 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 0.002 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 0.003 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 0.004 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.004 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 0.004 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 0.004 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 4e-31
Identities = 148/585 (25%), Positives = 241/585 (41%), Gaps = 123/585 (21%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
L+ L L N G +P++LG L L L L N+L+G IP E+ + LV ++L N L+
Sbjct: 477 LENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215
G++PA + L +L L +N+L G +P NL + L Q+ +
Sbjct: 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPK------------------NLGNVESLVQVNI 578
Query: 216 ADFSYNFFVGSIPKCLEYLP--STSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLSPKH 273
S+N GS+P +L +++ GN LCGG T +GL P
Sbjct: 579 ---SHNHLHGSLPSTGAFLAINASAVAGN-----------IDLCGG----DTTSGLPP-- 618
Query: 274 QAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASE 333
+ V K P+W + G + + + GF R ++ + K
Sbjct: 619 --CKRVRK-----TPSWWFYITCTLGAFLVLALVAFGFV-FIRGRNNLEL-----KRVEN 665
Query: 334 KDHI----YIDSEILKDV----VRFSRQELEVACEDFSNIIGSSPDSLVYKG-TMKGGPE 384
+D + DS++ K + + S +E N+I YKG ++K G
Sbjct: 666 EDGTWELQFFDSKVSKSITINDILSSLKE--------ENVISRGKKGASYKGKSIKNG-- 715
Query: 385 IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444
+ +KE + + +AD+ ++ H N KL+G CR S L+ +Y
Sbjct: 716 ---MQFVVKEINDVNSIPSSE---IADMGKLQHPNIVKLIGLCR--SEKGAYLIHEYIEG 767
Query: 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504
L E L +SW RR KI IGIA+ L++LH P + L+ + + P
Sbjct: 768 KNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822
Query: 505 KLVDFDSWKTILARSEKNPGTLGSQGAICI-----------LPSSLEARHLDVQGNIYAF 553
L L G +C P + E + + + +IY F
Sbjct: 823 HLR------------------LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGF 864
Query: 554 GVLLLEIISGRPPCCKDKG---NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEV 610
G++L+E+++G+ P + G ++V+WA+ Y + +DP ++ + I EV
Sbjct: 865 GLILIELLTGKSPADAEFGVHGSIVEWAR-YCYSDCHLDMWIDPSIRGDVSVNQNEIVEV 923
Query: 611 VNL---CVNPDITKRPSMQELCTMLEG--RIDTSISVELKASSLA 650
+NL C D T RP ++ LE R +S LK SSL
Sbjct: 924 MNLALHCTATDPTARPCANDVLKTLESASRSSSSCVTGLKFSSLF 968
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 6e-25
Identities = 86/289 (29%), Positives = 124/289 (42%), Gaps = 60/289 (20%)
Query: 17 LFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKIN 76
LF + E L +FK +I DP LSNWN+ AD C W GI C+++ RV+ I+
Sbjct: 19 LFLNFSMLHAEELELLLSFKSSI-NDPLKYLSNWNS-SADVCLWQGITCNNS-SRVVSID 75
Query: 77 ISGSSLKGFLAPEL---------------------------------------------- 90
+SG ++ G ++ +
Sbjct: 76 LSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP 135
Query: 91 -GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
G + L+ L L N L G IP ++G LK+LDLG N L G IP + NLT L + L
Sbjct: 136 RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTL 195
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206
SN L G++P ELG + SL+ ++L N L G +P G +++ + NLTG
Sbjct: 196 ASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIP--YEIGGLTSLNHLDLVYNNLTGPIP 253
Query: 207 --LCHLSQLKVADFSYNFFVGSIPKC---LEYLPSTSFQGNCLQNKDPK 250
L +L L+ N G IP L+ L S N L + P+
Sbjct: 254 SSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE 302
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 8e-21
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++ G+ L G + L LT L+ L L N L+G IP+ELG +K LK + LG N L+G I
Sbjct: 169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEI 228
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P EIG LT L ++L N LTG +P+ LGNL +L+ L L +N+L G +P S +
Sbjct: 229 PYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS--LQKL 286
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
+ S +L+G + L L++ N F G IP L LP
Sbjct: 287 ISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP 332
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 1e-18
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 71 RVLK-INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
+ LK I + ++L G + E+G LT L L L NNL G IP LG LK L+ L L N+
Sbjct: 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNK 271
Query: 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
L+GPIPP I +L L+ ++L N L+G +P + L +LE LHL N G +P S
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331
Query: 190 YTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCL 231
+ ++ S +G L + L V D S N G IP+ L
Sbjct: 332 PRLQVLQLW--SNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 2e-18
Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPC----H-WTGIAC---SDARDRVLK-IN 76
E AL T K ++ WN DPC H W+G C S + +
Sbjct: 371 LEEVSALQTLKSSLGLPLRF---GWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLG 424
Query: 77 ISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP 136
+ L+GF+ ++ L +LQ + L GN++ G IP LG + L++LDL N G IP
Sbjct: 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAELG 163
+G LT L +NL N L+GR+PA LG
Sbjct: 485 SLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 3e-16
Identities = 75/282 (26%), Positives = 119/282 (42%), Gaps = 52/282 (18%)
Query: 374 VYKGTMKGGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
VYKG +KG E+AV +L KE+ + F +E + ++ H N +LLG C E
Sbjct: 11 VYKGKLKGKDGKTTEVAVKTL--KEDASEEERKD-FLKEARVMKKLGHPNVVRLLGVCTE 67
Query: 430 SSPFTRMLVFDYASNGTLYEHL-------HYGERCQVSWTRRMKIVIGIARGLKYLHTEL 482
P LV +Y G L ++L E+ +S + I IA+G++YL ++
Sbjct: 68 EEPL--YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK- 124
Query: 483 GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR--SEKNPGTLGSQGAICI---LPS 537
F +L + + ED K+ DF L+R + + + G + I P
Sbjct: 125 --KFVHRDLAARNCLVGEDLVVKISDFG-----LSRDVYDDDYYRKKTGGKLPIRWMAPE 177
Query: 538 SLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD- 593
SL+ + ++++FGVLL EI + G P Y L EV+ Y+
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATP--------------YPGLSNEEVLEYLRKG 223
Query: 594 --PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ D+L E++ C D RP+ EL LE
Sbjct: 224 YRLPKPEYCPDELY---ELMLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 3e-15
Identities = 60/266 (22%), Positives = 100/266 (37%), Gaps = 58/266 (21%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
+G VY K + I IK+E + LE RE+ L ++NH N KL G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIK-IIKKEDSSSLLE-ELLREIEILKKLNHPNIVKLYG 58
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
+ + LV +Y G+L + L E +S ++I++ I GL+YLH+
Sbjct: 59 VFEDENHL--YLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLHSN---G 112
Query: 486 FTISELNSSAVYLTED-FSPKLVDFDSWKTILARSEKNPGTLGSQGAIC--ILPSSLEAR 542
+L + L D KL DF K + + +G+ + +L L
Sbjct: 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVL---LGKG 169
Query: 543 HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602
+ + +I++ GV+L E+ PELK
Sbjct: 170 YYSEKSDIWSLGVILYEL---------------------------------PELK----- 191
Query: 603 DLKVICEVVNLCVNPDITKRPSMQEL 628
+++ + D KRPS +E+
Sbjct: 192 ------DLIRKMLQKDPEKRPSAKEI 211
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 73.7 bits (182), Expect = 2e-14
Identities = 73/280 (26%), Positives = 118/280 (42%), Gaps = 58/280 (20%)
Query: 374 VYKGTMKGGP-----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
VYKG +KG E+AV +L KE+ +E F RE + +++H N KLLG C
Sbjct: 15 VYKGKLKGKGGKKKVEVAVKTL--KEDASEQQIEE-FLREARIMRKLDHPNVVKLLGVCT 71
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488
E P +V +Y G L +L R ++S + + + IARG++YL ++ F
Sbjct: 72 EEEPL--YIVMEYMEGGDLLSYLRK-NRPKLSLSDLLSFALQIARGMEYLESK---NFIH 125
Query: 489 SELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEARHL 544
+L + + E+ K+ DF L+R + +G + P SL+
Sbjct: 126 RDLAARNCLVGENLVVKISDFG-----LSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKF 180
Query: 545 DVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD------PE 595
+ ++++FGVLL EI + G P Y + EV+ Y+ + P
Sbjct: 181 TSKSDVWSFGVLLWEIFTLGEQP--------------YPGMSNEEVLEYLKNGYRLPQPP 226
Query: 596 LKHFSYDDLKVICEVVNL---CVNPDITKRPSMQELCTML 632
E+ +L C D RP+ EL +L
Sbjct: 227 NCP---------PELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 72.2 bits (178), Expect = 4e-14
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 57/280 (20%)
Query: 374 VYKGTMKGGP-----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
VYKGT+KG E+AV +L KE+ +E F RE + +++H N KLLG C
Sbjct: 15 VYKGTLKGKGDGKEVEVAVKTL--KEDASEQQIEE-FLREARIMRKLDHPNIVKLLGVCT 71
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488
E P M+V +Y G L ++L ++S + + + IARG++YL ++ F
Sbjct: 72 EEEPL--MIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIH 126
Query: 489 SELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEARHL 544
+L + + E+ K+ DF L+R + +G + P SL+
Sbjct: 127 RDLAARNCLVGENLVVKISDFG-----LSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKF 181
Query: 545 DVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD------PE 595
+ ++++FGVLL EI + G P Y + EV+ Y+ P
Sbjct: 182 TSKSDVWSFGVLLWEIFTLGEEP--------------YPGMSNAEVLEYLKKGYRLPKPP 227
Query: 596 LKHFSYDDLKVICEVVNL---CVNPDITKRPSMQELCTML 632
E+ L C D RP+ EL +L
Sbjct: 228 NCP---------PELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 7e-14
Identities = 42/114 (36%), Positives = 66/114 (57%)
Query: 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
R+ +++S + G + +LG L+ L +L L N L G IP EL K+L LDL NQ
Sbjct: 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534
Query: 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
L+G IP + L +++L N L+G +P LGN+ SL ++++ N L G++P
Sbjct: 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-13
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L LQ L L N G IPK LG L +LDL TN LTG IP + + L K+ L SN
Sbjct: 331 LPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSN 390
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA--NIHGMYASSANLTG---- 206
L G +P LG SL + L N G +P S +T ++ + S+ NL G
Sbjct: 391 SLEGEIPKSLGACRSLRRVRLQDNSFSGELP----SEFTKLPLVYFLDISNNNLQGRINS 446
Query: 207 -LCHLSQLKVADFSYNFFVGSIP 228
+ L++ + N F G +P
Sbjct: 447 RKWDMPSLQMLSLARNKFFGGLP 469
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 1e-13
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 365 IIGSSPDSLVYKGTMKGGPEI-AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+GS VYK KG +I AV L + E + +RE+ L R++H N +L
Sbjct: 6 KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSK--KDQTARREIRILRRLSHPNIVRL 63
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELG 483
+ + LV +Y G L+++L +S KI + I RGL+YLH
Sbjct: 64 IDAFEDKD--HLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLH---- 115
Query: 484 PPFTISE------LNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG--AICIL 535
S L + L E+ K+ DF K +L S +G+ A +L
Sbjct: 116 -----SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVL 170
Query: 536 PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595
L + ++++ GV+L E+++G+PP ++ L+ +++ ++ P
Sbjct: 171 ---LGGNGYGPKVDVWSLGVILYELLTGKPPF---------SGENILDQLQLIRRILGPP 218
Query: 596 LKH---FSYDDLKVICEVVNLCVNPDITKRPSMQELC 629
L+ + +++ C+N D +KRP+ +E+
Sbjct: 219 LEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 70.6 bits (174), Expect = 2e-13
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 57/280 (20%)
Query: 374 VYKGTMKGGPEIAVISLCIK-------EEHWTGYLELYFQREVADLARINHENTGKLLGY 426
VYKGT+KG E + +K EE F E + + +++H N +LLG
Sbjct: 15 VYKGTLKGDGEGTETKVAVKTLKEGASEEEREE-----FLEEASIMKKLSHPNIVRLLGV 69
Query: 427 CRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
C + P +V +Y G L + L +GE+ + +++ + IA+G++YL ++
Sbjct: 70 CTQGEPL--YIVTEYMPGGDLLDFLRKHGEKLTLKD--LLQMALQIAKGMEYLESK---N 122
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP------SSL 539
F +L + +TE+ K+ DF L+R +G LP SL
Sbjct: 123 FVHRDLAARNCLVTENLVVKISDFG-----LSRDIYEDDYYRKRG-GGKLPIKWMAPESL 176
Query: 540 EARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVD----- 593
+ + ++++FGVLL EI + G P + EV+ + D
Sbjct: 177 KDGKFTSKSDVWSFGVLLWEIFTLGEQPYPG------------MSNEEVLELLEDGYRLP 224
Query: 594 -PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
PE D+L E++ C D RP+ EL L
Sbjct: 225 RPENCP---DELY---ELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 6e-13
Identities = 60/266 (22%), Positives = 94/266 (35%), Gaps = 43/266 (16%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY K ++ I IK++ E RE+ L ++ H N +L +
Sbjct: 15 VYLARDKKTGKLVAIK-VIKKKKIKKDRE-RILREIKILKKLKHPNIVRLYDVFEDEDKL 72
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
LV +Y G L++ L R R + I L+YLH G I
Sbjct: 73 Y--LVMEYCEGGDLFDLLKKRGRLSEDEAR--FYLRQILSALEYLH-SKG----I----- 118
Query: 494 SAVY---------LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ-GAICIL-PSSLEAR 542
V+ L ED KL DF LAR L + G + P L +
Sbjct: 119 --VHRDLKPENILLDEDGHVKLADFG-----LARQLDPGEKLTTFVGTPEYMAPEVLLGK 171
Query: 543 HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602
+I++ GV+L E+++G+PP D L + P S
Sbjct: 172 GYGKAVDIWSLGVILYELLTGKPPFPGDDQLLE-----LFKKIGKPKPPFPPPEWDIS-P 225
Query: 603 DLKVICEVVNLCVNPDITKRPSMQEL 628
+ K +++ + D KR + +E
Sbjct: 226 EAK---DLIRKLLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 2e-12
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQEL-ILH--GNNLIGIIPKELGLLKRLKILDLGT 127
+++ +++S +SL G + PEL + LQ L ILH NN G IP L L RL++L L +
Sbjct: 285 KLISLDLSDNSLSGEI-PEL--VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
N+ +G IP +G L ++L +N LTG +P L + +L +L L N L+G +P
Sbjct: 342 NKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIP 397
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 1e-10
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S ++L G + L L +LIL N+L G IPK LG + L+ + L N +G +
Sbjct: 361 LDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL 420
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P E L + +++ +N L GR+ + ++ SL+ L L RN+ G +P S
Sbjct: 421 PSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS------ 474
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
+L+ D S N F G++P+ L L
Sbjct: 475 ----------------KRLENLDLSRNQFSGAVPRKLGSLS 499
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 4e-10
Identities = 51/150 (34%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 82 LKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL 141
L G + P + L L L L N+L G IP+ + L+ L+IL L +N TG IP + +L
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331
Query: 142 TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS 201
L + L SN +G +P LG +L L L N L G +P G SS
Sbjct: 332 PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG------------LCSS 379
Query: 202 ANLTGLCHLSQLKVADFSYNFFVGSIPKCL 231
NL L S N G IPK L
Sbjct: 380 GNLFKLILFS---------NSLEGEIPKSL 400
|
Length = 968 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 59.8 bits (143), Expect = 2e-09
Identities = 48/251 (19%), Positives = 90/251 (35%), Gaps = 25/251 (9%)
Query: 393 KEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
K+ F RE+ LA +NH KL + ++ LV +Y G+L + L
Sbjct: 32 KKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSL--YLVMEYVDGGSLEDLL 89
Query: 452 HY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDF 509
G + +S + + I+ I L+YLH++ I N + L D KL+DF
Sbjct: 90 KKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPEN---ILLDRDGRVVKLIDF 146
Query: 510 DSWKTILARSEKNPGTLGSQGAICILP-------SSLEARHLDVQGNIYAFGVLLLEIIS 562
K + + ++ L + +I++ G+ L E+++
Sbjct: 147 GLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLT 206
Query: 563 GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL-----KHFSYDDLKVICEVVNLCVNP 617
G PP +K + + +++ + P L K +++ +
Sbjct: 207 GLPPFEGEKNS-----SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAK 261
Query: 618 DITKRPSMQEL 628
D R S
Sbjct: 262 DPKNRLSSSSD 272
|
Length = 384 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 355 LEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLE---LYFQREV 409
++ + +IG V +G +K G EI V IK G + L F E
Sbjct: 1 IDPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDV---AIKTLK-AGSSDKQRLDFLTEA 56
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + + +H N +L G +S P M++ +Y NG+L + L + + + + + ++
Sbjct: 57 SIMGQFDHPNIIRLEGVVTKSRPV--MIITEYMENGSLDKFLRENDG-KFTVGQLVGMLR 113
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP-GTLGS 528
GIA G+KYL +E+ + +L + + + + K+ DF L+R ++ T +
Sbjct: 114 GIASGMKYL-SEMN--YVHRDLAARNILVNSNLVCKVSDFG-----LSRRLEDSEATYTT 165
Query: 529 QGA-ICIL---PSSLEARHLDVQGNIYAFGVLLLEIIS 562
+G I I P ++ R ++++FG+++ E++S
Sbjct: 166 KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-08
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 31 ALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACS 66
AL FK ++ DP LS+WN +DPC WTG+ C
Sbjct: 7 ALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-08
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLK-RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
LT L L L NN I IP +GLLK LK LDL N++ +P + NL L ++L
Sbjct: 115 LTNLTSLDL-DNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L+ LP L NL +L L L N++
Sbjct: 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS 199
|
Length = 394 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 4e-08
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 36/244 (14%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASNGTLYEHL---HYGER- 456
F RE A + +H N KL+G S R M++ + +G L+ L GE
Sbjct: 48 FLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEP 107
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516
+ ++ +I IA G++YL ++ F +L + L E+ + + DF K I
Sbjct: 108 FTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIY 164
Query: 517 ARSEKNPGTLGSQGAICILP------SSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCK 569
+ G QG LP SL +++AFGV + EI++ G+ P
Sbjct: 165 S------GDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG 218
Query: 570 DKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELC 629
+E E+ +Y++ D L+ + E++ C +P+ RPS Q L
Sbjct: 219 ------------VENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLR 266
Query: 630 TMLE 633
LE
Sbjct: 267 DQLE 270
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 32/182 (17%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY----------- 453
F+RE L HEN K G C E P ++VF+Y +G L + L
Sbjct: 55 FEREAELLTNFQHENIVKFYGVCTEGDPP--IMVFEYMEHGDLNKFLRSHGPDAAFLKSP 112
Query: 454 -GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF--- 509
+++ ++ ++I + IA G+ YL ++ F +L + + D K+ DF
Sbjct: 113 DSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVVKIGDFGMS 169
Query: 510 -DSWKTILARSEKNPGTLGSQGAICIL---PSSLEARHLDVQGNIYAFGVLLLEIIS-GR 564
D + T R +G + I P S+ R + ++++FGV+L EI + G+
Sbjct: 170 RDVYTTDYYR-------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
Query: 565 PP 566
P
Sbjct: 223 QP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
IG V G +G ++AV C+K++ F E + + + H N
Sbjct: 9 KLGATIGKGEFGDVMLGDYRG-QKVAV--KCLKDD---STAAQAFLAEASVMTTLRHPNL 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+LLG + +P +V +Y + G+L ++L R ++ +++ + + G++YL
Sbjct: 63 VQLLGVVLQGNPL--YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE 120
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE 540
+ F +L + V ++ED K+ DF LA+ G P +L
Sbjct: 121 K---NFVHRDLAARNVLVSEDLVAKVSDFG-----LAKEASQGQDSGKLPVKWTAPEALR 172
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ + ++++FG+LL EI S GR P
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 4e-07
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 86 LAPELGLLTY-LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ P +GLL L+EL L N I +P L L LK LDL N L+ +P + NL+ L
Sbjct: 131 IPPLIGLLKSNLKELDLSDNK-IESLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNL 188
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
++L N ++ LP E+ L +LEEL L N +
Sbjct: 189 NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII 222
|
Length = 394 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 5e-07
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL--HYGERCQVSWT 462
F E L + +H N +L G + T M+V +Y SNG L L H G Q+
Sbjct: 53 FLAEALTLGQFDHSNIVRLEGVITRGN--TMMIVTEYMSNGALDSFLRKHEG---QLVAG 107
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
+ M ++ G+A G+KYL +E+G + L + V + D K+ F + +SE
Sbjct: 108 QLMGMLPGLASGMKYL-SEMG--YVHKGLAAHKVLVNSDLVCKISGFRRLQE--DKSEAI 162
Query: 523 PGTLGSQG-AICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T+ + + P +++ H ++++FG+++ E++S
Sbjct: 163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 7e-07
Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 49/238 (20%)
Query: 406 QREVADLARINHENTGKLLG--YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTR 463
E+ L + H N K G ++ +V ++ S G+L + L S +
Sbjct: 45 INEIQILKKCKHPNIVKYYGSYLKKD----ELWIVMEFCSGGSLKDLLK-------STNQ 93
Query: 464 RMK------IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517
+ + + +GL+YLH+ ++ ++ + LT D KL+DF L+
Sbjct: 94 TLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDF-GLSAQLS 149
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW 577
++ +G+ + P + + D + +I++ G+ +E+ G+PP
Sbjct: 150 DTKARNTMVGTPYWMA--PEVINGKPYDYKADIWSLGITAIELAEGKPP----------- 196
Query: 578 AKDYLELP--EVMSYVVD---PELKHFSY--DDLKVICEVVNLCVNPDITKRPSMQEL 628
Y ELP + + + P L++ D+ K + + C+ + KRP+ ++L
Sbjct: 197 ---YSELPPMKALFKIATNGPPGLRNPEKWSDEFK---DFLKKCLQKNPEKRPTAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 8e-07
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESS 431
VY+G K +AV +L KE+ +E+ F +E A + I H N +LLG C
Sbjct: 22 VYEGVWKKYSLTVAVKTL--KEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 75
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL 491
PF ++ ++ + G L ++L R +V+ + + I+ ++YL + F +L
Sbjct: 76 PF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL 130
Query: 492 NSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEARHLDVQ 547
+ + E+ K+ DF L+R GA + P SL ++
Sbjct: 131 AARNCLVGENHLVKVADFG-----LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 185
Query: 548 GNIYAFGVLLLEI 560
+++AFGVLL EI
Sbjct: 186 SDVWAFGVLLWEI 198
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 52/273 (19%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
VY K G +AV S+ + + L +RE+ L+ + H N + G R+
Sbjct: 16 VYLALDKDTGELMAVKSVELSGDSEEELEAL--EREIRILSSLQHPNIVRYYGSERDEEK 73
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQ----VSWTRRMKIVIGIARGLKYLHTELGPPFTI 488
T + +Y S G+L L + +TR+ I GL YLH G
Sbjct: 74 NTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQ------ILEGLAYLH-SNG--IVH 124
Query: 489 SELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EARHL 544
++ + + + D KL DF K + E GT +G + E
Sbjct: 125 RDIKGANILVDSDGVVKLADFGCAKRL-GDIETGEGTGSVRG------TPYWMAPEVIRG 177
Query: 545 DVQG---NIYAFGVLLLEIISGRPPCCKDKGNLVD------WAKDYLELPEVMSYVVDPE 595
+ G +I++ G ++E+ +G+PP + GN + + + E+PE +S E
Sbjct: 178 EEYGRAADIWSLGCTVIEMATGKPPWS-ELGNPMAALYKIGSSGEPPEIPEHLS----EE 232
Query: 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
K F + C+ D KRP+ EL
Sbjct: 233 AKDF-----------LRKCLRRDPKKRPTADEL 254
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 2e-06
Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 47/198 (23%)
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L + GL G +P ++ L L+ ++L N ++G +P S ++T
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP---------------SLGSITS 467
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPS---TSFQGNCLQNKDPKQRATTLCGGAPPA 263
L +V D SYN F GSIP+ L L S + GN L + P GG
Sbjct: 468 L------EVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA-----LGGRLLH 516
Query: 264 RTR------AGLS--PKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQ 315
R AGL P +A H S + I G V LFLV +
Sbjct: 517 RASFNFTDNAGLCGIPGLRAC---GPHLSVG-----AKIGIAFGVSVAFLFLVIC--AMC 566
Query: 316 RCKSKPSIIIPWKKSASE 333
K + +I+ + +A E
Sbjct: 567 WWKRRQNILRAQRIAARE 584
|
Length = 623 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 405 FQREVADLARINHENTGKLLGYCRE-SSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWT 462
+ E+ +L RI+ N K+ G+ + R+ L+ +Y + G L E L E+ +S+
Sbjct: 65 TENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK-EK-DLSFK 122
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
++ + I +GL L+ P+ L S + +TE++ K++ K + + KN
Sbjct: 123 TKLDMAIDCCKGLYNLYKYTNKPY--KNLTSVSFLVTENYKLKIICHGLEKILSSPPFKN 180
Query: 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP----CCKDKGNLVDWA 578
+ +L + +IY+ GV+L EI +G+ P K+ +L+
Sbjct: 181 VNFMVYFSYK-MLNDIFSEYTIK--DDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI--I 235
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
L + + I +V C + D KRP+++E+
Sbjct: 236 NKNNSLK------LPLDCPLE-------IKCIVEACTSHDSIKRPNIKEI 272
|
Length = 283 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 30/234 (12%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 104
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+K + + ++YL F +L + V ++ED K+ DF K A S ++ G
Sbjct: 105 LKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTG 159
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLE 583
L + P +L + + ++++FG+LL EI S GR P Y
Sbjct: 160 KLPVKWTA---PEALREKKFSTKSDVWSFGILLWEIYSFGRVP--------------YPR 202
Query: 584 LPEVMSYVVDPELKHFSYDD----LKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+P + VV K + D V+ +V+ C + D RPS +L LE
Sbjct: 203 IP--LKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 466 KIVIGIARGLKYLHTELGPPFTI--SELNSSAVYLTEDFSPKLVDFD-SWKTILARSEKN 522
KI + + +GL YLH + I ++ S + + KL DF S + + + ++
Sbjct: 104 KIAVAVLKGLTYLHEKHK----IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159
Query: 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL 582
GT + + P ++ V+ +I++ G+ L+E+ +GR P
Sbjct: 160 VGT-----SSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFP-------YPPENDPPD 207
Query: 583 ELPEVMSYVVD---PEL--KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631
+ E++ Y+V+ P L FS D + VNLC+ D +RPS +EL
Sbjct: 208 GIFELLQYIVNEPPPRLPSGKFSPD----FQDFVNLCLIKDPRERPSYKELLEH 257
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 3e-06
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY----------- 453
FQRE A +A +H N KLLG C P L+F+Y + G L E L +
Sbjct: 55 FQREAALMAEFDHPNIVKLLGVCAVGKPMC--LLFEYMAYGDLNEFLRHRSPRAQCSLSH 112
Query: 454 ---------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504
+S T ++ I +A G+ YL F +L + + E+
Sbjct: 113 STSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVV 169
Query: 505 KLVDFDSWKTILA----RSEKNPGTLGSQGAICIL---PSSLEARHLDVQGNIYAFGVLL 557
K+ DF + I + ++ +N AI I P S+ + +++A+GV+L
Sbjct: 170 KIADFGLSRNIYSADYYKASEND-------AIPIRWMPPESIFYNRYTTESDVWAYGVVL 222
Query: 558 LEIIS 562
EI S
Sbjct: 223 WEIFS 227
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 4e-06
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VYKG +KG E+AV + C L+ F +E L + +H N KL+G C + P
Sbjct: 11 VYKGVLKGNTEVAVKT-C--RSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPI 67
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFT 487
+V + G+L L ++ +++ + +++ + A G++YL H +L
Sbjct: 68 --YIVMELVPGGSLLTFLR-KKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLA---- 120
Query: 488 ISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI-----LPSSLEAR 542
+ + E+ K+ DF ++R E+ S G I P +L
Sbjct: 121 -----ARNCLVGENNVLKISDFG-----MSREEEGGIYTVSDGLKQIPIKWTAPEALNYG 170
Query: 543 HLDVQGNIYAFGVLLLEIISG 563
+ +++++G+LL E S
Sbjct: 171 RYTSESDVWSYGILLWETFSL 191
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 9e-06
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHY----GER 456
F E A + +H N KL+G C E+S + M++ + +G L+ L Y G
Sbjct: 48 FLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLP 107
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516
++ +K ++ IA G++YL F +L + L ED + + DF K I
Sbjct: 108 EKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSKKIY 164
Query: 517 ARSEKNPGTLGSQGAICILP------SSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ G QG I +P SL R + +++AFGV + EI + G+ P
Sbjct: 165 S------GDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP 215
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 1e-05
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L PE+ LL+ L+EL L N++I + L LK L L+L N+L IGNL+ L
Sbjct: 201 LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPES-IGNLSNLE 258
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
++L +N ++ + + LG+L +L EL L N L A+P
Sbjct: 259 TLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPL 295
|
Length = 394 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 32/195 (16%)
Query: 388 ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC-----RESSPFTRMLVFDYA 442
I++C + E +E F E + +H N +L+G C E P + +++ +
Sbjct: 36 IAICTRSE-----ME-DFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP-SPVVILPFM 88
Query: 443 SNGTLYEHLHY---GERCQVSWTRRM-KIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498
+G L+ L Y G+ Q T+ + K + IA G++YL ++ F +L + L
Sbjct: 89 KHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCML 145
Query: 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP------SSLEARHLDVQGNIYA 552
E+ + + DF K I G QG I +P SL R + ++++
Sbjct: 146 NENMNVCVADFGLSKKIYN------GDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWS 199
Query: 553 FGVLLLEIIS-GRPP 566
FGV + EI + G+ P
Sbjct: 200 FGVTMWEIATRGQTP 214
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E A + +++H+N +LLG + + +V + S G L L R VS +
Sbjct: 46 FLEETAVMTKLHHKNLVRLLGVILHNGLY---IVMELMSKGNLVNFLRTRGRALVSVIQL 102
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
++ + +A G++YL ++ +L + + ++ED K+ DF LAR
Sbjct: 103 LQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFG-----LARVGSMGV 154
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
P +L+ + + +++++GVLL E+ S GR P
Sbjct: 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAP 197
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
Query: 374 VYKGTMKG-GPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VYKG + G ++ S+ IK +E+ ++ F++E ++ + H N LLG C +
Sbjct: 21 VYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMK---------IVIGIARGLK 476
P T ML F+Y ++G L+E L H + I I IA G++
Sbjct: 81 QP-TCML-FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGME 138
Query: 477 YL 478
YL
Sbjct: 139 YL 140
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----------YGERC----QVSWT 462
H+N LLG C + P ++ +YAS G L E+L Y Q+S+
Sbjct: 83 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFK 140
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 141 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 197
Query: 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEI--ISGRP 565
T G + P +L R Q ++++FGVLL EI + G P
Sbjct: 198 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 242
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 355 LEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELY---FQREV 409
++ +C +IG+ V G +K G EI V +K GY E F E
Sbjct: 1 IDASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLK----AGYTEKQRRDFLSEA 56
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL--HYGERCQVSWTRRMKI 467
+ + + +H N L G +S P M+V +Y NG+L L H G Q + + + +
Sbjct: 57 SIMGQFDHPNIIHLEGVVTKSKPV--MIVTEYMENGSLDAFLRKHDG---QFTVIQLVGM 111
Query: 468 VIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLG 527
+ GIA G+KYL +++G + +L + + + + K+ DF + + E T G
Sbjct: 112 LRGIASGMKYL-SDMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRG 168
Query: 528 SQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G I I P ++ R +++++G+++ E++S
Sbjct: 169 --GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 20/121 (16%)
Query: 374 VYKGTMKGGPE------IAVISL-CIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426
V+ KG E + V +L K+E+ L+ F+RE+ +++H+N +LLG
Sbjct: 21 VFLAKAKGIEEEGGETLVLVKALQKTKDEN----LQSEFRRELDMFRKLSHKNVVRLLGL 76
Query: 427 CRESSPFTRMLVFDYASNGTLYEHL-------HYGERCQVSWTRRMKIVIGIARGLKYLH 479
CRE+ P ++ +Y G L + L + +S +++ + IA G+ +L
Sbjct: 77 CREAEPH--YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS 134
Query: 480 T 480
Sbjct: 135 N 135
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 3e-05
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 19/176 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY----------- 453
FQRE L + H++ + G C E P ++VF+Y +G L L
Sbjct: 54 FQREAELLTVLQHQHIVRFYGVCTEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKILAGG 111
Query: 454 -GERC-QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
Q++ + + I IA G+ YL F +L + + + K+ DF
Sbjct: 112 EDVAPGQLTLGQMLAIASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGM 168
Query: 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ I + G + P S+ R + +I++FGV+L EI + G+ P
Sbjct: 169 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 4e-05
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERC------ 457
F RE L + HE+ K G C E P ++VF+Y +G L + L +G
Sbjct: 54 FHREAELLTNLQHEHIVKFYGVCVEGDPL--IMVFEYMKHGDLNKFLRAHGPDAVLMAEG 111
Query: 458 ----QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513
+++ ++ + I IA G+ YL ++ F +L + + E+ K+ DF +
Sbjct: 112 NRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR 168
Query: 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ + G + P S+ R + ++++ GV+L EI + G+ P
Sbjct: 169 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L ++HEN K G C + + L+ +Y +G+L ++L R Q++ R
Sbjct: 53 FEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQ-RHRDQINLKRL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
+ I +G+ YL ++ + +L + + + + K+ DF K + +
Sbjct: 112 LLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYV 168
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPC 567
K PG P L ++++FGV L E+ + G P
Sbjct: 169 KEPGESPIF---WYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 5e-05
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YG--------- 454
FQRE L + HE+ K G C + P ++VF+Y +G L + L +G
Sbjct: 54 FQREAELLTNLQHEHIVKFYGVCGDGDPL--IMVFEYMKHGDLNKFLRAHGPDAMILVDG 111
Query: 455 ----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510
+ ++ ++ + I IA G+ YL ++ F +L + + + K+ DF
Sbjct: 112 QPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFG 168
Query: 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ + + G + P S+ R + ++++FGV+L EI + G+ P
Sbjct: 169 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 6e-05
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGL 154
L+ L L N L I L LK+LDL N LT I PE L L ++L N L
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTS-ISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 374 VYKGT--MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V KG MK G E+ V +K+EH + F RE + +A+++H +L+G C +
Sbjct: 11 VVKGVYLMKSGKEVEVAVKTLKQEHIAA-GKKEFLREASVMAQLDHPCIVRLIGVC-KGE 68
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL 491
P MLV + A G L ++L VS + + +A G+ YL F +L
Sbjct: 69 PL--MLVMELAPLGPLLKYLKKRREIPVSDLKEL--AHQVAMGMAYLE---SKHFVHRDL 121
Query: 492 NSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLEARHLDVQGNI 550
+ V L K+ DF + + A S+ T + + P + + ++
Sbjct: 122 AARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDV 181
Query: 551 YAFGVLLLEIIS-GRPPCCKDKGNLV 575
+++GV L E S G P + KG V
Sbjct: 182 WSYGVTLWEAFSYGAKPYGEMKGAEV 207
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 7e-05
Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL-ELYFQREVADLARINHENT 420
IGS LV+ G ++A+ + I+E G + E F E + +++H
Sbjct: 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKT--IRE----GAMSEEDFIEEAQVMMKLSHPKL 61
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+L G C E SP LVF++ +G L ++L +R + S + + + + G+ YL +
Sbjct: 62 VQLYGVCTERSPIC--LVFEFMEHGCLSDYLR-AQRGKFSQETLLGMCLDVCEGMAYLES 118
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSL 539
+L + + E+ K+ DF + +L ++ + G++ + P
Sbjct: 119 S---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVL--DDQYTSSTGTKFPVKWSSPEVF 173
Query: 540 EARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 174 SFSKYSSKSDVWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 9e-05
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 119 RLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNR 177
LK LDL N+LT IP L L ++L N LT P L SL L L N
Sbjct: 1 NLKSLDLSNNRLTV-IPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 178 L 178
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL---------HYGERC-----QVSWT 462
H+N LLG C + P ++ +YAS G L E+L + + C Q+++
Sbjct: 77 HKNIINLLGACTQDGPL--YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFK 134
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
+ +ARG++YL ++ +L + V +TED K+ DF LAR N
Sbjct: 135 DLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTEDNVMKIADFG-----LARDVHN 186
Query: 523 -----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 187 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 13/161 (8%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
FQ+EV L R+ H++ L C P ++ + G+L L E +
Sbjct: 49 FQKEVQALKRLRHKHLISLFAVCSVGEPV--YIITELMEKGSLLAFLRSPEGQVLPVASL 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + +A G+ YL + +L + + + ED K+ DF LAR K
Sbjct: 107 IDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFG-----LARLIKEDV 158
Query: 525 TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS 562
L S I P + + ++++FG+LL E+ +
Sbjct: 159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 75/327 (22%), Positives = 136/327 (41%), Gaps = 48/327 (14%)
Query: 325 IPWK--KSASEKDHIYIDSEILKDVVR--FSRQELEVACEDFSNIIGSSPDSLVYKGTMK 380
+ WK +S + +++YID L ++ F R L F +G+ V + T
Sbjct: 3 VRWKVIESINGNEYVYIDPTQLPYDLKWEFPRNNLS-----FGKTLGAGAFGKVVEATAY 57
Query: 381 G-GPEIAVISLCIKEEHWTGYLELYFQRE--VADLARI----NHENTGKLLGYCRESSPF 433
G AV+ + +K T + +RE +++L + NHEN LLG C P
Sbjct: 58 GLSKSDAVMKVAVKMLKPTAHSS---EREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+++ +Y G L L ++ + +A+G+ +L ++ +L +
Sbjct: 115 --LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 169
Query: 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-----CILPSSLEARHLDVQG 548
V LT K+ DF LAR N +G + P S+ +
Sbjct: 170 RNVLLTHGKIVKICDFG-----LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 224
Query: 549 NIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVD-PELKHFSYDDLKV 606
+++++G+LL EI S G P G VD +K Y + E Y + PE + +
Sbjct: 225 DVWSYGILLWEIFSLGSNPY---PGMPVD-SKFYKLIKE--GYRMAQPE---HAPAE--- 272
Query: 607 ICEVVNLCVNPDITKRPSMQELCTMLE 633
I +++ C + D KRP+ +++ ++
Sbjct: 273 IYDIMKTCWDADPLKRPTFKQIVQLIG 299
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 3e-04
Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 47/241 (19%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHYGERCQVSW 461
EV L ++NH N K ES F +V +YA G L + + ++ +
Sbjct: 47 LNEVKILKKLNHPNIIK----YYES--FEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPF 100
Query: 462 TRR--MKIVIGIARGLKYLHTELGPPFTI--SELNSSAVYLTEDFSPKLVDFDSWKTILA 517
+ + + LKYLH+ I ++ ++LT + KL DF ++
Sbjct: 101 PEEQILDWFVQLCLALKYLHSR-----KILHRDIKPQNIFLTSNGLVKLGDFG-----IS 150
Query: 518 RSEKNPGTLGS--QGAICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574
+ + L G L P + + + + +I++ G +L E+ + + P +
Sbjct: 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--- 207
Query: 575 VDWAKDYLELPEVMSYVV----DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630
L E+ ++ P +S +L+ +V+ + D +RPS+ ++
Sbjct: 208 ---------LLELALKILKGQYPPIPSQYS-SELR---NLVSSLLQKDPEERPSIAQILQ 254
Query: 631 M 631
Sbjct: 255 S 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 3e-04
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-HYGERCQVSWTRRM 465
+E+ L ++NH N K E + +V + A G L + H+ ++ ++ + +
Sbjct: 51 KEIDLLKQLNHPNVIKYYASFIEDNELN--IVLELADAGDLSRMIKHFKKQKRLIPEKTV 108
Query: 466 -KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
K + + L+++H+ ++ + V++T KL D + +++
Sbjct: 109 WKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 165
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK----- 579
+G+ + P + + + +I++ G LL E+ + + P DK NL K
Sbjct: 166 LVGTPYYMS--PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC 223
Query: 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625
DY LP H+S ++L+ ++VN+C+NPD KRP +
Sbjct: 224 DYPPLPS----------DHYS-EELR---QLVNMCINPDPEKRPDI 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 25/174 (14%)
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-----HYGER 456
+L F +EV +NH N + LG C ES P+ +LV ++ G L +L +
Sbjct: 39 QLLFLQEVQPYRELNHPNVLQCLGQCIESIPY--LLVLEFCPLGDLKNYLRSNRGMVAQM 96
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516
Q +RM +A GL +LH F S+L LT D S K+ D+ L
Sbjct: 97 AQKDVLQRM--ACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYG---LAL 148
Query: 517 ARSEKNPGTLGSQGAI---CILPSSLEARHLDV-------QGNIYAFGVLLLEI 560
+ ++ A+ + P +E R D+ + NI++ GV + E+
Sbjct: 149 EQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWEL 202
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 26/87 (29%)
Query: 550 IYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD---PELKH---FSY 601
I++ G++ +E+ G PP YL P + + P LK+ +S
Sbjct: 199 IWSLGIMCIEMAEGEPP--------------YLREPPLRALFLITTKGIPPLKNPEKWS- 243
Query: 602 DDLKVICEVVNLCVNPDITKRPSMQEL 628
+ +N C+ D KRPS +EL
Sbjct: 244 ---PEFKDFLNKCLVKDPEKRPSAEEL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 34/175 (19%)
Query: 465 MKIVIGIARGLKYLHTEL-------GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517
I I +GL YLHT+ P S + + K+ DF K +
Sbjct: 102 AYIARQILKGLDYLHTKRHIIHRDIKP---------SNLLINSKGEVKIADFGISKVLEN 152
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW 577
++ +G+ + P ++ +I++ G+ LLE G+ P G +
Sbjct: 153 TLDQCNTFVGT--VTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPF-LPPGQPSFF 209
Query: 578 A-KDYL---ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ P + + PE + F ++ C+ D KRPS EL
Sbjct: 210 ELMQAICDGPPPSLPAEEFSPEFRDF-----------ISACLQKDPKKRPSAAEL 253
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 36/233 (15%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKG-----TMKGGPEIAVISL--CIKEEHWTGYLELYFQ 406
EL ++ F +G +YKG M +A+ +L + W FQ
Sbjct: 1 ELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE-----FQ 55
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-----HYGERCQVSW 461
+E + +A ++H N LLG + P ++F+Y + G L+E L H C
Sbjct: 56 QEASLMAELHHPNIVCLLGVVTQEQPVC--MLFEYLNQGDLHEFLIMRSPHSDVGCSSDE 113
Query: 462 TRRMK----------IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
+K I I IA G++YL + F +L + + + E K+ D
Sbjct: 114 DGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGL 170
Query: 512 WKTILARS--EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
+ I + P +L + P ++ +I++FGV+L EI S
Sbjct: 171 SREIYSADYYRVQPKSL--LPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 7e-04
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 96 LQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKI 147
L++L+L N L G + K L + LK L+L N + + + L +
Sbjct: 139 LEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVL 198
Query: 148 NLQSNGLT----GRLPAELGNLISLEELHLDRNRL 178
+L +NGLT L L +L SLE L+L N L
Sbjct: 199 DLNNNGLTDEGASALAETLASLKSLEVLNLGDNNL 233
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 366 IGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+G +V +G GG I V C+K + + ++ F +E A + ++HEN +L
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMD-DFLKEAAIMHSLDHENLIRL 61
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
G M+V + A G+L + L + + IA G++YL
Sbjct: 62 YGVVLTHP---LMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE 114
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 49/239 (20%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+E+ L + H N K +G S ++ +YA NG+L + + S
Sbjct: 46 IMQEIDLLKNLKHPNIVKYIGSIETSDSL--YIILEYAENGSLRQIIKKFGPFPESLVAV 103
Query: 465 MKIVIGIARGLKYLHTELGPPFTI--SELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
V + +GL YLH + + ++ ++ + T+D KL DF T L K+
Sbjct: 104 Y--VYQVLQGLAYLHEQ-----GVIHRDIKAANILTTKDGVVKLADFGV-ATKLNDVSKD 155
Query: 523 PGTLGSQG-----AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW 577
+ G A P +E +I++ G ++E+++G PP +L
Sbjct: 156 DAS--VVGTPYWMA----PEVIEMSGASTASDIWSLGCTVIELLTGNPP----YYDLNPM 205
Query: 578 A-------KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELC 629
A D+ LPE +S PELK F C D RP+ ++L
Sbjct: 206 AALFRIVQDDHPPLPEGIS----PELKDFLM-----------QCFQKDPNLRPTAKQLL 249
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT-GLVKIN 148
L L L L L+ N L I + L L L LDL N +T IPP IG L L +++
Sbjct: 89 LLNLLPLPSLDLNLNRLRSNISELLEL-TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELD 146
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
L N + LP+ L NL +L+ L L N L SN
Sbjct: 147 LSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNL 185
|
Length = 394 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.001
Identities = 57/280 (20%), Positives = 111/280 (39%), Gaps = 29/280 (10%)
Query: 366 IGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
+G +VY+G KG PE V + E + + F E + + N +
Sbjct: 14 LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 72
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHY------GERCQV--SWTRRMKIVIGIAR 473
+LLG + P +++ + + G L +L Q S + +++ IA
Sbjct: 73 RLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC 533
G+ YL+ F +L + + EDF+ K+ DF + I G G
Sbjct: 131 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 534 ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593
+ P SL+ ++++FGV+L EI L + + +V+ +V++
Sbjct: 188 MSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQPYQGMSNEQVLRFVME 236
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
L + ++ E++ +C + RPS E+ + ++
Sbjct: 237 GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.001
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC--------------QVSWT 462
H+N LLG C + P ++ +YAS G L E+L Q+++
Sbjct: 80 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFK 137
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
+ +ARG++YL ++ +L + V +TE+ K+ DF LAR N
Sbjct: 138 DLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG-----LARDVNN 189
Query: 523 -----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEI--ISGRP 565
T G + P +L R Q ++++FGVL+ EI + G P
Sbjct: 190 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 239
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 40/193 (20%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
+V +YA NG L++ L + + + I I GL +LH++ I LN +
Sbjct: 76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLN---L 132
Query: 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVL 556
+L + K+ D K + + +G+ + P E + + + +++A GV+
Sbjct: 133 FLDAYDNVKIGDLGVAKLLSDNTNFANTIVGT--PYYLSPELCEDKPYNEKSDVWALGVV 190
Query: 557 LLEIISGRPPC-CKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCV 615
L E +G+ P ++G L+ +++ V P + +S + ++++ C+
Sbjct: 191 LYECCTGKHPFDANNQGALIL---------KIIRGVFPPVSQMYSQQ----LAQLIDQCL 237
Query: 616 NPDITKRPSMQEL 628
D +RP +L
Sbjct: 238 TKDYRQRPDTFQL 250
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 37/178 (20%)
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR------- 464
L ++NH + KL G C + P +L+ +YA G+L L + S+
Sbjct: 57 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSS 114
Query: 465 -----------MKIVIG----IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509
M +I I+RG++YL E+ +L + V + E K+ DF
Sbjct: 115 YLDNPDERALTMGDLISFAWQISRGMQYL-AEM--KLVHRDLAARNVLVAEGRKMKISDF 171
Query: 510 DSWKTILARS--EKNPGTLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS 562
L+R E++ S+G I + SL Q ++++FGVLL EI++
Sbjct: 172 G-----LSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 47/253 (18%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTR 463
F+RE+ L + H+N K G C + LV +Y G+L ++L + ER R
Sbjct: 52 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLD---HR 108
Query: 464 RMKIVIG-IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE-- 520
++ + I +G++YL ++ + +L + + + + K+ DF K + E
Sbjct: 109 KLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYY 165
Query: 521 --KNPGTLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEI-----ISGRPPC----- 567
+ PG + I P SL V ++++FGV+L E+ S PP
Sbjct: 166 KVREPG----ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRM 221
Query: 568 --CKDKG-----NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDIT 620
+G +L++ K+ LP P I ++ C N D +
Sbjct: 222 MGNDKQGQMIVYHLIELLKNNGRLPA-------PP------GCPAEIYAIMKECWNNDPS 268
Query: 621 KRPSMQELCTMLE 633
+RPS EL +E
Sbjct: 269 QRPSFSELALQVE 281
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-RCQ----- 458
F +E+ ++R+ + N +LLG C P ++ +Y NG L + L E
Sbjct: 64 FLKEIKIMSRLKNPNIIRLLGVCVSDDPLC--MITEYMENGDLNQFLSQREIESTFTHAN 121
Query: 459 ----VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
VS + + + IA G+KYL + F +L + + ++ K+ DF
Sbjct: 122 NIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLVGNHYTIKIADFG---- 174
Query: 515 ILARSEKNPGTLGSQGAICILP------SSLEARHLDVQGNIYAFGVLLLEIISGRPPCC 568
++R+ + QG +LP S+ +++AFGV L E+ + C
Sbjct: 175 -MSRNLYSGDYYRIQGR-AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT----LC 228
Query: 569 KDK 571
K++
Sbjct: 229 KEQ 231
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 22/199 (11%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V+ GT G ++AV +L K G + F +E + ++ H+ +L C E P
Sbjct: 22 VWMGTWNGTTKVAVKTL--KP----GTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEP 75
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
+V +Y S G+L + L GE ++ + + + IA G+ YL + + +L
Sbjct: 76 I--YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLA 130
Query: 493 SSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA-ICILPSSLEA---RHLDVQG 548
+ + + E+ K+ DF LAR ++ +GA I ++ EA ++
Sbjct: 131 ARNILVGENLVCKIADFG-----LARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKS 185
Query: 549 NIYAFGVLLLEIIS-GRPP 566
++++FG+LL EI++ GR P
Sbjct: 186 DVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------- 455
F +EV L+R++ N +LLG C P ++ +Y NG L + L
Sbjct: 66 FLKEVKILSRLSDPNIARLLGVCTVDPPL--CMIMEYMENGDLNQFLQKHVAETSGLACN 123
Query: 456 RCQVSWTRRMKIVIGIARGLKYL 478
+S++ + + IA G++YL
Sbjct: 124 SKSLSFSTLLYMATQIASGMRYL 146
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.004
Identities = 50/228 (21%), Positives = 100/228 (43%), Gaps = 32/228 (14%)
Query: 406 QREVADLARINHENTGKLLG-YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
Q+E+ L++ + K G Y +++ + ++ +Y G+ + L G + T+
Sbjct: 50 QQEITVLSQCDSPYVTKYYGSYLKDTKLW---IIMEYLGGGSALDLLEPGP---LDETQI 103
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
I+ I +GL YLH+E ++ ++ V L+E KL DF + K
Sbjct: 104 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 160
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584
+G+ + P ++ D + +I++ G+ +E+ G PP + EL
Sbjct: 161 FVGT--PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPP--------------HSEL 204
Query: 585 -PEVMSYVV---DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
P + +++ +P +Y K + E V C+N + + RP+ +EL
Sbjct: 205 HPMKVLFLIPKNNPPTLEGNYS--KPLKEFVEACLNKEPSFRPTAKEL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 20/194 (10%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V+KGT+K +AV + C +E L++ F E L + +H N KL+G C + P
Sbjct: 11 VFKGTLKDKTPVAVKT-C--KEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPI 67
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+V + G L ++ ++ + +K + A G+ YL ++ +L +
Sbjct: 68 --YIVMELVPGGDFLSFLR-KKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAA 121
Query: 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI-----LPSSLEARHLDVQG 548
+ E+ K+ DF ++R E + G S G I P +L +
Sbjct: 122 RNCLVGENNVLKISDFG-----MSRQEDD-GIYSSSGLKQIPIKWTAPEALNYGRYSSES 175
Query: 549 NIYAFGVLLLEIIS 562
+++++G+LL E S
Sbjct: 176 DVWSYGILLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWT 462
H+N LLG C + P ++ +YA+ G L E L Q+S+
Sbjct: 77 HKNIINLLGVCTQEGPL--YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFK 134
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
+ +ARG++YL + +L + V +TED K+ DF + +
Sbjct: 135 DLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK 191
Query: 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEI--ISGRP 565
+ G + P +L R Q ++++FG+L+ EI + G P
Sbjct: 192 KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 658 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.98 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.98 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.98 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.95 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.95 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.94 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.93 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.93 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.93 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.92 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.89 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.89 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.87 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.86 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.86 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.86 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.85 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.85 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.84 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.84 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.82 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.82 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.8 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.8 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.79 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.77 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.76 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.75 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.75 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.73 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.73 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.72 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.69 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.65 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.64 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.63 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.62 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.61 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.6 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.49 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.49 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.49 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.47 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.47 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.47 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.42 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.42 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.37 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.35 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.33 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.31 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.3 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.29 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.26 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.26 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.25 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.24 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.23 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.21 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.18 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.14 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.13 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.12 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.05 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.05 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.04 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.04 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.03 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.0 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.98 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.98 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.97 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.95 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.93 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.92 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.9 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.87 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.85 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.84 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.83 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.81 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.8 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.8 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.78 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.78 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.76 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.66 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.63 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.62 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.52 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.4 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.39 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 98.37 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.35 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.34 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.28 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.24 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.22 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 98.22 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.21 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.18 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.15 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-62 Score=579.23 Aligned_cols=527 Identities=24% Similarity=0.430 Sum_probs=342.4
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCC---------
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL--------- 141 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l--------- 141 (658)
+++.|++++|.+.+.+|..++.+++|+.|+|++|++++.+|..|..+++|++|||++|+++|.+|..+..+
T Consensus 381 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 460 (968)
T PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLA 460 (968)
T ss_pred CCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECc
Confidence 45556666666666666666666666666666666655555555555555555555555555555444333
Q ss_pred --------------cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-
Q 006178 142 --------------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG- 206 (658)
Q Consensus 142 --------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~- 206 (658)
++|+.|+|++|++++.+|..+.++++|+.|+|++|+++|.+|..... ..++..+++++|.+++
T Consensus 461 ~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~ 538 (968)
T PLN00113 461 RNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSS--CKKLVSLDLSHNQLSGQ 538 (968)
T ss_pred CceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcC--ccCCCEEECCCCccccc
Confidence 45566666666666667777777777777777777777777754321 2456677888888765
Q ss_pred ----ccCCCCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCCCCccc------------cccccCCCCCCCCcCC
Q 006178 207 ----LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNKDPKQ------------RATTLCGGAPPARTRA 267 (658)
Q Consensus 207 ----~~~l~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~~~~~~------------~~~~~c~~~~~~~~~~ 267 (658)
+.++++|+.|||++|+++|.+|..+.. |..+++++|.+.+..|.. .+...|++..+..
T Consensus 539 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~--- 615 (968)
T PLN00113 539 IPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG--- 615 (968)
T ss_pred CChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccC---
Confidence 456788888888888888888877655 455678888777655431 1122343211000
Q ss_pred CCCcccccccccccCCCCCCcccceeeeeeechhhhHHHHHhhhheeeeccCCCCcccccccCCCCcCccccchhhhccc
Q 006178 268 GLSPKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDSEILKDV 347 (658)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (658)
.+++ ... .+...+.+++++++++++++++++++++++++++... ...... +...+..........
T Consensus 616 ------~~~c---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~ 680 (968)
T PLN00113 616 ------LPPC---KRV-RKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLE--LKRVEN---EDGTWELQFFDSKVS 680 (968)
T ss_pred ------CCCC---ccc-cccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccc--cccccc---ccccccccccccccc
Confidence 0000 001 1112232222222222222222222233332222110 000000 000010000000111
Q ss_pred ccccHHHHHHHHhhhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeE
Q 006178 348 VRFSRQELEVACEDFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (658)
Q Consensus 348 ~~~~~~~l~~~~~~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~ 426 (658)
..++++++.... ...++||+|+||.||+|+. .++..||||++..... ....|++++++++|||||+++|+
T Consensus 681 ~~~~~~~~~~~~-~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~ 751 (968)
T PLN00113 681 KSITINDILSSL-KEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGL 751 (968)
T ss_pred hhhhHHHHHhhC-CcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEE
Confidence 235556655432 2347899999999999997 4788999998743221 12346889999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCcee
Q 006178 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKL 506 (658)
Q Consensus 427 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl 506 (658)
|.+.+ ..++||||+++|+|.++++ .++|.++.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++
T Consensus 752 ~~~~~--~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 752 CRSEK--GAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred EEcCC--CCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 98877 6799999999999999996 3899999999999999999999766679999999999999999988887
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCC---CCcHHHHHHHhhc
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD---KGNLVDWAKDYLE 583 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~---~~~~~~~~~~~~~ 583 (658)
. ||.+...... ....++..|+|||++.+..++.++|||||||++|||+||+.||+.. .....+|.+....
T Consensus 825 ~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 897 (968)
T PLN00113 825 R-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS 897 (968)
T ss_pred E-eccccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC
Confidence 5 6654332111 1123456799999999999999999999999999999999998543 2456677665443
Q ss_pred CCcccccccCCcCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 584 LPEVMSYVVDPELK---HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 584 ~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
. .......++.+. ..+.+...++.+++.+||+.||++||||+||+++|+++.....+
T Consensus 898 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~ 957 (968)
T PLN00113 898 D-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSS 957 (968)
T ss_pred c-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccc
Confidence 3 223344555443 23456677889999999999999999999999999998775443
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-54 Score=448.22 Aligned_cols=286 Identities=37% Similarity=0.601 Sum_probs=242.6
Q ss_pred ccccccHHHHHHHHhhhc--ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccce
Q 006178 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (658)
Q Consensus 346 ~~~~~~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 423 (658)
....|+++++..+|++|+ +.||+|+||.||+|..++|..||||++...... . .++|.+|++++.+++|||+|++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~--~--~~eF~~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ--G--EREFLNEVEILSRLRHPNLVKL 136 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc--c--hhHHHHHHHHHhcCCCcCcccE
Confidence 456799999999999998 799999999999999999999999977443321 1 3469999999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
+|||.+.+. +.+||||||++|+|.++|+.....+++|.+|++||.++|+||+|||..+.|+||||||||+|||||++++
T Consensus 137 lGyC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 137 LGYCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 999998773 3799999999999999998655437999999999999999999999999999999999999999999999
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCC----CCcHHHHHH
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD----KGNLVDWAK 579 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~----~~~~~~~~~ 579 (658)
+||+|||+|+..... .........++..|+|||++..+..++|+|||||||+|+||+||+.|.+.. ...+..|+.
T Consensus 216 aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred EEccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 999999999764321 111111003445589999999999999999999999999999999988642 345889987
Q ss_pred HhhcCCcccccccCCcCC--CCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 580 DYLELPEVMSYVVDPELK--HFSY-DDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...... .+.+++|+.+. .++. +....+..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 295 ~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 295 PLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 777664 78889999985 4454 6788899999999999999999999999999765543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-49 Score=384.22 Aligned_cols=258 Identities=20% Similarity=0.268 Sum_probs=210.3
Q ss_pred cccHHHHHHHHhhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE
Q 006178 349 RFSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (658)
Q Consensus 349 ~~~~~~l~~~~~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 427 (658)
.++..|++.. +.||+|..|+|||++++. ++.+|.|.+.. ..+....+++.+|++++++++||+||++||.|
T Consensus 75 ~i~~~dle~~-----~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~---~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF 146 (364)
T KOG0581|consen 75 GISLSDLERL-----GVLGSGNGGTVYKVRHKPTGKIYALKVILL---NIDPALQKQILRELEILRSCQSPYIVGFYGAF 146 (364)
T ss_pred ccCHHHhhhh-----hhcccCCCcEEEEEEEcCCCeEEEEEeecc---cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEE
Confidence 3566677644 689999999999999985 55667776632 23345678899999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCcee
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKL 506 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl 506 (658)
+.... ...|+||||++|||++++...+ .+++...-+|+.+|++||.|||+ + +||||||||+|||++..|++||
T Consensus 147 ~~~~~-~isI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKi 220 (364)
T KOG0581|consen 147 YSNGE-EISICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKI 220 (364)
T ss_pred EeCCc-eEEeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEe
Confidence 98773 4899999999999999998654 49999999999999999999996 6 9999999999999999999999
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
||||.++.+... ......++..|||||.+.+..|+.++||||||++++|+.+|+.||.........|..
T Consensus 221 cDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~------- 289 (364)
T KOG0581|consen 221 CDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFE------- 289 (364)
T ss_pred ccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHH-------
Confidence 999999987543 233345677899999999999999999999999999999999999764222222211
Q ss_pred ccccccCCcCCCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 VMSYVVDPELKHFSYD-DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+..+++..-...|.. .++++.+++..||++||.+|||+.|++++
T Consensus 290 Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 290 LLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1222333223333443 67889999999999999999999999876
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-48 Score=401.14 Aligned_cols=256 Identities=23% Similarity=0.352 Sum_probs=209.6
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecC
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~ 443 (658)
+.||+|+||+||+|.+++...||||++......... .+.|.+|+.+|.+++|||||+++|+|.++.. ..++||||++
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~--~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVtEy~~ 123 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES--RKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVTEYMP 123 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHH--HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEEEeCC
Confidence 569999999999999987666999998655433222 6789999999999999999999999987652 4699999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-eeeccCCCcceeecCCC-CceeccccchhhhhhcCCC
Q 006178 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP-FTISELNSSAVYLTEDF-SPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~ 521 (658)
+|+|.++++...+..+++..+++|+.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 99999999874445799999999999999999999999 7 99999999999999997 99999999998754322
Q ss_pred CCCcccccCccccCCcccc--cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NPGTLGSQGAICILPSSLE--ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~--~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.......+++.|||||++. ...|+.|+|||||||++|||+||+.||...... +.+.... .......+
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~--~~~~~v~---------~~~~Rp~~ 267 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV--QVASAVV---------VGGLRPPI 267 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH--HHHHHHH---------hcCCCCCC
Confidence 2223345678999999999 568999999999999999999999999765431 1111111 01111223
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+..++..+..++.+||+.||++||++.||+..|+.+...
T Consensus 268 p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 268 PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 444667888999999999999999999999999987653
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-49 Score=399.53 Aligned_cols=255 Identities=22% Similarity=0.329 Sum_probs=215.2
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|-||.||.|.+++...||+|.++..... .+.|.+|+++|++++|+|||+++|+|..++ -++||||
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~--piyIVtE 281 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-----PEAFLREAQIMKKLRHEKLVKLYGVCTKQE--PIYIVTE 281 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccccC-----hhHHHHHHHHHHhCcccCeEEEEEEEecCC--ceEEEEE
Confidence 356889999999999999999889999999765432 457899999999999999999999999877 4699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
||+.|+|.++|+...+..+...+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+|||+|+.. .+..
T Consensus 282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~-~d~~ 357 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLI-GDDE 357 (468)
T ss_pred ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccccc-CCCc
Confidence 99999999999986666799999999999999999999999 9999999999999999999999999999943 3333
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......+..+..|+|||.+..+.++.|||||||||+||||+| |+.||..... .+.+.. +-.......
T Consensus 358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--~ev~~~----------le~GyRlp~ 425 (468)
T KOG0197|consen 358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--EEVLEL----------LERGYRLPR 425 (468)
T ss_pred eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--HHHHHH----------HhccCcCCC
Confidence 333344445678999999999999999999999999999999 8999865432 111111 111222245
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
|..++.++.++|..||+.+|++|||++.+...|+++...
T Consensus 426 P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 426 PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 677889999999999999999999999999999887654
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-47 Score=370.77 Aligned_cols=197 Identities=21% Similarity=0.376 Sum_probs=173.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+|+++ ++..||||.+..+.- .....+.+..|+.+|+.++|||||+++++++.++ ..|+|||
T Consensus 14 ~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~--~i~lVME 89 (429)
T KOG0595|consen 14 LSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD--FIYLVME 89 (429)
T ss_pred ehhhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC--eEEEEEE
Confidence 3467999999999999987 578999999866542 2345667899999999999999999999999988 8999999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC------CCceeccccchhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED------FSPKLVDFDSWKT 514 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~------~~~kl~DFGla~~ 514 (658)
||.+|||.+|++.+++ +++...+.++.|+|.||++||++ +||||||||+||||+.. -.+||+|||+|+.
T Consensus 90 yC~gGDLs~yi~~~~~--l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGR--LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred eCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999997764 99999999999999999999999 99999999999999865 4579999999998
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~ 570 (658)
+... .......+++.|||||++..++|+.|+|+||.|+|+|+|++|+.||+..
T Consensus 165 L~~~---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 165 LQPG---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred CCch---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 7522 2223345678999999999999999999999999999999999999743
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=349.21 Aligned_cols=256 Identities=17% Similarity=0.223 Sum_probs=207.1
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..++||+|+||+|||+.. .+|..+|.|++. ....+....++...|+.+|++++|||||++++....++....+||||
T Consensus 23 Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~--f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE 100 (375)
T KOG0591|consen 23 ILKKIGRGSFGEVYKVQCLLDGKLVALKKIQ--FGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVME 100 (375)
T ss_pred HHHHHcCCcchheEEeeeccCcchhhhhhcc--hhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHH
Confidence 447899999999999995 588999999986 33345566788999999999999999999999443333324899999
Q ss_pred ecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 441 YASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 441 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
||..|||.+.++. .++..+++.++++++.|+++||.++|.+ -+. |+||||||.||+++.+|.+||+|||+++.+.
T Consensus 101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999973 3445799999999999999999999993 224 9999999999999999999999999999875
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
..... .....+++.||+||.+.+..|+.||||||+||++|||+.-++||.++ ++.+.-+.. ...+.
T Consensus 180 s~~tf--A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI----------~qgd~ 245 (375)
T KOG0591|consen 180 SKTTF--AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKI----------EQGDY 245 (375)
T ss_pred chhHH--HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHH----------HcCCC
Confidence 43322 33345678899999999999999999999999999999999999765 333332221 12233
Q ss_pred CCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 597 KHFS-YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 597 ~~~~-~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.+.| ...+..+..|+..|+..||+.||+...+++.+..
T Consensus 246 ~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 3444 5567889999999999999999996666666554
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=400.38 Aligned_cols=259 Identities=25% Similarity=0.361 Sum_probs=219.2
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
|.+.||+|+||+||+|+.. +...||||.++.+. +.+.+++|++|++++..++|||||+++|+|.+++| .
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a---~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P--~ 564 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA---ENQARQDFRREAELLAELQHPNIVRLLGVCREGDP--L 564 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc---cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe--e
Confidence 5578999999999999864 34578999885433 33467899999999999999999999999999995 4
Q ss_pred EEEEEecCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
++|+|||..|||.++|+.+. +.+++..+.+.||.|||.||+||-++ .+|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 99999999999999997321 23489999999999999999999999 9999999999999999999
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhh
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYL 582 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 582 (658)
+||+|||+++.+.....+........+.+||+||.+..++||++||||||||||||++| |+.||.+...+
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--------- 712 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--------- 712 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH---------
Confidence 99999999998765544433333345678999999999999999999999999999999 99999764332
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
+.+..+....+.+.|+.++.++++||..||+.+|++||+++||-.+|+.....++
T Consensus 713 ---EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 713 ---EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred ---HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 3333444555567788899999999999999999999999999999998776543
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=379.95 Aligned_cols=248 Identities=17% Similarity=0.231 Sum_probs=205.7
Q ss_pred hhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.-.+.||+|||+.||+++. ..|..||+|.+..+.- ......+.+.+|++|.++++|||||+++++|++.+ .+|||.
T Consensus 21 ~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l-~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~--nVYivL 97 (592)
T KOG0575|consen 21 KRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL-KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN--NVYIVL 97 (592)
T ss_pred eeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh-cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC--ceEEEE
Confidence 3358999999999999998 7889999998865432 23345667899999999999999999999999998 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+|++|+|..+++++ .++++.+++.+++||+.||.|||++ +|+|||||..|+++++++++||+|||+|..+....
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 999999999999843 4699999999999999999999999 99999999999999999999999999999876444
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
+..... .+++-|.|||++.....+..+||||+|||||-|++|++||.... +.+-......... .+
T Consensus 173 Erk~Tl--CGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--vkety~~Ik~~~Y-----------~~ 237 (592)
T KOG0575|consen 173 ERKKTL--CGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--VKETYNKIKLNEY-----------SM 237 (592)
T ss_pred ccccee--cCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--HHHHHHHHHhcCc-----------cc
Confidence 443333 35567999999999999999999999999999999999996432 1111111111111 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
|...+.+..+||.++|+.||.+|||+++|+..
T Consensus 238 P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 238 PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 33445678899999999999999999999875
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-45 Score=359.13 Aligned_cols=249 Identities=17% Similarity=0.231 Sum_probs=197.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc-c--hhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-T--GYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.++.||+|+||.|-+|..+ +|+.||||.+....... . ........+|+++|++++|||||++++++..++ ..||
T Consensus 176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d--s~Ym 253 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD--SSYM 253 (475)
T ss_pred eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC--ceEE
Confidence 3589999999999999975 68899999886544221 1 112334679999999999999999999999988 7799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~ 514 (658)
||||++||+|.+.+-.++. +.+..-..+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+|+.
T Consensus 254 VlE~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 254 VLEYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred EEEEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 9999999999999986654 78888899999999999999999 99999999999999866 6799999999998
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCC---CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHL---DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~---~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
... .......++++.|.|||++.+..+ ..+.|+||+|||||-+++|.+||.+...+. .....+
T Consensus 329 ~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-----------sl~eQI 394 (475)
T KOG0615|consen 329 SGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-----------SLKEQI 394 (475)
T ss_pred ccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-----------cHHHHH
Confidence 642 122223345677999999987543 348899999999999999999997643321 011112
Q ss_pred cCCcCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELK---HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... ....+..++..++|.+||..||++|||+.|+++.
T Consensus 395 ~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 395 LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 222221 1234567889999999999999999999999875
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=334.47 Aligned_cols=255 Identities=19% Similarity=0.253 Sum_probs=198.6
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
.++|+|+||.|||+++++ |+.||||++...++ +....+-..+|+++|++++|+|+|.++.+|.... ..++|+|||
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed--d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr--klhLVFE~~ 83 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED--DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR--KLHLVFEYC 83 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCc--cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc--eeEEEeeec
Confidence 578999999999999875 78899999865443 3455667899999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
+. ++.+-+..... .++...+.+++.|+++|+.|+|++ ++|||||||+|||++.++.+||||||+|+.+....+..
T Consensus 84 dh-TvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 84 DH-TVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ch-HHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 87 55555554443 589999999999999999999999 99999999999999999999999999999986543333
Q ss_pred CCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHh-----------hcCCccc
Q 006178 523 PGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDY-----------LELPEVM 588 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~-----------~~~~~~~ 588 (658)
.. ...+.+|+|||.+.+ .+|++.+||||.||++.||+||.+-|.+..+ +.+. ++.. +......
T Consensus 159 TD--YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD-iDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 159 TD--YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD-IDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred hh--hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch-HHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 32 334567899999987 7899999999999999999999999876543 1111 1111 1111111
Q ss_pred ccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 589 SYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 589 ~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+.-|...+ ..+....-+.+++..|++.||.+|++.+|++.
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111122211 12234457889999999999999999999885
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-44 Score=366.19 Aligned_cols=257 Identities=24% Similarity=0.395 Sum_probs=207.1
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
.+.||+|+||+||+|++.+ .||||.+...... ....+.|++|+.++++-+|.||+-+.|||..+. . .||+.+|
T Consensus 397 ~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt--~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~--~-AIiTqwC 469 (678)
T KOG0193|consen 397 GERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPT--PEQLQAFKNEVAVLKKTRHENILLFMGACMNPP--L-AIITQWC 469 (678)
T ss_pred cceeccccccceeeccccc--ceEEEEEecCCCC--HHHHHHHHHHHHHHhhcchhhheeeehhhcCCc--e-eeeehhc
Confidence 4789999999999999864 6999998655432 335678999999999999999999999998876 4 9999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
+|.+|+.+++-.+ ..+...+...||+|||+|+.|||.+ +|||||||..||++.+++.+||+|||++..-.--....
T Consensus 470 eGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~ 545 (678)
T KOG0193|consen 470 EGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ 545 (678)
T ss_pred cCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence 9999999998554 3689999999999999999999999 99999999999999999999999999986533222222
Q ss_pred CCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 523 PGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....++...|||||++.. .+|++.+||||||+|+|||+||..||.....+..-|+. . .....+++...
T Consensus 546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV---G-----rG~l~pd~s~~ 617 (678)
T KOG0193|consen 546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV---G-----RGYLMPDLSKI 617 (678)
T ss_pred ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe---c-----ccccCccchhh
Confidence 2233345677999999874 46999999999999999999999999743322211110 0 01112222233
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+++++.+|+..||..++++||.+.+|+..|+++...
T Consensus 618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 618 RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 456778899999999999999999999999999988874
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=347.46 Aligned_cols=239 Identities=22% Similarity=0.233 Sum_probs=196.4
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.++||+|+||+||+++.++ ++.+|+|.+.++. .......+...+|..+|.+++||.||+++-.|++.+ ..|+|+||
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~-iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~--kLylVld~ 106 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK-IVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE--KLYLVLDY 106 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhH-hhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC--eEEEEEec
Confidence 3899999999999999875 5667777765443 223345667899999999999999999999999888 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.||.|.-+|.+.+. +++..+.-++.+|+.||.|||++ +||||||||+|||+|++|+++|+|||+++........
T Consensus 107 ~~GGeLf~hL~~eg~--F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~ 181 (357)
T KOG0598|consen 107 LNGGELFYHLQREGR--FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA 181 (357)
T ss_pred cCCccHHHHHHhcCC--cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccCCCc
Confidence 999999999986654 99999999999999999999999 9999999999999999999999999999865433322
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.. ..++++.|||||++.+..|+..+|.||+||++|||++|.+||...+ ...+.......+ +...+.
T Consensus 182 t~--tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~--~~~~~~~I~~~k----------~~~~p~ 247 (357)
T KOG0598|consen 182 TR--TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED--VKKMYDKILKGK----------LPLPPG 247 (357)
T ss_pred cc--cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc--HHHHHHHHhcCc----------CCCCCc
Confidence 22 2456788999999999999999999999999999999999997543 233333333221 222233
Q ss_pred HHHHHHHHHHHHccCCCCCCCC
Q 006178 602 DDLKVICEVVNLCVNPDITKRP 623 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RP 623 (658)
-...+..+++.+.++.||++|-
T Consensus 248 ~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 248 YLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred cCCHHHHHHHHHHhccCHHHhc
Confidence 3456788999999999999995
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=352.84 Aligned_cols=257 Identities=19% Similarity=0.247 Sum_probs=202.7
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|+||.||++...+ |...|||.+...... ..+.+.+|+.+|++++|||||+++|.....+....++.||
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~----~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP----TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccch----hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34789999999999999865 888999988554211 1456889999999999999999999754443224789999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~ 519 (658)
|+++|+|.+++.+.+. .+++..++++.+||++||+|||++ +||||||||+|||++. ++.+||+|||+++......
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999997775 699999999999999999999999 9999999999999999 7999999999998765311
Q ss_pred CC-CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EK-NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~-~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.. .......+++.|||||++..+ ....++||||+||++.||+||++||... .....+..... .....+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig---------~~~~~P 242 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIG---------REDSLP 242 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHh---------ccCCCC
Confidence 11 122234456889999999964 3446999999999999999999999653 11122211111 111222
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.++...+.+..+++.+|++.||++|||+.++++..--..
T Consensus 243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 243 EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 455556778899999999999999999999998865443
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=352.61 Aligned_cols=260 Identities=18% Similarity=0.173 Sum_probs=200.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
++||+|+||.||||++. +|+.||+||+...... .....-..+||.||++++||||+++.+...+......|||+|||
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~--~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYM 200 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK--EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYM 200 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCC--CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecc
Confidence 68999999999999965 6889999999654422 22344578999999999999999999999887434789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
+. ||..++... ...+++.++..+++|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+.+......
T Consensus 201 dh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~- 274 (560)
T KOG0600|consen 201 DH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA- 274 (560)
T ss_pred cc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCCCCc-
Confidence 87 999988743 34699999999999999999999999 9999999999999999999999999999987544332
Q ss_pred CCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCccccc--------c
Q 006178 523 PGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSY--------V 591 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~--------~ 591 (658)
..+....+.+|+|||.+.+ ..|+.+.|+||.||||.||++|++.|.+..+ .+....+..-...+.... .
T Consensus 275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence 2344556788999999987 4699999999999999999999999975432 111111111111111111 1
Q ss_pred cCC------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDP------ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.+ .+.+.....+....+|+..+|..||.+|.|+.++++.
T Consensus 355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 111 0111112234567899999999999999999988753
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=378.19 Aligned_cols=269 Identities=20% Similarity=0.338 Sum_probs=222.0
Q ss_pred HHHHHHhhhcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEec
Q 006178 354 ELEVACEDFSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (658)
Q Consensus 354 ~l~~~~~~f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 429 (658)
||..+.-..+++||.|-||.||+|+++- ...||+|.++... .+..+.+|..|+.||.+++||||+++.|+...
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy---tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK 701 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc---cHHHHhhhhhhhhhcccCCCCcEEEEEEEEec
Confidence 3444444445899999999999999862 3578888886443 44567789999999999999999999999998
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 430 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
..+ .+||.|||++|+|..+|+.+.+ .+++.+...++++||.||+||-+. ++|||||..+|||++.+..+|++||
T Consensus 702 s~P--vMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 702 SKP--VMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred Cce--eEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccc
Confidence 884 5999999999999999998775 499999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 510 DSWKTILARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 510 Gla~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
|+++.+.+..+.. ....|..+.+|.|||.+...++|.++|||||||||||.++ |.+||.+.... +.
T Consensus 776 GLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ------------dV 843 (996)
T KOG0196|consen 776 GLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ------------DV 843 (996)
T ss_pred cceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH------------HH
Confidence 9999876554322 2333455778999999999999999999999999999887 99998653321 11
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhh
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVE 643 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 643 (658)
+..+.+.-..+-|.+++..+.+||..||++|-.+||.+.||+..|++++..+.+.+
T Consensus 844 IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk 899 (996)
T KOG0196|consen 844 IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLK 899 (996)
T ss_pred HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhc
Confidence 22222222224566788899999999999999999999999999999987766543
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-44 Score=354.67 Aligned_cols=261 Identities=19% Similarity=0.217 Sum_probs=203.5
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~l 437 (658)
+...++||.|+||.||+|+.. .+..||||+++.+...+.+. .=.||+..|++++ |||||++.+++.+.+. ..++
T Consensus 12 Y~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~---~nLREvksL~kln~hpniikL~Evi~d~~~-~L~f 87 (538)
T KOG0661|consen 12 YTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC---MNLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILYF 87 (538)
T ss_pred HHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH---HHHHHHHHHHhcCCCCcchhhHHHhhccCc-eEee
Confidence 334478999999999999965 67889999997776554332 2368999999998 9999999999988775 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|||||+. +|+++++.+ +..+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.+..
T Consensus 88 VfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc
Confidence 9999966 999999977 55899999999999999999999999 999999999999999888999999999998754
Q ss_pred cCCCCCCcccccCccccCCcccc-cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCcc--------
Q 006178 518 RSEKNPGTLGSQGAICILPSSLE-ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPEV-------- 587 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~-------- 587 (658)
.... +...-+.+|+|||++. .+.|+.+.||||+|||++|+.+-++-|.+..+.. .--+...+..+..
T Consensus 163 kpPY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 163 KPPY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred CCCc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 3332 2233456789999976 4679999999999999999999999997654211 1111111111111
Q ss_pred cccccC--------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 588 MSYVVD--------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 588 ~~~~~~--------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
+...+. ..+...-+..+.++.+++.+|+++||.+|||+.|+++.-
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 000111 111112233677899999999999999999999999863
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=356.00 Aligned_cols=250 Identities=20% Similarity=0.327 Sum_probs=206.4
Q ss_pred ccccHHHHHHHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE
Q 006178 348 VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (658)
Q Consensus 348 ~~~~~~~l~~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 427 (658)
.++.|++|... +-||+|+.|.||+|++++ +.|||||+... -..+|+-|++|+||||+.+.|+|
T Consensus 119 WeiPFe~IsEL-----eWlGSGaQGAVF~Grl~n-etVAVKKV~el-----------kETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 119 WEIPFEEISEL-----EWLGSGAQGAVFLGRLHN-ETVAVKKVREL-----------KETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred ccCCHHHhhhh-----hhhccCcccceeeeeccC-ceehhHHHhhh-----------hhhhHHHHHhccCcceeeEeeee
Confidence 34566666543 469999999999999976 78999998321 13578899999999999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
.... ..|||||||+.|-|+++|+.+. .++......|..+||.|+.|||.+ .|||||||.-||||..+..+||+
T Consensus 182 tqsP--cyCIiMEfCa~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIs 254 (904)
T KOG4721|consen 182 TQSP--CYCIIMEFCAQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKIS 254 (904)
T ss_pred cCCc--eeEEeeeccccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEec
Confidence 9877 7799999999999999998654 488999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
|||.++....... .. ...++..|||||++...+.++|+||||||||||||+||..||.+-+.. .+
T Consensus 255 DFGTS~e~~~~ST-kM--SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss------------AI 319 (904)
T KOG4721|consen 255 DFGTSKELSDKST-KM--SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS------------AI 319 (904)
T ss_pred cccchHhhhhhhh-hh--hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh------------ee
Confidence 9999987754422 22 223456799999999999999999999999999999999999643221 22
Q ss_pred cccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 588 MSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 588 ~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
+..+-...+. ..|..+++-+.-|++.||+..|..||++++|+..|+-..
T Consensus 320 IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 320 IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 2222222222 356778888999999999999999999999999998543
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=389.32 Aligned_cols=261 Identities=21% Similarity=0.305 Sum_probs=214.4
Q ss_pred HhhhcccccCCCCeeEEEEEecC--CC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMKG--GP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~~--~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 432 (658)
.-.+.+.||+|.||.||+|.+.+ +. .||+|++... .+.....+|.+|..+|++++|||||+++|+|.+..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~---~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL---SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc---CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC-
Confidence 33456899999999999999763 33 3777776433 23456778999999999999999999999999977
Q ss_pred CceEEEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
..+|++|||++|||..+|++.+ ...++..+.+.++.|||+|+.||+++ ++|||||..+|+||++...+||+
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 4599999999999999998652 34689999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCc
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
|||+|+.+.....+.....+..+..|||||.+..+.++.|+|||||||++||++| |..||.......+.
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~---------- 914 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL---------- 914 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH----------
Confidence 9999997665544444444455678999999999999999999999999999999 89999654322111
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..+......+.|..+++.+.++|..||+.+|++||++..|++++..+....
T Consensus 915 --~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 915 --LDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --HHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 111111122356678888999999999999999999999999998877543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=360.89 Aligned_cols=260 Identities=20% Similarity=0.283 Sum_probs=199.7
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
..+.+.||+|+||.||+|.+. ++..||+|++.... .....+.+.+|+.++.++ +||||+++++++...+.
T Consensus 9 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 9 LRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA---TASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred ceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc---chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 345588999999999999742 34678998875322 122345789999999999 89999999999876542
Q ss_pred CceEEEEEecCCCChhhhhccCC---------------------------------------------------------
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------------------------------------------------- 455 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------------------------------------------------- 455 (658)
..++||||+++|+|.+++....
T Consensus 86 -~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 86 -PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred -ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4789999999999999986431
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCcc
Q 006178 456 ---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI 532 (658)
Q Consensus 456 ---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~ 532 (658)
...+++.++..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++.+..............+..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 12478899999999999999999999 999999999999999999999999999986532221111111223456
Q ss_pred ccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHH
Q 006178 533 CILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVV 611 (658)
Q Consensus 533 ~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 611 (658)
|+|||++.+..++.++|||||||++|||+| |..||....... ......... . ....+...+..+.+++
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~-~---------~~~~~~~~~~~l~~li 310 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKDG-T---------RMRAPENATPEIYRIM 310 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhcC-C---------CCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999997 999997543221 111111110 0 0111223446688999
Q ss_pred HHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 612 NLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 612 ~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+||+.||++|||+.|+++.|+++..
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=353.25 Aligned_cols=250 Identities=21% Similarity=0.257 Sum_probs=203.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.|.+.||+|+|++||+|+.. .++++|||++.++. ...+...+...+|-.+|.+| .||.|+++|-.|.+.. ..|+|
T Consensus 76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--sLYFv 152 (604)
T KOG0592|consen 76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRY-IIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--SLYFV 152 (604)
T ss_pred chhheeccccceeEEEeeecCCCceeeHhhhhHHH-HHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc--ceEEE
Confidence 36789999999999999976 57788888775433 22334456788999999999 8999999999999988 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
+||+++|+|.++|++.+. +++...+.++.+|+.||+|||++ |||||||||+|||+|+||++||.|||.|+.+...
T Consensus 153 Le~A~nGdll~~i~K~Gs--fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYGS--FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEecCCCcHHHHHHHhCc--chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 999999999999997654 99999999999999999999999 9999999999999999999999999999988643
Q ss_pred CCC---------CCC--cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 519 SEK---------NPG--TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 519 ~~~---------~~~--~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
... ... ....++..|.+||.+..+..++.+|+|+||||+|+|+.|++||....+.+. .+..+....
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli--FqkI~~l~y- 304 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI--FQKIQALDY- 304 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH--HHHHHHhcc-
Confidence 222 111 224467789999999999999999999999999999999999976543211 111111111
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+++..++.+.+|+.+.|..||.+|+|.+||-++
T Consensus 305 ----------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 305 ----------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ----------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 2333444678899999999999999999777654
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=318.84 Aligned_cols=257 Identities=16% Similarity=0.189 Sum_probs=202.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.++||+|.||.||+|++. .|+.||+||+...... +.......+|++.|+.++|+||+.++++|...+ ...||+||
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k--dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~--~l~lVfEf 82 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK--DGINRTALREIKLLQELKHPNIIELIDVFPHKS--NLSLVFEF 82 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc--cCccHHHHHHHHHHHHccCcchhhhhhhccCCC--ceEEEEEe
Confidence 368999999999999975 6889999999776422 223346789999999999999999999999888 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|+. ||+.+++.+.. .++..++..++.++++|++|+|++ .|+||||||.|+|++++|.+||+|||+|+.+......
T Consensus 83 m~t-dLe~vIkd~~i-~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 83 MPT-DLEVVIKDKNI-ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred ccc-cHHHHhccccc-ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 976 99999986554 799999999999999999999999 9999999999999999999999999999988654433
Q ss_pred CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH--HhhcCC--ccccc------
Q 006178 522 NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK--DYLELP--EVMSY------ 590 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~--~~~~~~--~~~~~------ 590 (658)
... ...+.+|+|||.+.+ ..|+...||||.|||+.||+-|.+-|.++. ++.+... +.+..+ +...+
T Consensus 158 ~~~--~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s-DidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 158 QTH--QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS-DIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred ccc--ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc-hHHHHHHHHHHcCCCCcccCcccccccc
Confidence 332 245678999999887 569999999999999999999987776543 3333222 111111 11111
Q ss_pred ------ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 ------VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.-.+.+....+.+.....+|+.+|+..||.+|+|+.|++++
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 01111112223345667899999999999999999999875
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-42 Score=338.55 Aligned_cols=261 Identities=18% Similarity=0.239 Sum_probs=205.0
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+++.++||.|..++||+|+.. .+..||||++...... ...+.+++|+..++.++||||++++..|..+. ..|+|
T Consensus 28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~---~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--~LWvV 102 (516)
T KOG0582|consen 28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN---NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS--ELWVV 102 (516)
T ss_pred eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh---hhHHHHHHHHHHhhhcCCCCcceEEEEEEecc--eeEEe
Confidence 445689999999999999964 5688999988654422 22567999999999999999999999999888 89999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|.||.+||+.++++..-...+++..+..|.+++++||.|||++ |.||||||+.||||+++|.+||+|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999999876666799999999999999999999999 9999999999999999999999999987766543
Q ss_pred CCCCCC--cccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 519 SEKNPG--TLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 519 ~~~~~~--~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
...... ....+++.|||||++.. ..|+.|+|||||||+..||.+|..||.....-.+-...-.-..+.......+.
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK 259 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence 322111 22356788999999543 46999999999999999999999999765543222222111111111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+........+.+++..||++||++|||++++++.
T Consensus 260 ---d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 260 ---DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ---HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1122334578999999999999999999999864
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=351.27 Aligned_cols=244 Identities=20% Similarity=0.285 Sum_probs=203.7
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
.+||+|+.|.||.|+.. +++.||+|++...... .++-+.+|+.+|+..+|+|||++++.|...+ +.|+|||||
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~----~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d--eLWVVMEym 352 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP----KKELLLNEILVMRDLHHPNIVNFLDSYLVGD--ELWVVMEYM 352 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCC----chhhhHHHHHHHHhccchHHHHHHHHhcccc--eeEEEEeec
Confidence 67999999999999864 6788999998665433 2345789999999999999999999888777 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++|+|.|.+... .+++.++..|++++++||+|||.+ +|+|||||.+|||++.++.+||+|||++..+......
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K- 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK- 425 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCc-
Confidence 999999999754 489999999999999999999999 9999999999999999999999999999887654432
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
...-.+++.|||||++....|++|.||||||++++||+-|++||-.+..-...|....- -.+.++ .++.
T Consensus 426 -R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n---------g~P~lk-~~~k 494 (550)
T KOG0578|consen 426 -RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---------GTPKLK-NPEK 494 (550)
T ss_pred -cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc---------CCCCcC-Cccc
Confidence 33345678899999999999999999999999999999999999754433222222111 112222 3455
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+..+.+++.+||+.||++|+++.|++++
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 66789999999999999999999999976
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=350.22 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=199.2
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||+||.|.+. .+..||+|.+..+... ......+.+.+|+.++++++ ||||+++++++.... ..+
T Consensus 19 y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~--~~~ 96 (370)
T KOG0583|consen 19 YELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT--KIY 96 (370)
T ss_pred eeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC--eEE
Confidence 344588999999999999875 5789999955332111 11234556779999999998 999999999999888 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTI 515 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~ 515 (658)
+||||+.+|+|.+++...+ .+.+.+...++.|++.|++|+|++ +|+||||||+|||+|.+ +++||+|||++...
T Consensus 97 ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred EEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 9999999999999998743 589999999999999999999999 99999999999999999 99999999999876
Q ss_pred hhcCCCCCCcccccCccccCCcccccCC-CC-ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARH-LD-VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~-~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
. ..........+++.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.. ............-.
T Consensus 172 ~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--~~~l~~ki~~~~~~------ 241 (370)
T KOG0583|consen 172 P--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--VPNLYRKIRKGEFK------ 241 (370)
T ss_pred C--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--HHHHHHHHhcCCcc------
Confidence 3 1222333445678899999999977 86 79999999999999999999997632 22222222222111
Q ss_pred CcCCCCCHHH-HHHHHHHHHHccCCCCCCCCCHHHHH
Q 006178 594 PELKHFSYDD-LKVICEVVNLCVNPDITKRPSMQELC 629 (658)
Q Consensus 594 ~~~~~~~~~~-~~~~~~li~~cl~~dP~~RPs~~evl 629 (658)
++... +.++.+|+.+|+..||.+|+|+.||+
T Consensus 242 -----~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 242 -----IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred -----CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 12222 56688999999999999999999999
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=358.44 Aligned_cols=259 Identities=21% Similarity=0.280 Sum_probs=207.5
Q ss_pred hhhcccccCCCCeeEEEEEecCC----Ce-EEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGG----PE-IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~----~~-vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
-.+.++||+|+||.||+|++..+ .. ||+|..... ........++|.+|+++|++++|||||++||++....|.
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~-~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl- 236 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS-SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL- 236 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeeccc-ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc-
Confidence 33458999999999999997632 22 677776432 223345567899999999999999999999999998864
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
++|||+|+||+|.++|++.+. .++..++.+++.|+|.||+|||++ +++||||-.+|+|++.++.+||+|||+++.
T Consensus 237 -~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 237 -MLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred -EEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999997664 699999999999999999999999 999999999999999999999999999875
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHH-HHhhcCCcccccc
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWA-KDYLELPEVMSYV 591 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~-~~~~~~~~~~~~~ 591 (658)
-. ...........+..|+|||.+....|++++|||||||++||+++ |..||.+.... ...++ ...+
T Consensus 312 ~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~--------- 380 (474)
T KOG0194|consen 312 GS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY--------- 380 (474)
T ss_pred Cc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc---------
Confidence 32 11111112235678999999999999999999999999999999 88899764422 22222 1111
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
....+...+..+..++.+||..+|++||+|.++.+.++.+.....
T Consensus 381 ----r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 381 ----RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ----cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 112233456678889999999999999999999999998876544
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=343.94 Aligned_cols=266 Identities=20% Similarity=0.268 Sum_probs=206.5
Q ss_pred ccccccHHHHHHHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceee
Q 006178 346 DVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425 (658)
Q Consensus 346 ~~~~~~~~~l~~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~ 425 (658)
+++.++.+|++..+ ...||+|++|.||+|.+ +|+.||+|++..... ......+.|.+|+.++++++||||++++|
T Consensus 11 ~~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 11 DIKCIESDDIDKYT---SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred cceecCHHHcCCCC---CeEEeeCCceEEEEEEE-CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 45556677774322 25799999999999998 578999998854322 12223467889999999999999999999
Q ss_pred EEec--CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 426 YCRE--SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 426 ~~~~--~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
++.+ .+....++||||+++|+|.+++.... .+++..+.+++.|++.||+|||+.. +++||||||+||++++++.
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYK 161 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCc
Confidence 9876 33336799999999999999998654 5899999999999999999999732 7889999999999999999
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 581 (658)
+||+|||+++.+.... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .+.....
T Consensus 162 ~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i 234 (283)
T PHA02988 162 LKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLI 234 (283)
T ss_pred EEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHH
Confidence 9999999988653221 12234567999999976 6899999999999999999999999975432 1221211
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
..... .+ ..+...+..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 235 ~~~~~------~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 235 INKNN------SL---KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HhcCC------CC---CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 11100 00 122234567899999999999999999999999998754
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=341.63 Aligned_cols=244 Identities=19% Similarity=0.251 Sum_probs=201.6
Q ss_pred cccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||||+.+.+ +.||+|.+.+..+ .+...+.+.+|++|+++++|||||.++++|+... +.++|.||
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~--~~~vVte~ 82 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSLKHPNIVEMLESFETSA--HLWVVTEY 82 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc--eEEEEehh
Confidence 37899999999999998754 5566666543322 2344567999999999999999999999999988 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.+ +|..++...+. ++++.+..|+.|++.||.|||+. +|+|||+||.|||++..+.+|+||||+|+.+....
T Consensus 83 a~g-~L~~il~~d~~--lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t-- 154 (808)
T KOG0597|consen 83 AVG-DLFTILEQDGK--LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT-- 154 (808)
T ss_pred hhh-hHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCc--
Confidence 966 99999987665 99999999999999999999999 99999999999999999999999999999875432
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
..-+...+++.|||||.+.++.|+..+|.||+||++||+++|++||... .+.+.++....++. ..+.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--si~~Lv~~I~~d~v-----------~~p~ 221 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--SITQLVKSILKDPV-----------KPPS 221 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--HHHHHHHHHhcCCC-----------CCcc
Confidence 2233345678899999999999999999999999999999999999643 23333333332211 1234
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+.+++...+.+||.+|.|..+++..
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 666778999999999999999999998754
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=336.77 Aligned_cols=255 Identities=20% Similarity=0.310 Sum_probs=198.9
Q ss_pred HhhhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
...+.+.||+|+||.||+|.+. .+..+|+|.+.... .....+.+.+|+.++++++||||+++++++...+ .
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~ 80 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC---SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN--T 80 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC--C
Confidence 3445689999999999999864 34578888774332 1233457899999999999999999999998877 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+|++|||.+..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 899999999999999997543 3589999999999999999999999 999999999999999999999999997654
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
..... ......+..+..|+|||.+.+..++.++|||||||++||+++ |+.||...... .........
T Consensus 157 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~--------- 224 (266)
T cd05064 157 DKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVEDG--------- 224 (266)
T ss_pred ccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCC---------
Confidence 32111 111112233456999999999999999999999999999775 99999654321 111111110
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.....+...+..+.+++.+||+.+|++||++.||.+.|.++
T Consensus 225 -~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 -FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00112334456788999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=341.72 Aligned_cols=261 Identities=20% Similarity=0.263 Sum_probs=195.7
Q ss_pred hhhcccccCCCCeeEEEEEecC-----------------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-----------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGK 422 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-----------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~ 422 (658)
+.+.+.||+|+||.||+|.+++ +..||+|.+.... ......+|.+|++++.+++||||++
T Consensus 7 ~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 7 LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA---NKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred CeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3456889999999999998643 2358888764322 2234567999999999999999999
Q ss_pred eeeEEecCCCCceEEEEEecCCCChhhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 006178 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----------------RCQVSWTRRMKIVIGIARGLKYLHTELGPP 485 (658)
Q Consensus 423 l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ 485 (658)
+++++.+.+ ..++||||+++|+|.+++.... ...+++..+.+++.||+.||+|||+. +
T Consensus 84 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ 158 (304)
T cd05096 84 LLGVCVDED--PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---N 158 (304)
T ss_pred EEEEEecCC--ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---C
Confidence 999998877 6799999999999999986421 12478899999999999999999999 9
Q ss_pred eeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh--C
Q 006178 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--G 563 (658)
Q Consensus 486 ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt--G 563 (658)
|+||||||+|||+++++.+||+|||+++.+..............+..|+|||++..+.++.++||||||+++|||++ +
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 99999999999999999999999999876532221111111122456999999998899999999999999999997 5
Q ss_pred CCCCCCCCC-cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 564 RPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 564 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
..||..... ............... ... ...+..++..+.+++.+||+.||++|||+.||.+.|++
T Consensus 239 ~~p~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 239 EQPYGELTDEQVIENAGEFFRDQGR--QVY----LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCcCCHHHHHHHHHHHhhhccc--ccc----ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 567754321 222222211111000 000 01122344678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=351.21 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=197.2
Q ss_pred hhhcccccCCCCeeEEEEEe------cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
..+.+.||+|+||.||+|+. .++..||+|++..... ....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~- 112 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH---LTEREALMSELKVLSYLGNHINIVNLLGACTVGG- 112 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC---cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC-
Confidence 34568999999999999974 2355788888743221 22345788999999999 8999999999998887
Q ss_pred CceEEEEEecCCCChhhhhccCC---------------------------------------------------------
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------------------------------------------------- 455 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------------------------------------------------- 455 (658)
..++||||+++|+|.++++...
T Consensus 113 -~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 113 -PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred -cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 6799999999999999986421
Q ss_pred ----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 456 ----------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 456 ----------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
...+++..+.+++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 12478999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc--HHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN--LVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
..........+..|+|||.+.+..++.++|||||||++|||+| |..||...... ...+...... +
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------~-- 336 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR----------M-- 336 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc----------C--
Confidence 1111111122346999999999999999999999999999998 88998654321 1111111100 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
..+...+.++.+++.+||+.||++||++.||++.|++.
T Consensus 337 -~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 -LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 01112245688999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=339.97 Aligned_cols=250 Identities=26% Similarity=0.364 Sum_probs=191.4
Q ss_pred cccccCCCCeeEEEEEec-----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.||.|.||.||+|.+. .+..|+||.+.. .......+.|.+|++.+++++||||++++|++...+ ..++
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~---~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~--~~~l 78 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP---SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE--PLFL 78 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST---TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS--SEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc---ccccccceeeeecccccccccccccccccccccccc--cccc
Confidence 478999999999999987 245788887732 122334678999999999999999999999999666 5799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.......+++..+..|+.||++||+|||++ +++|+||+++||++++++.+||+|||++.....
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999999999977555799999999999999999999999 999999999999999999999999999876522
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
...............|+|||.+....++.++||||||+++|||+| |+.||.... ...+....... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~--~~~~~~~~~~~-~~--------- 223 (259)
T PF07714_consen 156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD--NEEIIEKLKQG-QR--------- 223 (259)
T ss_dssp SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC--HHHHHHHHHTT-EE---------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccc-cc---------
Confidence 211111222334567999999999999999999999999999999 788886542 22222222111 11
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
...+...+..+.+++.+||+.||++|||+.++++.|
T Consensus 224 ~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112223456688999999999999999999999986
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=345.40 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=201.9
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+.|.|-.|++. +|+..|||.+...... .......+.+|+-+|+-+.||||+++|+++++.. +.|+|.||
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~-s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~--~lylvlEy 93 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL-SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ--HLYLVLEY 93 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeecccccc-ccccccchhhhhHHHHHhcCCCeeeeeeeeccCc--eEEEEEEe
Confidence 467999999999999986 6778888877655322 2223446889999999999999999999999988 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|.|++++..++. +++.+..+++.||+.|+.|+|.. +|+|||+||+|+|||..+++||+|||+|..-.. .
T Consensus 94 v~gGELFdylv~kG~--l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~---g 165 (786)
T KOG0588|consen 94 VPGGELFDYLVRKGP--LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP---G 165 (786)
T ss_pred cCCchhHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC---C
Confidence 999999999987664 99999999999999999999999 999999999999999999999999999875322 1
Q ss_pred CCCcccccCccccCCcccccCCCC-ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLD-VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~-~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
..-...++.+.|.+||++.+.+|+ .++||||.|||||.|+||+.||+++ ++...........- +.|
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd--Nir~LLlKV~~G~f-----------~MP 232 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD--NIRVLLLKVQRGVF-----------EMP 232 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc--cHHHHHHHHHcCcc-----------cCC
Confidence 122234566789999999999985 7999999999999999999999743 44433332222211 234
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
...+.++.+|+.+|+..||++|.|++||+++-
T Consensus 233 s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 233 SNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred CcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 45556788999999999999999999999874
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=350.66 Aligned_cols=258 Identities=19% Similarity=0.281 Sum_probs=197.2
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
..+.+.||+|+||.||+|+.. ++..||+|++..... ....+.+.+|+++++.+ +|+|||++++++.+.+
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~- 115 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH---TDEREALMSELKILSHLGQHKNIVNLLGACTHGG- 115 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC---HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC-
Confidence 345589999999999999842 234788888753321 12345688999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCC---------------------------------------------------------
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------------------------------------------------- 455 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------------------------------------------------- 455 (658)
..++||||+++|+|.+++....
T Consensus 116 -~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 116 -PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred -CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 6799999999999999885321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 456 -----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 456 -----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
..++++.++.+|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+.........
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 12478899999999999999999999 9999999999999999999999999998765322211111
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHH
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDD 603 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (658)
.....+..|+|||++.+..++.++|||||||++|||++ |+.||........ .... .... ..+ ..+...
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~-~~~~------~~~---~~~~~~ 340 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKM-VKRG------YQM---SRPDFA 340 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHH-HHcc------cCc---cCCCCC
Confidence 11112346999999998999999999999999999998 9999965432211 1111 1100 000 011122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 604 LKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 604 ~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
+.++.+++.+||+.||++|||+.||++.|+++.
T Consensus 341 ~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 341 PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 466889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=328.29 Aligned_cols=259 Identities=20% Similarity=0.256 Sum_probs=197.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---ceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~~~lv~ 439 (658)
+++|+|+||.||+|... .++.||||++...... -.+|+++|++++|||||++.-+|...... +..+||
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCCc--------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 78999999999999976 4589999998655432 23699999999999999999988654332 567899
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~ 516 (658)
|||+. +|+++++.. .+..++...++-+..||.+||+|||+. +|+||||||+|+|+|.+ |.+||||||.|+.+.
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 99987 999999842 233588889999999999999999998 99999999999999976 899999999999875
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCc-------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPE------- 586 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~------- 586 (658)
..... .....+..|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+++. .++..++. +..+.
T Consensus 178 ~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~-lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 178 KGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKV-LGTPTREDIKSM 253 (364)
T ss_pred cCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHH-hCCCCHHHHhhc
Confidence 44332 22334567999999987 4699999999999999999999999987542 22322222 11110
Q ss_pred --ccccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhccCC
Q 006178 587 --VMSYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRIDT 638 (658)
Q Consensus 587 --~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~ 638 (658)
...+...+.++. +....+.+..+|+.++++++|.+|.++.|++.. .+++++.
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 000111122211 223455778899999999999999999998854 4444443
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=336.22 Aligned_cols=253 Identities=22% Similarity=0.350 Sum_probs=199.1
Q ss_pred hcccccCCCCeeEEEEEecCC------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|..... ..+++|.+.... ......+|.+|++++++++||||+++++++.... ..
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~ 83 (283)
T cd05048 9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--PT 83 (283)
T ss_pred hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC--ce
Confidence 458899999999999987532 467787764322 2234567899999999999999999999998776 67
Q ss_pred EEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC
Q 006178 436 MLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 501 (658)
+++|||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC
Confidence 999999999999999975321 3588999999999999999999999 99999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKD 580 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~ 580 (658)
+.+||+|||+++................+..|+|||.+.+..++.++|||||||++|||+| |..||...... +....
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~ 238 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEM 238 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 9999999999876432221111222233466999999998899999999999999999998 99998654321 11111
Q ss_pred hhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 581 YLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
. ........+...+.++.+|+.+||+.||.+||++.||+++|+.
T Consensus 239 i----------~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 I----------RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred H----------HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1 1111112334556789999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=314.39 Aligned_cols=259 Identities=17% Similarity=0.149 Sum_probs=198.6
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.|++|+||.||+|+++ ++..||.|+++..... .+. .-.-.+|+.+|.+++|||||.+..+....+...+|||||||
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek-~GF-PItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~ 159 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK-EGF-PITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYV 159 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeeccccccc-CCC-cchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHH
Confidence 68999999999999987 4677888988654321 111 12357999999999999999999998876666799999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
+. ||..++...+ .++...++..++.|+++|++|||++ .|+||||||+|+|+.+.|.+||+|||+|+.+.......
T Consensus 160 Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~ 234 (419)
T KOG0663|consen 160 EH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPY 234 (419)
T ss_pred Hh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCCcccC
Confidence 87 9999998665 4699999999999999999999999 99999999999999999999999999999886543322
Q ss_pred CCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcC-CcccccccC-C----
Q 006178 523 PGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLEL-PEVMSYVVD-P---- 594 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~-~---- 594 (658)
+....+.+|+|||.+.+. .|+++.|+||+|||+.||+++++-|.+... +....+...+.. .+.+...++ .
T Consensus 235 --T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k 312 (419)
T KOG0663|consen 235 --TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK 312 (419)
T ss_pred --cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhh
Confidence 333456789999999874 599999999999999999999999876542 111111111111 111111110 0
Q ss_pred --cCC---------CCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 --ELK---------HFSYD-DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 --~~~---------~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... .+... ..+.-.+|+...+..||.+|.|++|.++.
T Consensus 313 ~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 313 KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 000 11111 34677899999999999999999998864
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=338.03 Aligned_cols=268 Identities=21% Similarity=0.275 Sum_probs=215.6
Q ss_pred HHHHHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC
Q 006178 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (658)
Q Consensus 354 ~l~~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 433 (658)
|+-+..--|.++||+|-||.|..+....+..||||++.... ..+.+.+|.+|+++|.+++|||||+++|+|..+++
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a---~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP- 609 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA---TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP- 609 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc---chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc-
Confidence 33333334568999999999999999888999999985433 34556889999999999999999999999999985
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
.++|+|||++|+|.+++..+....+.-....+|+.|||.||+||.+. ++||||+.+.|+|+|.++++||+|||+++
T Consensus 610 -icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 610 -LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred -hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccc
Confidence 49999999999999999877554445566778999999999999998 99999999999999999999999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh--CCCCCCCCC-CcHHHHHHHhhcCCccccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPCCKDK-GNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt--G~~p~~~~~-~~~~~~~~~~~~~~~~~~~ 590 (658)
.+..............+.+|||||.+..+++++++|||+|||++||+++ ...||.... +..++-...+...+...
T Consensus 686 ~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~-- 763 (807)
T KOG1094|consen 686 NLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ-- 763 (807)
T ss_pred ccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc--
Confidence 7654443333333445678999999999999999999999999999987 678986432 23333333333322211
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.....|.-++..+.+++.+||..|-++||+++++...|++.
T Consensus 764 ----~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 764 ----VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ----eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11234556677889999999999999999999999998864
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=329.90 Aligned_cols=253 Identities=19% Similarity=0.245 Sum_probs=201.6
Q ss_pred HHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 358 ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 358 ~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
....+.+.||+|+||.||+|...+++.+|+|.+..... ..+++.+|++++++++||||+++++++...+ ..++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 78 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE--PIYI 78 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-----cHHHHHHHHHHHHHCCCCCccceeEEEecCC--Ceee
Confidence 34455689999999999999988888899988743321 2456889999999999999999999998877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++++|.+++.......+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 99999999999999765544689999999999999999999999 999999999999999999999999999887642
Q ss_pred cCCCCCCcccc-cCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKNPGTLGS-QGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~~~~~~~-~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
... ....+. ....|+|||+..+..++.++||||||+++|||+| |+.||...... ......... ..
T Consensus 156 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~-~~-------- 222 (261)
T cd05068 156 DIY--EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQG-YR-------- 222 (261)
T ss_pred Ccc--cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcC-CC--------
Confidence 211 111111 1346899999998899999999999999999999 99998654321 111111110 00
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
...+...+..+.+++.+|++.+|++||++.++.+.|++
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 -MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 01122344678899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=335.40 Aligned_cols=250 Identities=14% Similarity=0.115 Sum_probs=195.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|... +++.+|+|.+...... .......+.+|+.++++++|+||+++++++.+.+ ..++||||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~--~~~lv~e~ 81 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD--ALCLVLTI 81 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--eEEEEEEe
Confidence 478999999999999975 6788999987543321 1223346789999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++........
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET- 157 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe-
Confidence 9999999888654444689999999999999999999999 999999999999999999999999999876432111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||++.+..++.++|||||||++|||++|+.||....... ..-....... ....++
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~----------~~~~~~ 225 (285)
T cd05631 158 --VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE----------DQEEYS 225 (285)
T ss_pred --ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc----------ccccCC
Confidence 112234567999999999999999999999999999999999997543321 1111111100 001122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
...+..+.+|+.+||+.||++||+ ++|+++.
T Consensus 226 ~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 226 EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 334467889999999999999997 7777753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=328.95 Aligned_cols=249 Identities=18% Similarity=0.269 Sum_probs=196.4
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||++..+++..+|+|.+..... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~iv~e 79 (256)
T cd05114 7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK--PLYIVTE 79 (256)
T ss_pred EEeeEecCCcCceEEEEEeccCceEEEEecccCCc-----cHHHHHHHHHHHHHCCCCCceeEEEEEccCC--CEEEEEE
Confidence 34578999999999999998888899987643221 2356889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.++++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.++.......
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 80 FMENGCLLNYLRQRQG-KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred cCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 9999999999975433 589999999999999999999999 999999999999999999999999998876432211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
........+..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+.......... . ..
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~----~------~~ 222 (256)
T cd05114 156 -TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGFR----L------YR 222 (256)
T ss_pred -eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCC----C------CC
Confidence 11111122346999999998889999999999999999999 8999865432 111111111100 0 01
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1122356889999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=304.35 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=202.0
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|-||.||.|+.+. +..||+|.+.+ +.........++.+|++|.+.++||||+++|+||.+.. ..|+++|
T Consensus 26 igr~LgkgkFG~vYlarekks~~IvalKVlfK-sqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~--riyLilE 102 (281)
T KOG0580|consen 26 IGRPLGKGKFGNVYLAREKKSLFIVALKVLFK-SQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK--RIYLILE 102 (281)
T ss_pred ccccccCCccccEeEeeeccCCcEEEEeeeeH-HHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc--eeEEEEE
Confidence 45899999999999999875 45666666644 33444556678999999999999999999999999988 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|.++|+++..|.......+++.....+..|+|.||.|+|.. +|+||||||+|+|++..+..||+|||-+....
T Consensus 103 ya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p---- 175 (281)
T KOG0580|consen 103 YAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 175 (281)
T ss_pred ecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC----
Confidence 99999999999976666799999999999999999999999 99999999999999999999999999775432
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......-+++.-|.+||...+..++...|+|++||+.||++.|.+||.... ..+..++.... ++ .+|
T Consensus 176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~etYkrI~k~----------~~-~~p 242 (281)
T KOG0580|consen 176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HSETYKRIRKV----------DL-KFP 242 (281)
T ss_pred CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hHHHHHHHHHc----------cc-cCC
Confidence 222233455677999999999999999999999999999999999996543 11111211111 11 123
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.++|.+|+..+|.+|.+..|+++.
T Consensus 243 ~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 3445668899999999999999999998865
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-40 Score=333.24 Aligned_cols=257 Identities=20% Similarity=0.311 Sum_probs=200.6
Q ss_pred HHhhhcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC
Q 006178 358 ACEDFSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (658)
Q Consensus 358 ~~~~f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 431 (658)
.++.+.+.||+|+||.||+|+..+ +..+|+|.+.... .....+.+.+|++++++++|+||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA---SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC---CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 344556899999999999998743 3678888774322 1223568999999999999999999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~ 499 (658)
..++||||+++|+|.+++...+ ...+++.++..++.|++.|++|||++ +++||||||+||+++
T Consensus 82 --~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~ 156 (280)
T cd05049 82 --PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVG 156 (280)
T ss_pred --CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEc
Confidence 7899999999999999997432 23588999999999999999999999 999999999999999
Q ss_pred CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHH
Q 006178 500 EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWA 578 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~ 578 (658)
.++.+||+|||+++.+..............+..|+|||++.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 157 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~ 234 (280)
T cd05049 157 YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVI 234 (280)
T ss_pred CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHH
Confidence 999999999999875432221111122223456999999999999999999999999999999 99998644321 111
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.... .......+...+..+.+++.+||+.||++||++.||++.|++
T Consensus 235 ~~~~----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 235 ECIT----------QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHH----------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1111 111111222345678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=310.97 Aligned_cols=234 Identities=21% Similarity=0.239 Sum_probs=194.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||.|+||.|..++.+ +|..+|+|.+.+.. .......+...+|..+|+.+.||.++++++.+.+.+ ..+|||||
T Consensus 49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~--~lymvmey 125 (355)
T KOG0616|consen 49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-VVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS--NLYMVMEY 125 (355)
T ss_pred eeeeccCccceEEEEEEccCCceeehhhcCHHH-HHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC--eEEEEEec
Confidence 478999999999999987 56677777775433 223334457889999999999999999999999888 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
++||.|..++++.++ +++..++-+|.||+.||+|||+. +|++|||||+|||+|.+|.+||.|||+|+.+...
T Consensus 126 v~GGElFS~Lrk~~r--F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r--- 197 (355)
T KOG0616|consen 126 VPGGELFSYLRKSGR--FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR--- 197 (355)
T ss_pred cCCccHHHHHHhcCC--CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc---
Confidence 999999999987665 99999999999999999999999 9999999999999999999999999999986432
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
...-++++.|+|||.+....|+.++|.|||||++|||+.|.+||..... .... ..++...++ +|.
T Consensus 198 --T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~iY----------~KI~~~~v~-fP~ 262 (355)
T KOG0616|consen 198 --TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQIY----------EKILEGKVK-FPS 262 (355)
T ss_pred --EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HHHH----------HHHHhCccc-CCc
Confidence 2334567889999999999999999999999999999999999976543 1111 222222222 444
Q ss_pred HHHHHHHHHHHHccCCCCCCC
Q 006178 602 DDLKVICEVVNLCVNPDITKR 622 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~R 622 (658)
.....+.+|+.+.++.|-.+|
T Consensus 263 ~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 263 YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ccCHHHHHHHHHHHhhhhHhh
Confidence 555667899999999999988
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=336.38 Aligned_cols=260 Identities=21% Similarity=0.305 Sum_probs=216.5
Q ss_pred HHHHHhhhcccccCCCCeeEEEEEecC---CC--eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEec
Q 006178 355 LEVACEDFSNIIGSSPDSLVYKGTMKG---GP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (658)
Q Consensus 355 l~~~~~~f~~~lG~G~~g~Vy~~~~~~---~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 429 (658)
+.+..-...++||.|.||.||+|.+.+ |. -||||..+... .....+.|..|..+|++++|||||+++|+|.+
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~---t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC---TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC---ChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 333333445899999999999999753 33 35555543222 22346789999999999999999999999987
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 430 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
.. .+||||.++-|.|..|++.+.. .++......++.||+.||+|||+. .+|||||..+|||+.....+||+||
T Consensus 463 ~P---~WivmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 463 QP---MWIVMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred cc---eeEEEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 64 5999999999999999986654 699999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
|+++.+.+... .....+..+..|||||.+.-.+++.++|||-|||.+||++. |..||.+-.. .+.+
T Consensus 536 GLSR~~ed~~y-YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN------------sDVI 602 (974)
T KOG4257|consen 536 GLSRYLEDDAY-YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN------------SDVI 602 (974)
T ss_pred chhhhccccch-hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc------------cceE
Confidence 99998765443 33345666788999999999999999999999999999987 9999964321 2344
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
..+-..+..+.|+.++..+..|+.+||++||.+||.+.|+...|.++..
T Consensus 603 ~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 4555566667888999999999999999999999999999999998876
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=341.52 Aligned_cols=245 Identities=18% Similarity=0.137 Sum_probs=194.3
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+++.. +++.+|+|.+...... .......+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e~~ 77 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVII-AKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD--RLCFVMEYA 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC--EEEEEEeCC
Confidence 46999999999999975 6788999987543211 2223456789999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-- 150 (323)
T cd05571 78 NGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-- 150 (323)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--
Confidence 9999999997544 589999999999999999999999 999999999999999999999999999875322111
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
......++..|+|||.+.+..++.++|||||||++|||+||+.||...... .......... ..++..
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~~~~~-----------~~~p~~ 217 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEE-----------IRFPRT 217 (323)
T ss_pred cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHHHcCC-----------CCCCCC
Confidence 111223566799999999999999999999999999999999999654321 1111111110 112233
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
.+..+.+++.+||+.||++|| ++.|+++.
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 456688999999999999999 78888753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=323.22 Aligned_cols=252 Identities=14% Similarity=0.189 Sum_probs=205.4
Q ss_pred HHHHhhhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 356 EVACEDFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 356 ~~~~~~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
.+..++|.+.||+|.||.|-+|+. ..|+.||||.+.+. ...+++..-.+++|++||+.++||||+.+|.+|+..+ .
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKd-kIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd--K 127 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKD-KIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD--K 127 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhh-hcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc--e
Confidence 345567788999999999999996 57899999987543 3334445567899999999999999999999999988 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
+.|||||..+|.|+||+...+. +++.+..++++||..|+.|+|.+ +++|||||.+|||+|+++++||+|||++-.
T Consensus 128 IvivMEYaS~GeLYDYiSer~~--LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGS--LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred EEEEEEecCCccHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhh
Confidence 8999999999999999986654 99999999999999999999999 999999999999999999999999999877
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
+.... .-...++.+.|.+||.+.+.+| ++..|-||+||+||-|+.|..||++.+. ...++....
T Consensus 203 y~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--k~lvrQIs~---------- 267 (668)
T KOG0611|consen 203 YADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--KRLVRQISR---------- 267 (668)
T ss_pred hcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--HHHHHHhhc----------
Confidence 64322 1223445678889999999988 4899999999999999999999976432 222222111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
...+ .++.+....-||++||..+|++|.|+.+|....
T Consensus 268 GaYr--EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 268 GAYR--EPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred cccc--CCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1111 111223456899999999999999999999874
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=328.18 Aligned_cols=255 Identities=20% Similarity=0.323 Sum_probs=200.2
Q ss_pred hhcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|+... ...+|+|.+.... .......|.+|+.++++++||||+++++++.+.+ ..+
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 81 (266)
T cd05033 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR--PVM 81 (266)
T ss_pred eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC--ceE
Confidence 345899999999999999753 3467888764322 2334567899999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++++|.+++..... .+++..+.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 82 iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 82 IITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999999976443 689999999999999999999999 99999999999999999999999999998764
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..........+..+..|+|||.+.+..++.++||||||+++|||++ |..||...... ......... .
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~-~--------- 225 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDG-Y--------- 225 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcC-C---------
Confidence 2222111222233456999999998899999999999999999998 99998543321 111111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
....+...+..+.+++.+||+.+|++||++.||++.|++++
T Consensus 226 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 226 RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 00112233466889999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=328.82 Aligned_cols=251 Identities=17% Similarity=0.277 Sum_probs=199.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.++||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.++++++|+||+++++++.+.+ ..+++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 82 (261)
T cd05072 10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEE--PIYIITEY 82 (261)
T ss_pred EeeecCCcCCceEEEEEecCCceEEEEEccCCch-----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CcEEEEec
Confidence 3488999999999999988888899998643221 2457899999999999999999999998777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.++++......+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.........
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 9999999999765555689999999999999999999999 9999999999999999999999999998765322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.......+..|+|||++....++.++|||||||++|||+| |+.||....... ........ .. .+. .
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~-~~-----~~~----~ 226 (261)
T cd05072 160 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQRG-YR-----MPR----M 226 (261)
T ss_pred -ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHHcC-CC-----CCC----C
Confidence 1111122456999999998899999999999999999999 999996543211 11111110 00 011 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
...+..+.+++.+||+.+|++||+++++.+.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 12345688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=338.07 Aligned_cols=255 Identities=19% Similarity=0.244 Sum_probs=197.5
Q ss_pred cccccCCCCeeEEEEEecC-CC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.||+|+||.||+|++.. +. .||+|.+.... .....+++.+|+.+++.++||||++++|++.... .++
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~---~~~ 85 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQL 85 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC---cee
Confidence 4789999999999998653 33 37777764221 2234467889999999999999999999997653 579
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 86 v~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccC
Confidence 9999999999999986543 589999999999999999999999 999999999999999999999999999987643
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
............+..|+|||++.+..++.++|||||||++|||+| |+.||...... ++.. ........
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~-~~~~~~~~-------- 230 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS-ILEKGERL-------- 230 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHH-HHhCCCCC--------
Confidence 222111112223456999999999999999999999999999998 99998654321 1111 11111100
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..+..++..+.+++.+||+.+|++||++.+++..+..+....
T Consensus 231 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 231 -PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 111223356789999999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=351.89 Aligned_cols=258 Identities=14% Similarity=0.213 Sum_probs=208.2
Q ss_pred cccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceee-EEec---CC-CCce
Q 006178 363 SNIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLG-YCRE---SS-PFTR 435 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~-~~~~---~~-~~~~ 435 (658)
.+.|.+|||+.||.|....+ .++|+|++...+ +...+.+.+|+++|++|+ |+|||.+++ .... .+ .++.
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d----e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND----EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCC----HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 47899999999999998876 999999997653 345567899999999995 999999999 3322 12 3578
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
+|.||||++|+|-|++..+....|++.++++|+.|+++|+++||.. .|+|||||||-+||||+.++..||||||.|...
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 9999999999999999866555699999999999999999999984 778999999999999999999999999987653
Q ss_pred hhcCCCCC-------CcccccCccccCCccc---ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCC
Q 006178 516 LARSEKNP-------GTLGSQGAICILPSSL---EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 516 ~~~~~~~~-------~~~~~~~~~~~aPE~~---~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 585 (658)
........ ......++.|++||++ .+..+++|+|||++||+||-|+....||++.+.
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------------- 263 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------------- 263 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------------
Confidence 32221111 1123346789999987 467899999999999999999999999975421
Q ss_pred cccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 586 EVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 586 ~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
-.+++.... +..+..+..+.+||+.||+.||.+||++.||+..+.++......
T Consensus 264 ---laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 264 ---LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred ---eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 122333222 11246778899999999999999999999999999998876543
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=327.46 Aligned_cols=252 Identities=21% Similarity=0.265 Sum_probs=199.4
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|...+ ++.+++|.+... ....+.+.+|++++++++|+||+++++++...+ ..+++|
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 81 (263)
T cd05052 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIIT 81 (263)
T ss_pred EEeeecCCcccceEEEEEEecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCC--CcEEEE
Confidence 345889999999999999764 677888876422 122456889999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.......+++..++.++.|+++||+|||++ +++||||||+||++++++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 999999999999765555689999999999999999999999 99999999999999999999999999987654321
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
... ......+..|+|||.+.+..++.++|||||||++|||+| |..||..... .+........ ..+ .
T Consensus 159 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~-------~~~---~ 225 (263)
T cd05052 159 YTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKG-------YRM---E 225 (263)
T ss_pred eec-cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCC-------CCC---C
Confidence 111 111112345999999999999999999999999999998 9999865332 2221111110 000 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.+...+..+.+++.+||+.||++||++.|+++.|+.+
T Consensus 226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1223446788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-41 Score=330.93 Aligned_cols=244 Identities=20% Similarity=0.305 Sum_probs=198.6
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||||.+. .++.||+|.+..... ....+++.+|+.+|..++++||.++||.+..+. ..+++||||
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~---~deIediqqei~~Ls~~~~~~it~yygsyl~g~--~LwiiMey~ 93 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA---EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT--KLWIIMEYC 93 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhc---chhhHHHHHHHHHHHhcCcchHHhhhhheeecc--cHHHHHHHh
Confidence 68999999999999986 456777777754332 233467889999999999999999999998887 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
.+|++.+.++... .+.+..+.-|++++..|+.|||.+ +.+|||||+.|||+..+|.+|++|||.+..+.......
T Consensus 94 ~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred cCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 9999999998553 358888889999999999999999 99999999999999999999999999988765443333
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
....++++|||||++....|+.|+||||+|++.+||.+|.+|+.+...- +.. -.+..-..|.+ ...
T Consensus 169 --~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-----rvl----flIpk~~PP~L---~~~ 234 (467)
T KOG0201|consen 169 --KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-----RVL----FLIPKSAPPRL---DGD 234 (467)
T ss_pred --ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-----eEE----EeccCCCCCcc---ccc
Confidence 3345678999999999889999999999999999999999998643220 000 11111122222 225
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+.+++..||++||+.||++.++++.
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 56778999999999999999999999875
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=332.22 Aligned_cols=258 Identities=20% Similarity=0.300 Sum_probs=199.4
Q ss_pred hhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 361 DFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
.+.+.||+|+||.||++... ++..+|+|.+... .....+.+.+|++++++++||||+++++++...+ .
T Consensus 8 ~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~ 81 (288)
T cd05093 8 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--P 81 (288)
T ss_pred eeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--c
Confidence 34588999999999999852 2345777766322 1233557899999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 435 RMLVFDYASNGTLYEHLHYGE-----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
.++||||+++++|.+++.... ...+++..+..++.|++.||+|||++ +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 799999999999999986432 13489999999999999999999999 9999999999999999999
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhh
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYL 582 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 582 (658)
+||+|||+++................+..|+|||.+.+..++.++|||||||++|||+| |..||...... .......
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--~~~~~i~ 236 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECIT 236 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 99999999876532221111222223456999999998899999999999999999999 89998644321 1111111
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.. . ....+...+..+.+++.+||+.||.+|||+.|+++.|+++....
T Consensus 237 ~~-~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 237 QG-R---------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred cC-C---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 11 0 00111123356889999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=345.10 Aligned_cols=258 Identities=21% Similarity=0.267 Sum_probs=198.9
Q ss_pred hhcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||.||+|++.. +..||+|++.... .....+.+.+|+++++++. ||||+++++++.+.+
T Consensus 40 ~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~-- 114 (400)
T cd05105 40 VLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA---RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG-- 114 (400)
T ss_pred ehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--
Confidence 345899999999999998632 2368999874332 1233467899999999995 999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCC----------------------------------------------------------
Q 006178 434 TRMLVFDYASNGTLYEHLHYGE---------------------------------------------------------- 455 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~---------------------------------------------------------- 455 (658)
..++||||+++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 7899999999999999886421
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec
Q 006178 456 ------------------------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 456 ------------------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~ 499 (658)
...+++.++..++.|+++||+|||+. +|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 12478889999999999999999999 999999999999999
Q ss_pred CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHH
Q 006178 500 EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWA 578 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~ 578 (658)
+++.+||+|||+++.+..............+..|+|||.+.+..++.++|||||||++|||++ |..||.........+
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~- 350 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY- 350 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH-
Confidence 999999999999876543222111111223456999999998899999999999999999997 999986432211111
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
. ...... ....+...+..+.+++.+||+.||++||++.+|.+.|+++.+
T Consensus 351 ~-~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 351 N-KIKSGY---------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred H-HHhcCC---------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1 111100 011223345678899999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=323.97 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=194.7
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+|+.. +++.+|+|.+.... .......+.+|++++++++||||+++++++.... ..++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC--CeEEEEeec
Confidence 46999999999999985 67788888764221 2234467899999999999999999999998877 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++++|.+++.... ..+++.++..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++..........
T Consensus 76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 151 (252)
T cd05084 76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS 151 (252)
T ss_pred cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccc
Confidence 9999999997543 3589999999999999999999999 99999999999999999999999999987543211111
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.......+..|+|||.+.+..++.++|||||||++|||++ |..||........ ....... . ....+.
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~---~~~~~~~------~---~~~~~~ 219 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT---REAIEQG------V---RLPCPE 219 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH---HHHHHcC------C---CCCCcc
Confidence 1111122345899999998899999999999999999998 8888854322111 1111100 0 001222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
..+..+.+++.+||+.+|++|||+.|+.+.|++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 345678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=331.29 Aligned_cols=254 Identities=21% Similarity=0.324 Sum_probs=197.0
Q ss_pred hhhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
..+.+.||+|+||.||+|.. .++..+++|.+..... ......+.+|++++++++||||+++++++.... .
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~ 81 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ--P 81 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC--c
Confidence 34558899999999999985 2456788888753221 223457889999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec
Q 006178 435 RMLVFDYASNGTLYEHLHYGE---------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~ 499 (658)
.++||||+++|+|.+++.... ...+++.+...++.|++.||+|||++ +++||||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIG 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEc
Confidence 799999999999999985321 23478999999999999999999999 999999999999999
Q ss_pred CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC-cHHHH
Q 006178 500 EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG-NLVDW 577 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~-~~~~~ 577 (658)
+++.+||+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||..... ...+.
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999999876533221111122223456999999988889999999999999999999 9999865432 11111
Q ss_pred HHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.. .. . ....+...+..+.+++.+||+.||++||++.+|.++|..
T Consensus 239 ~~---~~-~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VR---KR-Q---------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH---cC-C---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11 10 1 011222334668899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=335.92 Aligned_cols=260 Identities=20% Similarity=0.256 Sum_probs=199.1
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
+.+.+.||+|+||.||+|... .++.||+|++.... .....+.+.+|++++.++ +|+||++++++|...+.
T Consensus 9 ~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 9 LKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA---TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred hhhhcccccCcCceEEeccccccccccccceeeeeeccCCC---CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 345689999999999999743 24678998874321 122345678899999999 89999999998875543
Q ss_pred CceEEEEEecCCCChhhhhccCC---------------------------------------------------------
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------------------------------------------------- 455 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------------------------------------------------- 455 (658)
..+++|||+++|+|.+++....
T Consensus 86 -~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 86 -PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred -CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5789999999999999985321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccc
Q 006178 456 --RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC 533 (658)
Q Consensus 456 --~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 533 (658)
...+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+..............+..|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 12589999999999999999999999 9999999999999999999999999999876432222212222234569
Q ss_pred cCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHH
Q 006178 534 ILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVN 612 (658)
Q Consensus 534 ~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 612 (658)
+|||++.+..++.++|||||||++|||++ |..||........ ... ....... ...+.....++.+++.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~-~~~~~~~---------~~~~~~~~~~~~~l~~ 310 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCR-RLKEGTR---------MRAPEYATPEIYSIML 310 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHH-HHhccCC---------CCCCccCCHHHHHHHH
Confidence 99999999999999999999999999998 9999965322111 111 1111000 0112233466889999
Q ss_pred HccCCCCCCCCCHHHHHHHHhhccC
Q 006178 613 LCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 613 ~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+||+.+|++||++.|+++.|+++.+
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=331.27 Aligned_cols=256 Identities=20% Similarity=0.293 Sum_probs=199.2
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|+.. ++..+++|.+... .....+.+.+|++++++++|+||+++++++...+ ..
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 82 (291)
T cd05094 9 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD--PL 82 (291)
T ss_pred EeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC--ce
Confidence 3478999999999999853 2345777765322 2233457899999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC
Q 006178 436 MLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 501 (658)
++||||+++++|.+++..+. ...+++..++.++.||+.||+|||++ +|+||||||+||+++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 99999999999999996432 13489999999999999999999999 99999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKD 580 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~ 580 (658)
+.+||+|||+++...............+...|+|||.+.+..++.++|||||||++|||+| |+.||...... .....
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~ 237 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EVIEC 237 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence 9999999999876533221111222223456999999999999999999999999999999 99998654321 11111
Q ss_pred hhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 581 YLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.. . ......+...+..+.+++.+||+.+|++||++.+|++.|+++.+.
T Consensus 238 ~~-~---------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 238 IT-Q---------GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred Hh-C---------CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11 1 011111223446688999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=335.43 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=208.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.+|+|+||.++.++++ +.+.+++|++...... ...++...+|+.++++++|||||.+++.|.+++. ..+||
T Consensus 6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t--~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~-~l~Iv 82 (426)
T KOG0589|consen 6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT--EPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ-LLCIV 82 (426)
T ss_pred hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC--chhhHHHHHHHHHHHhccCCCeeeeccchhcCCc-eEEEE
Confidence 344578999999999999876 5678899988654422 3334578899999999999999999999998872 28999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|+||+||++.+.+.+..+..++++.+..|+.|++.|+.|||++ +|+|||||+.||+++.+..+||+|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999999877767899999999999999999999998 9999999999999999999999999999987544
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......+++.||.||.+.+.+|+.|+||||+||++|||++-+++|...+. ...+.. +.......
T Consensus 160 ~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--~~Li~k----------i~~~~~~P 225 (426)
T KOG0589|consen 160 DS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--SELILK----------INRGLYSP 225 (426)
T ss_pred hh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--HHHHHH----------HhhccCCC
Confidence 32 22334456778999999999999999999999999999999999975432 222211 11112234
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+.....++..++..|+..+|+.||++.+++.+
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 455666788899999999999999999999987
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=334.94 Aligned_cols=242 Identities=18% Similarity=0.168 Sum_probs=191.4
Q ss_pred ccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||+|+||.||+|+.. +++.+|+|.+..... ........+.+|+.++++++||||+++++++.+.+ ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~ 77 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE--KLYLVLAFING 77 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC--eEEEEEcCCCC
Confidence 799999999999986 467888888753321 12233456889999999999999999999998877 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 78 g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~ 150 (312)
T cd05585 78 GELFHHLQREG--RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK--T 150 (312)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc--c
Confidence 99999997544 489999999999999999999999 9999999999999999999999999998754322211 1
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHH
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDL 604 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (658)
....++..|+|||.+.+..++.++|||||||++|||+||+.||.... ...........+. .++...+
T Consensus 151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~--~~~~~~~~~~~~~-----------~~~~~~~ 217 (312)
T cd05585 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN--VNEMYRKILQEPL-----------RFPDGFD 217 (312)
T ss_pred ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC--HHHHHHHHHcCCC-----------CCCCcCC
Confidence 22234567999999999999999999999999999999999996543 2222222222111 1223344
Q ss_pred HHHHHHHHHccCCCCCCCCC---HHHHHH
Q 006178 605 KVICEVVNLCVNPDITKRPS---MQELCT 630 (658)
Q Consensus 605 ~~~~~li~~cl~~dP~~RPs---~~evl~ 630 (658)
..+.+++.+||+.||++||+ +.|+++
T Consensus 218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 66889999999999999985 555554
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=325.28 Aligned_cols=257 Identities=19% Similarity=0.189 Sum_probs=196.7
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccc-----h-----hhHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT-----G-----YLELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~-----~-----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
+...+.||+|.||.|-+|+.. +++.||+|.+.++..... . ...+...+|+.+|++++|||||+++.+..
T Consensus 99 y~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLD 178 (576)
T KOG0585|consen 99 YELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLD 178 (576)
T ss_pred eehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeec
Confidence 334478999999999999976 678899998865542211 1 11247899999999999999999999999
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
++.....|||+|||..|.+...-... ..+++.++++|++++..||+|||.+ +||||||||+|+||+++|++||+|
T Consensus 179 DP~s~~~YlVley~s~G~v~w~p~d~--~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIsD 253 (576)
T KOG0585|consen 179 DPESDKLYLVLEYCSKGEVKWCPPDK--PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKISD 253 (576)
T ss_pred CcccCceEEEEEeccCCccccCCCCc--ccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEeec
Confidence 88777899999999988776543322 2289999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhcCCCCC---CcccccCccccCCcccccCC----CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q 006178 509 FDSWKTILARSEKNP---GTLGSQGAICILPSSLEARH----LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 509 FGla~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~----~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 581 (658)
||.+........... -....+++.++|||...++. .+.+.||||+||+||.|+.|+.||.++. ..+....
T Consensus 254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~--~~~l~~K- 330 (576)
T KOG0585|consen 254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF--ELELFDK- 330 (576)
T ss_pred cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch--HHHHHHH-
Confidence 999876533211111 11234577899999988733 3578999999999999999999996532 1111111
Q ss_pred hcCCcccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 582 LELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
++...+. +..++..+.+.+||.++|++||++|.+..+|..+.-
T Consensus 331 ---------Ivn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 331 ---------IVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred ---------HhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 1111111 112245677889999999999999999999987654
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=316.80 Aligned_cols=260 Identities=20% Similarity=0.201 Sum_probs=198.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC---CCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES---SPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~---~~~~~~lv~ 439 (658)
+.||+|+||.|.+|.+. +|..||+||+..... .....++..+|+++|++++|+||+.+++.+..+ +-...|+|+
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~--~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE--NQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhhhh--chHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 67999999999999976 678999999863322 233456788999999999999999999998652 222689999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+|+ .||.+.++.+. .++......++.|+++||+|+|+. +|+||||||+|++++.+...||+|||+|+......
T Consensus 106 elMe-tDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 106 ELME-TDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred hHHh-hHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccccC
Confidence 9994 59999998654 399999999999999999999999 99999999999999999999999999999875432
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCc--cccccc---
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPE--VMSYVV--- 592 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~--~~~~~~--- 592 (658)
....-+....+.+|+|||.+.. ..||.+.||||.|||+.||++|++-|.+.+. +....+......+. .+..+.
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 2222233445677899999765 6799999999999999999999999976442 11111222221111 000010
Q ss_pred -----C--CcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 -----D--PELKHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 -----~--~~~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. +..... -+.......+|+.+||..||.+|+|++|+++.
T Consensus 260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 111111 12344668899999999999999999999876
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=330.05 Aligned_cols=255 Identities=20% Similarity=0.307 Sum_probs=196.6
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 433 (658)
+.+.+.||+|+||.||+|.+. .+..+|+|++.... ......++.+|+.++++++||||+++++++.+..
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-- 82 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ-- 82 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--
Confidence 334589999999999999864 24568888763221 1223456889999999999999999999998777
Q ss_pred ceEEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCce
Q 006178 434 TRMLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 505 (658)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 6799999999999999986432 12468889999999999999999998 999999999999999999999
Q ss_pred eccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcC
Q 006178 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLEL 584 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 584 (658)
|+|||+++.+..............+..|+|||++.+..++.++|||||||++|||++ |..||..... ..........
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~ 237 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFVMEG 237 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcC
Confidence 999999876533222222222233456999999998899999999999999999999 7888864332 1111111111
Q ss_pred CcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 238 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 238 ----------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred ----------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111222344678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=324.62 Aligned_cols=253 Identities=18% Similarity=0.248 Sum_probs=202.6
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.+.||+|+||.||+|...++..+++|.+..... ....++.+|+.++++++|+||+++++++.+.+ ..++||
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~ 81 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL----LKQQDFQKEVQALKRLRHKHLISLFAVCSVGE--PVYIIT 81 (261)
T ss_pred HHHhhhhccCCCccEEEeEecCCCcEEEEeccccch----hhHHHHHHHHHHHhcCCCcchhheeeeEecCC--CeEEEE
Confidence 334589999999999999998888899988754322 22456889999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.......+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999999876555689999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. .........|++||......++.++||||||+++|+|++ |+.||...... +........ . ...
T Consensus 159 ~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~-~---------~~~ 224 (261)
T cd05148 159 YL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITAG-Y---------RMP 224 (261)
T ss_pred cc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHhC-C---------cCC
Confidence 11 112223456899999988899999999999999999999 89999654321 111111110 0 011
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 225 CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 2223446688999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=330.81 Aligned_cols=255 Identities=22% Similarity=0.316 Sum_probs=198.5
Q ss_pred hhhcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 433 (658)
..+.+.||+|+||.||+|+..+ +..+|+|++..... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-- 81 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE---GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ-- 81 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC--
Confidence 3445789999999999998643 46788888753321 233467889999999999999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec
Q 006178 434 TRMLVFDYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~ 499 (658)
..++++||+++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~ 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVF 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEec
Confidence 679999999999999998521 123488999999999999999999999 999999999999999
Q ss_pred CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHH
Q 006178 500 EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWA 578 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~ 578 (658)
+++.+||+|||+++................+..|+|||.+.+..++.++|||||||++|||+| |..||..... .++.
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~ 236 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVI 236 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HHHH
Confidence 999999999999876533221111111223457999999988889999999999999999998 8888864322 1222
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
...... .....+...+..+.+++.+||+.+|.+||++.||++.|+.
T Consensus 237 ~~i~~~----------~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 EMIRNR----------QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHcC----------CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 221111 1112233455678899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=325.63 Aligned_cols=257 Identities=23% Similarity=0.335 Sum_probs=199.5
Q ss_pred hcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----C
Q 006178 362 FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----F 433 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~ 433 (658)
+.+.||+|+||.||+|.... +..+|+|++..... .....+.+.+|++.++.++||||+++++++.+.+. .
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 34789999999999998753 35789998754322 22334578999999999999999999998866442 1
Q ss_pred ceEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 434 TRMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
..+++|||+++|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 369999999999999998532 223689999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
|+++................+..|+|||.+.+..++.++|||||||++|||++ |..||...... +.......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~----- 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRH----- 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc-----
Confidence 99886543322222222333457999999988899999999999999999999 88998654321 11111111
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
......+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 231 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 -----GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -----CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111112233456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=326.21 Aligned_cols=257 Identities=21% Similarity=0.286 Sum_probs=196.2
Q ss_pred hcccccCCCCeeEEEEEecCCC---eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCc
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~ 434 (658)
+.+.||+|+||.||+|...++. .+|+|.+.... ......+.+.+|++++++++|+||+++++++.... ...
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI--CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCc--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3478999999999999986543 47777664322 12233567889999999999999999999875422 114
Q ss_pred eEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 435 RMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
.+++|||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999887422 223589999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
+++.+..............+..|++||+..+..++.++||||||+++|||++ |+.||..... ........ ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~-~~~~-- 232 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLR-QGNR-- 232 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH-cCCC--
Confidence 9887543222122223334567999999998899999999999999999999 8899865322 11111111 1110
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
...+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 233 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 -------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011223345688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=335.67 Aligned_cols=245 Identities=18% Similarity=0.139 Sum_probs=194.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+++.. +++.+|+|.+..... ........+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~Ey~ 77 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD--RLCFVMEYV 77 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--EEEEEEeCC
Confidence 46999999999999976 578899988754321 12233457889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++........
T Consensus 78 ~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~- 151 (328)
T cd05593 78 NGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT- 151 (328)
T ss_pred CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc-
Confidence 9999999987543 489999999999999999999999 9999999999999999999999999998753221111
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ........... ..++..
T Consensus 152 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--~~~~~~~~~~~-----------~~~p~~ 217 (328)
T cd05593 152 -MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILMED-----------IKFPRT 217 (328)
T ss_pred -cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--HHHHHHhccCC-----------ccCCCC
Confidence 1122345679999999999999999999999999999999999965332 11111111110 012223
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
.+..+.+++.+||+.||++|| ++.|+++.
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 345678999999999999997 88988764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=335.40 Aligned_cols=245 Identities=18% Similarity=0.140 Sum_probs=193.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+++.. +|..||+|.+...... .......+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYA 77 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--EEEEEEeCC
Confidence 46999999999999975 5788999987543221 2223456788999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~- 151 (323)
T cd05595 78 NGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT- 151 (323)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc-
Confidence 9999999887544 489999999999999999999999 9999999999999999999999999988753221111
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.....++..|+|||++.+..++.++|||||||++|||++|+.||...... .......... ..++..
T Consensus 152 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~~~~~~~-----------~~~p~~ 217 (323)
T cd05595 152 -MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILMEE-----------IRFPRT 217 (323)
T ss_pred -cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCC-----------CCCCCC
Confidence 11223456799999999999999999999999999999999999654321 1111111110 012223
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
.+..+.+++.+||+.||++|| ++.++++.
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 346678999999999999998 78888753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=333.66 Aligned_cols=246 Identities=15% Similarity=0.141 Sum_probs=193.2
Q ss_pred ccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|+||.||+++.. .++.+|+|.+..............+.+|++++++++||||+++++++...+ ..++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG--KLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC--eEEEEE
Confidence 57999999999999863 567899998754322222233456789999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 80 EYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred eCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 9999999999997554 478899999999999999999999 99999999999999999999999999987532211
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||++.+..++.++|||||||++|||++|+.||...... .......... ...
T Consensus 155 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--~~~~~~~~~~-----------~~~ 219 (323)
T cd05584 155 T--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--KTIDKILKGK-----------LNL 219 (323)
T ss_pred C--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCC-----------CCC
Confidence 1 112223456799999999888999999999999999999999999654321 1112111110 012
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|| ++.++++.
T Consensus 220 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 220 PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 223345688999999999999999 78887663
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=336.36 Aligned_cols=245 Identities=17% Similarity=0.195 Sum_probs=194.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 21 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 97 (329)
T PTZ00263 21 EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-KMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN--RVYFLL 97 (329)
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC--EEEEEE
Confidence 44589999999999999986 5678999887543211 1223456889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 9999999999997654 489999999999999999999999 99999999999999999999999999987653211
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ............ .+
T Consensus 173 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~~~~~-----------~~ 234 (329)
T PTZ00263 173 -----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--FRIYEKILAGRL-----------KF 234 (329)
T ss_pred -----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--HHHHHHHhcCCc-----------CC
Confidence 122345679999999999999999999999999999999999965432 111111111100 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
+......+.+++.+||+.||++||+ ++|+++.
T Consensus 235 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 235 PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 2223356789999999999999997 6777644
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=299.27 Aligned_cols=262 Identities=18% Similarity=0.233 Sum_probs=201.1
Q ss_pred hhhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---CCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---~~~~ 435 (658)
+.+.+.+|+|||+.||.++. .+++.+|+|++...+. ...+..++|++..++++||||++++++...+. ....
T Consensus 23 yri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~----~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 23 YRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ----EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred EEEeeeecCCCceeeeeecccCcccchhhheeeccch----HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34568899999999999994 5778999999976542 23567889999999999999999999875432 2358
Q ss_pred EEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 436 MLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
||+++|...|+|.+.+... ++..+++.+++.|+.+|++||++||+. .|++.||||||.|||+.+++.+++.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999998743 344699999999999999999999997 4569999999999999999999999999887
Q ss_pred hhhhcCCCCC-------CcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhc
Q 006178 514 TILARSEKNP-------GTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE 583 (658)
Q Consensus 514 ~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 583 (658)
...-.-.... ......+..|+|||.+.- ...++++|||||||++|+|+.|..||+.. ..+
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~----------~~~ 247 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI----------YQQ 247 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH----------hhc
Confidence 5431111110 111223567999999863 45789999999999999999999999521 111
Q ss_pred CCcccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 584 LPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 584 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.....-.+..+.+. +.....++.+.++++.|++.||.+||++.+++..++.+.
T Consensus 248 GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11111122222221 112225677899999999999999999999999998764
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=332.73 Aligned_cols=244 Identities=17% Similarity=0.190 Sum_probs=195.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 81 (291)
T cd05612 5 RIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR--FLYMLME 81 (291)
T ss_pred eeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC--eEEEEEe
Confidence 4578999999999999986 5788999987543211 1223456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~- 155 (291)
T cd05612 82 YVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT- 155 (291)
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCCc-
Confidence 999999999997554 489999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ........... ..++
T Consensus 156 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~-----------~~~~ 218 (291)
T cd05612 156 ----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--FGIYEKILAGK-----------LEFP 218 (291)
T ss_pred ----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC-----------cCCC
Confidence 112345679999999998999999999999999999999999965432 11111111110 0122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
......+.+++.+||+.||.+||+ ++|+++.
T Consensus 219 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 219 RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 223456889999999999999995 7777755
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=326.36 Aligned_cols=247 Identities=17% Similarity=0.230 Sum_probs=195.0
Q ss_pred hhhc--ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~--~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
++|. +.||+|+||.||.|+-++ |..+|+|++.+.. .......+..+.|-.+|...++|.||++|-.|.+.+ +.|
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~-M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~--~LY 217 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE-MLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE--YLY 217 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHH-HHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC--eeE
Confidence 4454 799999999999999775 6667777765443 333344567889999999999999999999999988 899
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
|||||++|||+..+|...+ .|++..+..++.+++.|++-+|+. |+|||||||+|+|||..|++||+|||++..+.
T Consensus 218 LiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999999998665 499999999999999999999999 99999999999999999999999999986543
Q ss_pred hcC---------------------CCC-----C-------------------CcccccCccccCCcccccCCCCccccch
Q 006178 517 ARS---------------------EKN-----P-------------------GTLGSQGAICILPSSLEARHLDVQGNIY 551 (658)
Q Consensus 517 ~~~---------------------~~~-----~-------------------~~~~~~~~~~~aPE~~~~~~~~~ksDVw 551 (658)
... ... . .....+++-|||||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 100 000 0 0112356789999999999999999999
Q ss_pred hhHHHHHHHHhCCCCCCCCCC-----cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC--
Q 006178 552 AFGVLLLEIISGRPPCCKDKG-----NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPS-- 624 (658)
Q Consensus 552 S~Gvvl~elltG~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-- 624 (658)
|+|||+|||+.|.+||+.+.. .+..|... +..+.. .....+..+||.+|+. ||++|--
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-l~fP~~-------------~~~s~eA~DLI~rll~-d~~~RLG~~ 437 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET-LKFPEE-------------VDLSDEAKDLITRLLC-DPENRLGSK 437 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-ccCCCc-------------CcccHHHHHHHHHHhc-CHHHhcCcc
Confidence 999999999999999987653 23333221 111111 1122668899999999 9999964
Q ss_pred -HHHHH
Q 006178 625 -MQELC 629 (658)
Q Consensus 625 -~~evl 629 (658)
++||-
T Consensus 438 G~~EIK 443 (550)
T KOG0605|consen 438 GAEEIK 443 (550)
T ss_pred cHHHHh
Confidence 55544
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=352.43 Aligned_cols=250 Identities=16% Similarity=0.213 Sum_probs=195.7
Q ss_pred hhhcccccCCCCeeEEEEEecC--CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|.... +..||+|++.... ......+.+|+.++++++|||||++++++...+ ..++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~l 142 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDD--KLLL 142 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC--EEEE
Confidence 3445899999999999998653 4567777653222 223356788999999999999999999998887 7899
Q ss_pred EEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 438 VFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
||||+++|+|.+++... ...++++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 99999999999988642 234689999999999999999999999 9999999999999999999999999999875
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.............++..|+|||++.+..++.++|||||||++|||+||+.||..... ......... ..
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--~~~~~~~~~----------~~ 287 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--REIMQQVLY----------GK 287 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHh----------CC
Confidence 432221122223356679999999999999999999999999999999999965332 222221111 11
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
....+...+..+.+++.+||+.||++||++.+++.
T Consensus 288 ~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 288 YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11122234466889999999999999999999875
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=332.43 Aligned_cols=257 Identities=18% Similarity=0.205 Sum_probs=194.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||++++. ++..+|+|.+.... .....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 84 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEH 84 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEeec
Confidence 478999999999999987 45667777664321 2234567999999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 158 (331)
T cd06649 85 MDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 158 (331)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc--
Confidence 99999999997544 4899999999999999999999851 59999999999999999999999999987653221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhh-cCCcccc----------
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYL-ELPEVMS---------- 589 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~-~~~~~~~---------- 589 (658)
.....++..|+|||++.+..++.++|||||||++|||+||+.||........ ....... .......
T Consensus 159 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 159 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred --cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 1122345679999999999999999999999999999999999964332111 1100000 0000000
Q ss_pred ----------------------cccCCcCCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 590 ----------------------YVVDPELKHF-SYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 590 ----------------------~~~~~~~~~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
.+........ ....+.++.+|+.+||+.||++|||+.|+++.-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000 112346789999999999999999999998764
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-40 Score=333.11 Aligned_cols=263 Identities=23% Similarity=0.309 Sum_probs=213.4
Q ss_pred HHHHHHhhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC
Q 006178 354 ELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (658)
Q Consensus 354 ~l~~~~~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 432 (658)
|+++......++||-|.||.||.|.++. .-.||||.++... -..++|.+|+.+|+.++|||+|+++|+|....+
T Consensus 263 EmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-----MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 263 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred hccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-----hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 3333333334899999999999999875 4578888874322 235689999999999999999999999999886
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
+ |||+|||.+|+|.+||++..+..++.-..+.++.||+.|++||..+ ++|||||...|+|+.++..+||+|||++
T Consensus 338 F--YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 338 F--YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred e--EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 5 9999999999999999987777788888999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
+.+..+.. ........+..|.|||.+....++.|+|||+|||+|||+.| |..||.+-+...+ ...++....
T Consensus 413 RlMtgDTY-TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV---Y~LLEkgyR---- 484 (1157)
T KOG4278|consen 413 RLMTGDTY-TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YGLLEKGYR---- 484 (1157)
T ss_pred hhhcCCce-ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH---HHHHhcccc----
Confidence 98754322 11111223566999999999999999999999999999999 8999876442211 111111111
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.+.++.+++.+++||+.||+++|.+||++.|+-+.++.+...+
T Consensus 485 -----M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 485 -----MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred -----ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 1345677888999999999999999999999999999887654
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=327.60 Aligned_cols=266 Identities=20% Similarity=0.276 Sum_probs=198.1
Q ss_pred hcccccCCCCeeEEEEEec-----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||++..+ ++..+|+|++.... ....+.+.+|++++++++||||+++++++...+....+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4478999999999999853 46789999874332 23345789999999999999999999988654433679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++.+.
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999997543 2589999999999999999999999 99999999999999999999999999988754
Q ss_pred hcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc---cccc
Q 006178 517 ARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM---SYVV 592 (658)
Q Consensus 517 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 592 (658)
...... ....+..+..|+|||+..+..++.++|||||||++|||++|..|+..................... .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 322211 111223345689999999889999999999999999999998775432211110000000000000 0000
Q ss_pred C-CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 593 D-PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 593 ~-~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
. ......+...+..+.+++.+||+.+|++|||+.||++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0 011112233456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=334.85 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=197.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+...... .....+.+.+|++++.+++||||+++++++.+.+ ..++|||
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e 81 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-KLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE--YLYLAME 81 (333)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC--EEEEEEe
Confidence 3478999999999999987 4778999987543211 1223456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 82 YVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 999999999997544 489999999999999999999999 999999999999999999999999999876532
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||++.+..++.++|||||||++|||++|+.||...... +............ ..+......
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~---~~~~~~~~~ 226 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN--ETWENLKYWKETL---QRPVYDDPR 226 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH--HHHHHHHhccccc---cCCCCCccc
Confidence 112223456799999999999999999999999999999999999754321 1111111100000 011111001
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+.++.+++.+||+.+|.+||++.|+++.
T Consensus 227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 2345678899999999999999999999965
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=323.57 Aligned_cols=249 Identities=19% Similarity=0.286 Sum_probs=196.0
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd05113 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR--PIYIVTE 79 (256)
T ss_pred EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--CcEEEEE
Confidence 35588999999999999988777899998753321 2356899999999999999999999998777 5699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++..... .+++..++.++.||+.||+|||+. +++|+||||+||++++++.+||+|||.++.......
T Consensus 80 ~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 80 YMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred cCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 9999999999975443 589999999999999999999999 999999999999999999999999998876432211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
...........|++||...+..++.++|||||||++|||+| |+.||...... ......... .. ...
T Consensus 156 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~-~~---------~~~ 222 (256)
T cd05113 156 -TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQG-LR---------LYR 222 (256)
T ss_pred -eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhcC-CC---------CCC
Confidence 11111112345899999988889999999999999999999 99998643321 111111111 00 001
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
+...+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1123467889999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=321.77 Aligned_cols=248 Identities=23% Similarity=0.307 Sum_probs=194.6
Q ss_pred cccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.||+|+||.||+|.++ ++..+|+|.+.... ......+++.+|+.++++++||||+++++++... ..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVRMIGICEAE---SWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC--CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CcEEEEec
Confidence 6899999999999753 56788888764332 2233456789999999999999999999998643 45899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+......
T Consensus 77 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 77 AELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 99999999997543 489999999999999999999999 9999999999999999999999999998765432211
Q ss_pred C-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 N-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ....+..+..|+|||.+....++.++|||||||++|||+| |+.||...... .+....... . ....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~-~---------~~~~ 219 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESG-E---------RMEC 219 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCC-C---------CCCC
Confidence 1 1112223467999999988889999999999999999998 99999654322 221111110 0 0112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
+...+.++.+++.+||+.||++||++.+|.+.|++
T Consensus 220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 22345678899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=328.15 Aligned_cols=261 Identities=20% Similarity=0.210 Sum_probs=190.6
Q ss_pred hhcccccCCCCeeEEEEEec--CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc---cCCCccceeeEEecC---CC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES---SP 432 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~---~~ 432 (658)
.+.+.||+|+||.||+|+.. ++..+|+|++...... ......+.+|+.+++++ +||||+++++++... ..
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 4 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred ceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 34578999999999999873 4577888887543322 11223466787777766 699999999998532 12
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
...++||||++ ++|.+++.......+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 25799999996 6999999765555689999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCC--cccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELP--EVMS 589 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~--~~~~ 589 (658)
+..... .......++..|+|||.+.+..++.++|||||||++|||++|++||..... .....+......+ ....
T Consensus 158 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 158 RIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred EeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 764322 111222345679999999988999999999999999999999999975432 1111111111100 0000
Q ss_pred -------cccCCcCC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 590 -------YVVDPELK----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 590 -------~~~~~~~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
....+... ...+..+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000000 011123456789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-39 Score=324.94 Aligned_cols=254 Identities=19% Similarity=0.241 Sum_probs=193.8
Q ss_pred cccccCCCCeeEEEEEec-CCCe----EEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.||+|+||.||+|.+. ++.. +++|++... .......++..|+.++++++||||+++++++... ..++
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~---~~~~ 85 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR---SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA---SLQL 85 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccc---cchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC---ccEE
Confidence 478999999999999975 3443 555554221 1123345688889999999999999999988543 4589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
++||+++|+|.+++..... .+++..+..++.||+.||+|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRD-SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 9999999999999975433 589999999999999999999999 999999999999999999999999999876543
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH-HHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL-VDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 595 (658)
...........++..|++||.+.+..++.++|||||||++|||+| |+.||....... .+... ..... ..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~----~~~~~---~~~- 233 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE----KGERL---AQP- 233 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH----CCCcC---CCC-
Confidence 222111112223346999999998899999999999999999998 999996543221 11111 11100 011
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
...+..+.+++.+||..||++|||+.|+++.|..+.+.+
T Consensus 234 -----~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 234 -----QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 112345778999999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=322.05 Aligned_cols=248 Identities=18% Similarity=0.278 Sum_probs=195.5
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 7 ~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd05059 7 TFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR--PIFIVTE 79 (256)
T ss_pred chhhhhccCCCceEEEeEecCCccEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--ceEEEEe
Confidence 35588999999999999988777899988743222 2346888999999999999999999998777 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..+.. .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 80 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 80 YMANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred cCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 9999999999975443 589999999999999999999999 999999999999999999999999998876432111
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
...........|+|||.+.+..++.++||||||+++|||+| |+.||...... +........ ... ..
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~-------~~~---~~ 222 (256)
T cd05059 156 -TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSAG-------YRL---YR 222 (256)
T ss_pred -cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHHcC-------CcC---CC
Confidence 11111112346999999999999999999999999999999 89998643321 111111110 000 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
+...+..+.+++.+||+.+|++|||+.|+++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 122456788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=329.74 Aligned_cols=259 Identities=17% Similarity=0.206 Sum_probs=193.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+...+.||+|+||.||++.+. ++..+|+|.+.... .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 7 y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 81 (333)
T cd06650 7 FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISIC 81 (333)
T ss_pred hheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--EEEEE
Confidence 344588999999999999987 45666666654321 1233467899999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+|||+++++.+||+|||++..+...
T Consensus 82 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 82 MEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 99999999999997544 4899999999999999999999741 6999999999999999999999999998765322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc---------
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--------- 589 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 589 (658)
.. ....++..|+|||.+.+..++.++|||||||++|||++|+.||......................
T Consensus 158 ~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 158 MA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred cc----ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence 11 11234567999999998899999999999999999999999996543221111110000000000
Q ss_pred -----------------------cccCCcCCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 -----------------------YVVDPELKHFS-YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 -----------------------~~~~~~~~~~~-~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+........+ .....++.+|+.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00000000000 0123568899999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=326.19 Aligned_cols=258 Identities=15% Similarity=0.133 Sum_probs=192.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+++ +++.+|+|++..... .....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 80 (287)
T cd07848 5 VLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLKQENIVELKEAFRRRG--KLYLVFE 80 (287)
T ss_pred EEEEecccCCEEEEEEEECCCCcEEEEEEEecccc--cccchhhHHHHHHHHHhCCCccccchhhhEecCC--EEEEEEe
Confidence 4578999999999999987 467788888754322 1233456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99987666554322 3589999999999999999999999 999999999999999999999999999886532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH-HHHh------------hcCCcc
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW-AKDY------------LELPEV 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~-~~~~------------~~~~~~ 587 (658)
. ......++..|+|||++.+..++.++|||||||++|||++|+.||.......... .... ...+ .
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 233 (287)
T cd07848 156 A-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP-R 233 (287)
T ss_pred c-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc-h
Confidence 1 1112234567999999998899999999999999999999999997543211100 0000 0000 0
Q ss_pred cccccCCcCC-------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 MSYVVDPELK-------HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 ~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
......+... ......+..+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 011123567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=325.30 Aligned_cols=266 Identities=17% Similarity=0.207 Sum_probs=199.8
Q ss_pred hcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||+||++.+ .++..+|+|.+..... ....+.+.+|++++++++||||+++++++...+....+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG---QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 457899999999988653 3567888887743321 22345788999999999999999999998765444679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++... .+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+.
T Consensus 85 lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999999754 489999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcC--CcccccccC
Q 006178 517 ARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL--PEVMSYVVD 593 (658)
Q Consensus 517 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 593 (658)
...... .......+..|++||...+..++.++||||||+++|||+||+.||................. ........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 322111 11122334568999999888999999999999999999999999864332211111100000 000000111
Q ss_pred Cc-CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 594 PE-LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 594 ~~-~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.. ....+...+..+.+++.+||+.+|++|||++++++.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11 11123344577999999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=337.25 Aligned_cols=246 Identities=20% Similarity=0.168 Sum_probs=194.7
Q ss_pred hhhcccccCCCCeeEEEEEecC--CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|.+++ +..+|+|++..... ......+.+.+|+.+++.++||||+++++++.+.+ ..++
T Consensus 32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~l 108 (340)
T PTZ00426 32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES--YLYL 108 (340)
T ss_pred cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC--EEEE
Confidence 4455899999999999998654 35788888754321 12223456889999999999999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999997654 489999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. .....++..|+|||++.+..++.++|||||||++|||+||+.||....... ......... .
T Consensus 184 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~~~~i~~~~-----------~ 245 (340)
T PTZ00426 184 R-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL--IYQKILEGI-----------I 245 (340)
T ss_pred C-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH--HHHHHhcCC-----------C
Confidence 1 112234567999999998889999999999999999999999997543211 111111110 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
.++...+..+.+++.+|++.||++|+ +++|+++.
T Consensus 246 ~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11222335578999999999999995 78888764
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=321.21 Aligned_cols=252 Identities=17% Similarity=0.233 Sum_probs=198.7
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.++||+|+||.||+|++.++..+|+|++..... ..+.+.+|++++++++||||+++++++.+ . ..++||
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~--~~~lv~ 79 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 79 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-----CHHHHHHHHHHHHhCCCCCcceEEEEECC-C--CcEEEE
Confidence 456689999999999999988777889888753221 23568999999999999999999998754 3 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.......+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||.++.+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999999865444689999999999999999999999 99999999999999999999999999987653222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......++..|++||+..+..++.++||||||+++|||+| |+.||....... ........ ....
T Consensus 157 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~----------~~~~ 223 (262)
T cd05071 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERG----------YRMP 223 (262)
T ss_pred cc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHHHHhcC----------CCCC
Confidence 11 1111122346999999988899999999999999999999 888886443211 11111100 0011
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.+...+..+.+++.+|++.||++||++.++++.|++.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 2234556788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=320.75 Aligned_cols=251 Identities=19% Similarity=0.279 Sum_probs=198.2
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
..+.+.||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.++++++|+|++++++++.+ . ..+++|
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~--~~~lv~ 79 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-----SPESFLEEAQIMKKLRHDKLVQLYAVVSE-E--PIYIVT 79 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCCCC-----CHHHHHHHHHHHHhcCCCceEEEEeEECC-C--CcEEEE
Confidence 345688999999999999988888899988754322 23568999999999999999999998854 3 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.++++......+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++..+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999999865545689999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. .......+..|+|||...+..++.++||||||+++|||++ |+.||..... .+........ . ...
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~-~---------~~~ 223 (260)
T cd05070 157 YT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQVERG-Y---------RMP 223 (260)
T ss_pred cc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcC-C---------CCC
Confidence 11 1111122346999999988899999999999999999999 8999865332 1111111110 0 001
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.+...+..+.+++.+||+.+|++|||+.++.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 222344678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-39 Score=328.38 Aligned_cols=255 Identities=22% Similarity=0.275 Sum_probs=197.8
Q ss_pred hcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.||+|+||.||++...+ ...+|+|.+.... ......++.+|+++++++ +|+||+++++++...+ .
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~ 90 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG--P 90 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC--C
Confidence 34789999999999998753 2467777764321 122345688999999999 8999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC
Q 006178 435 RMLVFDYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 500 (658)
.+++|||+++|+|.++++.. ....+++..++.++.|++.||+|||+. +|+||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 79999999999999998642 234689999999999999999999999 9999999999999999
Q ss_pred CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHH
Q 006178 501 DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 501 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 579 (658)
++.+||+|||+++.+...........+.....|+|||.+.+..++.++|||||||++|||++ |..||...... +...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~ 245 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--ELFK 245 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--HHHH
Confidence 99999999999886543221111122223356899999988899999999999999999998 99998643321 1111
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
..... . ....+...+..+.+++.+||+.||++|||+.|+++.|++++
T Consensus 246 ~~~~~-~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLKEG-Y---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHcC-C---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11110 0 01122233466889999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=320.44 Aligned_cols=249 Identities=19% Similarity=0.272 Sum_probs=193.9
Q ss_pred cccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.||+|+||.||+|.+. ++..+|+|.+.... .....+.+.+|+.++++++||||+++++++... ..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~---~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE---ALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC---CeEEEEEe
Confidence 4899999999999864 34467887764332 233456799999999999999999999988543 56999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... ..+++..+++++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++........
T Consensus 76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 151 (257)
T cd05115 76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY 151 (257)
T ss_pred CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccc
Confidence 99999999987433 3589999999999999999999999 9999999999999999999999999998765332221
Q ss_pred CC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. ...+..+..|+|||.+.+..++.++|||||||++||+++ |..||...... .+....... . ....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~-~---------~~~~ 219 (257)
T cd05115 152 YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQG-K---------RLDC 219 (257)
T ss_pred eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCC-C---------CCCC
Confidence 11 112223467999999988889999999999999999996 99999654321 111111111 0 1112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
+...+.++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 233456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=328.47 Aligned_cols=257 Identities=21% Similarity=0.332 Sum_probs=196.8
Q ss_pred hhcccccCCCCeeEEEEEecC-CCe--EEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPE--IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~--vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|.+.+ +.. +++|++.. .......+.+.+|++++.++ +||||+++++++.+.+ ..+
T Consensus 10 ~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~---~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~--~~~ 84 (303)
T cd05088 10 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLY 84 (303)
T ss_pred eeeeeecCCCCceEEEEEEccCCceeeEEEEEecc---cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC--Cce
Confidence 455899999999999999753 443 45555432 11223456788999999999 8999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC
Q 006178 437 LVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 502 (658)
+||||+++|+|.++++... ...+++.+++.++.|++.||+|||++ +++||||||+|||+++++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCC
Confidence 9999999999999997432 13588999999999999999999999 999999999999999999
Q ss_pred CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHh
Q 006178 503 SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 503 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 581 (658)
.+||+|||+++..... ........+..|+|||++.+..++.++|||||||++|||+| |..||...... +.....
T Consensus 162 ~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~ 236 (303)
T cd05088 162 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL 236 (303)
T ss_pred cEEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHHH
Confidence 9999999988642211 11112223456999999988889999999999999999998 99998643321 111111
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
... .. ...+...+..+.+++.+||+.+|++||++.++++.|+++.....
T Consensus 237 ~~~-------~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 237 PQG-------YR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred hcC-------Cc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 100 00 01111234567899999999999999999999999998765443
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=320.44 Aligned_cols=254 Identities=17% Similarity=0.280 Sum_probs=200.5
Q ss_pred HHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 357 ~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
..++.+.++||+|+||.||+|..++++.+|+|.+..... ..+++.+|+.++++++|+||+++++++.. + ..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-----SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-E--PIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-----cHHHHHHHHHHHHhcCCcCeeeEEEEEcc-C--CcE
Confidence 445556789999999999999998899999998753322 23578899999999999999999998754 3 569
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
++|||+++|+|.+++.......+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 999999999999998765555789999999999999999999998 99999999999999999999999999987653
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... .......+..|+|||++....++.++||||||+++|||++ |+.||..... .......... .. .
T Consensus 154 ~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~-~~------~- 222 (260)
T cd05067 154 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--PEVIQNLERG-YR------M- 222 (260)
T ss_pred CCCcc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHHHcC-CC------C-
Confidence 21111 1111122356999999998889999999999999999999 9999964432 1111111111 00 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
..+...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus 223 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 --PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1112234568899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=324.18 Aligned_cols=249 Identities=17% Similarity=0.126 Sum_probs=193.6
Q ss_pred ccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||+|+||.||+++.+ +|+.+|+|++..+... .....+.+..|++++++++||||+++++++.+.. +.++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~--~~~lv~e~~~g 77 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLK-KKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT--HLCLVMSLMNG 77 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhh-cchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC--eEEEEEecCCC
Confidence 799999999999976 5788999988543221 1122345667999999999999999999998877 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........ .
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~---~ 151 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT---I 151 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce---e
Confidence 9999988765555689999999999999999999999 999999999999999999999999999876532211 1
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH--HHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--VDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
....++..|+|||++.+..++.++||||+||++|||++|+.||....... .......... ........
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 221 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED----------EVKFEHQN 221 (277)
T ss_pred eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc----------cccccccc
Confidence 12234567999999998889999999999999999999999996533211 1111111110 11101112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
.+.++.+++.+||+.||++||++.|+++.+.
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 3456789999999999999999988765444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=323.83 Aligned_cols=255 Identities=19% Similarity=0.222 Sum_probs=197.9
Q ss_pred hcccccCCCCeeEEEEEec-CCC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. ++. .||+|.+.... .....+.+.+|+.+++.++||||+++++++... ..+
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~ 84 (279)
T cd05109 11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT---SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---TVQ 84 (279)
T ss_pred eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC---CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC---CcE
Confidence 3488999999999999864 444 36777764322 233456788999999999999999999999754 457
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
++|||+++|+|.++++... ..+++..++.++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+.
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999997543 2589999999999999999999999 99999999999999999999999999988654
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC-cHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.............+..|++||...+..++.++|||||||++|||+| |..||..... ....+.... ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~------- 229 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG----ER------- 229 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC----Cc-------
Confidence 3221111112223456999999998899999999999999999998 8999864432 122221111 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
...+...+..+.+++.+||+.||++||++.|+++.|+.+...+
T Consensus 230 --~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 230 --LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred --CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0111223456889999999999999999999999998876544
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=326.02 Aligned_cols=258 Identities=19% Similarity=0.306 Sum_probs=199.0
Q ss_pred hhcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
.+.+.||+|+||.||+|..++ +..+|+|.+.... .......+.+|+.++++++||||+++++++.+.. .
T Consensus 9 ~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~ 83 (288)
T cd05061 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ--P 83 (288)
T ss_pred eeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--C
Confidence 345899999999999997542 4478888764222 1223346889999999999999999999998777 6
Q ss_pred eEEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCcee
Q 006178 435 RMLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKL 506 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl 506 (658)
.++||||+++|+|.+++.... ....++..+..++.|++.||+|||++ +|+||||||+||++++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 799999999999999997422 23457788999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCC
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 585 (658)
+|||+++................+..|+|||.+.+..++.++|||||||++|||++ |..||..... .+......
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~--- 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFVM--- 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---
Confidence 99999876543222222222333466999999998899999999999999999999 7888864322 11211111
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+......+...+..+.+++.+||+.||++|||+.|+++.|++....
T Consensus 236 -------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 236 -------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred -------cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 1111112223346789999999999999999999999999986543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=326.14 Aligned_cols=256 Identities=20% Similarity=0.247 Sum_probs=196.8
Q ss_pred cccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 363 SNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.||+|+||.||+|+... ...+++|.+.... .....+++.+|+.++++++||||+++++.+...+ ..+
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 79 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG--PLL 79 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--CcE
Confidence 4789999999999998642 2356666553222 1223457899999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 437 LVFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
++|||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 9999999999999876321 13588999999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN 573 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~ 573 (658)
||++++++.+||+|||+++................+..|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~- 235 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP- 235 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 99999999999999999876533222211222223456999999988889999999999999999999 9999864331
Q ss_pred HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...... ..... . ...+...+..+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 236 -~~~~~~-~~~~~------~---~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 236 -ERLFNL-LKTGY------R---MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred -HHHHHH-HhCCC------C---CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 111111 11100 0 011223345688999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=330.13 Aligned_cols=260 Identities=23% Similarity=0.254 Sum_probs=201.1
Q ss_pred HhhhcccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEec
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE 429 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 429 (658)
.+.+.+.||+|+||.||+++..+ ...+|+|.+.... ......++.+|+++++++ +||||+++++++..
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 34456899999999999998632 2458888764321 122345688899999999 89999999999988
Q ss_pred CCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcc
Q 006178 430 SSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (658)
Q Consensus 430 ~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~N 495 (658)
.+ ..++||||+++|+|.+++.... ...+++.++++++.|++.||+|||+. +++||||||+|
T Consensus 96 ~~--~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 96 DG--PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred CC--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 77 6799999999999999997532 12489999999999999999999999 99999999999
Q ss_pred eeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH
Q 006178 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL 574 (658)
Q Consensus 496 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~ 574 (658)
|++++++.+||+|||.++.............+..+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-- 248 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 248 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--
Confidence 9999999999999999876532221111222223356999999998889999999999999999998 8888864332
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.......... . ....+...+..+.+++.+||+.+|++|||+.||++.|+++...
T Consensus 249 ~~~~~~~~~~-~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 249 EELFKLLKEG-H---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHcC-C---------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 2221111111 0 0112233446788999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=328.49 Aligned_cols=260 Identities=21% Similarity=0.241 Sum_probs=201.2
Q ss_pred HhhhcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEec
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE 429 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 429 (658)
...+.+.||+|+||.||+|+.. ++..+|+|.+.... .....+.+.+|+.+++.+ +||||+++++++..
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3445589999999999999742 23467777764221 123345788999999999 89999999999988
Q ss_pred CCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcc
Q 006178 430 SSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (658)
Q Consensus 430 ~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~N 495 (658)
.. ..++||||+++|+|.+++.... ...+++.++..++.||++||+|||++ +++||||||+|
T Consensus 93 ~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 93 DG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred CC--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 77 6799999999999999997532 13578999999999999999999999 99999999999
Q ss_pred eeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH
Q 006178 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL 574 (658)
Q Consensus 496 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~ 574 (658)
|++++++.+||+|||+++.+...........+..+..|+|||++.+..++.++||||||+++|||+| |..||.... .
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~ 245 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--V 245 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--H
Confidence 9999999999999999886543222222222333456999999998889999999999999999999 788885432 2
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.++....... .. ...+...+..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 246 ~~~~~~~~~~-~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 EELFKLLKEG-HR---------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHcC-Cc---------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2222221111 00 011223456788999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=333.65 Aligned_cols=276 Identities=22% Similarity=0.253 Sum_probs=207.8
Q ss_pred HHHhhhcccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEE
Q 006178 357 VACEDFSNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYC 427 (658)
Q Consensus 357 ~~~~~f~~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~ 427 (658)
...+.+.+.||+|+||.||+|+... +..+|+|.+.... .....+++.+|+++++++ +||||+++++++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 3345566899999999999997531 2257777654221 223346789999999999 899999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCC
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp 493 (658)
...+ ..+++|||+++|+|.+++.... ...+++.++..++.|++.||+|||++ +++||||||
T Consensus 88 ~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 88 TQDG--PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred ccCC--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 8877 6799999999999999987432 23588999999999999999999999 999999999
Q ss_pred cceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC
Q 006178 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572 (658)
Q Consensus 494 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~ 572 (658)
+||++++++.+||+|||+++.............+..+..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~- 241 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP- 241 (334)
T ss_pred ceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-
Confidence 999999999999999999876543221112222333456999999999999999999999999999999 888886433
Q ss_pred cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHh
Q 006178 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWA 652 (658)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~ 652 (658)
...+....... .....+...+..+.+++.+||+.+|++|||+.|+++.|+++............+.+|.
T Consensus 242 -~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~~~~~~~~~~~~~ 310 (334)
T cd05100 242 -VEELFKLLKEG----------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTSTDEYLDLSVPFE 310 (334)
T ss_pred -HHHHHHHHHcC----------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcCCCCeeeeeeeee
Confidence 22222211111 0011122334568899999999999999999999999999886554433333334444
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=318.91 Aligned_cols=251 Identities=17% Similarity=0.281 Sum_probs=197.4
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
..+.+.||+|+||.||+|...++..+|+|.+..... ..+.+.+|++++++++|+|++++++++.. + ..++||
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~~v~ 79 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-----MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-E--PIYIVT 79 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-----cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-C--CcEEEE
Confidence 344578999999999999988877888887643221 23568899999999999999999998754 3 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.++++......+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999999999765545689999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. ........+..|+|||...+..++.++|||||||++|||+| |+.||...... ......... . . ..
T Consensus 157 ~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~-~------~---~~ 223 (260)
T cd05069 157 Y-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERG-Y------R---MP 223 (260)
T ss_pred c-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-C------C---CC
Confidence 1 11111123456999999988899999999999999999999 89998654321 111111110 0 0 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.+...+..+.+++.+||+.||++||++++|++.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 223345678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=323.94 Aligned_cols=253 Identities=19% Similarity=0.307 Sum_probs=197.1
Q ss_pred hcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|...+ +..+++|.+.... .......+.+|+.+++.++||||+++++++.... ..
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~ 84 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ--PT 84 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--Cc
Confidence 44889999999999998753 3578888864322 1223457889999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 436 MLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 99999999999999986432 12478999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCc
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
|||+++.+..............+..|+|||.+.+..++.++|||||||++||++| |+.||...... ....... .
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~~-~-- 236 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLKFVI-D-- 236 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHHHHh-c--
Confidence 9999886543322112222223456999999988889999999999999999998 99998643321 1111111 1
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
......+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 237 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 237 -------GGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred -------CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111222235678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=333.76 Aligned_cols=243 Identities=17% Similarity=0.219 Sum_probs=187.9
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++. +++.||+|.+.... .....+.+.+|++++++++|+||+++++++.+.+ ..++||||
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 153 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG--EIQVLLEF 153 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC--eEEEEEec
Confidence 478999999999999976 57889999874332 2234567899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+.. ..++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 154 ~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 154 MDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred CCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 9999987543 256778889999999999999999 9999999999999999999999999998765422211
Q ss_pred CCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCc
Q 006178 522 NPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.....++..|+|||++.. ...+.++|||||||++|||++|+.||..... ........... ..
T Consensus 225 --~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~----------~~ 292 (353)
T PLN00034 225 --CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM----------SQ 292 (353)
T ss_pred --ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc----------cC
Confidence 112234567999998743 2345699999999999999999999963321 11111111100 00
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 293 ~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011222345678899999999999999999999986
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=334.23 Aligned_cols=245 Identities=18% Similarity=0.140 Sum_probs=192.5
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+++.. +++.+|+|.+..... ........+.+|+++++.++||||+++++++...+ ..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEYA 77 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC--EEEEEEeCC
Confidence 46999999999999975 677889988754321 12223456788999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||+++++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 152 (325)
T cd05594 78 NGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 152 (325)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc
Confidence 9999999887544 48999999999999999999997 6 9999999999999999999999999998753221111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||++.+..++.++|||||||++|||+||+.||...... ........... .++.
T Consensus 153 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~~~~~-----------~~p~ 217 (325)
T cd05594 153 --MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI-----------RFPR 217 (325)
T ss_pred --cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHHhcCCC-----------CCCC
Confidence 11223556799999999999999999999999999999999999654321 11111111100 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
..+..+.+++.+||+.||++|+ ++.++++.
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 218 TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 2345678999999999999996 89998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=331.63 Aligned_cols=262 Identities=19% Similarity=0.239 Sum_probs=198.2
Q ss_pred HhhhcccccCCCCeeEEEEEe------cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC
Q 006178 359 CEDFSNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS 431 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 431 (658)
.+.+.+.||+|+||.||+|.+ .+++.||||.+..... ......+.+|+.++.++ +||||+++++++...+
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC---hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 344568999999999999974 2467899998753221 22345688999999999 7899999999887654
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------------------------------------------------
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGE-------------------------------------------------------- 455 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~-------------------------------------------------------- 455 (658)
. ..++||||+++|+|.+++....
T Consensus 85 ~-~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 85 G-PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred C-ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 3 5689999999999999986421
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcc
Q 006178 456 ---------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL 526 (658)
Q Consensus 456 ---------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 526 (658)
...+++..+..++.||++||+|||++ +|+||||||+||++++++.+||+|||+++.............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12368889999999999999999999 999999999999999999999999999876532221111111
Q ss_pred cccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHH
Q 006178 527 GSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLK 605 (658)
Q Consensus 527 ~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (658)
...+..|+|||.+.+..++.++||||||+++|||++ |..||........ ........ .. ...+...+.
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~-~~---------~~~~~~~~~ 309 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEG-TR---------MRAPDYTTP 309 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHHHhcc-CC---------CCCCCCCCH
Confidence 223456999999988899999999999999999997 9999865332211 11111100 00 001111234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 606 VICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 606 ~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 678999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=330.22 Aligned_cols=243 Identities=20% Similarity=0.211 Sum_probs=187.9
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.||+|.+...... .....+.+..|..++... +||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~--~~~lv~e~ 77 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE--HLFFVMEY 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 46999999999999986 4677888887543211 122234556677777655 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 78 ~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~- 151 (316)
T cd05592 78 LNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG- 151 (316)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC-
Confidence 99999999987554 489999999999999999999999 999999999999999999999999999875432221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
......++..|+|||.+.+..++.++|||||||++|||++|+.||...... +........ ...++.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~-----------~~~~~~ 217 (316)
T cd05592 152 -KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--ELFDSILND-----------RPHFPR 217 (316)
T ss_pred -ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcC-----------CCCCCC
Confidence 112223456799999999999999999999999999999999999754321 111111111 011222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQ-ELC 629 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~-evl 629 (658)
..+..+.+++.+||+.||++||++. +++
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 3345678999999999999999875 443
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=323.34 Aligned_cols=257 Identities=18% Similarity=0.175 Sum_probs=191.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. ++..||+|.+...... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 83 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKNLKHANIVTLHDIIHTER--CLTLVFE 83 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC---CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC--eEEEEEe
Confidence 3478999999999999976 5678888887543221 12345779999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ |+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 84 ~~~-~~l~~~l~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 84 YLD-SDLKQYLDNCGN-LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CCC-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 997 499998865432 578999999999999999999999 999999999999999999999999999875432211
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--cccc-------
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMS------- 589 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~------- 589 (658)
......++..|+|||.+.+ ..++.++||||+||++|||+||+.||...... ...........+ +...
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 159 --TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred --cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 1122234567999999865 56899999999999999999999999754321 111111111100 0000
Q ss_pred --cccCCcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 590 --YVVDPELKHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 590 --~~~~~~~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
....+..... ......+..+++.+|++.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0011111000 0122356789999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=324.12 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=194.2
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.++||+|+||.||++... ++..+++|.+... .....+.+.+|++++++++|+||+++++++.+.+ ..
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 82 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR--PL 82 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC--ce
Confidence 3478999999999999743 3456777765322 2234567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGER-------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 502 (658)
+++|||+++|+|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||++++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCC
Confidence 999999999999999875421 2489999999999999999999999 999999999999999999
Q ss_pred CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHh
Q 006178 503 SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 503 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 581 (658)
.+||+|||+++................+..|+|||...+..++.++|||||||++|||++ |+.||...... ......
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~ 237 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--EAIECI 237 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--HHHHHH
Confidence 999999999875432221111111122456999999999999999999999999999999 89998543221 111111
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
... . ....+...+..+.+++.+||+.||++||++.||.+.|++
T Consensus 238 ~~~-~---------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 238 TQG-R---------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HcC-c---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 110 0 001112334568899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=323.45 Aligned_cols=259 Identities=18% Similarity=0.248 Sum_probs=200.4
Q ss_pred hhhcccccCCCCeeEEEEEecC-----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.+.||+|+||.||+|.+.+ +..+++|++... ......+.+.+|+.++++++|+||+++++++...+. .
T Consensus 8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~ 83 (280)
T cd05043 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH---ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE-P 83 (280)
T ss_pred eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC-C
Confidence 4455899999999999999875 567777776422 223345678899999999999999999998876432 5
Q ss_pred eEEEEEecCCCChhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 435 RMLVFDYASNGTLYEHLHYGER------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
.++++||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 7999999999999999865321 3589999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 509 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
||+++.+.............+...|+|||++.+..++.++|||||||++||+++ |+.||..... ..+....... ..
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~-~~ 237 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDG-YR 237 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcC-CC
Confidence 999986543221111111223445999999998889999999999999999999 9999965432 1221111111 00
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
. ..+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 238 ~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 238 L---------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred C---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 0112234568899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=316.11 Aligned_cols=248 Identities=19% Similarity=0.259 Sum_probs=195.6
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecC
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~ 443 (658)
++||+|+||.||+|...++..+|+|.+.... .......+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL---PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ--PIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC--ccEEEEECCC
Confidence 4699999999999998888889998764322 1233456889999999999999999999998877 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCC
Q 006178 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP 523 (658)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 523 (658)
+++|.+++.... ..+++..+..++.|++.||.|+|++ +++||||||+||++++++.+||+|||++......... .
T Consensus 76 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~ 150 (250)
T cd05085 76 GGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-S 150 (250)
T ss_pred CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccc-c
Confidence 999999987543 3589999999999999999999999 9999999999999999999999999988653221111 1
Q ss_pred CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 524 ~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.........|+|||++.+..++.++||||||+++||+++ |..||...... ....... .... ...+..
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~-~~~~---------~~~~~~ 218 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVE-KGYR---------MSCPQK 218 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHH-cCCC---------CCCCCC
Confidence 111222356999999998899999999999999999999 99999654321 1111111 1000 011223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
.+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 4467889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=347.98 Aligned_cols=255 Identities=18% Similarity=0.199 Sum_probs=199.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC------
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------ 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 432 (658)
+.+.+.||+|+||.||+|+.. +++.||+|.+..... .......+.+|+.++..++|+||+++++.+...+.
T Consensus 34 Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 34 YWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred EEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 334589999999999999865 688999998854432 23345568899999999999999999887754331
Q ss_pred CceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
...++||||+++|+|.++++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecc
Confidence 13689999999999999987432 34689999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
+++.+.............++..|+|||.+.+..++.++|||||||++|||++|+.||.... ...........
T Consensus 189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~--~~~~~~~~~~~------ 260 (496)
T PTZ00283 189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN--MEEVMHKTLAG------ 260 (496)
T ss_pred cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHhcC------
Confidence 9886543322222223345677999999999999999999999999999999999996543 22222222111
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+...+..+.+++.+||+.||.+||++.++++.
T Consensus 261 ----~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 ----RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1112233445678899999999999999999999864
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=317.52 Aligned_cols=254 Identities=22% Similarity=0.270 Sum_probs=185.0
Q ss_pred ccccCCCCeeEEEEEecCC---CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGG---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~---~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.||+|+||.||+|...++ ..+++|.+... ........+.+|+++++.++||||+++++++.+.. ..++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~--~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS---ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI--PYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc---CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC--ceEEEEE
Confidence 3699999999999986543 34566654322 12334457889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGER---CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+++|+|.+++..... ...++.....++.||+.||+|||++ +|+||||||+||++++++.+||+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccccc
Confidence 9999999999975432 2356788899999999999999999 999999999999999999999999998865322
Q ss_pred cCCCCCCcccccCccccCCccccc-------CCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA-------RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
............+..|+|||++.. ..++.++|||||||++|||++ |..||....... ........ ...
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~~--~~~ 228 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLKQVVRE--QDI 228 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHHhhc--cCc
Confidence 211111111223456999998743 456889999999999999999 788886443211 11111111 001
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
....+. .+...+..+.+++..|| .||++|||++||++.|.
T Consensus 229 ~~~~~~---~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQ---LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCc---ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111111 12234456678888998 59999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=330.60 Aligned_cols=240 Identities=20% Similarity=0.200 Sum_probs=186.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHH-HHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.+|+|.+....... ....+.+..|.. +++.++||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD--KLYFVLDY 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC--EEEEEEcC
Confidence 46999999999999986 67889999875432211 122334555555 567889999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 151 (323)
T cd05575 78 VNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK- 151 (323)
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC-
Confidence 99999999987544 489999999999999999999999 999999999999999999999999999875322211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
......++..|+|||++.+..++.++|||||||++|||++|+.||.... ..+.......... ..+.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~-----------~~~~ 217 (323)
T cd05575 152 -TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--TAEMYDNILNKPL-----------RLKP 217 (323)
T ss_pred -ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC--HHHHHHHHHcCCC-----------CCCC
Confidence 1122234567999999999999999999999999999999999996543 2222222221111 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQ 626 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~ 626 (658)
..+..+.+++.+||+.||++||++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 2346688999999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=336.09 Aligned_cols=249 Identities=21% Similarity=0.262 Sum_probs=199.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
|..+||+|+|-+||||.+. +|.+||--.+...+........++|..|+++|+.|+|||||++|.++.+.......+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 4578999999999999986 466777544443333334444578999999999999999999999999877656889999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~ 519 (658)
.|..|+|..|+++.++ ++....+.|++||++||.|||++ .|+|||||||.+||+|+.+ |.+||+|+|+|......
T Consensus 124 L~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred cccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 9999999999997765 88999999999999999999997 7899999999999999865 89999999999886432
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcC--CcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL--PEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 597 (658)
......+++.+||||.+. ..|++.+||||||+.|+||+|+..||..= .+-.+..+..... |..+..+-|
T Consensus 200 ---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC-~n~AQIYKKV~SGiKP~sl~kV~d---- 270 (632)
T KOG0584|consen 200 ---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC-TNPAQIYKKVTSGIKPAALSKVKD---- 270 (632)
T ss_pred ---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh-CCHHHHHHHHHcCCCHHHhhccCC----
Confidence 222356788899999987 78999999999999999999999999531 2222222222211 122222223
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+++.++|.+|+.. .++|||+.|+++.
T Consensus 271 -------Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 271 -------PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred -------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 4567999999999 9999999999875
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=324.80 Aligned_cols=257 Identities=19% Similarity=0.276 Sum_probs=198.4
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
..+.+.||+|+||.||++... .+..+|+|.+..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 112 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH---SSEREALMSELKIMSHLGNHENIVNLLGACTIGG- 112 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC---hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC-
Confidence 344589999999999999752 234688887643221 22345789999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
..++||||+++|+|.++++......+++.++..++.|++.||+|||++ +++|+||||+||++++++.+|++|||++
T Consensus 113 -~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 -PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred -ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 679999999999999999765444589999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
+.+..............+..|+|||.+.+..++.++|||||||++|||+| |..||....... .... ......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~-~~~~~~----- 261 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYK-LIKEGY----- 261 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHH-HHHcCC-----
Confidence 76543221111111123456999999999999999999999999999998 999986543211 1111 111100
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.. ..+...+..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 262 -~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 -RM---AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -cC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00 01112345688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=333.08 Aligned_cols=240 Identities=18% Similarity=0.208 Sum_probs=194.5
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
|.++||+|+||+|+.+.++. ++.+|||.+++.. .......+..+.|.+|+... +||.++.++..|...+ +.|.||
T Consensus 372 ~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~-Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~--~l~fvm 448 (694)
T KOG0694|consen 372 LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGD-ILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE--HLFFVM 448 (694)
T ss_pred EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccc-eeccccHHHHHHHHHHHHHhccCCeEeecccccccCC--eEEEEE
Confidence 45899999999999999875 5667777765443 33444566788999998888 5999999999999988 899999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+.|||+..+.+.+ .+++..+.-++..|+.||+|||++ +||+||||.+|||||.+|.+||+|||+++.-....
T Consensus 449 ey~~Ggdm~~~~~~~---~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g 522 (694)
T KOG0694|consen 449 EYVAGGDLMHHIHTD---VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG 522 (694)
T ss_pred EecCCCcEEEEEecc---cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCCC
Confidence 999999966555432 499999999999999999999999 99999999999999999999999999998643222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....-.+++.|||||++.+..|+.++|.|||||+||||++|..||.+++++.. ... ++..+ ..+
T Consensus 523 --~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~--Fds----------I~~d~-~~y 587 (694)
T KOG0694|consen 523 --DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV--FDS----------IVNDE-VRY 587 (694)
T ss_pred --CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHH----------HhcCC-CCC
Confidence 233344567889999999999999999999999999999999999986553211 111 11111 124
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
|...+.+..+++.+++..+|++|--+
T Consensus 588 P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 588 PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCcccHHHHHHHHHHhccCcccccCC
Confidence 55566788899999999999999765
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=331.27 Aligned_cols=251 Identities=16% Similarity=0.149 Sum_probs=193.5
Q ss_pred hcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+++.. +++.+|+|.+............+.+.+|+.+++++ +|+||+++++++...+ ..+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~ 81 (332)
T cd05614 4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA--KLH 81 (332)
T ss_pred EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--EEE
Confidence 4578999999999999863 57789998875432222223345688999999999 5999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++..+. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 82 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 9999999999999997544 489999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCcccccccC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 593 (658)
..... ......++..|+|||.+.+. .++.++|||||||++|||+||+.||..... ............ +
T Consensus 157 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~--------~ 227 (332)
T cd05614 157 SEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC--------D 227 (332)
T ss_pred ccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC--------C
Confidence 22211 11122356679999999865 478999999999999999999999964321 222222221111 1
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
+ ..+...+..+.+++.+||+.||++|| +++++++.
T Consensus 228 ~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 228 P---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred C---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1 11223345678999999999999999 67777754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=319.37 Aligned_cols=250 Identities=21% Similarity=0.330 Sum_probs=192.3
Q ss_pred ccccCCCCeeEEEEEecC-CC--eEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|+||.||+|+..+ +. .+++|.+... ......+.+.+|++++.++ +||||+++++++...+ ..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc---CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC--CceEEE
Confidence 468999999999999864 33 3466655321 1223345788999999999 8999999999998877 679999
Q ss_pred EecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCce
Q 006178 440 DYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 505 (658)
||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 9999999999987432 12478999999999999999999998 999999999999999999999
Q ss_pred eccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcC
Q 006178 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLEL 584 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 584 (658)
|+|||++...... ........+..|+|||++....++.++|||||||++|||+| |..||..... ..........
T Consensus 153 l~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~~~ 227 (270)
T cd05047 153 IADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQG 227 (270)
T ss_pred ECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--HHHHHHHhCC
Confidence 9999987532211 11112223456999999988889999999999999999997 9999864321 1111111110
Q ss_pred CcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.. ...+...+..+.+++.+||+.+|.+|||+.|+++.|+++.
T Consensus 228 -~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 -YR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -CC---------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00 0112223456889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=324.21 Aligned_cols=257 Identities=18% Similarity=0.182 Sum_probs=190.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|++...... .....+.+|+.++++++||||+++++++.+.. ..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 83 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE---GTPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTLVFE 83 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc---ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC--eEEEEEE
Confidence 4588999999999999986 6788999987543321 12345778999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 158 (303)
T cd07869 84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH 158 (303)
T ss_pred CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence 995 68888886543 3589999999999999999999999 999999999999999999999999999875422111
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH--HhhcCCc--cccc-----
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK--DYLELPE--VMSY----- 590 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~--~~~~~~~--~~~~----- 590 (658)
......++..|+|||.+.+ ..++.++||||+||++|||+||+.||............ .....+. ....
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 159 --TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred --cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 1122334567999999865 45889999999999999999999999754332111111 1111000 0000
Q ss_pred ccCC-cCCCC-CH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 591 VVDP-ELKHF-SY---------DDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 591 ~~~~-~~~~~-~~---------~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...+ ..... +. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 00000 00 11246789999999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=320.05 Aligned_cols=255 Identities=20% Similarity=0.311 Sum_probs=198.3
Q ss_pred hhcccccCCCCeeEEEEEecC-CC---eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
++.+.||+|+||.||+|+... +. .+++|++.... .....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY---TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK--PAM 82 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC--CcE
Confidence 345899999999999999753 32 57777764332 1223457889999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++....
T Consensus 83 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 83 IITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999997543 3589999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
....... .........|+|||++....++.++|||||||++|||+| |+.||..... ..+....... .
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~~~-~-------- 227 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAINDG-F-------- 227 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhcC-C--------
Confidence 3221111 111222346999999998889999999999999999998 9999864332 1222211110 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
....+...+..+.+++.+||+.+|++||++.+|++.|++++
T Consensus 228 -~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 228 -RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 00112233466889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=317.56 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=195.3
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||++..+ +..+++|..... ...+.+.+|+.++++++|+|++++++++...+. ..++|||
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~e 80 (256)
T cd05082 9 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTE 80 (256)
T ss_pred eeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC-ceEEEEE
Confidence 34589999999999999875 567888876321 123568899999999999999999998654432 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.......+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 157 (256)
T cd05082 81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157 (256)
T ss_pred CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence 99999999999866555689999999999999999999999 999999999999999999999999998875432211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.......|+|||++.+..++.++|||||||++|||++ |+.||.... ........... . .+ ..
T Consensus 158 -----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~--~~~~~~~~~~~-~------~~---~~ 220 (256)
T cd05082 158 -----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKG-Y------KM---DA 220 (256)
T ss_pred -----CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcC-C------CC---CC
Confidence 1122346999999998899999999999999999998 999986432 22221111110 0 00 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 221 PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 223456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=316.46 Aligned_cols=249 Identities=17% Similarity=0.206 Sum_probs=199.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|++|.||+|... ++..+++|.+..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd08529 4 ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--NRREREEAIDEARVLAKLDSSYIIRYYESFLDKG--KLNIVME 79 (256)
T ss_pred EeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC--EEEEEEE
Confidence 4578999999999999976 578888888754322 2334567899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999999865445799999999999999999999998 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....+...|+|||+..+..++.++|||||||++|||+||+.||..... ......... ......+
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~----------~~~~~~~ 222 (256)
T cd08529 157 F--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKIIR----------GVFPPVS 222 (256)
T ss_pred h--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHc----------CCCCCCc
Confidence 1 1122345668999999999999999999999999999999999965431 111111111 1111222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.+|++||++.++++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 2445678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=316.93 Aligned_cols=249 Identities=22% Similarity=0.299 Sum_probs=195.2
Q ss_pred ccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
++||+|+||.||+|++.. +..+|+|.+...... ...+++.+|++++++++|+||+++++++... ..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---AGKKEFLREASVMAQLDHPCIVRLIGVCKGE---PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC---ceEEEE
Confidence 479999999999998643 257888877433321 3456789999999999999999999987643 469999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~ 149 (257)
T cd05060 75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGS 149 (257)
T ss_pred EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCC
Confidence 9999999999998654 589999999999999999999999 99999999999999999999999999988654322
Q ss_pred CCCCC-cccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPG-TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~-~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
..... ..+..+..|+|||...+..++.++|||||||++|||++ |..||...... ...+.. .. ..
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~---~~-~~--------- 216 (257)
T cd05060 150 DYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE---SG-ER--------- 216 (257)
T ss_pred cccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH---cC-Cc---------
Confidence 21111 11222346999999998899999999999999999998 99999654321 112111 11 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
...+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus 217 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0112233467889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=323.74 Aligned_cols=261 Identities=18% Similarity=0.252 Sum_probs=194.2
Q ss_pred hhhcccccCCCCeeEEEEEecCC---------------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCcccee
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGG---------------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLL 424 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~---------------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~ 424 (658)
+.+.+.||+|+||.||+++..+. ..+|+|++.... .......|.+|++++++++|+||++++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 7 LRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV---TKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred CeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 34458899999999999986432 247787764321 223445789999999999999999999
Q ss_pred eEEecCCCCceEEEEEecCCCChhhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 425 GYCRESSPFTRMLVFDYASNGTLYEHLHYGE----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 425 ~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
+++...+ ..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+
T Consensus 84 ~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 84 GVCVSDD--PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEcCCC--ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 9998877 6799999999999999986432 12478999999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh--CCCCCCCCCC
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPCCKDKG 572 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt--G~~p~~~~~~ 572 (658)
||++++++.+||+|||++.................+..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 99999999999999999876432211111111122456999999998899999999999999999998 5667754322
Q ss_pred -cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 573 -NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 573 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
............... ... ...+...+..+.+++.+||+.||++||++.+|++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 EQVIENTGEFFRNQGR--QIY----LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHHhhhhccc--ccc----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111111110000 000 01112234678999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=321.13 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=193.0
Q ss_pred cccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 363 SNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.||+|+||.||+|.+.+ +..+++|.+.... .......|.+|+.++++++|+||+++++++.+.+ ..+
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~ 85 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC---SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL--PRF 85 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CcE
Confidence 3889999999999999864 3456666553221 2233457899999999999999999999998877 569
Q ss_pred EEEEecCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceecc
Q 006178 437 LVFDYASNGTLYEHLHYGER-----CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVD 508 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~D 508 (658)
+||||+++++|.+++..... ..+++..+.+++.||+.||+|||+. +++||||||+||+++.++ .+||+|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEecc
Confidence 99999999999999975431 2589999999999999999999999 999999999999998754 589999
Q ss_pred ccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 509 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
||+++.+.................|+|||++.+..++.++|||||||++|||++ |+.||...... ......... ..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~~~-~~ 239 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFVTGG-GR 239 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC-Cc
Confidence 999886532211111111122346999999998999999999999999999997 99998653321 111111111 00
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
...+...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus 240 ---------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 240 ---------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 01122334678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=324.76 Aligned_cols=256 Identities=21% Similarity=0.328 Sum_probs=197.1
Q ss_pred hhcccccCCCCeeEEEEEecC-CC--eEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GP--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|...+ +. .+++|.+.... .....+.+.+|++++.++ +||||+++++++.+.+ ..+
T Consensus 5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 79 (297)
T cd05089 5 KFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA---SENDHRDFAGELEVLCKLGHHPNIINLLGACENRG--YLY 79 (297)
T ss_pred eeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC---CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC--cce
Confidence 345889999999999999764 32 35666653211 222345789999999999 7999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC
Q 006178 437 LVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 502 (658)
+||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 9999999999999996432 12488999999999999999999999 999999999999999999
Q ss_pred CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHh
Q 006178 503 SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 503 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 581 (658)
.+||+|||++...... .....+..+..|+|||+..+..++.++|||||||++|||+| |..||..... .......
T Consensus 157 ~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--~~~~~~~ 231 (297)
T cd05089 157 ASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--AELYEKL 231 (297)
T ss_pred eEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 9999999987642211 11112223456999999998899999999999999999998 9999965432 1111111
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
... . ....+...+..+.+++.+||+.+|.+||+++++++.|+.+....
T Consensus 232 ~~~-------~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 232 PQG-------Y---RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred hcC-------C---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 110 0 00112234466889999999999999999999999999888654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=327.13 Aligned_cols=258 Identities=21% Similarity=0.255 Sum_probs=199.1
Q ss_pred hhcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 431 (658)
.+.+.||+|+||.||+|+.. ....+|+|.+.... .......+.+|+++++++ +||||+++++++.+.+
T Consensus 15 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 15 VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---TDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 34589999999999999752 23457777764322 123345688999999999 6999999999998776
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
..++||||+++|+|.+++.... ...+++.++.+++.|++.||+|||++ +++||||||+||+
T Consensus 92 --~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 166 (314)
T cd05099 92 --PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL 166 (314)
T ss_pred --ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence 6799999999999999996532 13589999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVD 576 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~ 576 (658)
+++++.+||+|||+++.............+..+..|+|||.+.+..++.++|||||||++|||++ |..||..... ..
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~ 244 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EE 244 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HH
Confidence 99999999999999986543222222222333456999999998899999999999999999999 8899864332 11
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...... ... ....+...+..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 245 ~~~~~~-~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 245 LFKLLR-EGH---------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHHH-cCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 111111 100 0112223345688999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=334.84 Aligned_cols=256 Identities=19% Similarity=0.256 Sum_probs=197.3
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.||+|+||.||+|++. .+..||+|++..... ....+.+.+|++++.++. ||||+++++++...+ .
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~--~ 115 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR---SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG--P 115 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC---hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC--C
Confidence 3489999999999999864 245799998854321 222346889999999997 999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC-----------------------------------------------------------
Q 006178 435 RMLVFDYASNGTLYEHLHYGE----------------------------------------------------------- 455 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~----------------------------------------------------------- 455 (658)
.++||||+++|+|.++++...
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 799999999999999986431
Q ss_pred -------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 456 -------------------------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 456 -------------------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
...+++..+..|+.|++.||+|||+. +++||||||+|||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEE
Confidence 12467888999999999999999998 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDW 577 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~ 577 (658)
++++.+||+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-- 350 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-- 350 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--
Confidence 9999999999999876532221111111223466999999998889999999999999999998 8899864332111
Q ss_pred HHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.......... ...+...+..+.+++.+||+.+|.+||+++||++.|++++
T Consensus 351 ~~~~~~~~~~---------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 FYNAIKRGYR---------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111111000 0112233467889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=315.46 Aligned_cols=254 Identities=22% Similarity=0.247 Sum_probs=187.4
Q ss_pred ccccCCCCeeEEEEEecC---CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.||+|+||.||+|...+ +..+++|++..... ......+.+|+.++++++||||+++++++.+.. ..++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS---VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT--PYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--CcEEEEE
Confidence 368999999999998653 34678887643321 233457889999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+++|+|.+++.... ....++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccC
Confidence 999999999997432 22467788889999999999999999 999999999999999999999999999865332
Q ss_pred cCCCCCCcccccCccccCCcccccC-------CCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEAR-------HLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~-------~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
...........++..|+|||++... .++.++||||||+++|||++ |+.||........ ...... ....
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~---~~~~ 228 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVR---EQQL 228 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhh---cccC
Confidence 2111111122234569999998642 35789999999999999996 9999964332211 111000 0011
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
...++... ....+.+.+++.+|| .+|++|||++||++.|+
T Consensus 229 ~~~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLK---LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccC---CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11122211 112345778999999 68999999999998875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=319.76 Aligned_cols=254 Identities=19% Similarity=0.290 Sum_probs=198.6
Q ss_pred hhhcccccCCCCeeEEEEEecC-C---CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-G---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~---~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
..+.+.||+|+||.||+|.... + ..+|+|.+.... .....++|..|+.++++++||||+++++++.+.. ..
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~ 80 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR--PV 80 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC--ce
Confidence 4456899999999999999763 2 258888764321 2334567999999999999999999999998777 67
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++.++..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 999999999999999975433 589999999999999999999999 9999999999999999999999999998765
Q ss_pred hhcCCCCCC---cccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCccccc
Q 006178 516 LARSEKNPG---TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSY 590 (658)
Q Consensus 516 ~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 590 (658)
......... ..+.....|+|||++.+..++.++|||||||++||+++ |..||...... ...++. .. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~---~~-~~--- 229 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE---QD-YR--- 229 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH---cC-Cc---
Confidence 432211111 11112346899999999999999999999999999887 99998653321 111111 10 00
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
...+.+.+..+.+++.+||+.+|.+||++.+|+..|+++
T Consensus 230 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011223446688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=328.91 Aligned_cols=262 Identities=17% Similarity=0.189 Sum_probs=191.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~l 437 (658)
+.+.||+|+||.||+|+.. ++..||+|++...... ......+.+|++++++++||||+++++++..... ...++
T Consensus 4 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 4 IQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH--VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc--chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 4578999999999999976 5789999987532211 1223468899999999999999999998864331 14799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+. ++|.+++.... .+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 82 v~e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 82 VFELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 999995 69999987554 489999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCCC-CCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc-------
Q 006178 518 RSEKN-PGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE------- 586 (658)
Q Consensus 518 ~~~~~-~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~------- 586 (658)
..... ......++..|+|||++.+ ..++.++|||||||++|||+||+.||...... ....+......+.
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i 235 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRV 235 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 22111 1112235667999999875 67899999999999999999999999654321 1111111110000
Q ss_pred -------ccccccCCcCCCCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 -------VMSYVVDPELKHFS---YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 -------~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.............. +..+..+.+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 236 RNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000000000 1123567899999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=308.26 Aligned_cols=263 Identities=19% Similarity=0.171 Sum_probs=198.6
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC-ccceeeEEecCCC----CceEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN-TGKLLGYCRESSP----FTRML 437 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~----~~~~l 437 (658)
++||+|+||+||+|+.. +|+.||+|++....+. +.......+|+.++++++|+| ||++++++...+. ...++
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEE
Confidence 56999999999999976 6789999999765442 123345679999999999999 9999999987552 24689
Q ss_pred EEEecCCCChhhhhccCCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 438 VFDYASNGTLYEHLHYGER--CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
||||++. +|.+++..... ..++...++.++.||++||+|||++ +|+||||||+|||++++|.+||+|||+|+.+
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 9999965 99999986553 3578889999999999999999999 9999999999999999999999999999976
Q ss_pred hhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcCC--ccccc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLELP--EVMSY 590 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~~--~~~~~ 590 (658)
.-.... .+....+..|+|||++.+. .|++..||||+|||+.||+++++-|.++.+ ..+. +......+ +....
T Consensus 171 ~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 171 SIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred cCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCCccCCCC
Confidence 433222 2233345668999999886 699999999999999999999998876543 1111 11111111 11111
Q ss_pred cc---CC--cCCC------CCHH---HHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 006178 591 VV---DP--ELKH------FSYD---DLKVICEVVNLCVNPDITKRPSMQELCTM--LEGR 635 (658)
Q Consensus 591 ~~---~~--~~~~------~~~~---~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~ 635 (658)
+. +- .... .... ......+++.+|++.+|.+|.|+..++++ +...
T Consensus 248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 11 00 0000 0111 11367899999999999999999999886 5544
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=322.64 Aligned_cols=250 Identities=16% Similarity=0.124 Sum_probs=195.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||++... +++.||+|++...... .......+.+|+.++++++||||+++++++.+.+ ..++||||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 81 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTL 81 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--eEEEEEec
Confidence 478999999999999975 5788999987543321 1223456788999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET- 157 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc-
Confidence 9999999988755444689999999999999999999999 999999999999999999999999999876432111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||........ +...... ......++
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~----------~~~~~~~~ 225 (285)
T cd05605 158 --IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRV----------KEDQEEYS 225 (285)
T ss_pred --cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHh----------hhcccccC
Confidence 1112345679999999988999999999999999999999999975432211 1111111 01111223
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
...+..+.+++.+||+.||++|| +++++++.
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 226 EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 33456688999999999999999 77777554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=327.31 Aligned_cols=242 Identities=19% Similarity=0.177 Sum_probs=187.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+.+|+.++.++ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~E~ 77 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 77 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC--EEEEEEeC
Confidence 46999999999999976 4677888887543221 223345678899998877 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~ 152 (329)
T cd05618 78 VNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 152 (329)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc
Confidence 99999999887543 489999999999999999999999 9999999999999999999999999998753221111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC------CcHHHHHHHhhcCCcccccccCCc
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK------GNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.....++..|+|||++.+..++.++|||||||++|||+||+.||.... .....+....... .
T Consensus 153 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~----------~ 220 (329)
T cd05618 153 --TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE----------K 220 (329)
T ss_pred --cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc----------C
Confidence 112234567999999999999999999999999999999999995311 1111121111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
...++...+..+.+++.+||+.||++||++
T Consensus 221 ~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 221 QIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 011233344667899999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=329.64 Aligned_cols=239 Identities=18% Similarity=0.166 Sum_probs=187.8
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.+ +++.+|+|.+...... .....+.+..|..++..+ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~--~~~iv~Ey 77 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD--RLFFVMEF 77 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC--EEEEEEcC
Confidence 46999999999999986 4678889887543211 122345677888888877 7999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++........
T Consensus 78 ~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~ 152 (320)
T cd05590 78 VNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT 152 (320)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc
Confidence 99999999987554 489999999999999999999999 9999999999999999999999999998753221111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ............ ..+.
T Consensus 153 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--~~~~~~i~~~~~-----------~~~~ 217 (320)
T cd05590 153 --TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILNDEV-----------VYPT 217 (320)
T ss_pred --ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHhcCCC-----------CCCC
Confidence 1122345679999999999999999999999999999999999965432 222222211110 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
..+..+.+++.+||+.||++||++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 218 WLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCC
Confidence 234567899999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=324.29 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=196.2
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|... ++..+|+|.+.... .....+++.+|+.++++++||||+++++++.+.+ ..
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~--~~ 83 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK--PM 83 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc---CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--cc
Confidence 3478999999999999864 35678888764322 2234467899999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcc
Q 006178 436 MLVFDYASNGTLYEHLHYGE--------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~N 495 (658)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 99999999999999996321 12478899999999999999999999 99999999999
Q ss_pred eeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH
Q 006178 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL 574 (658)
Q Consensus 496 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~ 574 (658)
|++++++.+||+|||+++.+..............+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999875432221111111223456999999998899999999999999999998 8888854321
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.+....... ......+...+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 EEVIYYVRD----------GNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHhc----------CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 122221111 11111222345678899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=313.18 Aligned_cols=258 Identities=19% Similarity=0.258 Sum_probs=205.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|... +++.+|+|.+..... ......+.+.+|++++++++|+||+++++++.+.+ ..++||
T Consensus 5 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ 81 (267)
T cd08224 5 KIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM-MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN--ELNIVL 81 (267)
T ss_pred eeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEEE
Confidence 45588999999999999987 788899988754322 22233567899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||+++|+|.+++... ....+++.++..++.|+++||+|||+. +++||||||+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 234589999999999999999999999 999999999999999999999999999876532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.... .....+...|+|||.+.+..++.++|||||||++|||++|+.||................. ...
T Consensus 159 ~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----------~~~ 226 (267)
T cd08224 159 KTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC----------DYP 226 (267)
T ss_pred CCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC----------CCC
Confidence 2211 1112344568999999988899999999999999999999999976554433332221110 111
Q ss_pred CCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 598 HFSY-DDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 598 ~~~~-~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
..+. ..+..+.+++.+||..+|++|||+.+|++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 227 PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1222 34567889999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=316.96 Aligned_cols=254 Identities=23% Similarity=0.305 Sum_probs=191.9
Q ss_pred ccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|+||.||+|...+ ...+|+|++.... .....+.+.+|+.+++.++||||+++++++...+. ..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG-SPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC-CcEEEE
Confidence 468999999999998642 3467888763221 12334578899999999999999999998765443 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+....
T Consensus 77 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 77 PYMKHGDLRNFIRSETH-NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred ecCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 99999999999975433 468888999999999999999999 99999999999999999999999999987653221
Q ss_pred CCC--CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhC-CCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKN--PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISG-RPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... .......+..|+|||.+.+..++.++|||||||++|||++| .+||.... ........... ..
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~~~----------~~ 220 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYLLQG----------RR 220 (262)
T ss_pred ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhcC----------CC
Confidence 111 11122234569999999888999999999999999999995 55664332 11222111111 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...+...+..+.+++.+||+.+|++||++.||++.|+++..
T Consensus 221 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 01112234568899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=328.62 Aligned_cols=246 Identities=20% Similarity=0.180 Sum_probs=187.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHH-HHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|++. +++.+|+|.+....... ......+..|.. +++.++||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLDY 77 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh-hhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC--eEEEEEeC
Confidence 46999999999999986 45678888875432211 112234444444 567889999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 78 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~- 151 (325)
T cd05602 78 INGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG- 151 (325)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-
Confidence 99999999997544 478889999999999999999999 999999999999999999999999999875422211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
......++..|+|||++.+..++.++|||||||++|||++|+.||..... .+........+. ..++
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~-----------~~~~ 217 (325)
T cd05602 152 -TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNKPL-----------QLKP 217 (325)
T ss_pred -CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--HHHHHHHHhCCc-----------CCCC
Confidence 11222345679999999999999999999999999999999999965432 222222211110 1112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
..+..+.+++.+|++.||.+||++.+.+..+
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 2345678999999999999999987554433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=317.87 Aligned_cols=252 Identities=20% Similarity=0.319 Sum_probs=199.9
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
..+.+.||+|+||.||+|..+++..+|+|.+..... ..+++.+|+.++++++|+||+++++++.... ..++||
T Consensus 8 ~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~ 80 (261)
T cd05034 8 LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE--PIYIVT 80 (261)
T ss_pred eeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCC--ceEEEE
Confidence 344589999999999999988888899988753222 2356889999999999999999999998766 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.......+++.++..++.|++.|++|||++ +++|+||||+||++++++.+||+|||.+..+....
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 999999999999876545699999999999999999999999 99999999999999999999999999987653211
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. ...........|+|||.+.+..++.++||||||+++||++| |+.||...... ......... .. ..
T Consensus 158 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~---~~-------~~ 224 (261)
T cd05034 158 Y-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERG---YR-------MP 224 (261)
T ss_pred h-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC---CC-------CC
Confidence 1 11111112346899999998889999999999999999999 99999654321 111111111 00 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.+...+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 112224668899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=315.95 Aligned_cols=247 Identities=22% Similarity=0.335 Sum_probs=198.9
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|... ++.+|+|++..... ..+++.+|+.++++++|+||+++++++.+.+ ..++|||
T Consensus 9 ~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 80 (256)
T cd05039 9 KLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN--PLYIVTE 80 (256)
T ss_pred cceeeeecCCCceEEEEEec-CcEEEEEEeccchh-----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC--CeEEEEE
Confidence 45689999999999999875 68899998743322 3567899999999999999999999998766 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.......+++..+..++.|++.||.|||++ +++||||||+||++++++.+||+|||.++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 99999999999866544699999999999999999999999 999999999999999999999999999876532111
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.......|+|||++.+..++.++||||||+++||+++ |+.||...... ......... .. ...
T Consensus 158 -----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~-~~---------~~~ 220 (256)
T cd05039 158 -----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEKG-YR---------MEA 220 (256)
T ss_pred -----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhcC-CC---------CCC
Confidence 2223456899999998899999999999999999998 99998644321 111111110 00 011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
+...+..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 222346788999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=322.02 Aligned_cols=257 Identities=19% Similarity=0.252 Sum_probs=196.9
Q ss_pred hcccccCCCCeeEEEEEec-----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
..+.||+|+||.||++++. ++..+|+|.+.... .....+.+.+|++++++++||||+++++++.+.+....+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 3478999999999999842 46788998874332 123345789999999999999999999999876434679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++++|.+++..... .+++.++..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++.+.
T Consensus 85 lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKN-KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence 99999999999999965432 589999999999999999999999 99999999999999999999999999988654
Q ss_pred hcCCCCCC-cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-------------HHHHHHhh
Q 006178 517 ARSEKNPG-TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-------------VDWAKDYL 582 (658)
Q Consensus 517 ~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-------------~~~~~~~~ 582 (658)
........ ....+...|+|||++.+..++.++|||||||++|||+|++.|........ ..+... .
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV-L 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH-H
Confidence 32221111 11123346899999988889999999999999999999887653211100 001100 0
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
. .......+...+..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 240 ~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 E---------EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred H---------cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0 0001111223456789999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=327.08 Aligned_cols=247 Identities=18% Similarity=0.164 Sum_probs=190.9
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.+|+|.+..... ......+.+.+|..++.++ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~--~~~lv~e~ 77 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV-NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES--RLFFVIEF 77 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC--EEEEEEeC
Confidence 46999999999999976 567888888754321 1222345688999999998 7999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 78 ~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~- 151 (329)
T cd05588 78 VSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD- 151 (329)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCC-
Confidence 99999999886543 499999999999999999999999 999999999999999999999999999874321111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC------CcHHHHHHHhhcCCcccccccCCc
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK------GNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
......++..|+|||++.+..++.++|||||||++|||+||+.||.... .....+....... .
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------~- 220 (329)
T cd05588 152 -TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE---------K- 220 (329)
T ss_pred -ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---------C-
Confidence 1112234567999999999999999999999999999999999996321 1111121111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPS------MQELCT 630 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs------~~evl~ 630 (658)
....+...+..+.+++.+||+.||.+||+ +.|+++
T Consensus 221 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 221 QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 01122233456889999999999999997 566654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=314.46 Aligned_cols=258 Identities=19% Similarity=0.255 Sum_probs=203.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|++..... ........+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 6 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 82 (267)
T cd08228 6 IEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN--ELNIVLE 82 (267)
T ss_pred eeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC--eEEEEEE
Confidence 4588999999999999975 678899987754322 22334567889999999999999999999998876 7799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|+++|+|.+++... ....+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 99999999988532 223589999999999999999999999 9999999999999999999999999988765322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
... .....+...|+|||.+.+..++.++||||||+++|||+||+.||.........+....... . .+. .
T Consensus 160 ~~~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~-~------~~~--~ 228 (267)
T cd08228 160 TTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC-D------YPP--L 228 (267)
T ss_pred hHH--HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC-C------CCC--C
Confidence 111 1112344569999999888899999999999999999999999975544433333222111 0 011 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.....+..+.+++.+||+.+|++||++.+|++.++++.
T Consensus 229 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 229 PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 12234567889999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=320.59 Aligned_cols=247 Identities=19% Similarity=0.125 Sum_probs=191.7
Q ss_pred ccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||+|+||+||++... +++.+|+|++...... .....+.+..|++++++++|+||+++.+++.... ..++||||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT--DLCLVMTIMNG 77 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC--eEEEEEeCCCC
Confidence 799999999999976 6788999987543321 1222356788999999999999999999998877 78999999999
Q ss_pred CChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 445 GTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 445 gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++..+.......
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 154 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT 154 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccc
Confidence 9999887532 234589999999999999999999999 99999999999999999999999999987653322111
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH--HHHHHHhhcCCcccccccCCcCCCCC
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--VDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
....++..|+|||.+.+..++.++|||||||++|||++|+.||....... ......... .. ...+
T Consensus 155 --~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----------~~-~~~~ 221 (280)
T cd05608 155 --KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN----------DS-VTYP 221 (280)
T ss_pred --cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc----------cC-CCCc
Confidence 11234567999999999999999999999999999999999997543221 111111111 00 1123
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
...+..+.+++.+||+.||++|| +++++++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 33456788999999999999999 66666653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=315.25 Aligned_cols=250 Identities=25% Similarity=0.365 Sum_probs=199.7
Q ss_pred ccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|+||.||+|.... +..+++|.+...... ...+.+.+|++++++++|+||+++++++.+.. ..++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---EERKDFLKEARVMKKLGHPNVVRLLGVCTEEE--PLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---hHHHHHHHHHHHHhhcCCCChheeeeeecCCC--ceEEEE
Confidence 469999999999999864 678888887543322 13567899999999999999999999998866 789999
Q ss_pred EecCCCChhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 440 DYASNGTLYEHLHYGE-------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
||+++++|.+++.... ...+++..+..++.|+++||+|||++ +++||||||+||++++++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 9999999999998642 24699999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
....................|+|||.+....++.++||||+|+++|||++ |..||..... .........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~-------- 222 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK-------- 222 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc--------
Confidence 87654322122222334567999999988899999999999999999999 6999865432 111111111
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
......+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 223 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 --GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111223334567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=313.09 Aligned_cols=254 Identities=19% Similarity=0.229 Sum_probs=183.5
Q ss_pred ccccCCCCeeEEEEEecCCCe---EEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPE---IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~---vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.||+|+||.||+|...++.. +++|.+.. .......+.+.+|+.+++.++||||+++++++.+.. ..++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKA---NASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI--PYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecC---CCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC--ccEEEEe
Confidence 369999999999998654443 33443322 222234568999999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|+++|+|.+++++.. ....++..+..++.||++||+|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~ 152 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE 152 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcc
Confidence 999999999997542 23467778889999999999999999 9999999999999999999999999987542211
Q ss_pred CCCCCCcccccCccccCCccccc-------CCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 519 SEKNPGTLGSQGAICILPSSLEA-------RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
..........++..|+|||++.. ..++.++|||||||++|||++ |..||..... .+........ ....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~--~~~~ 228 (268)
T cd05086 153 DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--REVLNHVIKD--QQVK 228 (268)
T ss_pred hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHhh--cccc
Confidence 11111112233466999998743 345789999999999999997 4677754322 1111111111 1111
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
..++... ....+.+.+++..|| .+|++||+++||++.|.
T Consensus 229 ~~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQLE---LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCccC---CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2222222 123355778999999 67999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=317.72 Aligned_cols=254 Identities=20% Similarity=0.303 Sum_probs=197.3
Q ss_pred hhcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|+... +..+|+|.+.... .....+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 81 (267)
T cd05066 7 KIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK--PVM 81 (267)
T ss_pred EeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--ccE
Confidence 345899999999999998742 2367777764322 1233567899999999999999999999998777 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++++|.+++..... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.+.
T Consensus 82 lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDG-QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 99999999999999975543 589999999999999999999999 99999999999999999999999999988654
Q ss_pred hcCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
....... ...+.....|++||++.+..++.++||||||+++||+++ |..||...... +........ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~-~~------- 227 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEG-YR------- 227 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCC-Cc-------
Confidence 3221111 111222346899999998899999999999999999887 99998654321 111111111 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
...+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 228 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 --LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011122345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=326.12 Aligned_cols=245 Identities=18% Similarity=0.163 Sum_probs=191.5
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
++||+|+||.||+|+..+ ++.+|+|.+...... .....+.+..|.+++..+ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~--~~~lv~E~ 77 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD--RLFFVMEY 77 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--eEEEEEeC
Confidence 469999999999999864 678899987543211 222345677899999876 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 152 (321)
T cd05591 78 VNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT 152 (321)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcc
Confidence 99999999987554 489999999999999999999999 9999999999999999999999999998753222111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||++.+..++.++|||||||++|||+||+.||..... ............ ..+.
T Consensus 153 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~~-----------~~p~ 217 (321)
T cd05591 153 --TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--DDLFESILHDDV-----------LYPV 217 (321)
T ss_pred --ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCC-----------CCCC
Confidence 1122345679999999999999999999999999999999999975432 122222211110 1112
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRP-------SMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RP-------s~~evl~~ 631 (658)
..+.++.+++.+||+.||++|| ++.++++.
T Consensus 218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 2345678999999999999999 77777654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=316.07 Aligned_cols=251 Identities=15% Similarity=0.260 Sum_probs=198.9
Q ss_pred HhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
...+.+.||+|+||.||++...++..+++|.+.... ...+.+.+|++++++++|+||+++++++.+ . ..+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--~~~~v 78 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYII 78 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C--CeEEE
Confidence 344568999999999999998887888888764322 124578899999999999999999999877 4 56999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++.......+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999999999865555689999999999999999999998 9999999999999999999999999988765322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. ........+..|+|||++....++.++|||||||++||++| |+.||...... ...+... . ...
T Consensus 156 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~---~-~~~-------- 222 (260)
T cd05073 156 EY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER---G-YRM-------- 222 (260)
T ss_pred Cc-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC---C-CCC--------
Confidence 11 11111223456999999998889999999999999999999 89998654321 1111111 0 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
..+...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 223 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 -PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1112334568899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=327.38 Aligned_cols=245 Identities=20% Similarity=0.180 Sum_probs=192.0
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|++.. +..+|+|.+...... .......+.+|.+++..+ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 77 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD--RLFFVMEY 77 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 469999999999999864 678889887543211 122345677899999888 7999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 152 (318)
T cd05570 78 VNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT 152 (318)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc
Confidence 99999999987554 489999999999999999999999 9999999999999999999999999988643211111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||++.+..++.++|||||||++|||+||+.||..... ............ .++.
T Consensus 153 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~~i~~~~~-----------~~~~ 217 (318)
T cd05570 153 --TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQSILEDEV-----------RYPR 217 (318)
T ss_pred --ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHHHHHcCCC-----------CCCC
Confidence 1122345679999999999999999999999999999999999965432 122111111100 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSM-----QELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~-----~evl~~ 631 (658)
..+..+.+++.+||+.||++||++ .++++.
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 334668899999999999999999 777653
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=312.84 Aligned_cols=250 Identities=22% Similarity=0.279 Sum_probs=196.4
Q ss_pred ccccCCCCeeEEEEEecC--CC--eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG--GP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|++|.||+|.+.+ ++ .+|+|.+...... ...+.+.+|+.++++++||||+++++++.+ . ..++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H--PLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--eEEEEE
Confidence 468999999999999753 22 5788877443321 455689999999999999999999999987 4 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.+....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~ 151 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE 151 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccc
Confidence 999999999999865434689999999999999999999999 99999999999999999999999999988764322
Q ss_pred CC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.. ........+..|+|||++.+..++.++|||||||++|||+| |+.||...... +.......... ..
T Consensus 152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~---------~~ 220 (257)
T cd05040 152 DHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKEGE---------RL 220 (257)
T ss_pred cceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhcCC---------cC
Confidence 11 11112233456999999998899999999999999999999 99998643221 11111111100 01
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
..+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 112234567889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=329.05 Aligned_cols=240 Identities=19% Similarity=0.203 Sum_probs=185.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHH-HHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
++||+|+||.||+|+.. ++..+|+|.+...... .......+.+|.. +++.++||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e~ 77 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL-KKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE--KLYFVLDY 77 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--EEEEEEcC
Confidence 46999999999999986 5678888887543221 1222344555554 578889999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+.+.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 151 (321)
T cd05603 78 VNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE- 151 (321)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC-
Confidence 99999998887543 488999999999999999999999 999999999999999999999999999875322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
......++..|+|||.+.+..++.++|||||||++|||++|+.||...+. ..........+ ...+.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~-----------~~~~~ 217 (321)
T cd05603 152 -TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--SQMYDNILHKP-----------LQLPG 217 (321)
T ss_pred -ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--HHHHHHHhcCC-----------CCCCC
Confidence 11222345679999999988999999999999999999999999975432 22222222111 01222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQ 626 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~ 626 (658)
.....+.+++.+||+.||.+||++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 2345688999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=324.67 Aligned_cols=263 Identities=16% Similarity=0.173 Sum_probs=193.2
Q ss_pred hcccccCC--CCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 362 FSNIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 362 f~~~lG~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.++||+| +|++||+++.+ +|+.||+|++..... .....+.+.+|+++++.++||||+++++++..++ ..++|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--~~~lv 77 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC--TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVV 77 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc--cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC--EEEEE
Confidence 34689999 78899999975 678899998754322 1233456788999999999999999999998887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++..+....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINH 154 (327)
T ss_pred EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence 9999999999999765444689999999999999999999999 9999999999999999999999999865443211
Q ss_pred CCCC-----CCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc--
Q 006178 519 SEKN-----PGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS-- 589 (658)
Q Consensus 519 ~~~~-----~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-- 589 (658)
.... .......+..|+|||++.+ ..++.++|||||||++|||++|+.||.................+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccccc
Confidence 1100 0111223456999999876 468999999999999999999999996433211111110000000000
Q ss_pred -------------cccC------------------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 -------------YVVD------------------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 -------------~~~~------------------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+ .............+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0000 00001122345678899999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=325.95 Aligned_cols=243 Identities=17% Similarity=0.201 Sum_probs=187.9
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|++.+ ++.+|+|.+...... .....+.+..|..++... +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~ey 77 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE--NLFFVMEY 77 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC--EEEEEEeC
Confidence 469999999999999864 678899887543211 112234566788888765 9999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 152 (316)
T cd05619 78 LNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK 152 (316)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc
Confidence 99999999997543 489999999999999999999999 9999999999999999999999999998643211111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||++.+..++.++|||||||++|||++|+.||..... .......... .+ .++.
T Consensus 153 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i~~~--------~~---~~~~ 217 (316)
T cd05619 153 --TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSIRMD--------NP---CYPR 217 (316)
T ss_pred --eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC--------CC---CCCc
Confidence 1122345679999999999999999999999999999999999965432 1111111100 00 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQ-ELC 629 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~-evl 629 (658)
.....+.+++.+||+.||++||++. ++.
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 2345678999999999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=326.21 Aligned_cols=243 Identities=19% Similarity=0.193 Sum_probs=188.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|++. ++..+|+|.+...... .....+.+..|..++... +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 77 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE--HLFFVMEF 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC--EEEEEECC
Confidence 46999999999999986 5678899887543211 112234567788888765 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++..+. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 78 ~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 151 (316)
T cd05620 78 LNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN- 151 (316)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-
Confidence 99999999987543 489999999999999999999999 999999999999999999999999998864321111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
......++..|+|||++.+..++.++|||||||++|||++|+.||...... .......... ...+.
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~~-----------~~~~~ 217 (316)
T cd05620 152 -RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVDT-----------PHYPR 217 (316)
T ss_pred -ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC-----------CCCCC
Confidence 112223456799999999999999999999999999999999999654321 1111111110 11122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQ-ELC 629 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~-evl 629 (658)
....++.+++.+||+.||++||++. ++.
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 2345678999999999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=320.32 Aligned_cols=260 Identities=20% Similarity=0.287 Sum_probs=196.1
Q ss_pred hhcccccCCCCeeEEEEEecCC-----------------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccce
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGG-----------------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~-----------------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 423 (658)
.+.+.||+|+||.||+|+..+. ..+|+|.+.... .....+.+.+|++++++++||||+++
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 8 NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred cccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3458899999999999986532 346777764322 12345678999999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGE---------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
++++...+ ..+++|||+++++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+
T Consensus 85 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 85 LGVCTVDP--PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEecCC--CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 99998876 6799999999999999987543 12589999999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh--CCCCCCCCCC
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPCCKDKG 572 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt--G~~p~~~~~~ 572 (658)
||++++++.+||+|||+++................+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999876432221111112223456999999988899999999999999999998 6778754322
Q ss_pred c-HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 573 N-LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 573 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
. ............. .......+...+.++.+++.+||+.||++|||+.||++.|++
T Consensus 240 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 QQVIENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHHHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 1 1111111111000 000011122344678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=330.13 Aligned_cols=240 Identities=17% Similarity=0.146 Sum_probs=189.2
Q ss_pred ccccCCCCeeEEEEEe----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|+||.||+++. .+++.+|+|.+...... ......+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK--VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG--KLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--EEEEEE
Confidence 4799999999999885 35788999988543211 223345778999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 78 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 152 (318)
T cd05582 78 DFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152 (318)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence 9999999999997543 489999999999999999999999 99999999999999999999999999987643221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ........... ...
T Consensus 153 ~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~~i~~~~-----------~~~ 217 (318)
T cd05582 153 KK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--KETMTMILKAK-----------LGM 217 (318)
T ss_pred Cc--eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--HHHHHHHHcCC-----------CCC
Confidence 11 1122345679999999988899999999999999999999999965432 11111111110 012
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQE 627 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~e 627 (658)
+...+..+.+++.+||+.||++||++.+
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 2233456789999999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=318.01 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=193.6
Q ss_pred ccccCCCCeeEEEEEecC-------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 364 NIIGSSPDSLVYKGTMKG-------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.||+|+||.||+|+..+ +..+++|.+..... ......+.+|+.++++++||||+++++++...+ ..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT---DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE--PQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc---hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC--CeE
Confidence 368999999999998753 24677777643221 123457889999999999999999999998777 679
Q ss_pred EEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-----Ccee
Q 006178 437 LVFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-----SPKL 506 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-----~~kl 506 (658)
+||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+. +++|+||||+||+++.+. .+||
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997432 23488999999999999999999998 999999999999999877 8999
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCC
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 585 (658)
+|||+++.+..............+..|+|||++.+..++.++|||||||++|||+| |+.||...... +..... ...
T Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~-~~~ 229 (269)
T cd05044 153 GDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHV-TAG 229 (269)
T ss_pred CCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHH-hcC
Confidence 99999876533221111111223456999999999999999999999999999998 99998643321 111111 000
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.....+...+..+.+++.+||+.+|++||++.+|++.|++
T Consensus 230 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 230 ---------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ---------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0011223345678899999999999999999999999864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=311.85 Aligned_cols=259 Identities=20% Similarity=0.256 Sum_probs=203.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|... +++.+++|++..... ......+++.+|+.+++.++||||+++++++.+.+ ..+++|
T Consensus 5 ~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~ 81 (267)
T cd08229 5 RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVL 81 (267)
T ss_pred hhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh-hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC--eEEEEE
Confidence 34578999999999999964 788999998754332 22334467889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||+++++|.+++... ....+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999988632 234589999999999999999999999 999999999999999999999999998876532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
..... ....+...|+|||.+.+..++.++||||||+++|||++|..||.........+....... ..+..
T Consensus 159 ~~~~~--~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~- 228 (267)
T cd08229 159 KTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-------DYPPL- 228 (267)
T ss_pred CCccc--ccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-------CCCCC-
Confidence 22111 112344568999999888899999999999999999999999965443332222221110 01111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.....+..+.+++.+||+.||++|||+.+|++.++++.
T Consensus 229 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 229 -PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 11234567889999999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=312.03 Aligned_cols=250 Identities=21% Similarity=0.269 Sum_probs=196.6
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecC
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~ 443 (658)
++||+|+||.||++...+++.+++|++...... ...+.+.+|++++++++|+||+++++++.+.. ..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP---DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ--PIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH---HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--CeEEEEEcCC
Confidence 469999999999999887889999977443221 34567899999999999999999999998877 7799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCC
Q 006178 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP 523 (658)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 523 (658)
+++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..........
T Consensus 76 ~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 151 (251)
T cd05041 76 GGSLLTFLRKKKN-RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS 151 (251)
T ss_pred CCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec
Confidence 9999999975433 589999999999999999999999 999999999999999999999999999876432111111
Q ss_pred CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 524 ~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.........|+|||.+.++.++.++|||||||++|||+| |..||...... ......... . ....+..
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~-~---------~~~~~~~ 219 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESG-Y---------RMPAPQL 219 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcC-C---------CCCCCcc
Confidence 111122345899999988899999999999999999999 88888644321 111111100 0 0011223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.+..+.+++.+||+.+|.+|||+.|+++.|+.
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 45678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=316.36 Aligned_cols=255 Identities=20% Similarity=0.264 Sum_probs=198.5
Q ss_pred hhhcccccCCCCeeEEEEEecCC----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
..+.+.||+|+||.||+|.+.+. ..+++|....... ....+.+.+|+.++++++||||+++++++.+. ..
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~ 81 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN---PV 81 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC---Cc
Confidence 44568999999999999987542 3577776643221 23456789999999999999999999998754 45
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKY-SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 899999999999999975433 589999999999999999999998 9999999999999999999999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 593 (658)
...... ..........|+|||.+....++.++||||||+++||+++ |..||...... ...... .. ...
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~---~~-~~~----- 227 (270)
T cd05056 158 EDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE---NG-ERL----- 227 (270)
T ss_pred ccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---cC-CcC-----
Confidence 432111 1112223346999999988889999999999999999996 99999654321 111111 00 000
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
..+...+..+.+++.+|+..+|.+|||+.++++.|+++.+.
T Consensus 228 ----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 ----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11223446788999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=332.53 Aligned_cols=253 Identities=14% Similarity=0.127 Sum_probs=188.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|.+. .++.||+|+.. .+.+.+|++++++++||||+++++++.... ..++|
T Consensus 94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~lv 161 (391)
T PHA03212 94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTYNK--FTCLI 161 (391)
T ss_pred cEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC--eeEEE
Confidence 334589999999999999976 56778887531 124678999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
||++. ++|.+++.... .+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 162 ~e~~~-~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 162 LPRYK-TDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred EecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 99995 69999887544 489999999999999999999999 9999999999999999999999999998653221
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC---------cHHHHHHHhhcCCccc-
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG---------NLVDWAKDYLELPEVM- 588 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~---------~~~~~~~~~~~~~~~~- 588 (658)
.. .......++..|+|||++.+..++.++|||||||++|||+||+.||..... .+..........+...
T Consensus 236 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 236 NA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred cc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 11 111122356678999999999999999999999999999999988753211 0111111100000000
Q ss_pred -------ccc---------cCCcCCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 -------SYV---------VDPELKHF---SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 -------~~~---------~~~~~~~~---~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... ..+..+.. ....+.++.+|+.+||+.||++|||++|+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 00000000 01245678899999999999999999999863
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=327.12 Aligned_cols=245 Identities=20% Similarity=0.197 Sum_probs=188.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHH-HHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +|+.+|+|.+..+... .....+.+..|.. +++.++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE--KLYFVLDF 77 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC--EEEEEEcC
Confidence 46999999999999975 5788999987543221 1223345556655 467789999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 78 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 151 (325)
T cd05604 78 VNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD- 151 (325)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-
Confidence 99999999887544 489999999999999999999999 999999999999999999999999999875322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .+.......... . ..+
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~~~~~~~----~-------~~~ 217 (325)
T cd05604 152 -TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV--AEMYDNILHKPL----V-------LRP 217 (325)
T ss_pred -CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH--HHHHHHHHcCCc----c-------CCC
Confidence 11222345679999999999999999999999999999999999975432 222222221110 0 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+|++.+|++||++.+.++.
T Consensus 218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 218 GASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred CCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 233567799999999999999988644433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=330.56 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=191.0
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|+.. +++.+|+|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~--~~~lv~E~ 82 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-NRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMDY 82 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC--EEEEEEec
Confidence 478999999999999975 5678899887543321 2233457899999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 83 ~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 83 IPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 99999999997554 489999999999999999999999 9999999999999999999999999997643110000
Q ss_pred ---------------------------------------------CCCcccccCccccCCcccccCCCCccccchhhHHH
Q 006178 522 ---------------------------------------------NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVL 556 (658)
Q Consensus 522 ---------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvv 556 (658)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00011235677999999998899999999999999
Q ss_pred HHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHH--ccCCCCCCCCCHHHHHHH
Q 006178 557 LLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNL--CVNPDITKRPSMQELCTM 631 (658)
Q Consensus 557 l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~--cl~~dP~~RPs~~evl~~ 631 (658)
+|||+||+.||.......... ........ ..-+.. ...+.++.+++.+ |+..+|..||++.|+++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~--~i~~~~~~---~~~~~~----~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQL--KVINWENT---LHIPPQ----VKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHH--HHHccccc---cCCCCC----CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999999997544221111 11110000 000111 1123556788877 556666779999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=304.45 Aligned_cols=245 Identities=16% Similarity=0.264 Sum_probs=201.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
..+||+|+||.||||.++ .|..+|+|++....+ .+++.+|+.++++++.|+||++||.|.... ..++||||
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD------LQEIIKEISIMQQC~S~yVVKYYGSYFK~s--DLWIVMEY 109 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD------LQEIIKEISIMQQCKSKYVVKYYGSYFKHS--DLWIVMEY 109 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCccch------HHHHHHHHHHHHHcCCchhhhhhhhhccCC--ceEeehhh
Confidence 378999999999999987 578888988854332 457899999999999999999999776666 68999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|..|+..+.++.+.+ ++++.++..++++.++||+|||.. .-+|||||..|||++.+|.+||+|||.|..+.+....
T Consensus 110 CGAGSiSDI~R~R~K-~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK 185 (502)
T KOG0574|consen 110 CGAGSISDIMRARRK-PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK 185 (502)
T ss_pred cCCCcHHHHHHHhcC-CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence 999999999985544 799999999999999999999998 8999999999999999999999999999877544332
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
. ....++++|||||++..-.|+.++||||+|++..||..|++||.+-..- +..+- +...-.|.. ..|+
T Consensus 186 R--NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-----RAIFM----IPT~PPPTF-~KPE 253 (502)
T KOG0574|consen 186 R--NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-----RAIFM----IPTKPPPTF-KKPE 253 (502)
T ss_pred h--CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-----ceeEe----ccCCCCCCC-CChH
Confidence 2 2345678999999999999999999999999999999999998542110 00000 000011111 2467
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.++.+++++||...|++|-|+.++++.
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 788999999999999999999999988865
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=327.48 Aligned_cols=246 Identities=18% Similarity=0.214 Sum_probs=199.5
Q ss_pred ccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
-+||+|.||+||.|++.++ ..+|||.+..+... ..+-+..|+.+.++++|.|||+++|.+.+.+ +.-|.||-+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr----~~QPLhEEIaLH~~LrHkNIVrYLGs~senG--f~kIFMEqV 654 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR----EVQPLHEEIALHSTLRHKNIVRYLGSVSENG--FFKIFMEQV 654 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccch----hhccHHHHHHHHHHHhhHhHHHHhhccCCCC--eEEEEeecC
Confidence 3799999999999998764 47888887544422 2345778999999999999999999998877 778999999
Q ss_pred CCCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceeccccchhhhhhcC
Q 006178 443 SNGTLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l--~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~ 519 (658)
+||+|.++++..=+ ++ ++.+.-.+.+||++||.|||++ .|||||||-+|||++ -.|.+||+|||.++.+..-
T Consensus 655 PGGSLSsLLrskWG-PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi- 729 (1226)
T KOG4279|consen 655 PGGSLSSLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI- 729 (1226)
T ss_pred CCCcHHHHHHhccC-CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC-
Confidence 99999999985432 45 7888899999999999999999 999999999999997 4689999999999887533
Q ss_pred CCCCCcccccCccccCCcccccC--CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEAR--HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~--~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.......+++..|||||++..+ .|+.++|||||||++.||.||++||...+.....+.+-. .-..-.
T Consensus 730 -nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG----------myKvHP 798 (1226)
T KOG4279|consen 730 -NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG----------MYKVHP 798 (1226)
T ss_pred -CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc----------ceecCC
Confidence 2333345567789999999865 489999999999999999999999976544332221110 011123
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.|.+.+.+...+|.+|+.+||.+||++.++++.
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 5678888999999999999999999999999864
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=316.67 Aligned_cols=256 Identities=19% Similarity=0.223 Sum_probs=198.1
Q ss_pred hcccccCCCCeeEEEEEecC-CC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|..++ +. .+|+|....... ......+.+|+.++++++||||+++++++.. . ..+
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~ 84 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS---PKANKEILDEAYVMASVDHPHVVRLLGICLS-S--QVQ 84 (279)
T ss_pred EcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C--ceE
Confidence 44789999999999999753 32 467776532221 2344678899999999999999999999987 3 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.+.
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 99999999999999976543 489999999999999999999998 99999999999999999999999999998764
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.............+..|++||.+....++.++||||||+++||++| |+.||..... .++....... ..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~-~~-------- 229 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLEKG-ER-------- 229 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhCC-CC--------
Confidence 3222111111222356999999988899999999999999999999 9999965432 1221111110 00
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
...+......+.+++.+||..+|++||++.++++.|+++....
T Consensus 230 -~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 230 -LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 0111223356789999999999999999999999999886543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=312.25 Aligned_cols=251 Identities=17% Similarity=0.227 Sum_probs=196.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|++|.||+|... ++..+++|.+...... ......+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 84 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE--TLSIFME 84 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC--eEEEEEE
Confidence 478999999999999975 5788999887544321 11223457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 85 YMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred ECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 999999999987543 488999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCC-cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPG-TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~-~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.... ....+...|+|||.+.+..++.++||||||+++|||++|+.||........ . ...... ......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~-~~~~~~---------~~~~~~ 228 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA-I-FKIATQ---------PTNPQL 228 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH-H-HHHhcc---------CCCCCC
Confidence 1111 112234579999999998899999999999999999999999864322111 1 111110 011122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.+|.+|||+.|+++.
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 229 PSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 33345668899999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=330.41 Aligned_cols=249 Identities=19% Similarity=0.307 Sum_probs=205.8
Q ss_pred cccccCCCCeeEEEEEecC--C--CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.++||+|.||.|++|.+.. | -.||||.+...... ....+|++|+.+|.+++|||++++||+..+. -..+|
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~---~~mddflrEas~M~~L~H~hliRLyGvVl~q---p~mMV 188 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN---AIMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PAMMV 188 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc---hhHHHHHHHHHHHHhccCcceeEEeeeeccc---hhhHH
Confidence 3789999999999999863 3 36888887543322 2567899999999999999999999999874 35899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
||+++.|+|.+.|++..+..+.......++.|||.||.||.++ ++|||||...|+|+-..-.+||+|||+.+.+...
T Consensus 189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 9999999999999985566789999999999999999999999 9999999999999999889999999999987654
Q ss_pred CCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 519 SEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 519 ~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.+... .......+.|.|||.+....++.++|||+|||++|||+| |+.||.+-.... ++..+-+.+.
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q------------IL~~iD~~er 333 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ------------ILKNIDAGER 333 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH------------HHHhcccccc
Confidence 43322 122234677999999999999999999999999999999 789986543321 1222223344
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
...+..+++.++++++.||..+|++|||+.+|.+.+
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 456778899999999999999999999999998544
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=318.56 Aligned_cols=260 Identities=19% Similarity=0.266 Sum_probs=193.6
Q ss_pred hhcccccCCCCeeEEEEEecC-----------------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccce
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-----------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-----------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 423 (658)
.+.+.||+|+||.||++...+ ...+|+|.+.... .....+++.+|++++++++|+||+++
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 8 TFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred eeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 455889999999999986432 2357777764321 22345678999999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCCC---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGER---------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
++++...+ ..++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+
T Consensus 85 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 85 LAVCITSD--PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred EEEEecCC--ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 99998877 67999999999999999875321 2478889999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh--CCCCCCCCCC
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPCCKDKG 572 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt--G~~p~~~~~~ 572 (658)
||++++++.+||+|||+++.+..............+..|++||...++.++.++|||||||++|||+| |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 99999999999999999876532211111111122356899999888899999999999999999998 6788754322
Q ss_pred c-HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 573 N-LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 573 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
. ............. .... ...+..++..+.+++.+||+.||++||++.||++.|++
T Consensus 240 ~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVIENTGEFFRDQG--RQVY----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHHHhhcc--cccc----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 1111111110000 0000 01122344678899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=328.20 Aligned_cols=252 Identities=16% Similarity=0.151 Sum_probs=193.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.+ ..++||
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~--~~~lv~ 122 (370)
T cd05596 46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-MIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK--YLYMVM 122 (370)
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-hhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEEE
Confidence 34489999999999999986 56788888874322 112223345789999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++.......
T Consensus 123 Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 123 EYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred cCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999998753 478899999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCCcccccCccccCCcccccC----CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 520 EKNPGTLGSQGAICILPSSLEAR----HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~----~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
. .......++..|+|||.+.+. .++.++|||||||++|||+||+.||...... ............ ...+.
T Consensus 197 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~~---~~~~~ 270 (370)
T cd05596 197 M-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMDHKNS---LTFPD 270 (370)
T ss_pred c-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--HHHHHHHcCCCc---CCCCC
Confidence 1 111223356779999998653 4789999999999999999999999754321 111111111110 00011
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
....+..+.+++.+|++.+|.+ ||++.|+++.
T Consensus 271 ----~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 271 ----DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1123466889999999999988 9999999765
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=325.49 Aligned_cols=246 Identities=16% Similarity=0.169 Sum_probs=189.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHH---HhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL---ARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l---~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|... +++.||+|.+...... .....+.+.+|++++ ++++||||+++++++.+.+ ..++
T Consensus 3 i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~--~~~l 79 (324)
T cd05589 3 CLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED--HVCF 79 (324)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC--EEEE
Confidence 3478999999999999976 5788999987543211 122334566776655 5668999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|..+++.. .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 v~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 80 VMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 99999999999888643 589999999999999999999999 999999999999999999999999998865322
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.... .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............
T Consensus 154 ~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~--~~~~~~i~~~~~----------- 218 (324)
T cd05589 154 FGDR--TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE--EEVFDSIVNDEV----------- 218 (324)
T ss_pred CCCc--ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC-----------
Confidence 1111 1122345679999999999999999999999999999999999965432 112111111100
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
.++...+..+.+++.+||+.||.+|| ++.++++.
T Consensus 219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 219 RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 12223346678999999999999999 46666553
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=329.79 Aligned_cols=252 Identities=17% Similarity=0.162 Sum_probs=197.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|++...... .......+.+|++++..++||||+++++++.+.+ ..++|||
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (350)
T cd05573 5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQDEE--HLYLVME 81 (350)
T ss_pred EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhheecCC--eEEEEEc
Confidence 3478999999999999986 5788999987543211 1233457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 82 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 82 YMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999998653 589999999999999999999998 999999999999999999999999999876543220
Q ss_pred ---------------------------CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc
Q 006178 521 ---------------------------KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN 573 (658)
Q Consensus 521 ---------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~ 573 (658)
........++..|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 01111223456799999999999999999999999999999999999754421
Q ss_pred HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPS-MQELCTM 631 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~~ 631 (658)
........... ....+... ..+..+.+++.+|+. ||.+||+ +.|+++.
T Consensus 237 --~~~~~i~~~~~---~~~~p~~~----~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 --ETYNKIINWKE---SLRFPPDP----PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred --HHHHHHhccCC---cccCCCCC----CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11111111000 00011111 134668899999997 9999999 9999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=296.17 Aligned_cols=249 Identities=19% Similarity=0.254 Sum_probs=197.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc----cchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH----WTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
++||+|..++|-++.++ +|+++|+|++...... ......+.-.+|+.||+++ .||+|+++.++++.+. ..++
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s--F~Fl 100 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA--FVFL 100 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc--hhhh
Confidence 78999999999998876 6789999998654321 1233445678899999999 7999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+|.|+.|.|.|++...- .+++.+..+|++|+.+|++|||.+ .||||||||+|||+|++.++||+|||+|+.+..
T Consensus 101 VFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 101 VFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred hhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeeccCC
Confidence 999999999999998553 599999999999999999999999 999999999999999999999999999988753
Q ss_pred cCCCCCCcccccCccccCCccccc------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
... ... .++++.|.|||.+.. ..|+...|+||.|||||.|+.|.+||..... + .+.+...+. -.+.
T Consensus 176 Gek-Lre--lCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-m-lMLR~ImeG---kyqF 247 (411)
T KOG0599|consen 176 GEK-LRE--LCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-M-LMLRMIMEG---KYQF 247 (411)
T ss_pred chh-HHH--hcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-H-HHHHHHHhc---cccc
Confidence 322 222 334566899999853 3588999999999999999999999953221 1 111111111 1122
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
-+|++. +.+....+||.+||+.||++|.|++|+++.
T Consensus 248 ~speWa----dis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 248 RSPEWA----DISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred CCcchh----hccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 233332 445668899999999999999999999865
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=326.19 Aligned_cols=252 Identities=17% Similarity=0.182 Sum_probs=194.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+++.. +++.+|+|.+..... ......+.+.+|+.+++.++|+||+++++++.+.+ ..++|||
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD--NLYLVME 81 (330)
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--eEEEEEC
Confidence 4588999999999999976 577888888754322 12234457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..+.....
T Consensus 82 ~~~~~~L~~~l~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 82 YQPGGDLLSLLNRYED-QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 9999999999976532 589999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccc------cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 521 KNPGTLGSQGAICILPSSLE------ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~------~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
. ......++..|+|||++. ...++.++|||||||++|||+||+.||..... ............... -+
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--~~~~~~i~~~~~~~~---~~ 231 (330)
T cd05601 158 V-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS--AKTYNNIMNFQRFLK---FP 231 (330)
T ss_pred e-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH--HHHHHHHHcCCCccC---CC
Confidence 1 112223456799999986 45678999999999999999999999965432 111222211111000 01
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ....+..+.+++.+|++ +|.+||++.++++.
T Consensus 232 ~----~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 232 E----DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred C----CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 1 11234567899999998 99999999998854
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=327.86 Aligned_cols=251 Identities=15% Similarity=0.157 Sum_probs=193.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.||+|.+...... .......+.+|++++..++||||+++++++.+.+ ..++||||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E~ 82 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-EKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN--YLYLIMEY 82 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--eEEEEECC
Confidence 488999999999999986 5788999988543211 1223456889999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 83 ~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 83 LPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 99999999997554 489999999999999999999999 9999999999999999999999999998754321100
Q ss_pred C------------------------------------CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCC
Q 006178 522 N------------------------------------PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRP 565 (658)
Q Consensus 522 ~------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~ 565 (658)
. ......++..|+|||++....++.++|||||||++|||++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0 0001235667999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 006178 566 PCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPS---MQELCTM 631 (658)
Q Consensus 566 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs---~~evl~~ 631 (658)
||...... ............. ..+.. ...++.+.+++.+|+. +|.+|++ +.|+++.
T Consensus 238 Pf~~~~~~--~~~~~i~~~~~~~---~~~~~----~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 238 PFCSDNPQ--ETYRKIINWKETL---QFPDE----VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCHH--HHHHHHHcCCCcc---CCCCC----CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99754321 1111111110000 00110 1223567799999996 9999998 8888764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=315.47 Aligned_cols=267 Identities=19% Similarity=0.282 Sum_probs=200.8
Q ss_pred hcccccCCCCeeEEEEEec-----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. .+..+|+|.+...... ...+.|.+|++++++++|+||+++++++...+....+
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4578999999999999864 3578899887543321 3456799999999999999999999999874444789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 85 lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 99999999999999976543 589999999999999999999999 99999999999999999999999999988764
Q ss_pred hcCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhc--CCcccccccC
Q 006178 517 ARSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE--LPEVMSYVVD 593 (658)
Q Consensus 517 ~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 593 (658)
....... ......+..|++||...+..++.++||||||+++|||+||+.|+.........+...... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 2221111 111223456899999988899999999999999999999999985432211110000000 0000000000
Q ss_pred Cc-CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 594 PE-LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 594 ~~-~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.. ....+...+.++.+++.+||+.+|++|||+.||+++|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00 0111233446788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=325.38 Aligned_cols=241 Identities=17% Similarity=0.141 Sum_probs=187.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+.. ++..+|+|.+...... .....+.+..|..++..+ +|++|+++++++.+.+ ..++||
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~ 80 (323)
T cd05616 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD--RLYFVM 80 (323)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC--EEEEEE
Confidence 4578999999999999987 4568888887543211 222334567788888887 6899999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999987544 489999999999999999999999 99999999999999999999999999987532111
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||++.+..++.++|||||||++|||+||+.||...... .......... ..+
T Consensus 156 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~i~~~~-----------~~~ 220 (323)
T cd05616 156 V--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIMEHN-----------VAY 220 (323)
T ss_pred C--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC-----------CCC
Confidence 1 111223456799999999999999999999999999999999999754322 1111111110 012
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
+...+.++.+++.+|++.||++|++.
T Consensus 221 p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 221 PKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 22344668899999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=319.04 Aligned_cols=196 Identities=19% Similarity=0.211 Sum_probs=157.2
Q ss_pred ccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
++||+|+||.||+|+.. +++.+|+|.+..... ...+.+|++++++++||||+++++++........++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 68999999999999975 456788888743221 234678999999999999999999987654446899999
Q ss_pred ecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccc
Q 006178 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDF 509 (658)
Q Consensus 441 ~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DF 509 (658)
|+. ++|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 995 5888887532 123589999999999999999999999 99999999999999 45678999999
Q ss_pred cchhhhhhcCCCC-CCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCC
Q 006178 510 DSWKTILARSEKN-PGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCK 569 (658)
Q Consensus 510 Gla~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~ 569 (658)
|+++.+....... ......++..|+|||++.+ ..++.++||||+||++|||+||++||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9998654322111 1112234567999999876 4589999999999999999999999964
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-38 Score=325.35 Aligned_cols=242 Identities=19% Similarity=0.177 Sum_probs=187.7
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|+..+ ++.+|+|.+..... ......+.+..|.+++..++| ++|+++++++.+.+ ..++|
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv 79 (324)
T cd05587 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFV 79 (324)
T ss_pred eEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC--EEEEE
Confidence 345889999999999999764 56789988754321 122234567889999999965 56888999888777 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 99999999999987554 489999999999999999999999 9999999999999999999999999988643211
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......++..|+|||++.+..++.++|||||||++|||+||+.||...... .......... ..
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~~~~-----------~~ 219 (324)
T cd05587 155 GK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIMEHN-----------VS 219 (324)
T ss_pred CC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCC-----------CC
Confidence 11 111223456799999999999999999999999999999999999754321 1111111110 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
++...+..+.+++.+||+.||.+|++.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 220 YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 122234567899999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=312.18 Aligned_cols=248 Identities=13% Similarity=0.174 Sum_probs=196.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||++... +++.+|+|.+..... ....+.+.+|+.++++++|+||+++++++.+.+ ..++|||
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 78 (255)
T cd08219 4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG--HLYIVME 78 (255)
T ss_pred EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC--EEEEEEe
Confidence 4578999999999999976 577888887743321 223457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++++|||.+........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 99999999998765445689999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....+...|+|||++.+..++.++||||||+++|+|++|+.||...... ........ ......+
T Consensus 156 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~~~~~~----------~~~~~~~ 221 (255)
T cd08219 156 Y--ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK--NLILKVCQ----------GSYKPLP 221 (255)
T ss_pred c--cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH--HHHHHHhc----------CCCCCCC
Confidence 1 11223456699999999888999999999999999999999999654321 11111111 1111122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++||++.|++.+
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 222 SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 3344568899999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=297.71 Aligned_cols=247 Identities=21% Similarity=0.214 Sum_probs=195.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|.|+.||++.+. .|+.+|+|.+..+..... ..+++.+|++|-+.++|||||++.+.+.+.. ..|+|+|+
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~--~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~--~~ylvFe~ 91 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDL 91 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc--cHHHHHHHHHHHHhcCCCcEeehhhhhcccc--eeEEEEec
Confidence 478999999999999875 678899888765543322 4567899999999999999999999988877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~ 518 (658)
|.|++|..-|-.+ ..+++..+-.+++||++||.|+|.+ +|||||+||+|+++... --+||+|||+|..+. .
T Consensus 92 m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~ 165 (355)
T KOG0033|consen 92 VTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-D 165 (355)
T ss_pred ccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC-C
Confidence 9999998766543 3588899999999999999999999 99999999999999643 358999999998875 2
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC-CcHHHHHHHhhcCCcccccccCCcCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK-GNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.....+. .+++.|||||++...+|+..+|||+.|||||-|+.|.+||.+++ ..+.+-+. .. .-++-.+.+.
T Consensus 166 g~~~~G~--~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~---~g---~yd~~~~~w~ 237 (355)
T KOG0033|consen 166 GEAWHGF--AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIK---AG---AYDYPSPEWD 237 (355)
T ss_pred ccccccc--cCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHh---cc---ccCCCCcccC
Confidence 2222233 34567999999999999999999999999999999999998643 22222211 11 0111112222
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...++..+|+++||..||.+|.|+.|.++.
T Consensus 238 ----~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 238 ----TVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred ----cCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 234567899999999999999999998854
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=326.81 Aligned_cols=197 Identities=22% Similarity=0.226 Sum_probs=168.2
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-C-----CCccceeeEEecCC
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H-----ENTGKLLGYCRESS 431 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~nIv~l~~~~~~~~ 431 (658)
.+...+.||+|+||.|-||.+. +++.||+|.++.+... ..+-..|+.+|..++ | -|+|++++||...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-----~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-----LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH-----HHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 4555689999999999999976 4778888888554432 345668999999996 4 38999999999998
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC--Cceeccc
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF--SPKLVDF 509 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~--~~kl~DF 509 (658)
+.|||+|.+.. +|+++++.+...+++...++.++.||+.||.+||+. +|||+||||+||||.+.. .+||+||
T Consensus 262 --HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 262 --HLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred --ceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEec
Confidence 89999999965 999999988877899999999999999999999999 999999999999997543 7999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK 571 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~ 571 (658)
|.|...... .....+...|+|||++.+.+|+.+.||||||||+.||+||.+-|.++.
T Consensus 336 GSSc~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 336 GSSCFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred ccccccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 998764321 124456678999999999999999999999999999999988886543
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=322.33 Aligned_cols=242 Identities=19% Similarity=0.162 Sum_probs=187.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.+|+|.+..... ......+.+.+|+.++.++ +||||+++++++.+.+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 77 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV-HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS--RLFLVIEY 77 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC--EEEEEEeC
Confidence 46999999999999976 467788888754321 1223345688999999988 6999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 78 ~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 151 (327)
T cd05617 78 VNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD- 151 (327)
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-
Confidence 99999999887543 499999999999999999999999 999999999999999999999999998874321111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC----cHHHHHHHhhcCCcccccccCCcCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG----NLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
......++..|+|||++.+..++.++|||||||++|||+||+.||..... ....+....... . ..
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---------~-~~ 220 (327)
T cd05617 152 -TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE---------K-PI 220 (327)
T ss_pred -ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh---------C-CC
Confidence 11122345679999999999999999999999999999999999953211 111111111110 0 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
..+...+..+.+++.+||+.||++|+++
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 1222334567899999999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=314.09 Aligned_cols=239 Identities=19% Similarity=0.274 Sum_probs=181.9
Q ss_pred cccCCCCeeEEEEEecC-------------------------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC
Q 006178 365 IIGSSPDSLVYKGTMKG-------------------------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n 419 (658)
.||+|+||.||+|.... ...|++|.+.... ......|.+|+.++++++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH----RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH----HHHHHHHHHHHHHHhcCCCCC
Confidence 59999999999998521 1246666653221 223456888999999999999
Q ss_pred ccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec
Q 006178 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 420 Iv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~ 499 (658)
|+++++++.+.. ..++||||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++
T Consensus 78 iv~~~~~~~~~~--~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~ 151 (274)
T cd05076 78 LAFVHGVCVRGS--ENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLA 151 (274)
T ss_pred eeeEEEEEEeCC--ceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEe
Confidence 999999998877 6799999999999999987533 2589999999999999999999999 999999999999998
Q ss_pred CCC-------CceeccccchhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHH-hCCCCCCCC
Q 006178 500 EDF-------SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEII-SGRPPCCKD 570 (658)
Q Consensus 500 ~~~-------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~ell-tG~~p~~~~ 570 (658)
+++ .+|++|||.+....... ...++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||...
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~~------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 225 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSRE------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER 225 (274)
T ss_pred ccCcccCccceeeecCCcccccccccc------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 654 37999999875432211 1223456999998875 56899999999999999995 799998654
Q ss_pred CCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 571 KGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
........ ...... .+......+.+++.+||+.+|++|||+.+|++.|.
T Consensus 226 ~~~~~~~~---~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 226 TPSEKERF---YEKKHR-----------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ChHHHHHH---HHhccC-----------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 32211111 110000 11112245789999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=312.34 Aligned_cols=251 Identities=20% Similarity=0.215 Sum_probs=191.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. +++.+|+|++..+.. ...+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 12 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--~~~iv~ 85 (267)
T cd06646 12 ELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--KLWICM 85 (267)
T ss_pred chhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--EEEEEE
Confidence 34588999999999999975 567788887753321 12346788999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.++++... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+....
T Consensus 86 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 86 EYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 9999999999987543 589999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. .....+...|+|||.+. ...++.++|||||||++|||++|+.||......... ..... .....+..
T Consensus 161 ~~--~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-----~~~~~--~~~~~~~~ 231 (267)
T cd06646 161 AK--RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-----FLMSK--SNFQPPKL 231 (267)
T ss_pred cc--cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-----eeeec--CCCCCCCC
Confidence 11 11123345689999874 345788999999999999999999998533211000 00000 00001111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
. .....+..+.+++.+||+.+|++|||++++++.|
T Consensus 232 ~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 K-DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred c-cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1 1123346788999999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=335.90 Aligned_cols=255 Identities=18% Similarity=0.210 Sum_probs=185.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC------CCCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES------SPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~ 434 (658)
+.+.||+|+||.||+|... +++.||+|++.... ....+|+.++++++||||+++++++... ....
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 4589999999999999975 57889999874321 1245799999999999999999987432 1124
Q ss_pred eEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-Cceeccccc
Q 006178 435 RMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDS 511 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl 511 (658)
.++||||+++ +|.+++.. .....+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecccc
Confidence 6799999975 78777653 2234689999999999999999999999 999999999999999664 799999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCCc--
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPE-- 586 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~~-- 586 (658)
|+.+..... .....++..|+|||++.+ ..++.++|||||||++|||+||.+||.+.... +............
T Consensus 218 a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~ 294 (440)
T PTZ00036 218 AKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQ 294 (440)
T ss_pred chhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 987543221 111234567999999876 46999999999999999999999999754321 1111111000000
Q ss_pred ------ccccccCCcCC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 ------VMSYVVDPELK------HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ------~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+.-+... .++...+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00000001100 1122345678999999999999999999999854
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=324.45 Aligned_cols=252 Identities=14% Similarity=0.133 Sum_probs=189.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|+.. +++.+|+|.+..... ........+.+|+.++.+++|+||+++++.+.+.. ..++||||
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~--~~~lv~E~ 82 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL--NLYLIMEF 82 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--eEEEEEcC
Confidence 478999999999999976 467888888754321 12223456889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 83 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 83 LPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 99999999997654 489999999999999999999999 9999999999999999999999999998754321100
Q ss_pred ---------------------------------CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 522 ---------------------------------NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 522 ---------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
.......++..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 00012245677999999999999999999999999999999999996
Q ss_pred CCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 006178 569 KDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVN--PDITKRPSMQELCTM 631 (658)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~--~dP~~RPs~~evl~~ 631 (658)
..... ............ ...+.... ....+.+++.+++. .++..||+++||++.
T Consensus 238 ~~~~~--~~~~~i~~~~~~---~~~p~~~~----~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 238 SETPQ--ETYKKVMNWKET---LIFPPEVP----ISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCHH--HHHHHHHcCcCc---ccCCCcCC----CCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 54321 111111111000 00111111 23456677777543 233456899999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=317.19 Aligned_cols=250 Identities=16% Similarity=0.136 Sum_probs=194.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||++... +++.+|+|++...... .....+.+.+|+.++++++|+||+++++.+.+.+ ..++||||
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 81 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTL 81 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--EEEEEEEe
Confidence 378999999999999976 5778899887543322 2223345778999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 9999999998755545699999999999999999999998 999999999999999999999999998865432111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||........ ......... .. ...+
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~---~~-------~~~~ 225 (285)
T cd05630 158 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VQ-------EEYS 225 (285)
T ss_pred --ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---hh-------hhcC
Confidence 1112345679999999999999999999999999999999999975432211 111111000 00 0112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
......+.+++.+||+.||++||| ++|++++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 226 EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 223456789999999999999999 7888763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=325.46 Aligned_cols=251 Identities=16% Similarity=0.134 Sum_probs=190.4
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+++... ++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.+ ..++|||
T Consensus 47 ~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~~~lv~E 123 (370)
T cd05621 47 VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFE-MIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK--YLYMVME 123 (370)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-hhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEc
Confidence 34889999999999999874 6678888774322 112223456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 124 y~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 124 YMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred CCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 99999999999643 478999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCCcccccCccccCCcccccC----CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 521 KNPGTLGSQGAICILPSSLEAR----HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~----~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.......++..|+|||.+.+. .++.++||||+||++|||+||+.||..... ............... -+
T Consensus 198 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~--~~~~~~i~~~~~~~~---~p-- 269 (370)
T cd05621 198 -VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL--VGTYSKIMDHKNSLN---FP-- 269 (370)
T ss_pred -eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCcccC---CC--
Confidence 111223356779999998754 378999999999999999999999975432 111111111100000 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
.....+..+.+++.+|++.++.+ ||++.|+++.
T Consensus 270 --~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 270 --EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred --CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 01123456778999999865544 8899999886
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=308.25 Aligned_cols=263 Identities=21% Similarity=0.279 Sum_probs=200.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc--cCCCccceeeEEecCC--CCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLLGYCRESS--PFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~~--~~~~~l 437 (658)
+.++||+|+||.||||.+.+ +.||||++.. ...+.|.+|-+|.+.. +|+||++++++-.... ..+.+|
T Consensus 214 l~eli~~Grfg~V~KaqL~~-~~VAVKifp~-------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLDN-RLVAVKIFPE-------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred hHHHhhcCccceeehhhccC-ceeEEEecCH-------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34689999999999999976 8999998743 2345788888887765 8999999999865433 236799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhc------CCCCeeeccCCCcceeecCCCCceeccccc
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE------LGPPFTISELNSSAVYLTEDFSPKLVDFDS 511 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~------~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 511 (658)
|+||.+.|+|.+||+.+ .++|.+..+|+.-+++||+|||+. .+|+|+|||||+.|||+..|+++.|+|||+
T Consensus 286 Vt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999999866 589999999999999999999964 357999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCC-CC-----ccccchhhHHHHHHHHhCCCCCCC---------------C
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARH-LD-----VQGNIYAFGVLLLEIISGRPPCCK---------------D 570 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~-----~ksDVwS~Gvvl~elltG~~p~~~---------------~ 570 (658)
|..+.............++.+|||||++.+.. +. .+.||||+|.|||||++...-++. .
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 99987555554444566788999999997632 22 478999999999999996543321 1
Q ss_pred CCcHHHHHHHhhcCCcccccccCCcCCCC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 571 KGNLVDWAKDYLELPEVMSYVVDPELKHF--SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
...+.+....... +...|.++.. ....+..+++.+..||+.||+.|.|+.=|.+++.++......
T Consensus 443 hPt~e~mq~~VV~------kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 443 HPTLEEMQELVVR------KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCHHHHHHHHHh------hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 1111111111111 0111111110 113456788999999999999999999999999888765543
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=328.13 Aligned_cols=251 Identities=14% Similarity=0.147 Sum_probs=191.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+++.. +++.+|+|++..... ......+.+.+|++++++++||||+++++++.+.+ ..|+||||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv~E~ 82 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ--YLYLIMEF 82 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eeEEEEeC
Confidence 478999999999999875 678899998754321 12233457889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 83 ~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 83 LPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 99999999997543 489999999999999999999999 9999999999999999999999999998643211000
Q ss_pred ------------C---------------------------------CCcccccCccccCCcccccCCCCccccchhhHHH
Q 006178 522 ------------N---------------------------------PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVL 556 (658)
Q Consensus 522 ------------~---------------------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvv 556 (658)
. ......++..|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0 0001234567999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 006178 557 LLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKR---PSMQELCTM 631 (658)
Q Consensus 557 l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R---Ps~~evl~~ 631 (658)
+|||+||+.||...... ............. .-+.. ...+.++.+++.+|+. +|.+| +++.|+++.
T Consensus 238 l~elltG~~Pf~~~~~~--~~~~~i~~~~~~~---~~p~~----~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 238 MFECLIGWPPFCSENSH--ETYRKIINWRETL---YFPDD----IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhcCCCCCCCCCHH--HHHHHHHccCCcc---CCCCC----CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999999999654321 1111111110000 00111 1123567899999997 67665 599998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=316.21 Aligned_cols=259 Identities=20% Similarity=0.195 Sum_probs=189.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc---cCCCccceeeEEecCC---CCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESS---PFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~---~~~ 434 (658)
+.+.||+|+||.||+|+.. +++.+|+|.+...... ......+.+|+++++++ +||||+++++++.... ...
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 4 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred EeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 3478999999999999986 5778888887543221 11223456777777665 7999999999886432 225
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.++||||++ ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 799999997 4899998765555689999999999999999999999 999999999999999999999999999876
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCC--cccc-
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELP--EVMS- 589 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~--~~~~- 589 (658)
...... .....++..|+|||++.+..++.++|||||||++|||++|++||...... ...... ....+ ....
T Consensus 158 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~ 233 (288)
T cd07863 158 YSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD-LIGLPPEDDWPR 233 (288)
T ss_pred ccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHH-HhCCCChhhCcc
Confidence 532211 11223456799999999889999999999999999999999999654321 111111 11000 0000
Q ss_pred ------cccCCcC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 590 ------YVVDPEL----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 590 ------~~~~~~~----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
....+.. ....+.....+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000 0111234466789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=309.36 Aligned_cols=240 Identities=18% Similarity=0.290 Sum_probs=182.6
Q ss_pred ccccCCCCeeEEEEEecCC-------------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC
Q 006178 364 NIIGSSPDSLVYKGTMKGG-------------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~-------------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 430 (658)
+.||+|+||.||+|+.... ..+++|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 3689999999999985421 24666654322 123345788899999999999999999999887
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC-------
Q 006178 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS------- 503 (658)
Q Consensus 431 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~------- 503 (658)
. ..++||||+++|+|..++.... ..+++..+.+++.||++||+|||++ +|+||||||+|||++.++.
T Consensus 77 ~--~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 77 V--ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred C--CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCce
Confidence 6 6799999999999999887543 3589999999999999999999999 9999999999999987664
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCcccc-cCCCCccccchhhHHHHHHHH-hCCCCCCCCCCcHHHHHHHh
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE-ARHLDVQGNIYAFGVLLLEII-SGRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~ksDVwS~Gvvl~ell-tG~~p~~~~~~~~~~~~~~~ 581 (658)
+|++|||++....... ...++..|+|||.+. +..++.++|||||||++|||+ +|+.||.......... .
T Consensus 151 ~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~---~ 221 (262)
T cd05077 151 IKLSDPGIPITVLSRQ------ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER---F 221 (262)
T ss_pred eEeCCCCCCccccCcc------cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH---H
Confidence 8999999876542211 112345699999887 467899999999999999998 5888875432211111 1
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
.... .. ........+.+++.+||+.||++||++.+|++.++
T Consensus 222 ~~~~---~~--------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 222 YEGQ---CM--------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HhcC---cc--------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1100 00 00112356789999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=309.21 Aligned_cols=251 Identities=15% Similarity=0.203 Sum_probs=197.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|++|.||++... +++.+|+|++..... .....+.+.+|++++++++|+|++++++.+...+. ..+++|
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~ 79 (257)
T cd08223 3 CFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG-LLYIVM 79 (257)
T ss_pred eEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCC-EEEEEe
Confidence 34588999999999999976 467889998754332 22334568899999999999999999998764432 578999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.......+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999999865445689999999999999999999999 99999999999999999999999999987653222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......+...|+|||...+..++.++||||||+++|||++|+.||...+. .......... .....
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~~----------~~~~~ 222 (257)
T cd08223 157 D--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--NSLVYRIIEG----------KLPPM 222 (257)
T ss_pred C--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhc----------CCCCC
Confidence 1 11222345679999999999999999999999999999999999864432 2222211111 11122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.+|++||++.|++++
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 33455678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=319.38 Aligned_cols=196 Identities=20% Similarity=0.226 Sum_probs=156.7
Q ss_pred ccccCCCCeeEEEEEecC---CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+||+|+||.||+|+..+ +..+|+|.+.... ....+.+|++++++++||||+++++++........++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 579999999999999753 4678888774322 1235778999999999999999999986554447899999
Q ss_pred ecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccc
Q 006178 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDF 509 (658)
Q Consensus 441 ~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DF 509 (658)
|++ ++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+||++ ++++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 996 4888877522 123588999999999999999999999 99999999999999 46678999999
Q ss_pred cchhhhhhcCCCCC-CcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCC
Q 006178 510 DSWKTILARSEKNP-GTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCK 569 (658)
Q Consensus 510 Gla~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~ 569 (658)
|+++.......... .....++..|+|||.+.+ ..++.++|||||||++|||+||++||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99986543221111 112234567999999876 4589999999999999999999999964
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=320.24 Aligned_cols=242 Identities=17% Similarity=0.165 Sum_probs=188.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+|.+.||+|+||.||+|+.. +++.||+|.+..... ......+.+..|..++..+. |++|+++++++.+.+ ..++|
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv 79 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD--RLYFV 79 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC--EEEEE
Confidence 45689999999999999976 577899998754321 12223456778999998885 677888999888877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 80 ~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 80 MEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 99999999999987544 489999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......++..|+|||++.+..++.++|||||||++|||+||+.||...... ........... .
T Consensus 155 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~~~~~-----------~ 219 (323)
T cd05615 155 GV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQSIMEHNV-----------S 219 (323)
T ss_pred Cc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-----------C
Confidence 11 111223456799999999999999999999999999999999999754321 11121111110 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
++...+..+.+++.+||+.+|.+|++.
T Consensus 220 ~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 220 YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 122334567899999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=314.18 Aligned_cols=249 Identities=17% Similarity=0.135 Sum_probs=193.5
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|... +++.+|+|.+...... .....+.+.+|++++++++|+||+++++++...+ ..++||||
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 81 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYETKD--ALCLVLTI 81 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--EEEEEEEe
Confidence 378999999999999975 5778899887543221 2223345788999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 9999999988755444699999999999999999999999 999999999999999999999999998865432111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH--HHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--VDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....++..|+|||.+.+..++.++|||||||++|||+||+.||....... ..+........ ..+
T Consensus 158 --~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~-----------~~~ 224 (285)
T cd05632 158 --IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE-----------EVY 224 (285)
T ss_pred --ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc-----------ccc
Confidence 112234577999999998899999999999999999999999997543211 11111111110 011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
+...+..+.+|+.+||+.||++||+ +.++++.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 2233456789999999999999999 5565553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=328.29 Aligned_cols=251 Identities=14% Similarity=0.094 Sum_probs=189.0
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.+|+|++..... ......+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~--~~~lv~E~ 82 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV-LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMDY 82 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--EEEEEEeC
Confidence 478999999999999976 567888888754321 12233457889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC-
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE- 520 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~- 520 (658)
+++|+|.+++.+.+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++..+.....
T Consensus 83 ~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 83 IPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 99999999997553 488999999999999999999999 999999999999999999999999999754311000
Q ss_pred --------------------------------------------CCCCcccccCccccCCcccccCCCCccccchhhHHH
Q 006178 521 --------------------------------------------KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVL 556 (658)
Q Consensus 521 --------------------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvv 556 (658)
........++..|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000011234567999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 006178 557 LLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPS---MQELCTM 631 (658)
Q Consensus 557 l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs---~~evl~~ 631 (658)
+|||+||+.||........ .......... ...+. ....+.++.+++.+|+ .+|++|++ +.|+++.
T Consensus 238 l~elltG~~Pf~~~~~~~~--~~~i~~~~~~---~~~p~----~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLET--QMKVINWQTS---LHIPP----QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHHhCCCCCCCCCHHHH--HHHHHccCCC---cCCCC----cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 9999999999975432211 1111110000 00011 1122345677887765 59999987 8777653
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=309.70 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=195.5
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|.+.++..+++|.+..... ....+.+|++++++++|||++++++++.... ..++|||
T Consensus 7 ~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 79 (256)
T cd05112 7 TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS--PICLVFE 79 (256)
T ss_pred EEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC--ceEEEEE
Confidence 34588999999999999988788899998743221 2346889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 80 FMEHGCLSDYLRAQRG-KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred cCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 9999999999875433 589999999999999999999999 999999999999999999999999998875432211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. .......+..|+|||.+.++.++.++||||||+++|||++ |+.||..... .......... .....+.
T Consensus 156 ~-~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~----~~~~~~~---- 224 (256)
T cd05112 156 T-SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SEVVETINAG----FRLYKPR---- 224 (256)
T ss_pred c-ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHhCC----CCCCCCC----
Confidence 1 1111112346899999998899999999999999999998 9999864332 2222211110 0001111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
..+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 225 --~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 --LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12366889999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=307.84 Aligned_cols=250 Identities=14% Similarity=0.144 Sum_probs=199.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||.|+||.||.++.. ++..+++|++...... ....+++.+|++++++++|+||+++++++.+.+ ..+++||
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~~~e 79 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--EKERRDALNEIVILSLLQHPNIIAYYNHFMDDN--TLLIEME 79 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc--hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC--eEEEEEE
Confidence 4578999999999999865 5778888887544322 233457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.......+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999999865445689999999999999999999998 999999999999999999999999999876533221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|.|||...+..++.++||||||+++|||++|+.||..... .+....... ......+
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~~~~~~~~~----------~~~~~~~ 222 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--LNLVVKIVQ----------GNYTPVV 222 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHc----------CCCCCCc
Confidence 11222345679999999888899999999999999999999999965322 122211111 1111112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
...+..+.+++.+||+.+|.+||++.|+++.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 33446688999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=311.62 Aligned_cols=247 Identities=20% Similarity=0.290 Sum_probs=189.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC----CceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
.+.||+|+||.||+|... +++.+|+|.+..... ....+.+|+.+++++ +|+||+++++++..... ...+
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 478999999999999976 466778877643321 235678999999999 79999999999875431 2578
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~ 162 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 162 (272)
T ss_pred EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence 999999999999999865545689999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
..... .....+...|+|||++. +..++.++|||||||++|||++|+.||.......... .. ... .
T Consensus 163 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-~~-~~~--~---- 232 (272)
T cd06637 163 RTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-LI-PRN--P---- 232 (272)
T ss_pred ccccc--CCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-HH-hcC--C----
Confidence 22111 11223345689999986 3458889999999999999999999996433211111 10 000 0
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+.. .....+..+.+++.+||..+|.+|||+.|+++
T Consensus 233 -~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 233 -APRL--KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -CCCC--CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0000 11123456889999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=309.49 Aligned_cols=253 Identities=17% Similarity=0.212 Sum_probs=193.5
Q ss_pred HHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC
Q 006178 356 EVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (658)
Q Consensus 356 ~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 432 (658)
+.+++++. ..||+|+||.||+|++. ++..+++|.+..+. ....+.+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~- 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG- 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-
Confidence 33444443 68999999999999976 46678888774332 223457899999999999999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccc
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDF 509 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DF 509 (658)
..++||||+++++|.+++..... .+ ++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 79 -FFKIFMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred -EEEEEEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecc
Confidence 78999999999999999975422 34 8888999999999999999999 9999999999999986 678999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccccCC--CCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCc
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLEARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPE 586 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~ 586 (658)
|++........ ......++..|+|||++.+.. ++.++||||||+++|||++|+.||....... ..+.....
T Consensus 154 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~---- 227 (268)
T cd06624 154 GTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF---- 227 (268)
T ss_pred hhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh----
Confidence 98875432211 111223456799999986643 7899999999999999999999986433211 11111100
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+....+.+.+++.+||+.+|++|||+.|+++.
T Consensus 228 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 228 -------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 01112233445678899999999999999999998763
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=343.59 Aligned_cols=261 Identities=18% Similarity=0.153 Sum_probs=199.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.++||+|+||.||+|++. +++.||+|++..... ......+++.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~-~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~--~lyLVME 82 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS-ENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD--PVYYTMP 82 (932)
T ss_pred EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc-cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC--EEEEEEE
Confidence 3478999999999999976 578899998854322 22334567999999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccc
Q 006178 441 YASNGTLYEHLHYG---------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511 (658)
Q Consensus 441 ~~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 511 (658)
|+++|+|.+++... ....+++..+++++.||++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCc
Confidence 99999999998631 112467788999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhcCCC----------------CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH
Q 006178 512 WKTILARSEK----------------NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575 (658)
Q Consensus 512 a~~~~~~~~~----------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~ 575 (658)
++........ .......++..|+|||.+.+..++.++|||||||++|||+||+.||........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 9865211100 000112356779999999999999999999999999999999999965332211
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhccCC
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRP-SMQELCTMLEGRIDT 638 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~ 638 (658)
... .... ++.........+..+.+++.+|++.||++|| +++++.+.|+.....
T Consensus 240 ~~~-~~i~---------~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 240 SYR-DVIL---------SPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhh-hhcc---------ChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 0000 1100000113345678999999999999995 678888888877654
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=311.44 Aligned_cols=257 Identities=23% Similarity=0.297 Sum_probs=196.1
Q ss_pred hcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----C
Q 006178 362 FSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----F 433 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~ 433 (658)
+.+.||+|+||.||+|.+. .+..+|+|.+..+.. .....+++.+|++++++++||||+++++++..... .
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF--SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC--ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 3478999999999999864 357889988754322 22334578899999999999999999998865431 1
Q ss_pred ceEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 434 TRMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
..++++||+++|+|.+++... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 347899999999999887522 122578999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
|+++................+..|++||.+....++.++||||||+++|||++ |+.||..... .......... ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~-~~- 233 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKG-NR- 233 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcC-Cc-
Confidence 99886543222222222334467899999998889999999999999999999 8899864432 1111111111 10
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
...+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 234 --------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 --------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011122346788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=309.74 Aligned_cols=250 Identities=19% Similarity=0.238 Sum_probs=195.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc-----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+...||+|+||.||+|... +++.+|+|.+....... .....+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 81 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD--HL 81 (267)
T ss_pred ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC--cc
Confidence 4578999999999999975 56789998875543221 1123356889999999999999999999998877 77
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 99999999999999997553 489999999999999999999999 9999999999999999999999999998876
Q ss_pred hhcCCCCCC----cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 516 LARSEKNPG----TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 516 ~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
......... ....+...|+|||.+.+..++.++|||||||++|||++|+.||...... .. .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~-~~~~~--------- 225 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-QA-IFKIG--------- 225 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-HH-HHHHh---------
Confidence 432111111 1112345689999999888999999999999999999999999653221 11 11100
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.......+...+..+.+++.+||+.||.+||++.|+++
T Consensus 226 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 -ENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -ccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00111223334567889999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=321.60 Aligned_cols=256 Identities=19% Similarity=0.172 Sum_probs=190.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
..+.||+|+||.||+++.. .+..+|+|++..... .....+.+.+|+.+++.++||||+++++++..... ...+
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 102 (359)
T cd07876 25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ--NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVY 102 (359)
T ss_pred EEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc--chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeE
Confidence 3489999999999999975 578899998854322 22334567899999999999999999999865432 1469
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 103 LVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred EEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 99999965 67776642 378999999999999999999999 99999999999999999999999999987542
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHH----------------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD---------------- 580 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~---------------- 580 (658)
... ......++..|+|||.+.+..++.++|||||||++|||+||+.||...+. ...|...
T Consensus 175 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 250 (359)
T cd07876 175 TNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH-IDQWNKVIEQLGTPSAEFMNRLQ 250 (359)
T ss_pred cCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCcHHHHHHHH
Confidence 211 11222345679999999999999999999999999999999999975431 1111110
Q ss_pred -----hhcCCcccc---------cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 581 -----YLELPEVMS---------YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 581 -----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......... ....+............+.+++.+||+.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 251 PTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000 000000001111224568899999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=326.54 Aligned_cols=252 Identities=15% Similarity=0.100 Sum_probs=190.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|.+..... ......+.+.+|++++++++||||+++++.+.+.+ ..++|||
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E 81 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMD 81 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--EEEEEEe
Confidence 3478999999999999976 477888888743321 11223456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|..+.....
T Consensus 82 ~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 82 YIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 999999999997654 488999999999999999999999 999999999999999999999999999753310000
Q ss_pred -----------------------------------------CCCCcccccCccccCCcccccCCCCccccchhhHHHHHH
Q 006178 521 -----------------------------------------KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLE 559 (658)
Q Consensus 521 -----------------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~e 559 (658)
........++..|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 000011235667999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 006178 560 IISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRP---SMQELCTM 631 (658)
Q Consensus 560 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP---s~~evl~~ 631 (658)
|+||+.||...... ............ ...+.. ...+..+.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 237 ll~G~~Pf~~~~~~--~~~~~i~~~~~~---~~~~~~----~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 237 MLVGQPPFLADTPA--ETQLKVINWETT---LHIPSQ----AKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhhCCCCCCCCCHH--HHHHHHhccCcc---ccCCCC----CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999754422 111111110000 000111 122345678888876 5999999 88988865
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=322.29 Aligned_cols=252 Identities=17% Similarity=0.150 Sum_probs=189.7
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||++++.. ++.+|+|.+.... .......+.+.+|+.+++.++||||+++++++.+.. ..++|||
T Consensus 47 i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~~~lv~E 123 (371)
T cd05622 47 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR--YLYMVME 123 (371)
T ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHH-hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEc
Confidence 34899999999999999874 5677777764322 112223456789999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 124 y~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 124 YMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred CCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence 99999999998743 378899999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCCcccccCccccCCcccccC----CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 521 KNPGTLGSQGAICILPSSLEAR----HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~----~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.......++..|+|||++... .++.++|||||||++|||++|+.||..... ............... -+.
T Consensus 198 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~~~~---~~~- 270 (371)
T cd05622 198 -VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKIMNHKNSLT---FPD- 270 (371)
T ss_pred -ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCCccc---CCC-
Confidence 111223356779999998754 378999999999999999999999975432 111122111111100 011
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTML 632 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~L 632 (658)
....+..+.+++.+|+..++.+ ||++.|+++..
T Consensus 271 ---~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 271 ---DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred ---cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1123456789999999844433 78999888753
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=307.11 Aligned_cols=251 Identities=19% Similarity=0.231 Sum_probs=196.3
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccc--cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|+||.||+|...+++.+|+|.+..+... ......+.+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 82 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN--TISIFME 82 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC--eEEEEEe
Confidence 4689999999999999888889999988654321 12223456899999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.+.. .+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||++........
T Consensus 83 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 83 FVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 999999999997543 488999999999999999999999 999999999999999999999999999876532111
Q ss_pred C----CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 521 K----NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 521 ~----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
. .......++..|+|||++.+..++.++|||||||++|||+||+.||...+.. ...... ..... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~~~-~~~~~--------~~ 227 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-AAMFYI-GAHRG--------LM 227 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-HHHHHh-hhccC--------CC
Confidence 1 1111223456689999999888999999999999999999999999643321 111100 00000 01
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...+...+..+.+++.+||+.+|++||++.|+++
T Consensus 228 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1122234466889999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=318.15 Aligned_cols=251 Identities=20% Similarity=0.196 Sum_probs=203.9
Q ss_pred hhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|.||.||+++.+. |+.+|+|.+.++... .....+.+.+|+++|+++. |||||.+++++++.. ..++
T Consensus 37 Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~-~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~--~~~l 113 (382)
T KOG0032|consen 37 YELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR-GKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD--SVYL 113 (382)
T ss_pred EEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcc-ccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC--eEEE
Confidence 4455899999999999999885 889999998655432 2224467899999999997 999999999999988 8899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC----CCceeccccchh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKLVDFDSWK 513 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 513 (658)
|||++.||.|.+.+... .+++..+..++.|++.|++|||+. +|+||||||+|+|+... +.+|++|||+|.
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999999866 399999999999999999999999 99999999999999743 479999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
.... ........+++.|+|||++....|+.++||||.||++|.|++|.+||.......... ..... . ..+.+
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--~i~~~-~--~~f~~ 259 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--AILRG-D--FDFTS 259 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--HHHcC-C--CCCCC
Confidence 7643 222334456778999999999999999999999999999999999997665332221 11111 0 01111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+ .-...+..+.+++.+|+..||.+|+|+.+++++
T Consensus 260 ~----~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 260 E----PWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred C----CccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1 123345678899999999999999999999996
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=312.07 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=194.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.+++|.+...... ..+.+.+|+.+++.++|+||+++++++.... +.++||||
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~--~~~lv~e~ 98 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEY 98 (296)
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc----hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEeecc
Confidence 478999999999999964 6788999887543322 2356889999999999999999999998776 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred cCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 9999999998643 479999999999999999999999 9999999999999999999999999988764322211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+... .... .+.. ..+.
T Consensus 173 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-~~~~~~-~~~~-------~~~~-~~~~ 240 (296)
T cd06654 173 --RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-RALYLI-ATNG-------TPEL-QNPE 240 (296)
T ss_pred --cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-HhHHHH-hcCC-------CCCC-CCcc
Confidence 11223456799999999888999999999999999999999999654321 111111 1000 0000 1123
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.+|++||++.|+++.
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 344668899999999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=312.25 Aligned_cols=252 Identities=16% Similarity=0.235 Sum_probs=197.4
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||+||++... +++.+|+|.+.... .....+.+.+|+++++.++||||+++++++...+ ..++|
T Consensus 7 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 81 (284)
T cd06620 7 LETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN--NICMC 81 (284)
T ss_pred HHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC--EEEEE
Confidence 344588999999999999976 46777887764332 1234567899999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++++|.+++...+ .+++..+..++.|++.||.|||+.. +++||||||+||++++++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 82 MEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 99999999999987543 4899999999999999999999731 8999999999999999999999999988654322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc---------HHHHHHHhhcCCcccc
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN---------LVDWAKDYLELPEVMS 589 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~---------~~~~~~~~~~~~~~~~ 589 (658)
.. ....++..|+|||++.+..++.++|||||||++||++||+.||...... ...+.....
T Consensus 158 ~~----~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 226 (284)
T cd06620 158 IA----DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV------- 226 (284)
T ss_pred cc----CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-------
Confidence 11 1223456799999998889999999999999999999999999743321 111111111
Q ss_pred cccCCcCCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 590 YVVDPELKHFS-YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 590 ~~~~~~~~~~~-~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.......+ ...+..+.+++.+||+.||++|||+.|+++...-
T Consensus 227 ---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 227 ---QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred ---hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 11111111 1245678899999999999999999999987543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=316.73 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=194.4
Q ss_pred ccccCCCCeeEEEEEec-CCC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.||+|+||.||+|... ++. .+|+|.+.... ......++.+|+.++++++||||+++++++... ..+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---~~~~v 86 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLV 86 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---Cceee
Confidence 68999999999999875 333 35666553221 122334688999999999999999999998754 35799
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
+||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+...
T Consensus 87 ~e~~~~g~l~~~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 87 TQLMPHGCLLDYVHEHKD-NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ehhcCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccCc
Confidence 999999999999875432 589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
...........+..|++||.+.+..++.++|||||||++|||++ |+.||..... ....+.. .....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~----~~~~~-------- 230 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE----KGERL-------- 230 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----CCCCC--------
Confidence 22111112223456999999998999999999999999999998 8999865432 1222211 11110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..+...+..+.+++.+||..+|++||++.++++.|+++....
T Consensus 231 -~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 231 -PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 011123356789999999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=327.05 Aligned_cols=252 Identities=14% Similarity=0.105 Sum_probs=186.6
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++.. ++.||+|.... ..+.+|++++++++|+|||++++++...+ ..++|||+
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~--~~~lv~e~ 241 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVGG--LTCLVLPK 241 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEEc
Confidence 3789999999999999874 66788885311 23568999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+. ++|.+++..... .+++.+++.|+.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 242 ~~-~~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 YR-SDLYTYLGARLR-PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred cC-CCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 94 699998865433 599999999999999999999999 9999999999999999999999999998765432221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC---------CcHHHHHHHhhcCCcccccc-
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK---------GNLVDWAKDYLELPEVMSYV- 591 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~- 591 (658)
.......++..|+|||++.+..++.++|||||||++|||++|..|+.... ..+...+.............
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 11112234667999999999999999999999999999999887653211 01111111110000000000
Q ss_pred ---------------cCCcCCC--C--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 ---------------VDPELKH--F--SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ---------------~~~~~~~--~--~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.... . .......+.+|+.+||+.||.+|||+.|+++.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000 0 00122467899999999999999999999874
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=316.86 Aligned_cols=258 Identities=19% Similarity=0.185 Sum_probs=190.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 84 (309)
T cd07872 10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK--SLTLVFE 84 (309)
T ss_pred EEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC---CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC--eEEEEEe
Confidence 3478999999999999976 5677888887543321 12345778999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++ +|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~~-~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 85 YLDK-DLKQYMDDCGN-IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCCC-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 9975 89888865432 589999999999999999999999 999999999999999999999999999875432211
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--ccc-------
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--VMS------- 589 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~------- 589 (658)
. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...........+. ...
T Consensus 160 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 160 T--YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred c--cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 1 112234567999998865 46899999999999999999999999754321 1111111111000 000
Q ss_pred --cccCCcCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 --YVVDPELK-----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 --~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+... ......+.++.+++.+||+.||.+|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000000 0011234567899999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=306.68 Aligned_cols=251 Identities=17% Similarity=0.238 Sum_probs=191.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeecc-ccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|+||.||+|... .+..+++|++..... .......+.+.+|+.++++++||||+++++++.+......+++||
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e 86 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME 86 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence 478999999999999975 578899988754332 112233457889999999999999999999987654336789999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.....
T Consensus 87 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 87 YMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 999999999997544 489999999999999999999998 999999999999999999999999999876532111
Q ss_pred CCCC-cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPG-TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~-~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.... ....+...|+|||.+.+..++.++|||||||++|||+||+.||...... ......... +....+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--~~~~~~~~~---------~~~~~~ 230 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--AAIFKIATQ---------PTNPQL 230 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--HHHHHHhcC---------CCCCCC
Confidence 1111 1122345689999999888999999999999999999999999643211 111111100 001122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
+....+.+.+++ +||..+|++||+++||++
T Consensus 231 ~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 231 PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 333445566777 688899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=307.02 Aligned_cols=244 Identities=22% Similarity=0.312 Sum_probs=193.7
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||++.. .++.+|+|.+.... ..+.+.+|+.++++++|||++++++++.... .++|||
T Consensus 9 ~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---~~~v~e 78 (254)
T cd05083 9 TLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV------TAQAFLEETAVMTKLHHKNLVRLLGVILHNG---LYIVME 78 (254)
T ss_pred eeeeeeccCCCCceEeccc-CCCceEEEeecCcc------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC---cEEEEE
Confidence 4458999999999999975 56788998874321 2356889999999999999999999987643 589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 99999999999866555689999999999999999999998 99999999999999999999999999886532111
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....+..|+|||.+.+..++.++|||||||++|||++ |+.||..... .......... .. . ..
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~-~~------~---~~ 218 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--KEVKECVEKG-YR------M---EP 218 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhCC-CC------C---CC
Confidence 11122456899999988899999999999999999998 9999865432 1221111110 00 0 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 12334678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=312.92 Aligned_cols=259 Identities=17% Similarity=0.121 Sum_probs=191.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|++|.||+|+.. ++..+|+|++...... ....+.+.+|+.++++++||||+++++++.+++ ..++|||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 79 (285)
T cd07861 4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE--EGVPSTAIREISLLKELQHPNIVCLQDVLMQES--RLYLIFE 79 (285)
T ss_pred EeeEecccCceEEEEEEECCCCcEEEEEEecccccc--CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC--eEEEEEe
Confidence 3478999999999999986 5788999987543221 223356889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|++ ++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 997 68988886533 24689999999999999999999999 99999999999999999999999999987543221
Q ss_pred CCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcCCc----------
Q 006178 520 EKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLELPE---------- 586 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~~~---------- 586 (658)
. ......++..|+|||.+.+. .++.++|||||||++|||+||+.||.........+ .........
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 R--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred c--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence 1 11112235669999988654 57899999999999999999999997543211111 000000000
Q ss_pred ----ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 587 ----VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 587 ----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.................+.++.+++.+||+.||++|||+.+|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000011123456789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=308.64 Aligned_cols=240 Identities=18% Similarity=0.289 Sum_probs=183.3
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.||+|+||.||+|.... ...+++|.+... .....+.+.+|+.+++.++||||+++++++..+. ..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD--ES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC--Cc
Confidence 469999999999998753 123666655322 1233457889999999999999999999998876 67
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--------ceec
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--------PKLV 507 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~ 507 (658)
++||||+++|+|.++++.++. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +|++
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEec
Confidence 999999999999999976543 589999999999999999999999 9999999999999987765 5899
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCC-CCCCCCCCcHHHHHHHhhcCC
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGR-PPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~ 585 (658)
|||++...... ....++..|+|||++.+ ..++.++|||||||++|||++|. .|+....... ... .....
T Consensus 151 d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~-~~~~~ 221 (258)
T cd05078 151 DPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQ-FYEDR 221 (258)
T ss_pred ccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHH-HHHcc
Confidence 99987654221 11223456999999986 45899999999999999999995 5554322111 111 01000
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
...+.....++.+++.+||+.||++|||++++++.|+
T Consensus 222 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 -----------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -----------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0111122356889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=305.30 Aligned_cols=238 Identities=23% Similarity=0.329 Sum_probs=184.4
Q ss_pred ccccCCCCeeEEEEEecCCC-----------eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC
Q 006178 364 NIIGSSPDSLVYKGTMKGGP-----------EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~-----------~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 432 (658)
+.||+|+||.||+|.+.+.. .+++|.+.... .....+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 46899999999999987543 34555442221 115678999999999999999999999987 4
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-------Cce
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-------SPK 505 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-------~~k 505 (658)
..++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+|
T Consensus 74 -~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 74 -ENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred -CcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEE
Confidence 56999999999999999986543 589999999999999999999999 999999999999999887 799
Q ss_pred eccccchhhhhhcCCCCCCcccccCccccCCcccccC--CCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhh
Q 006178 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR--HLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYL 582 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 582 (658)
|+|||++...... ........|+|||++... .++.++|||||||++|||++ |..||...... .+.....
T Consensus 149 l~Dfg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~ 220 (259)
T cd05037 149 LSDPGIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQ 220 (259)
T ss_pred eCCCCcccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHh
Confidence 9999998765321 111233558999998876 78999999999999999999 57777543211 1111111
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
.... . .. .....+.+++.+||+.+|.+|||+.||++.|+
T Consensus 221 -~~~~--------~-~~--~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 -DQHR--------L-PM--PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -cCCC--------C-CC--CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 0 00 01156889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=311.73 Aligned_cols=246 Identities=18% Similarity=0.231 Sum_probs=196.9
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+||.+.||++...+.+.+|+|++.... .+.....-|.+|+..|.++ .|.+||++++|-..++ ..||||||
T Consensus 366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~--~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~--~lYmvmE~ 441 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE--ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG--YLYMVMEC 441 (677)
T ss_pred HHhhcCCCcceeeeeecCCCcchhhhHHHHhh--cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc--eEEEEeec
Confidence 37899999999999999988999999885543 3345567899999999999 6999999999998877 89999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
-+. ||..+|+++......| .++.+..|++.|+.++|.+ ||||.||||.|+|+- .|.+||+|||+|..+..+...
T Consensus 442 Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 442 GDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred ccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence 854 9999998776654556 7888999999999999999 999999999999995 568999999999988765554
Q ss_pred CCCcccccCccccCCcccccC-----------CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 522 NPGTLGSQGAICILPSSLEAR-----------HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~-----------~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
.......++.-||+||.+... ++++++||||+|||||+|+.|+.||..... .|. .+..
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n---~~a--------Kl~a 584 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN---QIA--------KLHA 584 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH---HHH--------HHHh
Confidence 444455667889999998532 356899999999999999999999953211 111 1223
Q ss_pred ccCCcC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 VVDPEL----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ~~~~~~----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.+|.- ...+.. .++.++++.||+.||.+||++.|+++.
T Consensus 585 I~~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hcCCCccccccCCCCc--hHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 333321 122222 228899999999999999999999875
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=306.12 Aligned_cols=248 Identities=17% Similarity=0.168 Sum_probs=190.1
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|.... +..+++|.+.... ....+.+.+|+++++.++||||+++++++...+ ..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~~v~e~ 83 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS----EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIEF 83 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC--EEEEEEEe
Confidence 4679999999999999875 5556666653222 223456889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 84 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (282)
T cd06643 84 CAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 159 (282)
T ss_pred cCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccc
Confidence 99999998876433 3689999999999999999999999 9999999999999999999999999998764322111
Q ss_pred CCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 522 NPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.....++..|+|||++. +..++.++|||||||++|||++|+.||...... .......... .+..
T Consensus 160 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~~-------~~~~ 228 (282)
T cd06643 160 --RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKSE-------PPTL 228 (282)
T ss_pred --cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--HHHHHHhhcC-------CCCC
Confidence 11223456799999974 455788999999999999999999998653321 1111111110 0000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
..+...+..+.+++.+||+.||.+||++.++++.-
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 229 -AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 11223346788999999999999999999987653
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=325.72 Aligned_cols=255 Identities=16% Similarity=0.148 Sum_probs=190.2
Q ss_pred hhhcccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||.||++... .+..|++|.+... +.+.+|++++++++||||+++++++.... ..+
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~ 162 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWKS--TVC 162 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeCC--EEE
Confidence 445588999999999999864 3456777776321 23468999999999999999999998777 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+|||++. ++|.+++... ..+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 163 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred EEehhcC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 9999995 6899988533 3599999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-----HHHHHHHhhcCCccccc-
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-----LVDWAKDYLELPEVMSY- 590 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~- 590 (658)
............++..|+|||++.+..++.++|||||||++|||++|+.||...... +....+.....+.....
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 332222222334567799999999999999999999999999999999999653321 11111111000000000
Q ss_pred --------------ccCCcCC--CC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 --------------VVDPELK--HF--SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 --------------~~~~~~~--~~--~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+... .. .......+.+++.+||..||++|||+.|++..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 00 01123467789999999999999999999876
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=309.48 Aligned_cols=251 Identities=21% Similarity=0.311 Sum_probs=192.1
Q ss_pred hcccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+++...+ +.+|+|.+...... ........+|+.++++++||||+++++++.+.. ..++|||
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~v~~ 78 (260)
T PF00069_consen 3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE--EEEREENIREIKILRRLRHPNIVQILDVFQDDN--YLYIVME 78 (260)
T ss_dssp EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH--HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS--EEEEEEE
T ss_pred EeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc--ccccchhhhhhhccccccccccccccccccccc--ccccccc
Confidence 457899999999999998754 57888887554322 222233456999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+..... .
T Consensus 79 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~ 151 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--N 151 (260)
T ss_dssp EETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS--T
T ss_pred ccccccccccccccc--cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--c
Confidence 999999999998332 489999999999999999999999 999999999999999999999999999865311 1
Q ss_pred CCCCcccccCccccCCcccc-cCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 KNPGTLGSQGAICILPSSLE-ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~-~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
........++..|+|||.+. +..++.++||||+|+++|+|++|..||..... +........... .... ...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~-----~~~- 224 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR-PLPS-----SSQ- 224 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT-HHHH-----HTT-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc-cccc-----ccc-
Confidence 11122233456799999998 78899999999999999999999999975521 111111111110 0000 000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
........+.+++.+||+.||++||++.|+++
T Consensus 225 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 225 QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00001267889999999999999999999875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=323.39 Aligned_cols=260 Identities=18% Similarity=0.159 Sum_probs=191.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~lv 438 (658)
.+.||+|+||.||++... +++.||+|++..... .....+++.+|+++++.++||||+++++++...+. ...++|
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 82 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV 82 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEecccccc--chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence 378999999999999975 688999998743321 12234578899999999999999999999876541 157999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+. ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 83 ~e~~~-~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 83 TELMQ-SDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred eeccc-cCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 99996 58888886543 589999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCcc---------
Q 006178 519 SEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPEV--------- 587 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~--------- 587 (658)
... ......++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ....+......+..
T Consensus 157 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 157 ESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred ccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 111 11122345679999998874 5799999999999999999999999754321 11111111000000
Q ss_pred -ccccc----C-Cc---CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 -MSYVV----D-PE---LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 -~~~~~----~-~~---~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+. . +. .........+++.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 236 ARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000 0 00 001112234668899999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=310.73 Aligned_cols=256 Identities=17% Similarity=0.196 Sum_probs=192.0
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||++.+.. +..+|+|.+.... ......++.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 79 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG--EISICME 79 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--EEEEEee
Confidence 34789999999999999764 5556666653221 1233456889999999999999999999998877 8899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.++++... .+++..+..++.|+++||+|||+.+ +++||||||+||++++++.+||+|||++.......
T Consensus 80 y~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 80 HMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred ccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 999999999997553 4899999999999999999999732 89999999999999999999999999886543211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc----------
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY---------- 590 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 590 (658)
.....++..|+|||.+.+..++.++|||||||++|||+||+.||...... .+.............
T Consensus 155 ---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 155 ---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCC
Confidence 11123456799999998888999999999999999999999998643311 111111000000000
Q ss_pred ----------------ccCCcCCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 591 ----------------VVDPELKHFS-YDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 591 ----------------~~~~~~~~~~-~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
.........+ ...+..+.+++.+||+.+|++|||+.|+++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000 11345688999999999999999999998874
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=305.53 Aligned_cols=249 Identities=18% Similarity=0.218 Sum_probs=190.8
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. +++.+|+|.+..... .....+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 12 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~--~~~lv~ 85 (267)
T cd06645 12 ELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG----EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD--KLWICM 85 (267)
T ss_pred HHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC--EEEEEE
Confidence 34578999999999999975 567788887643321 22345788999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++...+ .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 86 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 86 EFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred eccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 9999999999987554 489999999999999999999999 99999999999999999999999999987553221
Q ss_pred CCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. .....++..|+|||.+. ...++.++|||||||++|||++|+.||.........+... .. . ...+..
T Consensus 161 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~--~~-~----~~~~~~ 231 (267)
T cd06645 161 AK--RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT--KS-N----FQPPKL 231 (267)
T ss_pred cc--cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh--cc-C----CCCCcc
Confidence 11 12223456799999874 4568899999999999999999999986433221111110 00 0 000111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.. ....+..+.+++.+||+.+|++||+++++++
T Consensus 232 ~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 KD-KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cc-cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 10 0122356789999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=322.06 Aligned_cols=243 Identities=20% Similarity=0.119 Sum_probs=183.9
Q ss_pred ccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc---cCCCccceeeEEecCCCCceEEEEEe
Q 006178 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
||+|+||.||+|+.. +++.+|+|.+..+... .......+..|..++.+. +||||+++++++.+.+ ..++||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~--~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-AKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS--DLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-hhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC--eEEEEEcC
Confidence 799999999999976 5788999987543221 112233455677777665 6999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++........
T Consensus 78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~ 152 (330)
T cd05586 78 MSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT 152 (330)
T ss_pred CCCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC
Confidence 99999999987544 489999999999999999999999 9999999999999999999999999998753222111
Q ss_pred CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||++.+. .++.++|||||||++|||+||+.||..... .+........... +. .
T Consensus 153 --~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--~~~~~~i~~~~~~--------~~--~ 218 (330)
T cd05586 153 --TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--QQMYRNIAFGKVR--------FP--K 218 (330)
T ss_pred --ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--HHHHHHHHcCCCC--------CC--C
Confidence 1122345679999998764 489999999999999999999999965432 1211111111000 00 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPS----MQELCT 630 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs----~~evl~ 630 (658)
...+..+.+++.+||+.||.+||+ +.|+++
T Consensus 219 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 112356779999999999999984 555554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=303.25 Aligned_cols=246 Identities=17% Similarity=0.251 Sum_probs=195.2
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
++.+.||+|+||.||+|+..+ +..+++|.+..... .+++.+|++++++++||||+++++++.+.. ..++++
T Consensus 6 ~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~ 77 (256)
T cd06612 6 DILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------LQEIIKEISILKQCDSPYIVKYYGSYFKNT--DLWIVM 77 (256)
T ss_pred hhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------HHHHHHHHHHHHhCCCCcEeeeeeeeecCC--cEEEEE
Confidence 345789999999999999875 67888887743211 467999999999999999999999998876 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 78 EYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred ecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 9999999999987533 3689999999999999999999999 99999999999999999999999999988654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......+...|++||++.+..++.++|||||||++|||+||+.||........ . .... . ...+. ...
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-~-~~~~---~----~~~~~-~~~ 221 (256)
T cd06612 154 A--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-I-FMIP---N----KPPPT-LSD 221 (256)
T ss_pred c--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-h-hhhc---c----CCCCC-CCc
Confidence 1 11222345569999999988999999999999999999999999864322111 0 0000 0 00001 112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
+......+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 222 PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 2334567889999999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=319.77 Aligned_cols=255 Identities=17% Similarity=0.154 Sum_probs=189.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~l 437 (658)
.+.||+|+||.||++... .++.+|+|++..... .....+.+.+|+.+++.++||||+++++++..... ...++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 99 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYL 99 (355)
T ss_pred EEEeeecCCEEEEEEEecCCCceEEEEEeCCccc--ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEE
Confidence 488999999999999975 577899998754322 22334567899999999999999999998864331 24699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++ ++.+.+.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 100 v~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 100 VMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred Ehhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 9999965 77777653 388999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHH-----------------
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD----------------- 580 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~----------------- 580 (658)
.. ......++..|+|||.+.+..++.++|||||||++|||++|+.||...+. ...+...
T Consensus 172 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 172 SF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred cc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhcH
Confidence 11 11122345679999999999999999999999999999999999975431 1111100
Q ss_pred ----hhcCCccccccc-----CCcC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 581 ----YLELPEVMSYVV-----DPEL----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 581 ----~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
............ .... ..........+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000000 0000 01111234567899999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=305.41 Aligned_cols=249 Identities=18% Similarity=0.210 Sum_probs=197.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+++.. +++.+++|++..... .....+++.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd08218 4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEENG--NLYIVMD 79 (256)
T ss_pred EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC--eEEEEEe
Confidence 4578999999999999975 578899998754322 1233457899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.......+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 99999999999765444689999999999999999999999 999999999999999999999999998876432211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....+...|+|||+..+..++.++|||||||++|||+||+.||.... .......... ......+
T Consensus 157 ~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~--~~~~~~~~~~----------~~~~~~~ 222 (256)
T cd08218 157 L--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN--MKNLVLKIIR----------GSYPPVS 222 (256)
T ss_pred h--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC--HHHHHHHHhc----------CCCCCCc
Confidence 1 111223456899999998889999999999999999999999986432 2222211111 1111122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.+|++||++.||++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 3345678899999999999999999999873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=306.75 Aligned_cols=248 Identities=18% Similarity=0.222 Sum_probs=201.9
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+++++.||+|.|..|-.|++- .|..||||.+.+.... ......+.+|++.|+-++|||||++|.+..... ..|||
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD--~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT--KlyLi 95 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD--TLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT--KLYLI 95 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc--hhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc--eEEEE
Confidence 455678999999999999975 7889999998654422 334556889999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceeccccchhhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~ 517 (658)
+|+-++|+|+|||.++.. .+.+.-..+++.||+.|+.|+|+. ++|||||||+||.+- .-|-+||.|||++-.+..
T Consensus 96 LELGD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EEecCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999999987654 599999999999999999999999 999999999998875 457899999999877643
Q ss_pred cCCCCCCcccccCccccCCcccccCCCC-ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLD-VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~-~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... -...++...|-|||++.+..|+ ++.||||+|||||.|+.|++||....+. +.+..++|-..
T Consensus 172 G~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS------------ETLTmImDCKY 236 (864)
T KOG4717|consen 172 GKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS------------ETLTMIMDCKY 236 (864)
T ss_pred cch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch------------hhhhhhhcccc
Confidence 322 1223445668899999999987 6899999999999999999999653322 11122222221
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..|.....++.+||.+||..||++|.+.+||+..
T Consensus 237 -tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 237 -TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred -cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2456677889999999999999999999998764
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=312.48 Aligned_cols=258 Identities=19% Similarity=0.207 Sum_probs=191.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--~~~lv~e 84 (301)
T cd07873 10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFE 84 (301)
T ss_pred EeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc---CchhHHHHHHHHHHhcCCCCcceEEEEEecCC--eEEEEEe
Confidence 3478999999999999986 5678888887543221 12345778999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ ++|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 85 ~~~-~~l~~~l~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 85 YLD-KDLKQYLDDCGN-SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred ccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 996 599998875433 589999999999999999999999 999999999999999999999999999875432211
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--cccccccC---
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMSYVVD--- 593 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~--- 593 (658)
. ......+..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...........+ .......+
T Consensus 160 ~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 160 T--YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred c--ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 1 111223567999998865 45789999999999999999999999754321 111111111110 00000000
Q ss_pred ------CcCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 ------PELK-----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ------~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+... ......+..+.+++.+|++.||.+|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 0111234567899999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=317.01 Aligned_cols=254 Identities=14% Similarity=0.156 Sum_probs=190.3
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.++||+|+||.||+++.+. ++.+|+|.+.... .........+.+|+.++..++|+||+++++++.+.+ ..++|||
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-MLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN--NLYLVMD 81 (332)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--EEEEEEe
Confidence 34889999999999999875 5567777764322 112223445888999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.+... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 82 y~~~g~L~~~l~~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 82 YYVGGDLLTLLSKFED-RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred ccCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 9999999999975332 589999999999999999999999 999999999999999999999999999875432211
Q ss_pred CCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.......++..|+|||++. ...++.++|||||||++|||++|+.||.... ..+............ .
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~--~~~~~~~i~~~~~~~------~ 228 (332)
T cd05623 158 -VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHKERF------Q 228 (332)
T ss_pred -ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCCccc------c
Confidence 1112233566799999986 3468899999999999999999999997543 222222221111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
........+..+.+++.+|+..++.+ |+++.|+++.
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11111233466789999988665544 6899998876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=303.35 Aligned_cols=255 Identities=18% Similarity=0.246 Sum_probs=193.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc------chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW------TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~------~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.||+|+||.||+|... +++.+|+|.+....... .....+.+.+|+.++++++|||++++++++...+ ..
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 83 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE--YL 83 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC--ce
Confidence 368999999999999865 57889999875432111 1112346888999999999999999999998876 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++.+.. .+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 84 SIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred EEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999999997653 589999999999999999999999 9999999999999999999999999998764
Q ss_pred hhcCCCCCCcccccCccccCCcccccCC--CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
.............+...|+|||.+.... ++.++||||||+++||+++|..||...... ..... .... . ......
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~-~~~~-~-~~~~~~ 234 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-AAMFK-LGNK-R-SAPPIP 234 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-HHHHH-hhcc-c-cCCcCC
Confidence 3221111111223345689999987654 889999999999999999999999643321 11111 1100 0 000011
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ......+..+.+++.+||+.+|++||++.||++.
T Consensus 235 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 235 P---DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred c---cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1 1112345678899999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=304.22 Aligned_cols=250 Identities=25% Similarity=0.378 Sum_probs=196.0
Q ss_pred hcccccCCCCeeEEEEEecC-----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+++..+ +..+|+|.+..... ....+.+..|++++++++|+||+++++++.+.+ ..+
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~ 77 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD---EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE--PLM 77 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC---hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--eeE
Confidence 34789999999999999864 36788887743221 124567899999999999999999999998876 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
++|||+++++|.+++.......+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 999999999999999765443389999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
....... .....+..|+|||...+..++.++||||+|+++|||++ |+.||..... .......... .
T Consensus 155 ~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~-~--------- 221 (258)
T smart00219 155 DDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKG-Y--------- 221 (258)
T ss_pred ccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcC-C---------
Confidence 3321111 11224467999999988889999999999999999999 7888864322 1111111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
....+...+..+.+++.+|++.||++|||+.|+++.|
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0111222456788999999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=330.04 Aligned_cols=253 Identities=22% Similarity=0.273 Sum_probs=209.3
Q ss_pred ccccCCCCeeEEEEEe-cCCC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 364 NIIGSSPDSLVYKGTM-KGGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~-~~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
++||+|+||+||||.+ +.|+ +||+|.+.... .....+++..|+-+|.+++|||+++++|+|.... ..||
T Consensus 702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t---~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~qlv 775 (1177)
T KOG1025|consen 702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT---SPKASIELLDEALRMASLDHPNLLRLLGVCMLST---LQLV 775 (1177)
T ss_pred ceeccccceeEEeeeEecCCceecceeEEEEeeccC---CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---HHHH
Confidence 7899999999999986 3443 67777664332 2234567999999999999999999999998764 5799
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
++||+.|+|.|+++.++. .+-.+..+.|+.|||+||.|||.+ ++|||||-.+|||+.....+||.|||+|+.+...
T Consensus 776 tq~mP~G~LlDyvr~hr~-~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRD-NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHhcccchHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 999999999999987544 688899999999999999999999 9999999999999999999999999999998766
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
........+.....|||-|.+....|+.++|||||||++||++| |..|+.+.... -+...++. ++..
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~---eI~dlle~---------geRL 919 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE---EIPDLLEK---------GERL 919 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH---HhhHHHhc---------cccC
Confidence 65555555666777999999999999999999999999999999 99998654321 11122222 2223
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
..|+.++..+..++.+||..|+..||+++++...+.++...
T Consensus 920 sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 920 SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 45667778899999999999999999999999999876543
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=297.37 Aligned_cols=249 Identities=17% Similarity=0.147 Sum_probs=197.1
Q ss_pred ccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|.-|+||.+++++. ..+|+|.+.+.. ........+...|-+||+.++||.++.+|+.++.+. ..|+|||||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~-l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~--~~cl~meyC 159 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKES-LASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK--YSCLVMEYC 159 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHH-HhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc--eeEEEEecC
Confidence 6899999999999999865 677777775443 223344567788999999999999999999999988 889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC---
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS--- 519 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~--- 519 (658)
+||+|..+.+++....+++..++-++.+|+-||+|||.. |||.|||||+||||-++|++-|+||.++.......
T Consensus 160 pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~ 236 (459)
T KOG0610|consen 160 PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV 236 (459)
T ss_pred CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence 999999999988878899999999999999999999999 99999999999999999999999999876432100
Q ss_pred ------------------------------CC---------------------CCCcccccCccccCCcccccCCCCccc
Q 006178 520 ------------------------------EK---------------------NPGTLGSQGAICILPSSLEARHLDVQG 548 (658)
Q Consensus 520 ------------------------------~~---------------------~~~~~~~~~~~~~aPE~~~~~~~~~ks 548 (658)
.. .......++-.|.|||++.+...+.++
T Consensus 237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV 316 (459)
T KOG0610|consen 237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV 316 (459)
T ss_pred ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence 00 000012235569999999999999999
Q ss_pred cchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCC---
Q 006178 549 NIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPS--- 624 (658)
Q Consensus 549 DVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs--- 624 (658)
|.|+|||++|||+.|..||.+...... +..++...+. ...+..+..+.+||++.|.+||++|..
T Consensus 317 DWWtfGIflYEmLyG~TPFKG~~~~~T------------l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~r 384 (459)
T KOG0610|consen 317 DWWTFGIFLYEMLYGTTPFKGSNNKET------------LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKR 384 (459)
T ss_pred hHHHHHHHHHHHHhCCCCcCCCCchhh------------HHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhcccc
Confidence 999999999999999999976543211 1111111111 011245567889999999999999987
Q ss_pred -HHHHHH
Q 006178 625 -MQELCT 630 (658)
Q Consensus 625 -~~evl~ 630 (658)
+.||-+
T Consensus 385 GA~eIK~ 391 (459)
T KOG0610|consen 385 GAAEIKR 391 (459)
T ss_pred chHHhhc
Confidence 666644
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=319.45 Aligned_cols=256 Identities=17% Similarity=0.157 Sum_probs=189.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
+.+.||+|+||.||++... .++.+|+|++..... .....+.+.+|+.+++.++||||+++++++..... ...+
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~ 105 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc--CchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEE
Confidence 3488999999999999976 577899998754322 12234567899999999999999999998764321 2469
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 106 lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 106 IVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred EEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 99999965 78877753 378999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh--hcCC---------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--LELP--------- 585 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~--------- 585 (658)
... ......++..|+|||++.+..++.++|||||||++|||+||+.||...+. ...+.... ...+
T Consensus 178 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 253 (364)
T cd07875 178 TSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFMKKLQ 253 (364)
T ss_pred CCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHhhh
Confidence 211 11222345679999999999999999999999999999999999965431 11111100 0000
Q ss_pred ----------cccc-----ccc----CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 ----------EVMS-----YVV----DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 ----------~~~~-----~~~----~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.... ... .+............+.+++.+|++.||.+|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 000 000000111123567899999999999999999999885
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=302.73 Aligned_cols=248 Identities=20% Similarity=0.256 Sum_probs=195.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecc-ccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|... ++..+++|.+..... .......+.+.+|+.++++++|+||+++++++.+.. ..+++|
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~ 81 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED--NLYIFL 81 (258)
T ss_pred ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC--eEEEEE
Confidence 3478999999999999987 788899998765432 222334567899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 82 ELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 9999999999997553 489999999999999999999999 99999999999999999999999999887653222
Q ss_pred CCCCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
......+...|++||.+.... ++.++|+|||||++|||++|+.||...... ......... .....
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~---------~~~~~ 222 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV--AAVFKIGRS---------KELPP 222 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH--HHHHHHHhc---------ccCCC
Confidence 111222456689999987766 899999999999999999999999654311 111111100 01111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+......+.+++.+||+.+|++||++.++++
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 22234466789999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=304.17 Aligned_cols=243 Identities=15% Similarity=0.217 Sum_probs=189.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.+|+|.+.... .....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 79 (279)
T cd06619 5 YQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN--RISICTE 79 (279)
T ss_pred heeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC--EEEEEEe
Confidence 4478999999999999975 56788888774321 2233457899999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++..+....
T Consensus 80 ~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 80 FMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred cCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 99999997653 378899999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-----HHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-----VDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.....++..|+|||++.+..++.++||||||+++|||+||+.||....... ..+....... ..+.
T Consensus 150 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 219 (279)
T cd06619 150 ---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-------DPPV 219 (279)
T ss_pred ---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-------CCCC
Confidence 111234567999999999899999999999999999999999996422110 1111110000 0011
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ....+.++.+++.+||+.+|++||+++|+++.
T Consensus 220 ~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 220 LP--VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CC--CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 10 11233567899999999999999999999876
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=306.82 Aligned_cols=251 Identities=17% Similarity=0.209 Sum_probs=194.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
++.+.||+|+||.||++... .+..+|+|.+.... .......+.+|++++++++||||+++++++...+ ..++||
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ 78 (286)
T cd06622 4 EVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG--AVYMCM 78 (286)
T ss_pred hhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC--eEEEEE
Confidence 34578999999999999986 67889998875321 1223457889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 440 DYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ +|+||||||+||+++.++.+||+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 9999999999987532 235899999999999999999999632 8999999999999999999999999998765322
Q ss_pred CCCCCCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 519 SEKNPGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
. .....+...|+|||.+.+. .++.++|||||||++|||+||+.||....... ..... ..+.
T Consensus 157 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~-------~~~~ 223 (286)
T cd06622 157 L----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQL-------SAIV 223 (286)
T ss_pred c----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHH-------HHHh
Confidence 1 1122344568999998654 35889999999999999999999996433211 11110 0111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+......+...+..+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 224 DGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 111122334456778899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=305.93 Aligned_cols=244 Identities=21% Similarity=0.268 Sum_probs=192.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|.+. ++..+|+|.+..... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT--KLWIIMEY 83 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc---hHHHHHHHHHHHHHHcCCCCccHhhhcccccCC--ceEEEEEc
Confidence 367999999999999876 466788877643221 223457899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++..+ .+++..+..++.|+++|++|||++ +++|+||+|+||++++++.+||+|||++..+.....
T Consensus 84 ~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06642 84 LGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred cCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence 9999999998643 489999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
......+...|+|||++.+..++.++|||||||++|||+||+.||......... .. .. .......+.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~-~~---------~~~~~~~~~ 223 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL--FL-IP---------KNSPPTLEG 223 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH--hh-hh---------cCCCCCCCc
Confidence 111122345689999999888999999999999999999999998643221111 00 00 000111222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.+|++||++.|+++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 345678899999999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=319.41 Aligned_cols=251 Identities=15% Similarity=0.163 Sum_probs=189.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+++.. +++.+|+|.+..... ........+.+|+.++.+++||||+++++.+.+.+ ..++||||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~~lv~E~ 82 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM-LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR--NLYLIMEF 82 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEeC
Confidence 478999999999999986 577888888753321 12233457889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 83 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 83 LPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred CCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 99999999997554 489999999999999999999999 9999999999999999999999999998754321100
Q ss_pred ---------------------------------CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 522 ---------------------------------NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 522 ---------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
.......++..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 00011235667999999999999999999999999999999999997
Q ss_pred CCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 006178 569 KDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPS---MQELCTM 631 (658)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs---~~evl~~ 631 (658)
..... ............. ...+. . ..+.++.+++.+|+ .||.+|++ +.|+++.
T Consensus 238 ~~~~~--~~~~~i~~~~~~~--~~p~~-~----~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 238 SETPQ--ETYRKVMNWKETL--VFPPE-V----PISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCHH--HHHHHHHcCCCce--ecCCC-C----CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 54322 1111111110000 01111 0 12355778888876 49999985 5666554
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=315.06 Aligned_cols=254 Identities=18% Similarity=0.162 Sum_probs=190.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+++.. +++.+|+|.+.... .......+.+.+|+.++..++|+||+++++++.+.+ ..++|||
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (331)
T cd05597 5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-MLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN--NLYLVMD 81 (331)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-HhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC--eEEEEEe
Confidence 4588999999999999976 47788888875322 112233456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.+.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++..+.....
T Consensus 82 ~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 82 YYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred cCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 999999999997532 2589999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
. ......++..|+|||++.. ..++.++|||||||++|||++|+.||..... .+............ .
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~--~~~~~~i~~~~~~~------~ 228 (331)
T cd05597 158 V-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHKEHF------Q 228 (331)
T ss_pred c-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH--HHHHHHHHcCCCcc------c
Confidence 1 1122235667999999863 4578899999999999999999999965432 22211111111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCC--CCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDIT--KRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~--~RPs~~evl~~ 631 (658)
........+..+.+++.+|+..+++ .||++.++++.
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1111112345677888887765443 37899988876
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=302.36 Aligned_cols=248 Identities=18% Similarity=0.195 Sum_probs=195.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||++... ++..+|+|.+..... .....+.+.+|++++++++||||+++++.+...+ ..++|||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM--TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK--ALMIVME 79 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC--EEEEEEe
Confidence 4478999999999999975 567888888754322 2234567899999999999999999999988776 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~ 519 (658)
|+++++|.+++.......+++..+..++.|+++||+|||++ +++|+||||+||+++++ +.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999999865555689999999999999999999999 99999999999999865 468999999987653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. .....+...|+|||.+.+..++.++||||||+++|+|++|+.||...... ......... .....
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~----------~~~~~ 221 (256)
T cd08220 157 K---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMSG----------TFAPI 221 (256)
T ss_pred c---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHhc----------CCCCC
Confidence 1 11123455799999999888999999999999999999999998654321 111111111 11112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.+|++|||+.|+++.
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 22344568899999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=315.46 Aligned_cols=246 Identities=19% Similarity=0.228 Sum_probs=197.8
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||.|+||.||-|++. +...||+||+....+.. .....++.+|+..|++++|||+|.+.|+|.... ..|||||||
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs-~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--TaWLVMEYC 108 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-NEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--TAWLVMEYC 108 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeecccccccc-HHHHHHHHHHHHHHHhccCCCcccccceeeccc--hHHHHHHHH
Confidence 57999999999999975 56788899886544332 234567999999999999999999999998776 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
- ||-.|++.-..+ ++-+.++..|+.+.+.||+|||+. +.||||||..|||+++.|.+||+|||.|.....
T Consensus 109 l-GSAsDlleVhkK-plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 109 L-GSASDLLEVHKK-PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred h-ccHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 4 588888764433 689999999999999999999999 999999999999999999999999998876532
Q ss_pred CCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 523 PGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....+++.|||||++. .+.|+-|+||||+||+..||.-.++|+.....- ..... +...-.|.+.
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-SALYH--------IAQNesPtLq-- 246 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYH--------IAQNESPTLQ-- 246 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-HHHHH--------HHhcCCCCCC--
Confidence 22345678899999986 478999999999999999999999997543211 11101 1111223332
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
..+++..+++++..||++-|.+|||.+++++.---
T Consensus 247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv 281 (948)
T KOG0577|consen 247 SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV 281 (948)
T ss_pred CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence 45678889999999999999999999999876443
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=302.08 Aligned_cols=252 Identities=16% Similarity=0.179 Sum_probs=194.2
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|+||.||+|... ++..|++|.+...... ......+.+.+|+.++++++||||+++++++.+......+++||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 478999999999999975 5788999987543221 12233457889999999999999999999987654336789999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+.+++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++.......
T Consensus 87 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 87 HMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred ecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 999999999987543 478999999999999999999999 999999999999999999999999999876532111
Q ss_pred CC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. ......++..|+|||.+.+..++.++|||||||++|||++|+.||...... ... ..... .+.....
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~-~~~~~---------~~~~~~~ 230 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-AAI-FKIAT---------QPTNPVL 230 (265)
T ss_pred cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-HHH-HHHhc---------CCCCCCC
Confidence 11 111223455699999998888999999999999999999999999643211 111 11110 1111123
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+......+.+++.+|+. +|++||+++||++.
T Consensus 231 ~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 231 PPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 44555678899999995 99999999998753
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=300.81 Aligned_cols=249 Identities=20% Similarity=0.225 Sum_probs=194.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|... +++.+++|.+...... ..+.+.+|++++++++||||+++++++.+.+ ..+++||
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~l~~e 80 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD----DFEIIQQEISMLKECRHPNIVAYFGSYLRRD--KLWIVME 80 (262)
T ss_pred EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh----hHHHHHHHHHHHHhCCCCChhceEEEEEeCC--EEEEEEe
Confidence 4578999999999999976 4667888877543221 3467889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... ..+++.++..++.|++.||+|||++ +++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 81 YCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 999999999987542 3589999999999999999999999 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCcccccC---CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 521 KNPGTLGSQGAICILPSSLEAR---HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~---~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.. ....+...|+|||.+.+. .++.++||||||+++|||+||+.||.............. . ...+...
T Consensus 157 ~~--~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~----~----~~~~~~~ 226 (262)
T cd06613 157 KR--KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK----S----NFPPPKL 226 (262)
T ss_pred cc--ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----c----cCCCccc
Confidence 11 112234568999998876 889999999999999999999999965432111110000 0 0011111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
......+..+.+++.+||+.+|.+|||+.+|+.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 123345667899999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=339.87 Aligned_cols=254 Identities=16% Similarity=0.178 Sum_probs=190.8
Q ss_pred hhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++.. +..+|+|.+..... .......|..|+.++++++|||||+++++|.+......+||
T Consensus 15 YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l--~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL--KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence 4455899999999999999875 45666666643321 22345678999999999999999999999876544468999
Q ss_pred EEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCC----CCeeeccCCCcceeecCC-----------
Q 006178 439 FDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELG----PPFTISELNSSAVYLTED----------- 501 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~----~~ivHrDlkp~NILl~~~----------- 501 (658)
|||+++|+|.++|.... ...+++..++.|+.||+.||+|||+... .+||||||||+||||+.+
T Consensus 93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~ 172 (1021)
T PTZ00266 93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA 172 (1021)
T ss_pred EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence 99999999999997421 2359999999999999999999998521 259999999999999642
Q ss_pred ------CCceeccccchhhhhhcCCCCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCc
Q 006178 502 ------FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN 573 (658)
Q Consensus 502 ------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~ 573 (658)
..+||+|||++..+..... .....++..|+|||++.+ ..++.++||||||||+|||+||+.||.... .
T Consensus 173 ~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-~ 248 (1021)
T PTZ00266 173 NNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-N 248 (1021)
T ss_pred cccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-c
Confidence 3489999999876532211 122235677999999864 458999999999999999999999996433 2
Q ss_pred HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...........+ .+. ....+..+.+||..||+.+|.+||++.|++.
T Consensus 249 ~~qli~~lk~~p---------~lp--i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 FSQLISELKRGP---------DLP--IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHHHhcCC---------CCC--cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 222222211111 000 0112356889999999999999999999984
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=306.84 Aligned_cols=258 Identities=19% Similarity=0.212 Sum_probs=192.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|++...... ....+.+.+|++++++++|+||+++++++.... ..++|||
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~e 80 (286)
T cd07847 5 KLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD--PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR--KLHLVFE 80 (286)
T ss_pred eeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC--ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC--EEEEEEe
Confidence 4478999999999999987 5788999987543321 223456789999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|..++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999988888775433 489999999999999999999999 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH-HHHhh-cC----------Ccc
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW-AKDYL-EL----------PEV 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~-~~~~~-~~----------~~~ 587 (658)
.. ....+...|+|||.+.+ ..++.++|||||||++|||+||+.||.........+ ..... .. ...
T Consensus 156 ~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 156 DY--TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred cc--cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 11 11223456899999876 558899999999999999999999997544221111 11100 00 000
Q ss_pred cccccCCcCCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 MSYVVDPELKHF------SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 ~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
......+..... ....+..+.+++.+||+.+|++||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000110000 0123467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=303.70 Aligned_cols=251 Identities=21% Similarity=0.234 Sum_probs=197.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||.|+||.||++... ++..+|+|.+..... .....+++.+|++++++++||||+++++++........+++||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 4 VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM--TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred eeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 3478999999999999975 567788887754322 2334567889999999999999999999887654446799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhh-----hcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLH-----TELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 441 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH-----~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
|+++++|.+++... ....+++..++.++.|++.||+||| +. +++|+||||+||++++++.+||+|||++.
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccccc
Confidence 99999999998643 2346899999999999999999999 66 99999999999999999999999999988
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
......... ....+...|++||.+.+..++.++||||||+++|+|++|+.||.... ......... .
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~----------~ 224 (265)
T cd08217 159 ILGHDSSFA--KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIK----------E 224 (265)
T ss_pred cccCCcccc--cccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHh----------c
Confidence 764322211 11234566899999998889999999999999999999999997543 222211111 1
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+...+..+.+++.+|++.+|++||++.||++.
T Consensus 225 ~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 225 GKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11222334455778899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=318.98 Aligned_cols=188 Identities=14% Similarity=0.160 Sum_probs=154.4
Q ss_pred hhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|+... +..||+|.... .....|+.++++++||||+++++++.... ..++|
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 135 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK----------GTTLIEAMLLQNVNHPSVIRMKDTLVSGA--ITCMV 135 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc----------cccHHHHHHHHhCCCCCCcChhheEEeCC--eeEEE
Confidence 3445899999999999999875 45676665311 12346999999999999999999998877 77999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+. ++|.+++..... .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~~-~~l~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSR-PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred EEccC-CcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 99995 699998875433 689999999999999999999999 9999999999999999999999999998743211
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
. ......++..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 P---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred c---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1 111123456799999999999999999999999999999965554
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=304.37 Aligned_cols=251 Identities=18% Similarity=0.301 Sum_probs=192.2
Q ss_pred ccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.||+|+||.||+|+.+. .+.+++|.+.... .....+.+.+|++++++++|+||+++++++.+.+ ..++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 85 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--PHYM 85 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC--cceE
Confidence 689999999999999652 3467777653221 1223467899999999999999999999998876 6799
Q ss_pred EEEecCCCChhhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 438 VFDYASNGTLYEHLHYGER-------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccc
Confidence 9999999999999975441 2589999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
+++...... .........+..|++||.+.+..++.++||||||+++|||++ |..||...... ......... . ..
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~~-~-~~ 237 (275)
T cd05046 163 LSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQAG-K-LE 237 (275)
T ss_pred cccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHcC-C-cC
Confidence 886542211 111111123455999999988889999999999999999999 78898543221 111111100 0 00
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
. ..+...+..+.+++.+||+.+|++|||+.|+++.|.+
T Consensus 238 -~------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 238 -L------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -C------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 0 0112234578899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=304.53 Aligned_cols=248 Identities=19% Similarity=0.177 Sum_probs=190.9
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+... +..+++|.+.... ....+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 16 i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 89 (292)
T cd06644 16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG--KLWIMIE 89 (292)
T ss_pred hhheecCCCCeEEEEEEECCCCceEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC--eEEEEEe
Confidence 44789999999999999865 6778887764332 233567889999999999999999999998777 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|..++.+.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 90 ~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 90 FCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred cCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 999999988876443 2589999999999999999999999 999999999999999999999999998765322211
Q ss_pred CCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
. .....+...|+|||++. ...++.++|||||||++|||+||+.||...... .......... .+.
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~-------~~~ 234 (292)
T cd06644 166 R--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKSE-------PPT 234 (292)
T ss_pred c--cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--HHHHHHhcCC-------Ccc
Confidence 1 11223446799999985 345788999999999999999999998643321 1111111110 001
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ..+...+..+.+++.+||+.+|++||++.|+++.
T Consensus 235 ~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 235 L-SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred C-CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 1122334568899999999999999999999763
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=315.30 Aligned_cols=254 Identities=15% Similarity=0.137 Sum_probs=190.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+++.. +++.+|+|.+.... .........+.+|..++..++|+||+++++++.+.+ ..++|||
T Consensus 5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~--~~~lv~E 81 (331)
T cd05624 5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-MLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN--YLYLVMD 81 (331)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEe
Confidence 4478999999999999986 46678888774322 112233456888999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 82 y~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 82 YYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred CCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999999997533 2589999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
. ......++..|+|||++.+ +.++.++|||||||++|||+||+.||..... .+............ .
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--~~~~~~i~~~~~~~------~ 228 (331)
T cd05624 158 V-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHEERF------Q 228 (331)
T ss_pred e-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH--HHHHHHHHcCCCcc------c
Confidence 1 1112335667999999875 5688999999999999999999999965432 11111111111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
........+..+.+++.+|+..++.+ |++++++++.
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11111123466889999999876544 4678888754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=314.33 Aligned_cols=255 Identities=19% Similarity=0.172 Sum_probs=187.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~l 437 (658)
.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++..... ...++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 97 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYL 97 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEE
Confidence 478999999999999975 567899998753321 12234567799999999999999999998864321 24689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
++|++ +++|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 98 ~~~~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 98 VTNLM-GADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred EeecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 99998 77999887633 489999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcC-Cccccccc-
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLEL-PEVMSYVV- 592 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~- 592 (658)
.. ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... +..+....... ......+.
T Consensus 171 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07878 171 EM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS 245 (343)
T ss_pred Cc-----CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcch
Confidence 11 12234567999999877 56899999999999999999999999654311 11111000000 00000000
Q ss_pred ------CCcCCCCC--------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 ------DPELKHFS--------YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ------~~~~~~~~--------~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+...+ ......+.+++.+|++.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 246 EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000011 1122457799999999999999999999965
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=306.43 Aligned_cols=246 Identities=18% Similarity=0.255 Sum_probs=194.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||.|+||.||+|... +++.+++|.+..... ...+.+.+|+.+++.++||||+++++++...+ ..++|||
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 96 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ----PKKELIINEILVMKELKNPNIVNFLDSFLVGD--ELFVVME 96 (296)
T ss_pred EEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC----chHHHHHHHHHHHHhcCCCceeeeeeeEecCc--eEEEEEE
Confidence 3478999999999999864 678899998754322 22456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++... .+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 97 YLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred ecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999999998643 489999999999999999999999 999999999999999999999999999876533221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....+...|+|||.+.+..++.++|||||||++|||+||+.||...... ... ....... .. .. ..+
T Consensus 171 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~-~~~-~~~~~~~--~~-----~~-~~~ 238 (296)
T cd06655 171 K--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-RAL-YLIATNG--TP-----EL-QNP 238 (296)
T ss_pred c--CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHH-HHHHhcC--Cc-----cc-CCc
Confidence 1 11123445699999999888999999999999999999999999654321 111 1111000 00 00 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||..||++||++.++++.
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 2334568899999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=329.07 Aligned_cols=253 Identities=12% Similarity=0.124 Sum_probs=181.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC------CCccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH------ENTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H------~nIv~l~~~~~~~~~~~ 434 (658)
+.++||+|+||+||+|.+. .++.||||++..... ..+.+..|++++++++| .+++++++++..... +
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-----~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~-~ 206 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-----YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG-H 206 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-----hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc-e
Confidence 3489999999999999976 467788888743221 12345667777777654 458899998876543 6
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCC-----------
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDF----------- 502 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~----------- 502 (658)
.++|||++ +++|.+++.+.+ .+++..+..|+.||+.||+|||+ . +||||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccccccccc
Confidence 89999998 679999887553 58999999999999999999997 5 999999999999998765
Q ss_pred -----CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHH
Q 006178 503 -----SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVD 576 (658)
Q Consensus 503 -----~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~ 576 (658)
.+||+|||.+..... ......++..|+|||++.+..++.++|||||||++|||+||+.||...... ...
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 355 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355 (467)
T ss_pred CCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 489999998753211 112233456799999999999999999999999999999999999754321 111
Q ss_pred HHHHhhc-CCccc---------cccc------CCcCC-----------CC-CHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 006178 577 WAKDYLE-LPEVM---------SYVV------DPELK-----------HF-SYDDLKVICEVVNLCVNPDITKRPSMQEL 628 (658)
Q Consensus 577 ~~~~~~~-~~~~~---------~~~~------~~~~~-----------~~-~~~~~~~~~~li~~cl~~dP~~RPs~~ev 628 (658)
.+..... .+..+ .... .+... .. .......+.+|+.+||+.||++|||++|+
T Consensus 356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~ 435 (467)
T PTZ00284 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435 (467)
T ss_pred HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence 1111100 00000 0000 00000 00 00113457899999999999999999999
Q ss_pred HHH
Q 006178 629 CTM 631 (658)
Q Consensus 629 l~~ 631 (658)
+++
T Consensus 436 L~H 438 (467)
T PTZ00284 436 TTH 438 (467)
T ss_pred hcC
Confidence 973
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=303.05 Aligned_cols=246 Identities=22% Similarity=0.277 Sum_probs=194.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||.|+||.||+|+.. ++..+++|.+..... ......+.+|++++++++|+||+++++++.+.. ..++|+|
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 79 (274)
T cd06609 5 LLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA---EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--KLWIIME 79 (274)
T ss_pred hhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc---chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC--eEEEEEE
Confidence 4478999999999999976 567888887743321 223456889999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||+++.+.....
T Consensus 80 ~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 80 YCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred eeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 99999999999754 589999999999999999999999 999999999999999999999999999877643321
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....++..|++||++.+..++.++|||||||++|||+||+.||...... ........ ...+.....
T Consensus 154 ~--~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~-------~~~~~~~~~- 221 (274)
T cd06609 154 K--RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVLFLIPK-------NNPPSLEGN- 221 (274)
T ss_pred c--cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHHHHhhh-------cCCCCCccc-
Confidence 1 11223345699999999888999999999999999999999999643321 11111100 011111100
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||..+|++|||++++++.
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 134568899999999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=300.32 Aligned_cols=247 Identities=19% Similarity=0.284 Sum_probs=197.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||++.+. +++.+++|.+..... ....+++.+|++++++++||||+++++++...+ ..++++|
T Consensus 5 ~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 79 (265)
T cd06605 5 YLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN---EAIQKQILRELDILHKCNSPYIVGFYGAFYNNG--DISICME 79 (265)
T ss_pred HHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC---hHHHHHHHHHHHHHHHCCCCchhhhheeeecCC--EEEEEEE
Confidence 4478999999999999987 577888887754322 234567889999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+++++|.+++.... ..+++..+..++.|++.||+|||+ . +++|+||||+||++++++.+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 80 YMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred ecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 999999999997543 368999999999999999999999 8 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC---CcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK---GNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... ..+...|++||.+.+..++.++||||||+++|+|++|+.||.... ............. ..
T Consensus 156 ~~~----~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~ 221 (265)
T cd06605 156 AKT----FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE----------PP 221 (265)
T ss_pred hhc----ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC----------CC
Confidence 111 234456999999999999999999999999999999999996542 2222222222111 11
Q ss_pred CCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYD-DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+.. .+..+.+++.+||..||++|||+.|++..
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 111222 45668899999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=306.52 Aligned_cols=262 Identities=19% Similarity=0.234 Sum_probs=195.3
Q ss_pred ccHHHHHHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceee
Q 006178 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLG 425 (658)
Q Consensus 350 ~~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~ 425 (658)
++.+++.+++.+|. +.||+|+||.||++... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~ 86 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYG 86 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 33445555555564 78999999999999985 56788888764322 1234678899999999 8999999999
Q ss_pred EEecCCC---CceEEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC
Q 006178 426 YCRESSP---FTRMLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 426 ~~~~~~~---~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 500 (658)
++...+. ...++||||+++|+|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++
T Consensus 87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~ 163 (291)
T cd06639 87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcC
Confidence 9875431 2579999999999999988632 233589999999999999999999999 9999999999999999
Q ss_pred CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-----CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH
Q 006178 501 DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-----HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575 (658)
Q Consensus 501 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~ 575 (658)
++.+||+|||++.......... ....++..|+|||.+... .++.++|||||||++|||++|+.||...... .
T Consensus 164 ~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~ 240 (291)
T cd06639 164 EGGVKLVDFGVSAQLTSTRLRR--NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-K 240 (291)
T ss_pred CCCEEEeecccchhcccccccc--cCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-H
Confidence 9999999999987654222111 112345669999987643 3689999999999999999999999653321 1
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ...... .. +.. ..+......+.+++.+||+.+|++||++.|+++.
T Consensus 241 ~~-~~~~~~--~~-----~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 TL-FKIPRN--PP-----PTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HH-HHHhcC--CC-----CCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11 111100 00 001 1122334568899999999999999999999864
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=306.57 Aligned_cols=247 Identities=18% Similarity=0.241 Sum_probs=194.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|... +++.+|+|.+..... ...+.+.+|+.+++.++|+||+++++++...+ ..++||
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~ 95 (297)
T cd06656 22 TRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVM 95 (297)
T ss_pred eeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--EEEEee
Confidence 34578999999999999974 688999998754332 22356889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.+. .+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 96 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999998643 489999999999999999999999 99999999999999999999999999887543222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....+...|++||...+..++.++|||||||++|+|+||+.||........ . ... .....+. ...
T Consensus 170 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-~-~~~-------~~~~~~~-~~~ 237 (297)
T cd06656 170 SK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L-YLI-------ATNGTPE-LQN 237 (297)
T ss_pred cC--cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-e-eee-------ccCCCCC-CCC
Confidence 11 1122345568999999998899999999999999999999999964332110 0 000 0000000 012
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.+|++||++.++++.
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 23345668899999999999999999999983
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=301.94 Aligned_cols=253 Identities=19% Similarity=0.257 Sum_probs=195.0
Q ss_pred hcccccCCCCeeEEEEEecC--CCeEEEEEEeeeccc------cchhhHHHHHHHHHHHHh-ccCCCccceeeEEecCCC
Q 006178 362 FSNIIGSSPDSLVYKGTMKG--GPEIAVISLCIKEEH------WTGYLELYFQREVADLAR-INHENTGKLLGYCRESSP 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~--~~~vavk~~~~~~~~------~~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~~~~ 432 (658)
+.+.||+|+||.||+|.... ++.+|+|.+...... .......++.+|+.++.+ ++||||+++++++.+.+
T Consensus 4 ~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~- 82 (269)
T cd08528 4 VLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND- 82 (269)
T ss_pred hhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC-
Confidence 44789999999999999875 678888887543211 122334567789998875 69999999999998877
Q ss_pred CceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 433 FTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ . +++|+||||+||++++++.+||+||
T Consensus 83 -~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 83 -RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred -eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEecc
Confidence 78999999999999998753 223458999999999999999999996 5 8999999999999999999999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
|.+....... ......++..|++||...+..++.++||||||+++|||++|+.||..... .......... . ..
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--~~~~~~~~~~-~-~~ 231 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--LSLATKIVEA-V-YE 231 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--HHHHHHHhhc-c-CC
Confidence 9987643322 11223345679999999988899999999999999999999999864322 2221111111 0 00
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
+. .....+..+.+++.+||+.||++||++.|+..+++
T Consensus 232 ----~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 232 ----PL---PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ----cC---CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00 01123456889999999999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=307.31 Aligned_cols=260 Identities=18% Similarity=0.223 Sum_probs=191.6
Q ss_pred HHHHHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEe
Q 006178 353 QELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCR 428 (658)
Q Consensus 353 ~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~ 428 (658)
+.+....++|. +.||+|+||.||+++.. +++.+|+|...... .....+.+|+.+++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 33444444444 88999999999999976 46778888653221 1234678899999999 7999999999885
Q ss_pred cC---CCCceEEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 429 ES---SPFTRMLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 429 ~~---~~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
.. .....++||||+++++|.+++... ....+++..+..++.|+++||.|||+. +++||||||+||++++++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCC
Confidence 32 122679999999999999987532 233589999999999999999999999 9999999999999999999
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHH
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~ 578 (658)
+||+|||+++.+..... ......++..|+|||++.. ..++.++|||||||++|||++|+.||...... ....
T Consensus 163 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-~~~~ 239 (286)
T cd06638 163 VKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-RALF 239 (286)
T ss_pred EEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-HHHh
Confidence 99999999876532211 1112234567999998753 45789999999999999999999998643221 1111
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
. .... ..+.. ..+......+.+++.+||+.||++|||+.|+++..
T Consensus 240 ~-~~~~-------~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 K-IPRN-------PPPTL-HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred h-cccc-------CCCcc-cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 0000 00000 01112235688999999999999999999998753
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=300.56 Aligned_cols=244 Identities=20% Similarity=0.272 Sum_probs=195.0
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|.+. ++..+|+|.+..... ....+.+.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--KLWIIMEY 83 (277)
T ss_pred hhhcccCCCeEEEEEEEccCCEEEEEEEEecccc---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEec
Confidence 367999999999999976 467788887643321 233467899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++..+ .+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 84 ~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 84 LGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence 9999999998743 489999999999999999999999 9999999999999999999999999998765432211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.........|+|||.+.+..++.++|||||||++|||+||+.||........ .... ........+.
T Consensus 158 --~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~----------~~~~~~~~~~ 223 (277)
T cd06640 158 --RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--LFLI----------PKNNPPTLTG 223 (277)
T ss_pred --cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--hhhh----------hcCCCCCCch
Confidence 1112234568999999988899999999999999999999999864332111 0000 0001122344
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 566788999999999999999999999876
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=307.06 Aligned_cols=258 Identities=14% Similarity=0.127 Sum_probs=190.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +|..+|+|++...... ......+.+|++++++++||||+++++++.+.. ..++|+|
T Consensus 4 ~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 79 (284)
T cd07839 4 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLYDVLHSDK--KLTLVFE 79 (284)
T ss_pred eEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc--ccCccchhHHHHHHHhcCCCCeeeHHHHhccCC--ceEEEEe
Confidence 4578999999999999986 5788999988544321 122346778999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ ++|.+++.... ..+++..+..++.||++||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 80 YCD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred cCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 996 58888876433 2589999999999999999999999 999999999999999999999999999876432211
Q ss_pred CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHH--HHhhcCCcc-----cccc-
Q 006178 521 KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA--KDYLELPEV-----MSYV- 591 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~--~~~~~~~~~-----~~~~- 591 (658)
. ......+..|+|||.+.+. .++.++|||||||++|||+||..|+........... ......+.. ....
T Consensus 155 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 155 C--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred C--cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 1 1112335679999998764 478999999999999999999988643332111111 000000000 0000
Q ss_pred ---cCCcCC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 ---VDPELK------HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ---~~~~~~------~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+... ...+..+..+.+++.+||+.||.+|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000 011223467889999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=305.28 Aligned_cols=244 Identities=19% Similarity=0.284 Sum_probs=192.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..||+|+||.||++... ++..+|+|++.... ....+.+.+|+.++++++|+||+++++.+...+ ..++||||+
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~lv~e~~ 101 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD--ELWVVMEFL 101 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecch----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC--eEEEEEeCC
Confidence 56999999999999975 57788998874322 223456889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++++|.+++... .+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||+|||++.........
T Consensus 102 ~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~- 174 (292)
T cd06658 102 EGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK- 174 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc-
Confidence 999999988543 489999999999999999999999 9999999999999999999999999998765322211
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.....++..|+|||...+..++.++|||||||++|||++|+.||........ ...... ...+... ....
T Consensus 175 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~-------~~~~~~~-~~~~ 243 (292)
T cd06658 175 -RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA--MRRIRD-------NLPPRVK-DSHK 243 (292)
T ss_pred -CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHh-------cCCCccc-cccc
Confidence 1122345679999999888899999999999999999999999965432111 111100 0111111 1112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+..+.+++.+||+.||++|||++|+++.
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 34567899999999999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=304.77 Aligned_cols=247 Identities=21% Similarity=0.276 Sum_probs=188.0
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC----CCceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS----PFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~----~~~~~ 436 (658)
.+.||+|+||.||+|++. +++.+|+|.+.... ....++..|+.++.++ +|+||+++++++.... ....+
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 478999999999999985 46677777663322 2234678899999999 7999999999986421 22679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
++|||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 999999999999999765555688999999999999999999999 99999999999999999999999999987653
Q ss_pred hcCCCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
..... .....+...|+|||.+. ...++.++|||||||++|||+||+.||........... .. ..
T Consensus 173 ~~~~~--~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~--~~-------~~ 241 (282)
T cd06636 173 RTVGR--RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL--IP-------RN 241 (282)
T ss_pred ccccC--CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh--Hh-------hC
Confidence 22111 11122345699999876 34688899999999999999999999964321110000 00 00
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+.. .....+..+.+++.+||+.||.+|||+.|+++
T Consensus 242 ~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 242 PPPKL--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CCCCC--cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00111 11234467889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=305.69 Aligned_cols=258 Identities=17% Similarity=0.180 Sum_probs=191.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|++|.||+|+.. ++..+|+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~ 80 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEF 80 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccc--cccchHHHHHHHHHHhcCCCCCcchhhhcccCC--cEEEEeec
Confidence 378999999999999976 5788999887543321 223356889999999999999999999998777 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+. ++|.+++.......+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 95 6899998765555689999999999999999999999 9999999999999999999999999998765322111
Q ss_pred CCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCCcc-----------
Q 006178 522 NPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEV----------- 587 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~~~----------- 587 (658)
.........|+|||.+.+.. ++.++|||||||++|||+||+.||...... ..............
T Consensus 157 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 157 --YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred --cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 11112345689999887644 688999999999999999999999654321 11111110000000
Q ss_pred ---cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 ---MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 ---~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...................+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000000011123356789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=313.58 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=194.5
Q ss_pred ccccCCCCeeEEEEEecCCCeEEE-EEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAV-ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vav-k~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..||.|+||.||+|..++....|+ |.+..++ +...++|.-|++||..++||+||++++.|+..+ ..+|+.|||
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetks----eEELEDylVEIeILa~CdHP~ivkLl~ayy~en--kLwiliEFC 111 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKS----EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN--KLWILIEFC 111 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccc----hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC--ceEEEEeec
Confidence 568999999999999887665554 4443332 345578999999999999999999999887777 689999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
.||-...++-.-++ ++++.++.-+++|++.||.|||++ .|||||||..|||++-+|.++|+|||.+..........
T Consensus 112 ~GGAVDaimlEL~r-~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGR-VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred CCchHhHHHHHhcc-ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 99999888765444 699999999999999999999999 99999999999999999999999999876544332222
Q ss_pred CCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 523 PGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. ...++++|||||+.. ..+|+.++|||||||+|.||..+.+|-..-.. ..-.++..-.. .|.+
T Consensus 188 D--sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-MRVllKiaKSe--------PPTL- 255 (1187)
T KOG0579|consen 188 D--SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSE--------PPTL- 255 (1187)
T ss_pred c--cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-HHHHHHHhhcC--------CCcc-
Confidence 2 234568899999864 57899999999999999999999999643221 11111111111 1111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
-.|..+...+.+++.+||..||..||++.++++.
T Consensus 256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 2356677889999999999999999999999864
|
|
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=301.68 Aligned_cols=248 Identities=19% Similarity=0.200 Sum_probs=192.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||.|+||.||+|... ++..+|+|.+.... ....+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 9 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 82 (280)
T cd06611 9 IIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELEDFMVEIDILSECKHPNIVGLYEAYFYEN--KLWILIE 82 (280)
T ss_pred HHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC--eEEEEee
Confidence 4478999999999999986 56788888774332 223457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..... .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 83 FCDGGALDSIMLELER-GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred ccCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 9999999999875433 589999999999999999999999 999999999999999999999999998765432211
Q ss_pred CCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
. .....++..|++||.+. ...++.++||||||+++|||++|+.||...... .......... .+.
T Consensus 159 ~--~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~-------~~~ 227 (280)
T cd06611 159 K--RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RVLLKILKSE-------PPT 227 (280)
T ss_pred c--cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HHHHHHhcCC-------CCC
Confidence 1 11223455689999874 345788999999999999999999999654321 1111111110 001
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+ ..+...+..+.+++.+||+.+|.+||++.++++.
T Consensus 228 ~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 228 L-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred c-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1 1122344568899999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=301.04 Aligned_cols=249 Identities=16% Similarity=0.219 Sum_probs=195.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|... ++..+|+|.+..... .....+.+.+|++++++++|+||+++++.+.+.. ..++|+|
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e 79 (257)
T cd08225 4 IIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQENG--RLFIVME 79 (257)
T ss_pred EEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheeccCC--eEEEEEe
Confidence 4578999999999999986 467888887754321 1223457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-CceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~ 519 (658)
|+++++|.+++.......+++..+..++.|+++||+|||+. +++|+||||+||++++++ .+||+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 99999999999765555689999999999999999999999 999999999999999885 46999999887654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||+..+..++.++||||||+++|||++|..||.... ..++....... .....
T Consensus 157 ~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~----------~~~~~ 222 (257)
T cd08225 157 EL--AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--LHQLVLKICQG----------YFAPI 222 (257)
T ss_pred cc--ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHhcc----------cCCCC
Confidence 11 112234566999999988889999999999999999999999986432 22222221111 11111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+++.+||+.+|++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 22334568899999999999999999999764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=297.04 Aligned_cols=253 Identities=20% Similarity=0.293 Sum_probs=196.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
++.+.||.|+||.||+|... ++..+++|++...... ...+.+.+|+++++.++|+||+++++.+...+ ..++||
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~ 78 (267)
T cd06610 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ---TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD--ELWLVM 78 (267)
T ss_pred eeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc---hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC--EEEEEE
Confidence 34588999999999999965 5677888876433222 14467899999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 440 DYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 99999999999975432 4689999999999999999999999 9999999999999999999999999998876543
Q ss_pred CCCC--CCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 519 SEKN--PGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 519 ~~~~--~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.... ......+...|++||++... .++.++|||||||++|||++|+.||....... ......... .+.
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~--------~~~ 226 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQND--------PPS 226 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCC--------CCC
Confidence 3221 11222345668999998876 78999999999999999999999996543211 111111110 011
Q ss_pred CCCC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 596 LKHF--SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 596 ~~~~--~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.... ....+..+.+++.+||+.||++||++.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 227 LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111 1234567889999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=297.75 Aligned_cols=245 Identities=17% Similarity=0.181 Sum_probs=193.8
Q ss_pred ccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||.|+||.||+|+... ++.+++|.+.... .......+.+.+|+.++++++||||+++++++.++. ..++||||+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRH-IVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK--YIYMLMEYCLG 77 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhc-chhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC--ccEEEEecCCC
Confidence 6999999999999864 7788888875432 222234567999999999999999999999998877 67999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
++|.+++.+.. .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++...... ..
T Consensus 78 ~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~ 149 (262)
T cd05572 78 GELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KT 149 (262)
T ss_pred CcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cc
Confidence 99999997654 489999999999999999999998 99999999999999999999999999987654321 11
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHH
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDL 604 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (658)
....+...|++||.+.+..++.++|+||||+++|||++|..||.....+............ ....++...+
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 220 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN---------GKLEFPNYID 220 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC---------CCCCCCcccC
Confidence 1223455699999998888999999999999999999999999765433333322222100 1111222335
Q ss_pred HHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006178 605 KVICEVVNLCVNPDITKRPS-----MQELCT 630 (658)
Q Consensus 605 ~~~~~li~~cl~~dP~~RPs-----~~evl~ 630 (658)
..+.+++.+||+.+|++||+ +.|+++
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 67899999999999999999 555554
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=304.16 Aligned_cols=260 Identities=20% Similarity=0.216 Sum_probs=194.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|... +++.+++|++...... ........+..|++++++++|+||+++++++.+.+ ..++||
T Consensus 4 ~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~ 81 (298)
T cd07841 4 KGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS--NINLVF 81 (298)
T ss_pred eeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC--EEEEEE
Confidence 4478999999999999976 5789999998654322 11223456778999999999999999999998866 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+ +|+|.+++.... ..+++..+..++.||++||+|||++ +++|+||||+||+++.++.+||+|||+++......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 999 889999997654 3599999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHH--hhcCCc--------cc
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD--YLELPE--------VM 588 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~--~~~~~~--------~~ 588 (658)
... ........|+|||.+.+ ..++.++|||||||++|||++|.+||..... .....+. ....+. ..
T Consensus 157 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 RKM--THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred ccc--cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHHcCCCchhhhhhcccc
Confidence 111 11223456899998865 4678999999999999999999887764332 1111111 110000 00
Q ss_pred ccccC------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 SYVVD------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ~~~~~------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..... ..........+..+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000 00001112335678899999999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=303.99 Aligned_cols=244 Identities=18% Similarity=0.267 Sum_probs=192.5
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..||+|+||.||+|... +++.+|+|.+..+.. ...+.+.+|+.+++.++||||+++++++...+ ..++||||+
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~iv~e~~ 100 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE--ELWVLMEFL 100 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHHHHHHHHHHHhCCCCchhhhhhheeeCC--eEEEEEecC
Confidence 57999999999999975 678899998754332 22456889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++++|.+++... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..+.......
T Consensus 101 ~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 174 (297)
T cd06659 101 QGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 174 (297)
T ss_pred CCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc
Confidence 999999987542 489999999999999999999999 99999999999999999999999999987553222111
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
....+...|+|||++.+..++.++|||||||++|||++|+.||....... .......... +.. .....
T Consensus 175 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~-------~~~-~~~~~ 242 (297)
T cd06659 175 --KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRDSPP-------PKL-KNAHK 242 (297)
T ss_pred --cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhccCC-------CCc-cccCC
Confidence 12234567999999998899999999999999999999999996443211 1111111100 000 01112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+..+.+++.+||+.+|++||++.|+++.
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 33557899999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=298.98 Aligned_cols=255 Identities=17% Similarity=0.246 Sum_probs=193.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||.|++|.||++.+. +++.+|+|.+..... .....++.+|++++++++||||+++++++.+......++||||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN---PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCc---hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 478999999999999986 466777776643221 1335678999999999999999999999876554468999999
Q ss_pred cCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
+++++|.+++.. .....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999999988753 2234589999999999999999999999 99999999999999999999999999986543221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC---cHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG---NLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
. ........|++||.+.+..++.++|||||||++|||+||+.||..... ...+.......... ....+ .
T Consensus 160 ~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~- 231 (287)
T cd06621 160 A----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN--PELKD-E- 231 (287)
T ss_pred c----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc--hhhcc-C-
Confidence 1 112234568999999988999999999999999999999999975421 11122111111000 00000 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......++.+.+++.+||+.+|++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 232 PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00011245678899999999999999999999884
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=303.05 Aligned_cols=258 Identities=17% Similarity=0.161 Sum_probs=192.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||.|++|.||+|... +|..+|+|++...... ....+.+.+|++++++++|||++++++++.+.+ ..+++|||
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~--~~~iv~e~ 79 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED--EGVPSTAIREISLLKELNHPNIVRLLDVVHSEN--KLYLVFEF 79 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc--ccchhHHHHHHHHHHhcCCCCccCHhheeccCC--eEEEEEec
Confidence 478999999999999975 6888999987544321 222346788999999999999999999998876 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
++ ++|.+++.......+++..+..++.|+++||+|||++ +++||||+|+||++++++.+||+|||+++........
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 95 6999998766544689999999999999999999999 9999999999999999999999999998754322111
Q ss_pred CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcH--HHHHHHhhcCCcc-----------
Q 006178 522 NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--VDWAKDYLELPEV----------- 587 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~----------- 587 (658)
.........|+|||++.+. .++.++||||||+++|||+||+.||....... .............
T Consensus 156 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 156 --YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred --cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 1111235669999988664 57899999999999999999999996543211 1111110000000
Q ss_pred ---cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 ---MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 ---~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
................+..+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000111111223356889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=297.02 Aligned_cols=252 Identities=17% Similarity=0.231 Sum_probs=196.0
Q ss_pred cccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccc--cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 363 SNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.||+|+||.||+|.. .+++.+|+|.+...... ......+.+.+|++++++++|+||+++++++.+.+ ..++||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~v~ 82 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS--HFNLFV 82 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC--eEEEEE
Confidence 47899999999999996 46788999887543321 11224567899999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-Cceeccccchhhhhhc
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILAR 518 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~ 518 (658)
||+++++|.+++.+.. ++++..+..++.|++.||+|||++ +++|+||||+||+++.++ .+||+|||.+..+...
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 83 EWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred eccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 9999999999997543 589999999999999999999999 999999999999998776 5999999998766432
Q ss_pred CCCCC--CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCc
Q 006178 519 SEKNP--GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 519 ~~~~~--~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||..... ............ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------~~ 228 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA---------TT 228 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc---------CC
Confidence 11111 1112345679999999888899999999999999999999999964332 111111111000 01
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
....+......+.+++.+|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 12234455677889999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=303.40 Aligned_cols=257 Identities=20% Similarity=0.185 Sum_probs=189.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.+ +++.+|+|.+...... .....+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 83 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE---GAPFTAIREASLLKDLKHANIVTLHDIIHTKK--TLTLVFE 83 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc---CCchhHHHHHHHHhhCCCcceeeEEEEEecCC--eEEEEEe
Confidence 3478999999999999986 5788999987543321 11234678999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++ +|.+++..... .+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~~-~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 84 YLDT-DLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred cCCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 9974 99998875443 689999999999999999999999 999999999999999999999999998865321111
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHH--HHhhcCC--cccccc----
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA--KDYLELP--EVMSYV---- 591 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~--~~~~~~~--~~~~~~---- 591 (658)
.......+..|+|||.+.+ ..++.++||||+||++|||++|+.||.........+. ......+ ......
T Consensus 159 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 159 --TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred --cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 1111223566899999875 4588999999999999999999999965432111111 1111000 000000
Q ss_pred --cC--------CcCCCCCHHH--HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 --VD--------PELKHFSYDD--LKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 --~~--------~~~~~~~~~~--~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.. ..+....... ...+.+++.+|++.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00 0000000011 156779999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=302.51 Aligned_cols=243 Identities=20% Similarity=0.223 Sum_probs=192.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||++... +++.+|+|.+.... .......+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 5 ~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 81 (290)
T cd05580 5 FIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK-IVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS--NLYLVME 81 (290)
T ss_pred EEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-hhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--eEEEEEe
Confidence 4578999999999999976 57788888774322 112233457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||+++.....
T Consensus 82 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 82 YVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred cCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 999999999997653 589999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||.+.+...+.++||||||+++|||++|+.||..... ........... ...+
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~-----------~~~~ 218 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQIYEKILEGK-----------VRFP 218 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCC-----------ccCC
Confidence 1122345669999999888899999999999999999999999965431 11111111110 0122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCT 630 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~ 630 (658)
...+..+.+++.+||+.||.+|| +++|+++
T Consensus 219 ~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 219 SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 22346688999999999999998 6666653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=299.85 Aligned_cols=242 Identities=18% Similarity=0.134 Sum_probs=188.3
Q ss_pred ccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||+|+||+||++... +++.+++|.+..+... .....+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD--DLCLVMTLMNG 77 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC--eEEEEEecCCC
Confidence 699999999999865 5778888887543321 1223446778999999999999999999998877 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
++|.+++.......+++.++..++.|++.||.|||+. +++||||||+||++++++.+||+|||.+....... ..
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~ 151 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KI 151 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---cc
Confidence 9999999765544689999999999999999999999 99999999999999999999999999987653211 11
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
....+...|++||++.+..++.++|||||||++|+|++|+.||...... .......... .....+..
T Consensus 152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 220 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-----------MAVEYPDK 220 (277)
T ss_pred ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-----------ccccCCcc
Confidence 1122345689999998888999999999999999999999999654321 1111111000 01112223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQE 627 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~e 627 (658)
.+..+.+++.+||+.||++||++.|
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCc
Confidence 3566889999999999999994444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=301.19 Aligned_cols=250 Identities=19% Similarity=0.214 Sum_probs=188.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|+||.||++... ++..+|+|++...... .....+.+|+.++.++. |+||+++++++..++ ..+++||
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~--~~~~~~e 83 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE---KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG--DCWICME 83 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh---HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC--cEEEEEe
Confidence 368999999999999976 5788999987543322 33557889999999995 999999999998776 6799999
Q ss_pred ecCCCChhhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHL---HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l---~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+.. ++.++. .......+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+||+|||+++.+..
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9854 655543 2223346899999999999999999999732 899999999999999999999999999876532
Q ss_pred cCCCCCCcccccCccccCCcccccC---CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEAR---HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||..... ........... ..+
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~-------~~~ 229 (288)
T cd06616 161 SIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLTQVVKG-------DPP 229 (288)
T ss_pred CCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHhhhcCC-------CCC
Confidence 211 1112234569999998776 689999999999999999999999965431 11111111110 001
Q ss_pred cCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+. ......+..+.+++.+||+.||++|||+.||++.
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 1112345678899999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=303.52 Aligned_cols=257 Identities=21% Similarity=0.267 Sum_probs=192.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|.++ +++.+|+|++...... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 80 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD--KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK--RLYLVFE 80 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc--chhhHHHHHHHHHHHhcCCcchhhHHHhcccCC--eEEEEEe
Confidence 3478999999999999986 4778888876443322 123456889999999999999999999998776 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.++..... .+++.++..++.|+++||+|||+. +++||||+|+||++++++.+||+|||++..+.....
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 999988988776433 489999999999999999999999 999999999999999999999999999876533221
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhh-------------cCCc
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL-------------ELPE 586 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~-------------~~~~ 586 (658)
. .....+...|+|||++.+ ..++.++||||||+++|||++|++||..... ...+..... ....
T Consensus 156 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 156 V--YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred c--cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHhCCCchhhHHHhccch
Confidence 1 111234566899999875 4578899999999999999999999864432 111111000 0000
Q ss_pred ccccccCCcCC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 587 VMSYVVDPELK------HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 587 ~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.......+... ...+..+..+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000011110 011233567899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=306.15 Aligned_cols=251 Identities=19% Similarity=0.170 Sum_probs=195.2
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|...+ ++.+|+|.+...... .....+.+.+|++++++++|+||+++++++.+.. ..++||||
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 82 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI-KRNKVKRVLTEQEILATLDHPFLPTLYASFQTET--YLCLVMDY 82 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc-hHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC--EEEEEEEe
Confidence 4789999999999999874 788999988654322 2234457899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.+++|.+++.......+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||++.........
T Consensus 83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 9999999999865555699999999999999999999999 9999999999999999999999999998754322111
Q ss_pred CC---------------------------CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH
Q 006178 522 NP---------------------------GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574 (658)
Q Consensus 522 ~~---------------------------~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~ 574 (658)
.. .....++..|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~- 238 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD- 238 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH-
Confidence 00 00112345699999999888999999999999999999999999654322
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPS----MQELCT 630 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs----~~evl~ 630 (658)
..+. ....... ... .....+..+.+++.+||+.||++||+ ++|+++
T Consensus 239 ~~~~-~~~~~~~--------~~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 239 ETFS-NILKKEV--------TFP-GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHH-HHhcCCc--------cCC-CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1111 1111100 000 01114567889999999999999999 666555
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=301.14 Aligned_cols=259 Identities=19% Similarity=0.223 Sum_probs=194.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+++|++...... ....+.+.+|+.++++++||||+++++++.+.. ..++|||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e 79 (286)
T cd07832 4 ILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE--GGIPNQALREIKALQACQHPYVVKLLDVFPHGS--GFVLVME 79 (286)
T ss_pred EEeecccCCCcEEEEEEECCCCceEEEEEEEccccc--chhhHHHHHHHHHHHhCCCCCCcceeeEEecCC--eeEEEec
Confidence 4578999999999999975 6788999987554321 233467899999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+ +++|.+++.... ..+++.++..++.||++||+|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 99 999999987544 3699999999999999999999999 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcCCcc----------
Q 006178 521 KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLELPEV---------- 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~~~~---------- 587 (658)
.......++..|+|||.+.+. .++.++||||+|+++|||+||.+||..... ...+ .......+..
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred -CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCCCChHHHhhccCcc
Confidence 111122345569999998654 468999999999999999999888754332 1111 1111111000
Q ss_pred -cccccCCcCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 -MSYVVDPELK-----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 -~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+... ...++....+.+++.+|++.+|++|||++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 0111234778999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=299.01 Aligned_cols=245 Identities=16% Similarity=0.115 Sum_probs=184.9
Q ss_pred cccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh---ccCCCccceeeEEecCCCCceEEEEE
Q 006178 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR---INHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~---l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.||+|+||.||++... +++.+|+|.+....... ......+.+|..+++. .+||||+.+++++...+ ..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD--KLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEcccccc-chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC--eEEEEEe
Confidence 4899999999999975 57788998775443221 1122334455444443 47999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++..+. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 78 ~~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~- 151 (279)
T cd05633 78 LMNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (279)
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-
Confidence 999999999987554 499999999999999999999999 99999999999999999999999999986543211
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....++..|+|||...+ ..++.++|||||||++|||+||+.||................. .. ...
T Consensus 152 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-------~~---~~~ 218 (279)
T cd05633 152 ---PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-------VN---VEL 218 (279)
T ss_pred ---ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc-------CC---cCC
Confidence 112234567999999864 5689999999999999999999999965432221111111100 01 112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|| +++|+++.
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 333456788999999999999999 58888775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=298.62 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=198.4
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|++|.||+|+..+ ++.+++|++...... ...+.+.+|++.+.+++|+||+++++++...+ ..++|||
T Consensus 5 ~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 79 (264)
T cd06623 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE---EFRKQLLRELKTLRSCESPYVVKCYGAFYKEG--EISIVLE 79 (264)
T ss_pred eeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch---HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC--eEEEEEE
Confidence 34889999999999999874 888999887544321 34567999999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 80 YMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred ecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 99999999999755 358999999999999999999999 8 99999999999999999999999999887654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
... ........|+|||.+.+..++.++||||||+++|||+||+.||..... ...+....... .....
T Consensus 155 ~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----------~~~~~ 222 (264)
T cd06623 155 DQC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD----------GPPPS 222 (264)
T ss_pred Ccc--cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc----------CCCCC
Confidence 221 112234568999999988999999999999999999999999965431 22222211111 11111
Q ss_pred CCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYD-DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+.. .+..+.+++.+||+.+|++||++.|+++.
T Consensus 223 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 223 LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 2222 45678899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=295.42 Aligned_cols=250 Identities=20% Similarity=0.251 Sum_probs=194.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|... +++.+++|.+...... ....+.+.+|++++++++|+||+++++++...+ ..++|+||
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 80 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE--KVYIFMEY 80 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhCCCCChhheeeeEecCC--EEEEEEec
Confidence 478999999999999975 6778888887544322 334567999999999999999999999988776 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||||+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999997653 488999999999999999999999 9999999999999999999999999998775432221
Q ss_pred CCC--cccccCccccCCcccccCC---CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 522 NPG--TLGSQGAICILPSSLEARH---LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 522 ~~~--~~~~~~~~~~aPE~~~~~~---~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... ........|++||++.+.. ++.++||||||+++||+++|+.||........ ........ ..+..
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~~~~~-------~~~~~ 227 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFHVGAG-------HKPPI 227 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHHHhcC-------CCCCC
Confidence 111 0122345699999998766 88999999999999999999999964432211 11110000 01111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.. .......+.+++.+||+.+|.+||++.|++.
T Consensus 228 ~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Cc-ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 1122456789999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=304.21 Aligned_cols=259 Identities=19% Similarity=0.189 Sum_probs=191.8
Q ss_pred ccccCC--CCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..||+| +||+||++++. .++.||+|.+...... ....+.+.+|+.+++.++||||+++++++...+ ..++|||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--~~~~v~e 79 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS--WLWVISP 79 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC--ceEEEEe
Confidence 356666 99999999985 6789999887543322 233467899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+.+|+|.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++||+.+........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~ 156 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ 156 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence 99999999999865544689999999999999999999998 999999999999999999999999986544322111
Q ss_pred CCC-----CcccccCccccCCcccccC--CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc------
Q 006178 521 KNP-----GTLGSQGAICILPSSLEAR--HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV------ 587 (658)
Q Consensus 521 ~~~-----~~~~~~~~~~~aPE~~~~~--~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~------ 587 (658)
... .........|++||++.+. .++.++|||||||++|||++|+.||.......... . ....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~-~-~~~~~~~~~~~~~ 234 (328)
T cd08226 157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLL-Q-KLKGPPYSPLDIT 234 (328)
T ss_pred cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHH-H-HhcCCCCCCcccc
Confidence 110 1111223459999998763 47899999999999999999999996543211110 0 0000000
Q ss_pred --------------------cc---------cccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 --------------------MS---------YVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 --------------------~~---------~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ......+. ..+......+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 00000111 1123456778999999999999999999999854
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=303.94 Aligned_cols=256 Identities=14% Similarity=0.062 Sum_probs=195.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||++... .++.|++|.+..... ......+.+.+|+++++.++||||+++++.+...+ ..++|||
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (305)
T cd05609 5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR--HLCMVME 81 (305)
T ss_pred EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC--EEEEEEe
Confidence 3478999999999999986 467888887754321 11223457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 82 YVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 999999999997553 489999999999999999999999 999999999999999999999999998864211000
Q ss_pred C-------------CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 521 K-------------NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 521 ~-------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
. .......+...|+|||.+....++.++|||||||++|||++|+.||..... .++........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--~~~~~~~~~~~-- 232 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--EELFGQVISDD-- 232 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcc--
Confidence 0 000011234569999999888899999999999999999999999964432 22222211110
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
...+. .....+..+.+++.+||+.||++||++.++.+.|+.-
T Consensus 233 ---~~~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 233 ---IEWPE---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred ---cCCCC---ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 00011 0112345678999999999999999987777777663
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=297.47 Aligned_cols=247 Identities=17% Similarity=0.134 Sum_probs=196.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||.|+||.||+|+.. ++..+|+|.+..... ......+.+.+|++++++++||||+++++++.+.. ..++|||
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 80 (258)
T cd05578 4 LLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE--NMYLVVD 80 (258)
T ss_pred EEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh-cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC--eEEEEEe
Confidence 4578999999999999986 577888888754332 22234567899999999999999999999998777 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999755 3589999999999999999999999 99999999999999999999999999887653321
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......+...|++||.+.+..++.++||||||+++|+|++|+.||.........+....... .....+
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------~~~~~~ 222 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET----------ADVLYP 222 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc----------ccccCc
Confidence 11122234568999999988899999999999999999999999976543322222211110 111223
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCH--HHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSM--QELC 629 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~--~evl 629 (658)
...+..+.+++.+||+.||.+||++ +|++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 223 ATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 3345778899999999999999999 5554
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=298.78 Aligned_cols=246 Identities=20% Similarity=0.264 Sum_probs=193.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|... ++..+|+|....... ....+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 7 ~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 81 (277)
T cd06641 7 TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIM 81 (277)
T ss_pred hhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC--eEEEEE
Confidence 34478999999999999875 567888887643221 223457889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++..+....
T Consensus 82 e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 82 EYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 999999999998643 489999999999999999999999 99999999999999999999999999887653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....+...|++||.+.+..++.++|||||||++|||++|..||...... ......... .....
T Consensus 156 ~~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~----------~~~~~ 221 (277)
T cd06641 156 IK--RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFLIPKN----------NPPTL 221 (277)
T ss_pred hh--hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHHHhcC----------CCCCC
Confidence 11 11122345689999998888999999999999999999999998643321 111111100 01112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.+|.+||++.++++.
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 23344668899999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=298.20 Aligned_cols=246 Identities=20% Similarity=0.287 Sum_probs=191.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|.+. +++.+++|.+..... ....+++.+|+.++++++ |||++++++++.+.. ..++
T Consensus 5 ~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~--~~~l 79 (277)
T cd06917 5 RLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP---DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP--RLWI 79 (277)
T ss_pred hhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC---chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC--EEEE
Confidence 3478999999999999974 678888887743321 223456889999999996 999999999998776 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++++|.+++... .+++.....++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++..+..
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 99999999999998653 589999999999999999999999 999999999999999999999999999876543
Q ss_pred cCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.... .....+...|+|||.+.++ .++.++|||||||++|||++|+.||..... ....... .....+.+
T Consensus 154 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~~~-------~~~~~~~~ 222 (277)
T cd06917 154 NSSK--RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA--FRAMMLI-------PKSKPPRL 222 (277)
T ss_pred Cccc--cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh--hhhhhcc-------ccCCCCCC
Confidence 3211 1122345568999998754 478999999999999999999999964321 1111100 00011111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ...+..+.+++.+||+.||++||++.|+++.
T Consensus 223 ~~--~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 223 ED--NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred Cc--ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 11 1144678899999999999999999999874
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=297.54 Aligned_cols=249 Identities=17% Similarity=0.240 Sum_probs=186.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHH-HHhccCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|++. +|+.||+|++...... ....++..|+.+ ++..+||||+++++++...+ ..+++|
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~--~~~lv~ 79 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSVDCPYTVTFYGALFREG--DVWICM 79 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC--cEEEEh
Confidence 3478999999999999986 5889999987543221 123455667665 55669999999999998877 789999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||++ |+|.+++... ....+++..+..++.||+.||+|||+++ +++||||||+||++++++.+||+|||++..+..
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9996 6888887642 2346899999999999999999999853 899999999999999999999999999876532
Q ss_pred cCCCCCCcccccCccccCCccccc----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
.. ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||............ .... ..
T Consensus 157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~-------~~ 225 (283)
T cd06617 157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-VVEE-------PS 225 (283)
T ss_pred cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH-HHhc-------CC
Confidence 11 1111234556899998864 45689999999999999999999999643322221111 1110 00
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+... ....+..+.+++.+||+.+|++||++.|+++.
T Consensus 226 ~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 226 PQLP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 11234668899999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=298.49 Aligned_cols=256 Identities=18% Similarity=0.184 Sum_probs=187.9
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|... +++.+++|.+..+... .....+.+|++++++++|+||+++++++...+ ..++||||
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~lv~e~ 84 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEE---GVPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTFVFEY 84 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC---CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC--eEEEEEec
Confidence 478999999999999875 5788999987543321 12335678999999999999999999998876 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+. +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++........
T Consensus 85 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 159 (291)
T cd07870 85 MH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT 159 (291)
T ss_pred cc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence 95 68877775433 2578899999999999999999999 9999999999999999999999999998754322111
Q ss_pred CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh--hcC------------Cc
Q 006178 522 NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--LEL------------PE 586 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~~~------------~~ 586 (658)
......+..|+|||.+.+. .++.++|||||||++|||+||+.||.............. ... +.
T Consensus 160 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 160 --YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred --CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccc
Confidence 1122235679999998764 578899999999999999999999975443211111100 000 00
Q ss_pred ccccccCC----cCCCCC--HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 587 VMSYVVDP----ELKHFS--YDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 587 ~~~~~~~~----~~~~~~--~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
........ ...... ......+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000 000000 011356789999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=339.67 Aligned_cols=248 Identities=19% Similarity=0.257 Sum_probs=198.3
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..||.|.||.||-|... +|.-.|+|-+...... ....+...+|+.++..++|||+|++||+-.+++ ..+|.||||
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe--kv~IFMEyC 1316 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE--KVYIFMEYC 1316 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCceeecHH--HHHHHHHHh
Confidence 68999999999999965 5677788877554432 333456789999999999999999999999888 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++|+|.+.+...+ ..++.....+-.|++.|++|||++ |||||||||+||+++.+|.+|++|||.|..+.......
T Consensus 1317 ~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred ccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 9999999997554 366777778899999999999999 99999999999999999999999999998876543222
Q ss_pred CCc--ccccCccccCCcccccCC---CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 523 PGT--LGSQGAICILPSSLEARH---LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 523 ~~~--~~~~~~~~~aPE~~~~~~---~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.+. ...+++.|||||++.+.. -.-++||||+|||+.||+||++||...+.+ |. ++..+.-...+
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~a--------IMy~V~~gh~P 1460 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---WA--------IMYHVAAGHKP 1460 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---hH--------HHhHHhccCCC
Confidence 221 223578899999998643 456899999999999999999999654433 21 11222223334
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+|...+.+-.+++.+|++.||++|.++.|+++.
T Consensus 1461 q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1461 QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 5566677888899999999999999998877654
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=300.88 Aligned_cols=260 Identities=19% Similarity=0.231 Sum_probs=193.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
++.+.||+|+||.||+|.+. +++.+++|++..... .....+.+.+|++++++++|+||+++++++...+ ..++||
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~ 79 (288)
T cd07833 4 EVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG--RLYLVF 79 (288)
T ss_pred eEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEECC--EEEEEE
Confidence 34578999999999999987 467888887754322 1223467899999999999999999999998876 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||++++.+..+.... ..+++.++..++.||+.||+|||+. +++||||||+||++++++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 999987676655433 2489999999999999999999999 99999999999999999999999999987654332
Q ss_pred CCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHH-HHhh-cCCc----------
Q 006178 520 EKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA-KDYL-ELPE---------- 586 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~-~~~~-~~~~---------- 586 (658)
.. ......+...|+|||++.+. .++.++||||||+++|||++|+.||.........+. .... ....
T Consensus 155 ~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 155 AS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred cc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 21 11112334568999999887 889999999999999999999999965432211111 0000 0000
Q ss_pred ccc--cccCCcC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 587 VMS--YVVDPEL-----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 587 ~~~--~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
... ....... ..++...+.++.+++.+||+.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 0000000 0112223677899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=297.55 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=190.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC----CCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS----PFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~----~~~~ 435 (658)
+.+.||+|+||.||+|... +++.+++|.+..... ..+++.+|+.+++++ +|+||+++++++.+.. ....
T Consensus 10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred heeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 3488999999999999986 466788887643321 245789999999999 7999999999997644 2257
Q ss_pred EEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 436 MLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
++||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccce
Confidence 99999999999999987533 34689999999999999999999999 99999999999999999999999999887
Q ss_pred hhhhcCCCCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
........ .....++..|+|||.+.. ..++.++|||||||++|||+||+.||...... ... ......
T Consensus 162 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~-~~~~~~---- 233 (275)
T cd06608 162 QLDSTLGR--RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RAL-FKIPRN---- 233 (275)
T ss_pred ecccchhh--hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHH-HHhhcc----
Confidence 54322111 112224456999998753 34788999999999999999999999643211 111 111110
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+.. ..+......+.+++.+||+.||++|||+.|+++
T Consensus 234 ---~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 234 ---PPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ---CCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00111 112234567889999999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=299.64 Aligned_cols=247 Identities=20% Similarity=0.233 Sum_probs=191.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
...+.||+|+||.||+|+.. +++.||+|++...... .....+++.+|++++++++||||+++++++.+.+ ..++||
T Consensus 18 ~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 94 (307)
T cd06607 18 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH--TAWLVM 94 (307)
T ss_pred hhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC--eEEEEH
Confidence 34478999999999999976 5788888887433222 2233456889999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||++ |++.+++..... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~~-~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 95 EYCL-GSASDILEVHKK-PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HhhC-CCHHHHHHHccc-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 9996 588777754332 589999999999999999999999 9999999999999999999999999988654221
Q ss_pred CCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
....+...|+|||.+. ...++.++||||||+++|||+||+.||........ ....... . .+..
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~--~~~~~~~-~------~~~~ 234 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIAQN-D------SPTL 234 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH--HHHHhcC-C------CCCC
Confidence 1122345699999874 45688999999999999999999999864332111 1111000 0 0111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
.+...+..+.+++.+||+.+|++||++.+|+...
T Consensus 235 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 235 --SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred --CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 1223456789999999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=296.50 Aligned_cols=247 Identities=19% Similarity=0.269 Sum_probs=195.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|.+. ++..+++|.+..... ..+.+.+|++++++++|+||+++++++...+ ..++|+|
T Consensus 23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 95 (286)
T cd06614 23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELIINEILIMKDCKHPNIVDYYDSYLVGD--ELWVVME 95 (286)
T ss_pred HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC--EEEEEEe
Confidence 3478999999999999987 578899988754322 3456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999998654 3599999999999999999999998 999999999999999999999999998765532211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .........|++||.+.+..++.++|||||||++|||++|+.||........ . ...... ... .. ..+
T Consensus 172 ~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-~-~~~~~~--~~~-----~~-~~~ 239 (286)
T cd06614 172 K--RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-L-FLITTK--GIP-----PL-KNP 239 (286)
T ss_pred h--hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHHhc--CCC-----CC-cch
Confidence 1 1111234568999999888899999999999999999999999865432211 1 110000 000 00 011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.+|.+||++.++++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 2245678899999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=293.20 Aligned_cols=247 Identities=14% Similarity=0.099 Sum_probs=185.3
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHH-HhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL-ARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|... +++.+|+|.+....... ......+..|..++ ...+|+|++++++++...+ ..++||||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA-KNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD--YLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH-HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC--eEEEEEec
Confidence 46899999999999975 57889998874332111 11223345555544 4458999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||+++....
T Consensus 79 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 79 LNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred cCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 99999999997543 489999999999999999999999 999999999999999999999999998875422
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....+...|++||...+..++.++||||||+++|||+||..||...... ............. .. ....
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~----~~---~~~~ 218 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--AVFDNILSRRINW----PE---EVKE 218 (260)
T ss_pred --cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhcccCC----CC---cccc
Confidence 11112345689999998888999999999999999999999999654321 1111111110000 00 1112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
..+..+.+++.+||+.+|++||++.++.+.|.
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 33466889999999999999998766655443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=296.60 Aligned_cols=243 Identities=17% Similarity=0.260 Sum_probs=192.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|++|.||++... ++..+++|++..... ...+.+.+|+.++++++||||+++++++...+ +.++++||+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~--~~~~v~e~~ 98 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ----QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD--ELWVVMEFL 98 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccch----hHHHHHHHHHHHHHHcCCCChheEEEEEEcCC--eEEEEEecc
Confidence 68999999999999975 677888887743221 23456889999999999999999999998777 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++++|.+++... .+++.++..++.|++.||+|||++ +++||||||+||++++++.+||+|||.+..........
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~ 172 (285)
T cd06648 99 EGGALTDIVTHT---RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR 172 (285)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence 999999998762 489999999999999999999999 99999999999999999999999999877543322111
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
....+...|+|||...+..++.++|||||||++|||++|+.||..... ........... .+... .+..
T Consensus 173 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--~~~~~~~~~~~-------~~~~~-~~~~ 240 (285)
T cd06648 173 --KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--LQAMKRIRDNL-------PPKLK-NLHK 240 (285)
T ss_pred --ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHhcC-------CCCCc-cccc
Confidence 112345679999999888899999999999999999999999865332 12222111110 01111 1112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+..+.+++.+||+.+|++||++.++++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 3456889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=276.67 Aligned_cols=247 Identities=19% Similarity=0.233 Sum_probs=190.9
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
..||.|+.|.|++++++. |..+|||.+.... +....+++...+.++.+. +.|.||+.+|||..+. .+++.||.
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~--dV~IcMel 172 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT--DVFICMEL 172 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccC---CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc--hHHHHHHH
Confidence 569999999999999874 6788898885433 334456788888887777 4899999999998877 67899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|.- -+..++++- ..++++...-++..-+.+||.||.++. +|+|||+||+|||+|+.|++|+||||++..+.+...
T Consensus 173 Ms~-C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA- 247 (391)
T KOG0983|consen 173 MST-CAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA- 247 (391)
T ss_pred HHH-HHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc-
Confidence 943 455555533 346899888899999999999999775 999999999999999999999999999877653322
Q ss_pred CCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.+...+-+.|||||.+.- ..|+.++|||||||+++||.||+.||...+.+.....+-....+ |.+..
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP--------P~L~~ 317 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP--------PLLPG 317 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC--------CCCCc
Confidence 223334567999999864 46999999999999999999999999875544433322221111 12211
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+++..||.+|+.+||...+++++
T Consensus 318 -~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 318 -HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred -ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11145668899999999999999999998875
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=299.82 Aligned_cols=260 Identities=16% Similarity=0.136 Sum_probs=191.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|... +++.+++|.+...... ......+.+|+.++++++||||+++++++...+....++|||
T Consensus 9 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e 86 (293)
T cd07843 9 KLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVME 86 (293)
T ss_pred hhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEeh
Confidence 4478999999999999987 5778888888544322 222345778999999999999999999988763337899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ ++|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++........
T Consensus 87 ~~~-~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 87 YVE-HDLKSLMETMKQ-PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred hcC-cCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 997 599998875443 589999999999999999999999 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcC------------C-
Q 006178 521 KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLEL------------P- 585 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~------------~- 585 (658)
. ......+..|+|||.+.+. .++.++||||||+++|||++|+.||....... ..-....... +
T Consensus 162 ~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 162 P--YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred c--cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 1 1112235669999998764 46899999999999999999999996543210 0000000000 0
Q ss_pred ---cccccccCCcCC-CCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 586 ---EVMSYVVDPELK-HFSYD-DLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 586 ---~~~~~~~~~~~~-~~~~~-~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..........+. .++.. ..+.+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000 11111 3566889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=300.32 Aligned_cols=260 Identities=15% Similarity=0.149 Sum_probs=189.9
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecC
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~ 443 (658)
+.+|.|+++.||+++. +++.+|+|++..... .....+.+.+|++++++++|+||+++++++.+.+ ..+++|||++
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~--~~~~~~e~~~ 82 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC--SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS--ELYVVSPLMA 82 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEecccc--chhHHHHHHHHHHHHHhcCCcchhhhhheeecCC--eEEEEEeccC
Confidence 3445556656666555 678999998865421 2234567999999999999999999999998877 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC-
Q 006178 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN- 522 (658)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~- 522 (658)
+|+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+..+.......
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99999999865444689999999999999999999999 99999999999999999999999999887554322110
Q ss_pred ----CCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc--------
Q 006178 523 ----PGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM-------- 588 (658)
Q Consensus 523 ----~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-------- 588 (658)
..........|+|||.+.. ..++.++|||||||++|||++|+.||.................+...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 1111223456899999876 35889999999999999999999999754322111111000000000
Q ss_pred ----cc----ccCCcC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 ----SY----VVDPEL-----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ----~~----~~~~~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ..++.. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00 000000 01123345678899999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=299.65 Aligned_cols=247 Identities=19% Similarity=0.261 Sum_probs=193.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||++... ++..+++|.+..... ...+.+.+|+.++++++||||+++++++...+ ..++|+
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~ 95 (293)
T cd06647 22 TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ----PKKELIINEILVMRENKHPNIVNYLDSYLVGD--ELWVVM 95 (293)
T ss_pred eeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc----hHHHHHHHHHHHHhhcCCCCeeehhheeeeCC--cEEEEE
Confidence 34578999999999999865 567888888743221 22456889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.+. .+++.++..++.|++.||+|||++ +++||||||+||++++++.+||+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 96 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred ecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 999999999998753 478999999999999999999999 99999999999999999999999999887553322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
... ....++..|++||.+....++.++|||||||++||+++|+.||........ ....... . .+.. ..
T Consensus 170 ~~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~--~~~~~~~-~------~~~~-~~ 237 (293)
T cd06647 170 SKR--STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLIATN-G------TPEL-QN 237 (293)
T ss_pred ccc--ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh--eeehhcC-C------CCCC-CC
Confidence 111 112344569999999888899999999999999999999999964432110 0000000 0 0001 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.+|++||++.+++.+
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 238 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 22344568899999999999999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=299.81 Aligned_cols=255 Identities=16% Similarity=0.152 Sum_probs=195.7
Q ss_pred hcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+++.. ++..+|+|.+............+.+.+|++++.++ +||||+++++.+.... ..+
T Consensus 4 ~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~--~~~ 81 (288)
T cd05583 4 LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT--KLH 81 (288)
T ss_pred EEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--EEE
Confidence 3478999999999999853 56789998875332222223445788999999999 6999999999988776 779
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||+++.+.
T Consensus 82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 82 LILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 9999999999999987543 489999999999999999999998 99999999999999999999999999987654
Q ss_pred hcCCCCCCcccccCccccCCcccccCC--CCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCccccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 592 (658)
..... ......+...|++||...+.. .+.++||||||+++|||+||..||..... ......+.....
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 227 (288)
T cd05583 157 AEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-------- 227 (288)
T ss_pred ccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--------
Confidence 32211 111123456789999987655 78899999999999999999999854321 112222211111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
....+......+.+++.+||+.||++|||+.++.+.|+..
T Consensus 228 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 ---KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ---CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0112222345678999999999999999999888877653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=302.86 Aligned_cols=264 Identities=20% Similarity=0.216 Sum_probs=190.7
Q ss_pred hcccccCCCCeeEEEEEecC---CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.||+|+||.||+|.... +..+|+|.+...... .....+.+.+|+.++++++||||+++++++.+......++|
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 82 (316)
T cd07842 4 IEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-YTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLL 82 (316)
T ss_pred EEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEE
Confidence 45789999999999999764 688999988653211 11223467889999999999999999999988743478999
Q ss_pred EEecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC----CCCceeccccc
Q 006178 439 FDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----DFSPKLVDFDS 511 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~----~~~~kl~DFGl 511 (658)
|||+++ +|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 83 FDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999965 7777765322 23689999999999999999999999 9999999999999999 89999999999
Q ss_pred hhhhhhcCCC-CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-----------HHHH
Q 006178 512 WKTILARSEK-NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-----------VDWA 578 (658)
Q Consensus 512 a~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-----------~~~~ 578 (658)
++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 8865432221 11111233556899998876 458899999999999999999999997543221 0000
Q ss_pred HHhhcCCc-----------cccccc-CCcCCCCC---------H--HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 579 KDYLELPE-----------VMSYVV-DPELKHFS---------Y--DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 579 ~~~~~~~~-----------~~~~~~-~~~~~~~~---------~--~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ....+. ...... ......++ . .....+.+++.+|++.||++|||+.|+++.
T Consensus 239 ~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 239 E-VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred H-HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 000000 000000 00000011 0 223468899999999999999999998753
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=290.37 Aligned_cols=252 Identities=19% Similarity=0.246 Sum_probs=200.0
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|++|.||+|... +++.+++|.+...... ....+.+.+|++++++++||||+++++.+.+......+++|||
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 82 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY 82 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence 378999999999999987 6788888887544322 2345678999999999999999999999988722278999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||++++++.+||+|||.+.........
T Consensus 83 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 83 VSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999997654 599999999999999999999998 9999999999999999999999999998766443221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
...........|++||...+..++.++||||||+++|+|++|..||........ ....... .......+.
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~---------~~~~~~~~~ 227 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA-ALYKIGS---------SGEPPEIPE 227 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHhccc---------cCCCcCCCc
Confidence 112223345679999999888899999999999999999999999976542111 1111110 011112333
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+|++.+|++||++.|+++.
T Consensus 228 ~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 228 HLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 446778999999999999999999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=299.39 Aligned_cols=252 Identities=19% Similarity=0.192 Sum_probs=193.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|+||.||+|+.. ++..+|+|++...... .....+.+.+|++++++++|||++++++++.+.. ..++|||
T Consensus 29 ~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 105 (317)
T cd06635 29 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH--TAWLVME 105 (317)
T ss_pred hhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--eEEEEEe
Confidence 3478999999999999975 5778888877533222 2233457889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ |+|.+.+.... ..+++.++..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 106 ~~~-g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 106 YCL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 996 58888776433 3589999999999999999999999 9999999999999999999999999987653221
Q ss_pred CCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 521 KNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
....+...|+|||++. .+.++.++|||||||++|||++|+.||...... ........... ..
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~~~---------~~ 243 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQNES---------PT 243 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhccC---------CC
Confidence 1123345699999974 456899999999999999999999998643211 11111111000 00
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
......+..+.+++.+||+.+|.+||++.++++.+......
T Consensus 244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 11123345688999999999999999999999876554443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=296.92 Aligned_cols=258 Identities=18% Similarity=0.174 Sum_probs=188.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|... +++.+|+|++...... .......+|+.++.++. |+||+++++++.+......++||
T Consensus 3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS---LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred eEeeccccccceEEEEEEcCCCcEEEEEEehhccCC---chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 4578999999999999975 5788888877543221 11223457899999994 99999999999877323789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||++ |+|.+.+.... ..+++.++..++.|++.||+|||+. +++||||||+||++++ +.+||+|||+++.+....
T Consensus 80 e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 80 ELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred ecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 9996 58888887543 3589999999999999999999999 9999999999999999 999999999987653222
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcc----------
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEV---------- 587 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~---------- 587 (658)
.. .....+..|+|||++.. ..++.++|||||||++|||++|+.||...+. +...+.......+..
T Consensus 154 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 154 PY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred Cc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 11 11223567999997654 5578999999999999999999999965432 111121111110000
Q ss_pred cccccCC-----cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDP-----ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+ .+.......+..+.+++.+||+.+|++||+++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000 0001112346789999999999999999999999863
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=291.96 Aligned_cols=252 Identities=14% Similarity=0.202 Sum_probs=194.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecc-ccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+.. ++..+++|.+..... .......+.+.+|++++++++|+||+++++++.+......+++|
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV 85 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence 4589999999999999975 578899988743321 11233446789999999999999999999998765444678999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... .+++.....++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++......
T Consensus 86 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 86 EYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 9999999999987543 488999999999999999999999 99999999999999999999999999987653211
Q ss_pred CCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.... .....+...|+|||.+.+..++.++|||||||++|||++|+.||..... .... ..... .+....
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~-~~~~~---------~~~~~~ 229 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-MAAI-FKIAT---------QPTKPM 229 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-HHHH-HHHHc---------CCCCCC
Confidence 1111 1112245568999999988899999999999999999999999964321 1111 11111 011112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+....+.+.+++.+||+ +|.+||++.+++.
T Consensus 230 ~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 230 LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 344455778899999999 5799999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=327.00 Aligned_cols=256 Identities=21% Similarity=0.329 Sum_probs=206.0
Q ss_pred hhcccccCCCCeeEEEEEec----C----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK----G----GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~----~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 431 (658)
.+.+.||+|.||.|++|... . ...||||....... ....+.+..|+++|+.+ +|+||+.++|+|...+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~---~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS---SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccC---cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34569999999999999854 1 34688887743332 24567899999999999 7999999999999866
Q ss_pred CCceEEEEEecCCCChhhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGE------R--------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
..++|+||+..|+|.++++..+ . ..++..+.+.++.|||.|++||++. ++|||||..+|||
T Consensus 376 --~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 376 --PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVL 450 (609)
T ss_pred --ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEE
Confidence 6799999999999999998655 0 1388999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCC--Cc
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDK--GN 573 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~--~~ 573 (658)
+.++..+||+|||+|+......... ....++.+..|||||.+....|+.|+|||||||+||||+| |..||.+-. .+
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 9999999999999998654333222 2222235667999999999999999999999999999999 889986522 12
Q ss_pred HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+.++.+ +......|..+..++.++|+.||+.+|++||++.|+.+.++....
T Consensus 531 l~~~l~-------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 531 LLEFLK-------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHHh-------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 222111 112223455667889999999999999999999999999998543
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=300.56 Aligned_cols=261 Identities=20% Similarity=0.190 Sum_probs=191.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|... +|..||+|++...... ......+.+|+.++++++|+||+++++++.+......++|||
T Consensus 11 ~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (309)
T cd07845 11 KLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER--DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME 88 (309)
T ss_pred EeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC--CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence 3478999999999999986 5788999987544322 112234668999999999999999999987654336799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+. ++|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||++........
T Consensus 89 ~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 163 (309)
T cd07845 89 YCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK 163 (309)
T ss_pred cCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCccC
Confidence 996 48988887543 3689999999999999999999999 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--ccc-------
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--VMS------- 589 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~------- 589 (658)
. ......+..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ...........+. ...
T Consensus 164 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 164 P--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred C--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 1 111223456899999875 45889999999999999999999999654321 1111111111100 000
Q ss_pred --cc-cCC-cCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 --YV-VDP-ELK---HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 --~~-~~~-~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ... ... .........+.+++.+|++.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 000 000 0001135667899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=283.17 Aligned_cols=264 Identities=19% Similarity=0.191 Sum_probs=193.1
Q ss_pred cccccCCCCeeEEEEEecC-----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
...||+|.||.||+|.-.+ ++.+|+|++....+ .++.. ....+|+.+++.++||||+.+..++...+. .+++
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS-~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~-~v~l 105 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGIS-MSACREIALLRELKHPNVISLVKVFLSHDK-KVWL 105 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcC-HHHHHHHHHHHHhcCCcchhHHHHHhccCc-eEEE
Confidence 4789999999999997543 33788998855432 22322 356799999999999999999999877432 7899
Q ss_pred EEEecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC----CCceecccc
Q 006178 438 VFDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKLVDFD 510 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFG 510 (658)
++||.+. ||.+.|+.++ ...++...+..|+.||+.|+.|||++ -|+||||||.|||+..+ |.+||+|||
T Consensus 106 ~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 106 LFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred Eehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeeccc
Confidence 9999987 9999997432 24689999999999999999999999 99999999999999877 899999999
Q ss_pred chhhhhhcCCCC-CCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcH-------HHHHHHh
Q 006178 511 SWKTILARSEKN-PGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-------VDWAKDY 581 (658)
Q Consensus 511 la~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-------~~~~~~~ 581 (658)
+++.+...-... .......+.+|+|||.+.+. .||++.||||.|||+.||+|-++-|.+.+..+ ..-+.+.
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 999986544332 23334457889999999874 59999999999999999999888775432111 0011111
Q ss_pred ---hcCC--ccccccc-CCcC---------CCCCH----H-------HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 582 ---LELP--EVMSYVV-DPEL---------KHFSY----D-------DLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 582 ---~~~~--~~~~~~~-~~~~---------~~~~~----~-------~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
+..+ +....+. -|+. ..... . -.+...+|+.++|+.||.+|.|+++.++..-
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 1110 0000000 0000 00000 0 0123779999999999999999999887653
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=310.01 Aligned_cols=265 Identities=20% Similarity=0.231 Sum_probs=201.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCceEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~~lv 438 (658)
+.||+|+||.||+|+++ .|+.||||...... .....+...+|+++|++++|+|||++++.-++.. .....+|
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 68999999999999965 68999999875433 2234567889999999999999999999876655 3367899
Q ss_pred EEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec--CCC--Cceeccccchh
Q 006178 439 FDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDF--SPKLVDFDSWK 513 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~--~~kl~DFGla~ 513 (658)
||||.+|||+.++.+-. ...|++.+.+.++.+++.||.|||++ +|+||||||.||++- ++| ..||+|||.|+
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 99999999999998533 24699999999999999999999999 999999999999984 334 46999999999
Q ss_pred hhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc--H--HHHHHHhhcCCccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--L--VDWAKDYLELPEVM 588 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~--~~~~~~~~~~~~~~ 588 (658)
.+.+.. ......++..|++||.+.. +.|+..+|.|||||++||++||..||...... . ..|.... ..+...
T Consensus 173 el~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~t-kkp~~v 248 (732)
T KOG4250|consen 173 ELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIIT-KKPSGV 248 (732)
T ss_pred cCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhc-cCCCce
Confidence 875443 2334456678999999994 88999999999999999999999999654432 1 2222211 111111
Q ss_pred ccccCCcC----------C---CCCHHHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHhhccCC
Q 006178 589 SYVVDPEL----------K---HFSYDDLKVICEVVNLCVNPDITKRP--SMQELCTMLEGRIDT 638 (658)
Q Consensus 589 ~~~~~~~~----------~---~~~~~~~~~~~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~ 638 (658)
.....+.. + .........+-.++..+|..+|.+|- ...+....+..|++.
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 11111111 1 11234455677888889999999998 777777777776654
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=296.19 Aligned_cols=258 Identities=19% Similarity=0.198 Sum_probs=191.8
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc---cCCCccceeeEEecCCC---Cc
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRESSP---FT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~---~~ 434 (658)
+.+.||+|+||.||+|+.+. ++.+|+|++...... ......+.+|+.+++++ +|+||+++++++...+. ..
T Consensus 3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred EEEEecccCceEEEEEEECCCCCEEEEEEecccccc--chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 34789999999999999874 788999988544321 12234566788877766 59999999999987652 12
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.+++|||+. ++|.+++.......+++..+..++.|+++||+|||+. +++|+||||+||++++++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 799999996 4899988765444699999999999999999999999 999999999999999999999999999876
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhc---CCcc----
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE---LPEV---- 587 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~---~~~~---- 587 (658)
+...... ....+...|+|||.+.+..++.++|||||||++|||+||++||...... +....... .+..
T Consensus 157 ~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 157 YSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--DQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred ccCCccc---ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--HHHHHHHHHcCCCChHhcC
Confidence 5322111 1112345689999999989999999999999999999999998654321 11111111 0000
Q ss_pred ---------cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 ---------MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 ---------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.............+.....+.+++.+||+.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000011112234567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=298.94 Aligned_cols=259 Identities=17% Similarity=0.145 Sum_probs=188.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC---CceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP---FTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~---~~~~l 437 (658)
.+.||+|+||.||+|... +++.||+|++...... ......+.+|+.+++++ +||||+++++++...+. ...++
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~l 83 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE--EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYL 83 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccc--cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEE
Confidence 478999999999999976 5788888876443221 12235678899999999 56999999998876542 12799
Q ss_pred EEEecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchh
Q 006178 438 VFDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWK 513 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~ 513 (658)
||||+++ +|.+++.... ...+++..+..++.||++||+|||++ +|+||||||+||+++. ++.+||+|||+++
T Consensus 84 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 84 VFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccce
Confidence 9999975 8998886432 23589999999999999999999999 9999999999999998 8899999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH--HhhcCCc--cc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK--DYLELPE--VM 588 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~--~~~~~~~--~~ 588 (658)
.+...... ......+..|+|||++.+ ..++.++||||||+++|||+||..||..... ...... .....+. ..
T Consensus 160 ~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 160 AFSIPVKS--YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-LQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred ecCCCccc--cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHHhCCCChhhC
Confidence 65322111 112233566999998865 4579999999999999999999999965432 111111 0000000 00
Q ss_pred cccc-------CCcCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 589 SYVV-------DPELK-----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 589 ~~~~-------~~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.... .+... ...+..+..+.+++.+||+.||++||++.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000 00000 001224566889999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=302.43 Aligned_cols=263 Identities=16% Similarity=0.170 Sum_probs=192.4
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|.+. ++..+|+|++...... ......+.+|+.+++++ +||||+++++++...+....++
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 334588999999999999976 5778899987543211 12234577899999999 9999999999987655446799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||++ ++|.+++..+ .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.+..
T Consensus 87 v~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 87 VFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred Eecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 999997 5999988754 589999999999999999999999 999999999999999999999999999887643
Q ss_pred cCCC---CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-------
Q 006178 518 RSEK---NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP------- 585 (658)
Q Consensus 518 ~~~~---~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~------- 585 (658)
.... .......++..|+|||.+.+ ..++.++||||||+++|||+||+.||...... ............
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES 239 (337)
T ss_pred ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 3221 11111223556899998765 55789999999999999999999999643321 100000000000
Q ss_pred -------cccccccCCcC---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 -------EVMSYVVDPEL---KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 -------~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........... .......+.++.+++.+||+.||++|||+.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000000 01111245678899999999999999999999976
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-35 Score=296.37 Aligned_cols=258 Identities=16% Similarity=0.203 Sum_probs=191.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||.|++|.||+|+.. ++..+|+|.+...... ...+.+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 78 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE---GTPSTAIREISLMKELKHENIVRLHDVIHTEN--KLMLVFE 78 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEecccccc---cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC--cEEEEEe
Confidence 3478999999999999986 5778899887543321 12345778999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+++ +|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9975 8998886543 24589999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--ccccc----
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--VMSYV---- 591 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~---- 591 (658)
... .....+..|++||.+.+ ..++.++|||||||++|||++|+.||...... ...-.......+. .....
T Consensus 155 ~~~--~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 155 NTF--SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred ccc--ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc
Confidence 111 11223456899998865 45789999999999999999999999654321 1110101000000 00000
Q ss_pred -cCCcC--------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 -VDPEL--------KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 -~~~~~--------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..... ....+..+..+.+++.+|++.||.+||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0111233567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=297.82 Aligned_cols=261 Identities=11% Similarity=0.143 Sum_probs=179.7
Q ss_pred hhhcccccCCCCeeEEEEEecCC---C-eEEEEEEeeeccccc-hh------hHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGG---P-EIAVISLCIKEEHWT-GY------LELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~---~-~vavk~~~~~~~~~~-~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
+.+.++||+|+||.||+|...++ . .+|+|.......... +. .......+...+..++|+|++++++++.
T Consensus 14 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~ 93 (294)
T PHA02882 14 WKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGS 93 (294)
T ss_pred eEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeee
Confidence 33458899999999999997654 3 444443222211100 00 0111223344556678999999999765
Q ss_pred cCCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCcee
Q 006178 429 ESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKL 506 (658)
Q Consensus 429 ~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl 506 (658)
.... ...++++|++.. ++.+.+.... ..++..+..|+.|+++||+|||+. +|+||||||+|||++.++.+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 94 FKRCRMYYRFILLEKLVE-NTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred EecCCceEEEEEEehhcc-CHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEE
Confidence 4331 245788888743 6776665432 357888999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhcCCC-----CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHH
Q 006178 507 VDFDSWKTILARSEK-----NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAK 579 (658)
Q Consensus 507 ~DFGla~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~ 579 (658)
+|||+|+.+...... .......++..|+|||...+..++.++|||||||++|||++|+.||...... ......
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 999999876432211 1111223567789999999999999999999999999999999999755321 111111
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
... ...+..+... ....+..+.+++..|++.+|++||++.++.+.++
T Consensus 248 ~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 248 CDF-----IKRLHEGKIK--IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHH-----HHHhhhhhhc--cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 000 0111111110 1123466889999999999999999999998763
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=297.58 Aligned_cols=259 Identities=19% Similarity=0.191 Sum_probs=189.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|++|.||+|+.. +++.+|+|++...... ....+.+.+|++++++++||||+++++++.+.. ..++|||
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 81 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED--EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--RLYLVFE 81 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc--ccchHHHHHHHHHHHhccCCCEeeEEEEEecCC--eEEEEEe
Confidence 3478999999999999976 5778999887443221 223356889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~ 519 (658)
|++ ++|.+++.......+++..+..++.||+.||+|||++ +++||||||+||++++ ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 5888888655544568888999999999999999999 9999999999999985 4578999999987543221
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHH--hhcCC-ccc-c-----
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD--YLELP-EVM-S----- 589 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~--~~~~~-~~~-~----- 589 (658)
... ....+...|+|||++.+ ..++.++|||||||++|||+||+.||...... ...... ....+ ... .
T Consensus 158 ~~~--~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 158 RTF--THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred ccc--ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccccccc
Confidence 111 11123456899998876 45789999999999999999999999654321 111110 00000 000 0
Q ss_pred -c---c----cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 -Y---V----VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 -~---~----~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. . .........+..+..+.+++.+|++.+|++||++.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 0000000112234568899999999999999999999863
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=324.43 Aligned_cols=257 Identities=22% Similarity=0.289 Sum_probs=188.7
Q ss_pred HHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC-
Q 006178 356 EVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS- 431 (658)
Q Consensus 356 ~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~- 431 (658)
.+.-.+|+ +.||+||||.|||++.+ ||+.+||||+..+. ....-..+.+|+..+.+++|||||++|..+.+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 44556676 78999999999999987 89999999997664 2233456889999999999999999985432100
Q ss_pred --------------------------------------------------------------------------------
Q 006178 432 -------------------------------------------------------------------------------- 431 (658)
Q Consensus 432 -------------------------------------------------------------------------------- 431 (658)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred ------------------------------------CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 006178 432 ------------------------------------PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL 475 (658)
Q Consensus 432 ------------------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL 475 (658)
+...||-||||+...++++++++.... .....++++++|++||
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGL 710 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHH
Confidence 013578899999877888877553211 3677889999999999
Q ss_pred HHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh----------------hcCCCCCCcccccCccccCCccc
Q 006178 476 KYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL----------------ARSEKNPGTLGSQGAICILPSSL 539 (658)
Q Consensus 476 ~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~----------------~~~~~~~~~~~~~~~~~~aPE~~ 539 (658)
+|+|++ +||||||||.||++|++..+||+|||+|.... ........+...++..|+|||.+
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998722 00111123445667889999998
Q ss_pred ccC---CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccC
Q 006178 540 EAR---HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVN 616 (658)
Q Consensus 540 ~~~---~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 616 (658)
.+. .|+.|+|+||+|||++||+. ||...-+ -+.... .++.+. +. .-..+..+....-.++|.++++
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME-Ra~iL~-~LR~g~-iP-----~~~~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME-RASILT-NLRKGS-IP-----EPADFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHH-HHHHHH-hcccCC-CC-----CCcccccccchHHHHHHHHHhc
Confidence 764 49999999999999999995 4542211 111111 111111 11 0012233344445689999999
Q ss_pred CCCCCCCCHHHHHH
Q 006178 617 PDITKRPSMQELCT 630 (658)
Q Consensus 617 ~dP~~RPs~~evl~ 630 (658)
.||.+|||+.|+++
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999985
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=287.30 Aligned_cols=260 Identities=20% Similarity=0.309 Sum_probs=197.4
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc--cCCCccceeeEEecCCC--CceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLLGYCRESSP--FTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~~~--~~~~l 437 (658)
..+.||+|.||.||+|++++ ..||||.+...+ ++.+.+|.+|.+.+ +|+||+.+++.-..++. .+.+|
T Consensus 215 L~e~IGkGRyGEVwrG~wrG-e~VAVKiF~srd-------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 215 LQEIIGKGRFGEVWRGRWRG-EDVAVKIFSSRD-------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred EEEEecCccccceeeccccC-CceEEEEecccc-------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 34899999999999999965 689999985433 34678899988765 99999999986433322 16899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-----cCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-----ELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-----~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
|.+|-+.|||+|||.+. .++.+..++++.-+|.||+|||. +..|.|.|||||+.|||+..++.+-|+|+|+|
T Consensus 287 vTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred eeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 99999999999999864 58999999999999999999995 35789999999999999999999999999999
Q ss_pred hhhhhcCCC--CCCcccccCccccCCcccccCC----CC--ccccchhhHHHHHHHHhC----------CCCCCCC---C
Q 006178 513 KTILARSEK--NPGTLGSQGAICILPSSLEARH----LD--VQGNIYAFGVLLLEIISG----------RPPCCKD---K 571 (658)
Q Consensus 513 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~----~~--~ksDVwS~Gvvl~elltG----------~~p~~~~---~ 571 (658)
......... .......++.+|||||++.... +. ..+||||||.|+||+... +.||++- +
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D 443 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD 443 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence 876544321 2234456678999999986432 21 478999999999999872 4576532 1
Q ss_pred CcHHHHHHHhhcCCcccccccCCcCC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 572 GNLVDWAKDYLELPEVMSYVVDPELK--HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
....++ +... ..+-+.|... -...+....+.++|+.||..+|..|-|+--|-+.|.++.+.
T Consensus 444 Ps~eeM-rkVV-----Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 444 PSFEEM-RKVV-----CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred CCHHHH-hcce-----eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 222211 1110 0111122221 12456677899999999999999999999999999988753
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=286.73 Aligned_cols=246 Identities=18% Similarity=0.274 Sum_probs=194.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|++|.||++... ++..+++|++..... ...+.+.+|++++++++|+|++++++++.... ..++++||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l~~e~ 78 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKD--ELWIVMEF 78 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEec
Confidence 478999999999999986 677888888754332 23467899999999999999999999998876 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.+||+|||.+........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 79 CSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 99999999987653 3589999999999999999999998 999999999999999999999999998876543221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....+...|++||.+.+..++.++||||||+++|+|++|+.||.......... .... ....... .+.
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~--~~~~~~~------~~~ 221 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF--KIAT--NGPPGLR------NPE 221 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHHh--cCCCCcC------ccc
Confidence 112223456899999988889999999999999999999999986543211111 1100 0000000 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.||++|||+.|+++.
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 124668899999999999999999998763
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=291.89 Aligned_cols=244 Identities=15% Similarity=0.108 Sum_probs=184.3
Q ss_pred cccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHH---HHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 365 IIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA---DLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~---~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.||+|+||.||+|+.. +++.||+|.+..+..... .....+..|.. .++..+||||+++++++.+.+ ..++|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc-hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--EEEEEEe
Confidence 4899999999999975 578899998765432211 11222334443 444558999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||++..+....
T Consensus 78 ~~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~- 151 (278)
T cd05606 78 LMNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (278)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC-
Confidence 999999999887543 599999999999999999999999 99999999999999999999999999987543221
Q ss_pred CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....++..|+|||.+.++ .++.++||||+||++|||++|+.||................. ... ..
T Consensus 152 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~~~---~~ 218 (278)
T cd05606 152 ---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-------MAV---EL 218 (278)
T ss_pred ---CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc-------cCC---CC
Confidence 1122345679999998754 689999999999999999999999975432111111110000 011 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-----SMQELCT 630 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~ 630 (658)
+...+..+.+++.+|+..+|.+|| ++.|+++
T Consensus 219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 222346788999999999999999 8988875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=294.02 Aligned_cols=247 Identities=17% Similarity=0.169 Sum_probs=193.0
Q ss_pred ccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||+|+||.||+++..+ ++.+++|.+..... ......+.+.+|++++++++||||+++++.+.... ..+++|||+++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~~ 77 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK--NLYLVMEYLPG 77 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh-hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc--EEEEEEecCCC
Confidence 6899999999999874 78889988754332 12234567899999999999999999999988776 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC---
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK--- 521 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~--- 521 (658)
++|.+++.+.. .+++..+..++.|+++||+|||+. +++||||+|+||++++++.+||+|||++.........
T Consensus 78 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 78 GDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 99999997644 589999999999999999999999 9999999999999999999999999988764322110
Q ss_pred ---CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 ---NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ---~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
...........|++||.......+.++||||||+++||++||+.||..... ........... . .
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~~~--~---------~ 219 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--EEIFQNILNGK--I---------E 219 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCC--c---------C
Confidence 011122334568999999888899999999999999999999999965432 11111111100 0 0
Q ss_pred CCHH--HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 599 FSYD--DLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 599 ~~~~--~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
.+.. .+..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 1111 2567889999999999999999966665554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=291.02 Aligned_cols=247 Identities=17% Similarity=0.166 Sum_probs=197.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+++.. ++..+++|++...... ......+.+|++++++++|+||+++++++.+.. ..++|||
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 79 (256)
T cd08530 4 VLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS--QKEREDAVNEIRILASVNHPNIISYKEAFLDGN--KLCIVME 79 (256)
T ss_pred EeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc--HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC--EEEEEeh
Confidence 3478999999999999865 5678888887543321 233456789999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|+++++|.+++... ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||+++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 99999999998652 224689999999999999999999999 9999999999999999999999999998876443
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
......+...|++||.+.+..++.++|+||||+++|||++|+.||...+.. ....... ......
T Consensus 157 ----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~----------~~~~~~ 220 (256)
T cd08530 157 ----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQ----------RGKYPP 220 (256)
T ss_pred ----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh----------cCCCCC
Confidence 111223456789999999989999999999999999999999999654321 1111111 111122
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+...+..+.+++.+|++.+|++||++.|+++.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 333556778999999999999999999999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=290.23 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=197.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||++... ++..+++|++..... .....+.+.+|++++++++|+|++++++.+...+ ..++|+||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--~~~lv~e~ 80 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEKG--KLCIVMEY 80 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC--EEEEEEEe
Confidence 478999999999999986 577888888754332 2234567889999999999999999999998876 78999999
Q ss_pred cCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
+++++|.+++.... ...+++.++..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 34699999999999999999999999 99999999999999999999999999887654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......+...|+|||...+..++.++||||+|+++|+|++|+.||...+ .......... ......
T Consensus 158 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--~~~~~~~~~~----------~~~~~~ 223 (258)
T cd08215 158 D--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--LLELALKILK----------GQYPPI 223 (258)
T ss_pred c--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc--HHHHHHHHhc----------CCCCCC
Confidence 1 1122234566999999988889999999999999999999999986543 2222221111 111122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||..+|++|||+.|+++.
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22344678899999999999999999998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=280.61 Aligned_cols=265 Identities=18% Similarity=0.270 Sum_probs=200.0
Q ss_pred cHHHHHHHHhhhcccccCCCCeeEEEEE-ecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEe
Q 006178 351 SRQELEVACEDFSNIIGSSPDSLVYKGT-MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCR 428 (658)
Q Consensus 351 ~~~~l~~~~~~f~~~lG~G~~g~Vy~~~-~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~ 428 (658)
+++|+-+.|. +.||+|+|+.|--++ ..+|.++|||.+.+. .++.+.+..+|++++.++ .|+||++++++|+
T Consensus 74 ~F~d~YkLt~---e~LGeGAyasVqtcv~i~t~~EYAVKiidKq----~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 74 KFEDMYKLTS---ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ----PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred hHHHHHHhHH---HHhcCccceeeeeeeeeccchhhhhhhhhcC----CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 3567766664 689999999999887 468899999998433 456678899999999999 6999999999999
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cce
Q 006178 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPK 505 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~k 505 (658)
++. ..|||||-|.||+|..+|.++. .+++.++.++.++|+.||.|||.+ +|.|||+||+|||..+.. -+|
T Consensus 147 dd~--~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 147 DDT--RFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred ccc--eEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 998 6699999999999999998654 499999999999999999999999 999999999999997654 379
Q ss_pred eccccchhhhhhcCCC-----CCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH
Q 006178 506 LVDFDSWKTILARSEK-----NPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575 (658)
Q Consensus 506 l~DFGla~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~ 575 (658)
|+||.+..-+.....- ..-....+...|||||+.. ...|+.++|.||+|||+|-|+.|.+||.+.-+...
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 9999886543321111 1112234567799999864 24689999999999999999999999975432222
Q ss_pred HHHHHhhc--CCcc-cccccCCcCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 576 DWAKDYLE--LPEV-MSYVVDPELKHFSY----DDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 576 ~~~~~~~~--~~~~-~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.|-+...- -+.. ...+.+... ++|. ..+.+..+++...+..|+.+|-++.++++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkY-eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKY-EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCC-cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 22110000 0000 011111111 2332 34567789999999999999999999987
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=294.81 Aligned_cols=243 Identities=18% Similarity=0.266 Sum_probs=191.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
.+||+|+||.||++... ++..+|+|++.... ......+.+|+.++++++|+||+++++++...+ ..++||||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC--EEEEEEecC
Confidence 57999999999999885 67889998874322 223556889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++++|.+++... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.........
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~- 172 (292)
T cd06657 100 EGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 172 (292)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccc-
Confidence 999999987543 489999999999999999999999 9999999999999999999999999987654322211
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|++||.+.+..++.++|||||||++|||++|..||...... ......... .+.... ..
T Consensus 173 -~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~----------~~~~~~-~~ 240 (292)
T cd06657 173 -RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----------PPKLKN-LH 240 (292)
T ss_pred -ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC----------CcccCC-cc
Confidence 11223345689999998888999999999999999999999998643321 111111110 111111 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.+|.+||++.|+++.
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 233557799999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=304.36 Aligned_cols=255 Identities=18% Similarity=0.174 Sum_probs=189.5
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~l 437 (658)
.+.||+|+||.||+|+.. +++.+|+|.+..... .....+.+.+|+.++++++||||+++++++..... ...++
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 98 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ--NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYL 98 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCcccc--ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEE
Confidence 488999999999999976 678899998743221 12233567789999999999999999998864431 24699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+. ++|.+.+... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 v~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 99 VMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred EEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 999995 5888887633 88999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh--hcCC----------
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--LELP---------- 585 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~---------- 585 (658)
... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+. ...|.... ...+
T Consensus 171 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T cd07850 171 SFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEFMSRLQP 246 (353)
T ss_pred CCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhh
Confidence 211 1112334568999999999999999999999999999999999965431 11111100 0000
Q ss_pred ---------c-----ccccccCCcC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 ---------E-----VMSYVVDPEL-----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 ---------~-----~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .......... .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0000000000 00012345668899999999999999999999865
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=317.44 Aligned_cols=265 Identities=14% Similarity=0.115 Sum_probs=181.2
Q ss_pred hhhcccccCCCCeeEEEEEecCC--CeEEEEEE-------------eeeccccchhhHHHHHHHHHHHHhccCCCcccee
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGG--PEIAVISL-------------CIKEEHWTGYLELYFQREVADLARINHENTGKLL 424 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~--~~vavk~~-------------~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~ 424 (658)
+.+.+.||+|+||+||++..+.. ...+.|.+ ..+...........+.+|+.++++++||||++++
T Consensus 150 Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~ 229 (501)
T PHA03210 150 FRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIE 229 (501)
T ss_pred cEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEe
Confidence 44458999999999999876432 11121110 1111111222345688999999999999999999
Q ss_pred eEEecCCCCceEEEEEecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC
Q 006178 425 GYCRESSPFTRMLVFDYASNGTLYEHLHYGE---RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 425 ~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 501 (658)
+++.+.+ ..++|+|++. ++|.+++.... .......++..|+.||+.||+|||++ +|+||||||+|||++.+
T Consensus 230 ~~~~~~~--~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 230 EILRSEA--NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCD 303 (501)
T ss_pred EEEEECC--eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC
Confidence 9998877 7799999995 58888775432 11234667788999999999999999 99999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCC-CCCCCCcHHHHHHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP-CCKDKGNLVDWAKD 580 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p-~~~~~~~~~~~~~~ 580 (658)
+.+||+|||+++.+...... ......++..|+|||++.+..++.++|||||||++|||++|..+ +.........-...
T Consensus 304 ~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 99999999999865432211 11122346779999999999999999999999999999998754 43322211111111
Q ss_pred hhcC----Cccc-------ccccC-CcCC----CCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 581 YLEL----PEVM-------SYVVD-PELK----HFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 581 ~~~~----~~~~-------~~~~~-~~~~----~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.... .... ...++ .... ..+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1100 0000 00000 0000 000 0122456788999999999999999999874
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=296.28 Aligned_cols=263 Identities=18% Similarity=0.207 Sum_probs=188.3
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC------C
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------F 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~ 433 (658)
.+.+.||+|+||.||+|+.. +++.+|+|++...... ......+.+|++++++++||||+++++++...+. .
T Consensus 15 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 92 (310)
T cd07865 15 EKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG 92 (310)
T ss_pred EEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc--CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence 34578999999999999976 5788999887543321 1223356789999999999999999999876431 1
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..++||||+. ++|.+++.... ..+++.++..++.|++.||+|||++ +++|+||||+||+++.++.+||+|||++.
T Consensus 93 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 93 SFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred eEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 4599999996 48888886543 2589999999999999999999999 99999999999999999999999999987
Q ss_pred hhhhcCCCC--CCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhc-CC-cc
Q 006178 514 TILARSEKN--PGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLE-LP-EV 587 (658)
Q Consensus 514 ~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~-~~-~~ 587 (658)
.+....... .......+..|+|||.+.+. .++.++||||||+++|||+||+.||...... .......... .+ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 654322211 11112234568999988664 4789999999999999999999998654321 1111111100 00 00
Q ss_pred cccc---------cCCc-CC-CC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 MSYV---------VDPE-LK-HF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 ~~~~---------~~~~-~~-~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.... ..+. .. .. +......+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 0000 00 00 0011245679999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=294.70 Aligned_cols=261 Identities=19% Similarity=0.209 Sum_probs=192.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|++.... ......+.+.+|++++++++|+|++++++++.+......++|||
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 3 KIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred eeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 3478999999999999987 47788998886543 11223456889999999999999999999998772227899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++ +|.+++.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9975 9999887543 3689999999999999999999999 999999999999999999999999999876543321
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--cccccc-----
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMSYV----- 591 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~----- 591 (658)
. .......+..|+|||.+.+ ..++.++||||||+++|||+||+.||...... ...........+ ......
T Consensus 156 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 A-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred c-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 1 1112223566999998765 45789999999999999999999999654321 111111111100 000000
Q ss_pred ---cCCc------CCC-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 ---VDPE------LKH-FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ---~~~~------~~~-~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+. +.. +...++..+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000 000 00112567889999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=277.69 Aligned_cols=247 Identities=16% Similarity=0.204 Sum_probs=191.6
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecC--CCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES--SPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~--~~~~~~lv~ 439 (658)
++||-|-.|.|-.+.++ .+..+|+|.+... ...++|+++.-+. .|||||.++++|++. +.....+||
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm 138 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS---------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM 138 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC---------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence 78999999999999987 5677888776321 2356899987766 799999999998653 222678999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 516 (658)
|.|+||.|...+..++...+++.++..|++||+.|+.|||+. +|.||||||+|+|... +-.+||+|||+|+.-.
T Consensus 139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccC
Confidence 999999999999988888899999999999999999999999 9999999999999974 4578999999998643
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 595 (658)
. ...-.....++.|.|||++-..+|+..+|+||+||++|-|+.|.+||+...+.. ..-+++..... ...+-+++
T Consensus 216 ~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g--qy~FP~pE 290 (400)
T KOG0604|consen 216 E---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG--QYEFPEPE 290 (400)
T ss_pred C---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc--CccCCChh
Confidence 2 122223344677899999999999999999999999999999999997543210 00011111000 00011111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
-...++...++|+.+|..+|++|.|+.|+++.
T Consensus 291 ----Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 291 ----WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ----HhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 12456778999999999999999999999875
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=294.34 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=187.4
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|.+.+ ++.+|+|.+...... .....+.+|+.++.+. .||||+++++++.+.. ..++|
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v 92 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK---EENKRILMDLDVVLKSHDCPYIVKCYGYFITDS--DVFIC 92 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh---HHHHHHHHHHHHHHhccCCCchHhhheeeecCC--eEEEE
Confidence 345899999999999999875 788899887543211 2234566788777777 5999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|||+. +++.+++..... .+++..+..++.|+++||+|||+ . +|+||||+|+||++++++.+||+|||++..+..
T Consensus 93 ~e~~~-~~l~~l~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 93 MELMS-TCLDKLLKRIQG-PIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eeccC-cCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 99985 477777654332 68999999999999999999997 5 899999999999999999999999999876532
Q ss_pred cCCCCCCcccccCccccCCcccccCC----CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARH----LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
.... ....+...|+|||.+.+.. ++.++||||||+++|||++|+.||....... +.......... .
T Consensus 168 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~--~---- 237 (296)
T cd06618 168 SKAK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-EVLTKILQEEP--P---- 237 (296)
T ss_pred CCcc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-HHHHHHhcCCC--C----
Confidence 2111 1122345689999987654 8899999999999999999999996432221 11111111100 0
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
... .....+.++.+++.+||+.||++||++.++++.-
T Consensus 238 -~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 238 -SLP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -CCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 000 0112345688999999999999999999998763
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=294.80 Aligned_cols=262 Identities=20% Similarity=0.222 Sum_probs=190.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC--------
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS-------- 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-------- 431 (658)
.+.+.||+|+||.||+|... ++..+|+|.+...... ......+.+|++++++++||||+++++++.+..
T Consensus 10 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~ 87 (302)
T cd07864 10 DIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKD 87 (302)
T ss_pred heeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc--cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcccc
Confidence 34589999999999999986 5778888887544321 222346778999999999999999999987643
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccc
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 511 (658)
....++|+||+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 88 ~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 88 KGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred CCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCcccc
Confidence 2267999999975 787777654 23589999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcC--Ccc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLEL--PEV 587 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~--~~~ 587 (658)
+......... ..........|++||.+.+ ..++.++|||||||++|||++|++||...... ....+...... +..
T Consensus 163 ~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T cd07864 163 ARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAV 241 (302)
T ss_pred cccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 8765432211 1111223456999998865 45789999999999999999999999654321 11111111100 000
Q ss_pred ccccc--------C------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 MSYVV--------D------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 ~~~~~--------~------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...+. + ..........+..+.+++.+||+.||++||++.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 242 WPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred cccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 0 0000011123567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=295.72 Aligned_cols=250 Identities=18% Similarity=0.198 Sum_probs=191.2
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. ++..+++|.+...... .....+++.+|++++++++|+|++++++++.... ..++||||
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 96 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEY 96 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--eeEEEEEc
Confidence 368999999999999976 5677888877532221 2223456889999999999999999999998876 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+. |++.+++.... ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 97 CL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred cC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 96 68888775433 3589999999999999999999999 9999999999999999999999999988654321
Q ss_pred CCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
....++..|+|||.+. ...++.++|||||||++|||++|+.||....... ........ . .+..
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~-~------~~~~-- 234 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQN-E------SPAL-- 234 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--HHHHHhhc-C------CCCc--
Confidence 1122345699999974 3568899999999999999999999986432211 11111100 0 0110
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.....+..+.+++.+||+.+|++||++.++++.-.....
T Consensus 235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 112344668899999999999999999999987654443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=293.37 Aligned_cols=258 Identities=21% Similarity=0.226 Sum_probs=190.3
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+..+ ++.+++|++...... .......+|+..+++++ |+||+++++++.+.+ ..++||
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~ 77 (283)
T cd07830 3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFREND--ELYFVF 77 (283)
T ss_pred eheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC--cEEEEE
Confidence 45789999999999999864 677888887543321 12234567999999998 999999999998866 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+ +|+|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......
T Consensus 78 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 78 EYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred ecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 999 78999998866544689999999999999999999999 99999999999999999999999999887653221
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCC------------
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELP------------ 585 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~------------ 585 (658)
.. ....+...|+|||.+.. ..++.++||||||+++|||++|+.||....... ..........+
T Consensus 154 ~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 154 PY---TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred Cc---CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence 11 11223456899998754 558999999999999999999999986543211 11011100000
Q ss_pred cccccccC----CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 EVMSYVVD----PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 ~~~~~~~~----~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........ .............+.+++.+||+.+|++|||+.|++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000 00000111124678899999999999999999998753
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=294.07 Aligned_cols=256 Identities=20% Similarity=0.222 Sum_probs=193.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|++|.||+|... ++..+++|++...... ......+.+|++++++++|+||+++++++...+ ..++||||
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~ 79 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES--EGIPKTALREIKLLKELNHPNIIKLLDVFRHKG--DLYLVFEF 79 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEecccccc--chhHHHHHHHHHHHHHhcCCCcchHHHhhccCC--CEEEEEec
Confidence 467999999999999976 6778888887543322 123457889999999999999999999998876 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~- 153 (283)
T cd05118 80 MDT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR- 153 (283)
T ss_pred cCC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-
Confidence 975 8988887543 3689999999999999999999999 999999999999999999999999998876543221
Q ss_pred CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcCC--ccccccc----
Q 006178 522 NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLELP--EVMSYVV---- 592 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~~--~~~~~~~---- 592 (658)
..........|++||.+.+. .++.++||||||+++|+|+||+.||...+. .... .......+ .......
T Consensus 154 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 154 -PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-IDQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred -cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCchHhcccchhhhh
Confidence 11112234568899998876 789999999999999999999999965432 1111 11111000 0000000
Q ss_pred ----------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 593 ----------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 593 ----------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
........+..+..+.+++.+||+.||.+||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00001112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=293.63 Aligned_cols=250 Identities=16% Similarity=0.153 Sum_probs=190.2
Q ss_pred hcccccCCCCeeEEEEEe----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+++. .+|..+|+|.+............+.+.+|+++++++ +|+||+++++++.... ..+
T Consensus 4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~ 81 (290)
T cd05613 4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT--KLH 81 (290)
T ss_pred eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--eEE
Confidence 347899999999999986 367889998875432222223345688999999999 6999999999998776 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 82 LILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 9999999999999997543 488999999999999999999999 99999999999999999999999999987653
Q ss_pred hcCCCCCCcccccCccccCCcccccC--CCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCccccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEAR--HLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 592 (658)
..... ......+...|+|||.+... .++.++||||||+++|||+||+.||..... ....+........
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~------- 228 (290)
T cd05613 157 EDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------- 228 (290)
T ss_pred ccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC-------
Confidence 22111 11122345568999998753 478899999999999999999999864321 2222222211110
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCT 630 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~ 630 (658)
...+......+.+++.+||+.||++|| ++.+++.
T Consensus 229 ----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 ----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 112223345678999999999999997 5565544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=287.46 Aligned_cols=246 Identities=19% Similarity=0.286 Sum_probs=196.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|++|.||+++.. +++.+++|.+...... ....+.+.+|++++++++|+|++++++++.+.+ ..+++||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 79 (254)
T cd06627 4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD--SLYIILE 79 (254)
T ss_pred eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC--EEEEEEe
Confidence 3578999999999999876 5678888888554322 234567999999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 80 YAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred cCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 999999999997553 589999999999999999999999 999999999999999999999999999886643322
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .........|++||...+..++.++||||+|+++|+|++|+.||.........+... . . .....+
T Consensus 155 ~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~--~--------~~~~~~ 220 (254)
T cd06627 155 D--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV--Q--D--------DHPPLP 220 (254)
T ss_pred c--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh--c--c--------CCCCCC
Confidence 1 111233556999999988889999999999999999999999986543222111111 0 0 011122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...+..+.+++.+||+.+|++|||+.|++.
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 221 EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 233467889999999999999999999875
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=279.14 Aligned_cols=258 Identities=17% Similarity=0.234 Sum_probs=195.4
Q ss_pred cccHHHHHHHHhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeE
Q 006178 349 RFSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGY 426 (658)
Q Consensus 349 ~~~~~~l~~~~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~ 426 (658)
.|+.++++.. ..||.|+||+|+|-.++ .|+..|||++..... ...+++++.|.+...+- +.||||++||.
T Consensus 60 ~F~~~~Lqdl-----g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~---~keq~rll~e~d~~mks~~cp~IVkfyGa 131 (361)
T KOG1006|consen 60 TFTSDNLQDL-----GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI---EKEQKRLLMEHDTVMKSSNCPNIVKFYGA 131 (361)
T ss_pred ccccchHHHH-----HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc---hHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence 4666666644 46999999999999886 688999999865432 35567899999877666 79999999998
Q ss_pred EecCCCCceEEEEEecCCCChhhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 427 CRESSPFTRMLVFDYASNGTLYEHLH---YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 427 ~~~~~~~~~~lv~E~~~~gsL~~~l~---~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
+..++ ..|+.||.|+- ||..+.+ ...+..+++...-+|..-.++||.||.... .|||||+||+|||+|..|.
T Consensus 132 ~F~EG--dcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~ 206 (361)
T KOG1006|consen 132 LFSEG--DCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGD 206 (361)
T ss_pred hhcCC--ceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCC
Confidence 88777 68999999954 7665443 233446899988999999999999999764 8999999999999999999
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 581 (658)
+||||||++..+..... .+...+-..|||||.+.. ..|+.++||||+|++|||+.||+.||..-.....+...-.
T Consensus 207 vKLCDFGIcGqLv~SiA---kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv 283 (361)
T KOG1006|consen 207 VKLCDFGICGQLVDSIA---KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV 283 (361)
T ss_pred EeeecccchHhHHHHHH---hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH
Confidence 99999999877653322 122233456999999864 3489999999999999999999999865333222221111
Q ss_pred hcCCcccccccCCcCCCCCH---HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 582 LELPEVMSYVVDPELKHFSY---DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+. ....+. +....+..++..|+.+|-.+||...++.+.
T Consensus 284 ~gdpp---------~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 284 IGDPP---------ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCCCC---------eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11111 111122 245678899999999999999999988764
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=301.21 Aligned_cols=259 Identities=19% Similarity=0.228 Sum_probs=189.5
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~lv 438 (658)
+.||+|+||.||+|+.. ++..+|+|++..... .......+.+|++++++++||||+++++++..... ...++|
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 98 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ--SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLV 98 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCccc--cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEE
Confidence 78999999999999975 678899998754321 12233467899999999999999999999875431 146899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
+||+.. +|.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 99 MPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred eccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 999964 7777653 2489999999999999999999999 9999999999999999999999999998754211
Q ss_pred CCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhc---CC--ccc----
Q 006178 519 SEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE---LP--EVM---- 588 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~---~~--~~~---- 588 (658)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+ ..... .+ ...
T Consensus 171 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd07879 171 -----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQL-TQILKVTGVPGPEFVQKLE 243 (342)
T ss_pred -----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHH-HHHHHhcCCCCHHHHHHhc
Confidence 111123456899999876 4689999999999999999999999975431 1111 11000 00 000
Q ss_pred ----cccc-------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhccCCC
Q 006178 589 ----SYVV-------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRIDTS 639 (658)
Q Consensus 589 ----~~~~-------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~~ 639 (658)
.... ...+....+.....+.+++.+||+.||++||++.|++.. ++...+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 244 DKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred ccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 0000 000000001234567899999999999999999999965 77766543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=301.08 Aligned_cols=244 Identities=18% Similarity=0.193 Sum_probs=195.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|.|+.|..|++. .+.+||+|.+.+.... ....+.+.+|+++|..++|||||+++.+..... ..|+||||
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln--~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~--~lylV~ey 136 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN--PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA--TLYLVMEY 136 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccC--hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc--eeEEEEEe
Confidence 478999999999999986 5789999977544322 223344889999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.+|.+++++.++++ +.+..+..++.|+.+|++|+|++ .|||||||++||||+.+.++||+|||++..+....
T Consensus 137 a~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~-- 209 (596)
T KOG0586|consen 137 ASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL-- 209 (596)
T ss_pred ccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecccc--
Confidence 999999999998775 67788999999999999999999 99999999999999999999999999998765222
Q ss_pred CCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......+.+.|.|||.+.+.+| ++++|+||+|+++|-|+.|..||++..- ... -..++...+ ..+
T Consensus 210 -~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--k~L----------r~rvl~gk~-rIp 275 (596)
T KOG0586|consen 210 -MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--KEL----------RPRVLRGKY-RIP 275 (596)
T ss_pred -cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--ccc----------cchheeeee-ccc
Confidence 1222334567889999999876 5899999999999999999999975321 110 011111111 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....++.+++++++..+|.+|++++++.+.
T Consensus 276 ~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 276 FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 2233456799999999999999999999865
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=287.05 Aligned_cols=231 Identities=19% Similarity=0.157 Sum_probs=178.0
Q ss_pred ccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEecC
Q 006178 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYAS 443 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~~~ 443 (658)
||+|+||.||+++.+ ++..+|+|........ . .|+.....+ +||||+++++++...+ ..++||||++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-------~--~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~iv~e~~~ 92 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-------A--IEPMVHQLMKDNPNFIKLYYSVTTLK--GHVLIMDYIK 92 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-------h--hhHHHHHHhhcCCCEEEEEEEEecCC--eeEEEEEcCC
Confidence 599999999999976 4566777765432211 0 122222222 7999999999998877 7899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-CceeccccchhhhhhcCCCC
Q 006178 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 444 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~~~ 522 (658)
+|+|.+++.... .+++.++..++.|+++||+|||+. +++||||||+||+++.++ .++|+|||+++......
T Consensus 93 ~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~--- 164 (267)
T PHA03390 93 DGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS--- 164 (267)
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc---
Confidence 999999997654 599999999999999999999999 999999999999999998 99999999887543211
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH---HHHHHHhhcCCcccccccCCcCCCC
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL---VDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
...++..|+|||++.+..++.++|||||||++|||++|+.||....... ..+.... .. ....
T Consensus 165 ---~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~-----------~~~~ 229 (267)
T PHA03390 165 ---CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK-----------KLPF 229 (267)
T ss_pred ---cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc-----------cCCc
Confidence 1224566999999999899999999999999999999999997443322 1121111 00 0011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPS-MQELCT 630 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~ 630 (658)
....+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 230 IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 2234567889999999999999996 688874
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=300.13 Aligned_cols=261 Identities=16% Similarity=0.172 Sum_probs=191.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC--CCceEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVF 439 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~~~lv~ 439 (658)
.+.||+|+||.||+|... ++..||+|++...... ....+.+.+|+.++++++||||+++++++.... ....++||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 87 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV--PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVM 87 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc--ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEE
Confidence 478999999999999976 5788999987543221 223456778999999999999999999876432 22679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+. |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 88 e~~~-~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 88 DLME-SDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred ehhh-hhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 9995 69999987544 489999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCC--cccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCC--cccc----
Q 006178 520 EKNPG--TLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELP--EVMS---- 589 (658)
Q Consensus 520 ~~~~~--~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~--~~~~---- 589 (658)
..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+... ..........+ ....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 11111 11234556899999765 468999999999999999999999996543211 11111111000 0000
Q ss_pred ----cccC--CcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 ----YVVD--PELKHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ----~~~~--~~~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.... +..... ....+..+.+++.+||+.+|++||++.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000 000011 12235778999999999999999999998875
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=292.47 Aligned_cols=243 Identities=21% Similarity=0.239 Sum_probs=187.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+|+.. ++..+++|++...... .....+.+.+|++++++++|||++++++++.+.. ..++||||+
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 103 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH--TAWLVMEYC 103 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEEecC
Confidence 67999999999999975 5678888877543222 2223456889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
. |++.+++.... ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++.....
T Consensus 104 ~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 104 L-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred C-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 5 58888876433 3589999999999999999999999 999999999999999999999999998754211
Q ss_pred CCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 523 PGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....+...|+|||++. ...++.++|||||||++|||++|..||...... ......... .. +.. .
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~--~~-----~~~--~ 241 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQN--DS-----PTL--Q 241 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhc--CC-----CCC--C
Confidence 11123345689999984 456889999999999999999999998654321 111111110 00 000 0
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+++.+||+.+|.+||++.++++.
T Consensus 242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11223557899999999999999999999965
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=297.96 Aligned_cols=261 Identities=17% Similarity=0.150 Sum_probs=190.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccch----------hhHHHHHHHHHHHHhccCCCccceeeEEecCC
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTG----------YLELYFQREVADLARINHENTGKLLGYCRESS 431 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 431 (658)
.+.||+|+||.||+|... +++.+|+|++......... .....+.+|++++++++|+||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 367999999999999976 5788999987543321100 01124778999999999999999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccc
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 511 (658)
..++||||++ |+|.+++.... .+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 94 --~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 94 --FINLVMDIMA-SDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred --cEEEEEeccc-cCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccc
Confidence 7899999996 69999987543 489999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhcCC------------CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHH
Q 006178 512 WKTILARSE------------KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDW 577 (658)
Q Consensus 512 a~~~~~~~~------------~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~ 577 (658)
++....... ............|+|||.+.+. .++.++|||||||++|||+||+.||...+.. ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 245 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGR 245 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 876541110 0001111234568999998764 4789999999999999999999999754421 1111
Q ss_pred HHHhhcCCcc--ccc------------ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 578 AKDYLELPEV--MSY------------VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 578 ~~~~~~~~~~--~~~------------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+......+.. ... ...+.........+..+.+++.+||+.+|++||+++|++..
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1111111000 000 00000001112234668899999999999999999999874
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=297.41 Aligned_cols=266 Identities=15% Similarity=0.178 Sum_probs=195.0
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~lv 438 (658)
.+.||+|+||.||+|+.. ++..||+|++...... ......+.+|+.++++++|+||+++++++..... ...++|
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 87 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN--RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIV 87 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccc--cchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEE
Confidence 378999999999999975 5788999987543221 2223467789999999999999999998865421 247999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+. ++|.+++.... .+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 88 YELMD-TDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EeCCC-CCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 99995 69999887543 499999999999999999999999 9999999999999999999999999998765332
Q ss_pred CCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--ccccc----
Q 006178 519 SEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMSY---- 590 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~---- 590 (658)
.. ......++..|+|||.+.. ..++.++|||||||++|||++|+.||...+.. ...........+ .....
T Consensus 162 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 162 GD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred cc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 21 1112234567999998765 46899999999999999999999999654311 000011000000 00000
Q ss_pred -----------ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhccCC
Q 006178 591 -----------VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRIDT 638 (658)
Q Consensus 591 -----------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~ 638 (658)
...+......+..+..+.+++.+||+.+|++|||++|+++. +..+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 00001111112345678899999999999999999999987 6665443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=299.72 Aligned_cols=265 Identities=20% Similarity=0.205 Sum_probs=192.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~lv 438 (658)
.+.||+|+||.||+|+.. ++..||+|++..... ......+.+|+.++++++||||+++++++..... ...++|
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 86 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH---QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIV 86 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEE
Confidence 488999999999999975 578899998743221 1234567889999999999999999998765431 257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||++ ++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~e~~~-~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 87 QELME-TDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred ehhcc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 99996 4888887643 489999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCCC-cccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--cccccccC
Q 006178 519 SEKNPG-TLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMSYVVD 593 (658)
Q Consensus 519 ~~~~~~-~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ 593 (658)
...... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+.. ...........+ +....+.+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 211111 11233566899998755 56899999999999999999999999653311 111111111110 00000000
Q ss_pred Cc----------CCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhccC
Q 006178 594 PE----------LKHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRID 637 (658)
Q Consensus 594 ~~----------~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 637 (658)
.. .... .+..+.++.+++.+||+.||++|||+.|+++. ++...+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 00 0000 01234568899999999999999999999987 665554
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=288.08 Aligned_cols=251 Identities=16% Similarity=0.179 Sum_probs=189.3
Q ss_pred hhcccccCCCCeeEEEEEecCC-CeEEEEEEeeec-cccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGG-PEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~-~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+++.... ..+++|.+.... .........++.+|+.++++++||||+++++++.+.. ..++|
T Consensus 3 ~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (260)
T cd08222 3 ILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD--AFCII 80 (260)
T ss_pred eeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC--ceEEE
Confidence 3457899999999999987643 334444432211 1111223345778999999999999999999998776 67999
Q ss_pred EEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 439 FDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
|||+++++|.+++.. .....+++..++.++.|+++||+|||+. +++|+||||+||++++ +.+||+|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 2234689999999999999999999999 9999999999999975 569999999887653
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
..... .....+...|+|||...+..++.++||||||+++|+|++|..||.... .......... ...
T Consensus 157 ~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~--~~~~~~~~~~----------~~~ 222 (260)
T cd08222 157 GSCDL--ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN--FLSVVLRIVE----------GPT 222 (260)
T ss_pred CCccc--ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHc----------CCC
Confidence 32211 112233556899999988889999999999999999999999985432 2222221111 111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+...+.++.+++.+||+.+|++||++.|+++.
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 12334556778899999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=290.41 Aligned_cols=257 Identities=20% Similarity=0.190 Sum_probs=192.7
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+..+ ++.+++|.+.... ......+.+.+|+.++++++|+|++++++++.+.+ ..++||||
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e~ 79 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN--EEEGIPSTALREISLLKELKHPNIVKLLDVIHTER--KLYLVFEY 79 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEecccc--ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC--ceEEEecC
Confidence 4679999999999999874 7888888876543 12223456788999999999999999999998876 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
++ ++|.+++.... ..+++..+..++.|+++||+|||++ +|+||||+|+||++++++.+||+|||.++.......
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 97 59999998653 2589999999999999999999999 999999999999999999999999999876533221
Q ss_pred CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--------cc--c
Q 006178 522 NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--------VM--S 589 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--------~~--~ 589 (658)
.......+..|+|||.+.+. .++.++|||||||++|||++|+.||...... ...........+. .. .
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 11122335668999998776 7899999999999999999999999654311 0011111000000 00 0
Q ss_pred cccCCcCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 590 YVVDPELK-----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 590 ~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...-+... ...+.....+.+++.+||+.||++||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000000 001122567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=289.37 Aligned_cols=248 Identities=21% Similarity=0.239 Sum_probs=194.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+.. ++..+++|.+.... .......+.+.+|++++++++ ||||+++++++.+.+ ..++||
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~ 81 (280)
T cd05581 5 FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQ-LIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE--NLYFVL 81 (280)
T ss_pred EeeeecCCCceEEEEEEEcCCCCEEEEEEechHh-ccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc--eEEEEE
Confidence 4478999999999999986 67788888764322 122233467889999999998 999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++...+ .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 82 EYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 9999999999997654 599999999999999999999999 99999999999999999999999999987654322
Q ss_pred CC------------------CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh
Q 006178 520 EK------------------NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 520 ~~------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 581 (658)
.. .......++..|++||...+..++.++||||||++++++++|+.||...... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~ 234 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY--LTFQKI 234 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH--HHHHHH
Confidence 11 1111122345689999998888999999999999999999999999754321 111111
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSM----QELCT 630 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~----~evl~ 630 (658)
... ....+...++.+.+++.+||+.+|++||++ +|+++
T Consensus 235 ~~~-----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 235 LKL-----------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred Hhc-----------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 110 011222335668899999999999999999 66654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=293.46 Aligned_cols=262 Identities=15% Similarity=0.151 Sum_probs=187.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC------Cc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP------FT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~ 434 (658)
+.+.||+|+||.||+|... +++.+|+|++...... ......+.+|++++++++||||+++++++.+... ..
T Consensus 12 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 89 (311)
T cd07866 12 ILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGS 89 (311)
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--CCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCce
Confidence 3478999999999999976 5788999987654322 1122356789999999999999999998765432 14
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.++||||+.+ ++.+.+.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 90 ~~lv~~~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 90 VYMVTPYMDH-DLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred EEEEEecCCc-CHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 6999999965 7877776433 3599999999999999999999999 999999999999999999999999999876
Q ss_pred hhhcCCCCCC---------cccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhc
Q 006178 515 ILARSEKNPG---------TLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLE 583 (658)
Q Consensus 515 ~~~~~~~~~~---------~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~ 583 (658)
.......... ....+...|+|||.+.+ ..++.++|||||||++|||++|++||...... ..+.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T cd07866 165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCG 244 (311)
T ss_pred ccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 5432211110 11122455899998765 45899999999999999999999999643321 1111111000
Q ss_pred CC--c------cccccc----CCcCCCC----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 584 LP--E------VMSYVV----DPELKHF----SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 584 ~~--~------~~~~~~----~~~~~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+ . ...... ....... .......+.+++.+|++.||++|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00 0 000000 0000000 0112256889999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=288.37 Aligned_cols=245 Identities=17% Similarity=0.140 Sum_probs=196.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
++||+|+||.||-+..+ +|+.+|.|++.++... ....+....+|-.+|.+++.+.||.+--.|+..+ ..++|+..|
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiK-kr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd--~LClVLtlM 267 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIK-KRKGETMALNEKQILEKVSSPFIVSLAYAFETKD--ALCLVLTLM 267 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHH-HhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC--ceEEEEEee
Confidence 89999999999999876 5788888887655422 2233456789999999999999999988888877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
.||||.-+|...+...+++.++.-++.+|+.||++||+. +||.||+||+|||+|++|+++|+|.|+|..+..... .
T Consensus 268 NGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~-~ 343 (591)
T KOG0986|consen 268 NGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP-I 343 (591)
T ss_pred cCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCCc-c
Confidence 999999999887777899999999999999999999999 999999999999999999999999999988754322 1
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.+. .++.-|||||++.++.|+...|.||+||++|||+.|+.||....... .| +.++..+...-..++..
T Consensus 344 ~~r--vGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-k~--------eEvdrr~~~~~~ey~~k 412 (591)
T KOG0986|consen 344 RGR--VGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-KR--------EEVDRRTLEDPEEYSDK 412 (591)
T ss_pred ccc--cCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-hH--------HHHHHHHhcchhhcccc
Confidence 222 44556999999999999999999999999999999999996433211 11 00111111111234455
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQ 626 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~ 626 (658)
.+++..++....|+.||++|-...
T Consensus 413 FS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 413 FSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cCHHHHHHHHHHHccCHHHhccCC
Confidence 667788999999999999997543
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=294.73 Aligned_cols=269 Identities=18% Similarity=0.160 Sum_probs=199.0
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---CCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---~~~~~l 437 (658)
+.+.||+|+||.||+|+..+ +..+++|++..... .....+.+.+|+.+++.++|+||+++++++.... ....++
T Consensus 4 i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred eeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 45789999999999999864 78899998754332 1233467889999999999999999999987653 125799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||++ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||++.....
T Consensus 82 v~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 82 VTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred Eecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 999997 58999987544 699999999999999999999999 999999999999999999999999999887543
Q ss_pred cCCC-CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--------
Q 006178 518 RSEK-NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE-------- 586 (658)
Q Consensus 518 ~~~~-~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~-------- 586 (658)
.... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...... ...........+.
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 235 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFIT 235 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcc
Confidence 3210 111122345568999999887 7899999999999999999999999654321 1111111110000
Q ss_pred --ccccccC---C----cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhccCC
Q 006178 587 --VMSYVVD---P----ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRIDT 638 (658)
Q Consensus 587 --~~~~~~~---~----~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~ 638 (658)
.....+. . .+.......+..+.+++.+||+.+|.+||+++++++. +++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 236 SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0000000 0 0000112245678899999999999999999999985 6655543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=290.12 Aligned_cols=262 Identities=16% Similarity=0.148 Sum_probs=187.2
Q ss_pred hcccccCCCCeeEEEEEecC---CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecC--CCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES--SPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~--~~~~~ 435 (658)
+.+.||+|+||.||+++... +..+|+|++..... .....+.+.+|+++++++ +||||+++++++... .....
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 4 LIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS--KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred EEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 45789999999999999763 66888988743221 122345678899999999 699999999975432 22257
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++++||+. ++|.+++.... .+++..+..++.||+.||+|||+. +++||||||+||++++++.+||+|||+++.+
T Consensus 82 ~~~~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 82 YLYEELME-ADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEeccc-CCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 88999985 69999986543 489999999999999999999999 9999999999999999999999999998865
Q ss_pred hhcCCCCC--CcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--cccc
Q 006178 516 LARSEKNP--GTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMS 589 (658)
Q Consensus 516 ~~~~~~~~--~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~ 589 (658)
........ .....++..|+|||...+ ..++.++|||||||++|+|++|+.||...+.. ...........+ +...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 43221111 111234566899998765 46899999999999999999999998653311 111111000000 0000
Q ss_pred cccC---------------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 YVVD---------------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~---------------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+.+ ..+..........+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 00000011124568899999999999999999998754
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=290.46 Aligned_cols=254 Identities=19% Similarity=0.186 Sum_probs=187.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|... +++.+|+|++..... .....+.+.+|++++++++||||+++++++..... ..+++|||
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~lv~e~ 91 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS--TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYFVTEL 91 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC-cEEEEeeh
Confidence 389999999999999976 678899998754321 12234567899999999999999999999876432 57899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+ +++|.++++.. .+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||.+.......
T Consensus 92 ~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~-- 162 (328)
T cd07856 92 L-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQM-- 162 (328)
T ss_pred h-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCCc--
Confidence 9 56999888643 478888999999999999999999 99999999999999999999999999887532211
Q ss_pred CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhc-CCcc-cccccCC---
Q 006178 522 NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLE-LPEV-MSYVVDP--- 594 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~-~~~~-~~~~~~~--- 594 (658)
....+...|+|||.+.+ ..++.++|||||||++|||+||+.||....... ......... .++. .....+.
T Consensus 163 ---~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd07856 163 ---TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL 239 (328)
T ss_pred ---CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence 11123456899998766 568999999999999999999999996543210 000011000 0000 0000000
Q ss_pred ----cC---CCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ----EL---KHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ----~~---~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ...+ ...+..+.+++.+||+.+|++||++.+++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0011 1234678899999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=279.21 Aligned_cols=239 Identities=23% Similarity=0.217 Sum_probs=189.5
Q ss_pred ccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||+|+||.||++... +++.+++|.+..... ......+.+..|++++++++|+||+++++.+.... ..++||||+++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~~ 77 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE--KLYLVLEYAPG 77 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh-cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC--eeEEEEecCCC
Confidence 699999999999986 477888887754332 22234557889999999999999999999998777 78999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
++|.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++........ ..
T Consensus 78 ~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~ 150 (250)
T cd05123 78 GELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RT 150 (250)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cc
Confidence 99999997554 489999999999999999999998 999999999999999999999999998876533211 11
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHH
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDL 604 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (658)
....+...|++||...+...+.++|+||||+++||+++|+.||...+. ........... ...+...+
T Consensus 151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~~~-----------~~~~~~~~ 217 (250)
T cd05123 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKILKDP-----------LRFPEFLS 217 (250)
T ss_pred cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhcCC-----------CCCCCCCC
Confidence 222345568999999888899999999999999999999999965432 22222211110 11222234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHH
Q 006178 605 KVICEVVNLCVNPDITKRPSMQE 627 (658)
Q Consensus 605 ~~~~~li~~cl~~dP~~RPs~~e 627 (658)
..+.+++.+||..||++||++.+
T Consensus 218 ~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 218 PEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHHhcCCHhhCCCccc
Confidence 66789999999999999999944
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=281.55 Aligned_cols=254 Identities=19% Similarity=0.219 Sum_probs=191.4
Q ss_pred cccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccc----hhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWT----GYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.++||+|||+.||||.+-.. +.||||.- ...+.|. ....+...+|.+|.+.++||.||++|+|+.-+.. ..|-
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIH-qlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd-sFCT 545 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIH-QLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD-SFCT 545 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeee-hhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc-ccee
Confidence 37899999999999997654 55555543 3333332 2334567789999999999999999999975443 5699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~ 514 (658)
|+|||+|.+|.-||+.+. .+++.++..|+.||+.||.||... .|+|||-||||.|||+.+ .|.+||.|||++++
T Consensus 546 VLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 546 VLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 999999999999998665 499999999999999999999985 779999999999999964 47899999999999
Q ss_pred hhhcCCCC-----CCcccccCccccCCccccc----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCC
Q 006178 515 ILARSEKN-----PGTLGSQGAICILPSSLEA----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 515 ~~~~~~~~-----~~~~~~~~~~~~aPE~~~~----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 585 (658)
+.+..... ....+.++|+|.+||.+.- .+++.|+||||.|||+|..+.|+.||..+..... .++..
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd-----ILqeN 697 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD-----ILQEN 697 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH-----HHhhh
Confidence 87554332 1234667888999998754 3578999999999999999999999965432111 11110
Q ss_pred cccccccCCcCCCCC--HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 586 EVMSYVVDPELKHFS--YDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+ +...--.+| +....+..++|++||++.-++|....++..
T Consensus 698 TI----lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 698 TI----LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ch----hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11 111101111 223456779999999999999998877764
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=292.25 Aligned_cols=252 Identities=17% Similarity=0.202 Sum_probs=187.2
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~l 437 (658)
.+.||+|+||.||+|... ++..||+|++.... ......+.+.+|++++++++||||+++++++..... ...++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 97 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYL 97 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEE
Confidence 478999999999999865 67889999874322 122334568899999999999999999999875432 13589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 98 v~e~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 98 VMPFM-GTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred EEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 99999 67999888643 489999999999999999999999 999999999999999999999999999875432
Q ss_pred cCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc----c-----
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE----V----- 587 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~----~----- 587 (658)
.. .....+..|++||.+.+ ..++.++|||||||++|++++|+.||...... ........... .
T Consensus 171 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07880 171 EM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL--DQLMEIMKVTGTPSKEFVQKL 243 (343)
T ss_pred Cc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHHHHhh
Confidence 11 11123456899999876 45889999999999999999999999754321 11111100000 0
Q ss_pred -----------cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 588 -----------MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 588 -----------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
........+..........+.+++.+|++.||++|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 244 QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred cchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000111223456889999999999999999999994
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=292.70 Aligned_cols=265 Identities=17% Similarity=0.155 Sum_probs=191.0
Q ss_pred HHHHHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEec
Q 006178 353 QELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (658)
Q Consensus 353 ~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 429 (658)
.++...++.|. +.||+|+||.||+|... ++..||+|++..... .....+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34445555564 78999999999999864 678899998754321 12234567889999999999999999998864
Q ss_pred CCC----CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCce
Q 006178 430 SSP----FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505 (658)
Q Consensus 430 ~~~----~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 505 (658)
... ...+++++++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEE
Confidence 321 1467888887 77999887643 489999999999999999999999 999999999999999999999
Q ss_pred eccccchhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhh
Q 006178 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYL 582 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~ 582 (658)
|+|||+++...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .........
T Consensus 161 l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 161 ILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred Eecccccccccccc-----cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99999987542211 11223456899998866 56889999999999999999999999643321 111101000
Q ss_pred cC-Cccccccc---------------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 583 EL-PEVMSYVV---------------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 583 ~~-~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. +.....+. ..............+.+++.+|++.||.+||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00 00000000 000000001124567899999999999999999999876
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=295.44 Aligned_cols=257 Identities=18% Similarity=0.202 Sum_probs=185.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--------
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP-------- 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------- 432 (658)
+.+.||.|+||.||+|... ++..||+|++..+.. ...+.+.+|++++++++||||+++++++.....
T Consensus 9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 3488999999999999976 577899998755432 234568899999999999999999987765431
Q ss_pred ----CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceec
Q 006178 433 ----FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLV 507 (658)
Q Consensus 433 ----~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~ 507 (658)
...++||||++ ++|.+++... .+++..+..++.||+.||+|||+. +++||||||+||+++. ++.+||+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEEC
Confidence 14689999996 5999888643 489999999999999999999999 9999999999999984 5678999
Q ss_pred cccchhhhhhcCCCC-CCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcC-
Q 006178 508 DFDSWKTILARSEKN-PGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL- 584 (658)
Q Consensus 508 DFGla~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~- 584 (658)
|||.++.+....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||...... .. .......
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~-~~~~~~~~ 235 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL-EQ-MQLILESV 235 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HH-HHHHHHhc
Confidence 999987643211111 1111233556899998754 56889999999999999999999999644321 11 0000000
Q ss_pred Cc-----------ccccccC--CcCCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 585 PE-----------VMSYVVD--PELKH-----FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 585 ~~-----------~~~~~~~--~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+. ....... ..... .......++.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00 0000000 00000 011234568899999999999999999999853
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=278.35 Aligned_cols=220 Identities=14% Similarity=0.118 Sum_probs=173.0
Q ss_pred CCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCCCCh
Q 006178 369 SPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447 (658)
Q Consensus 369 G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL 447 (658)
|.||.||++++. +++.+|+|++.... .+.+|...+....||||+++++++.+.+ ..++||||+++|+|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSED--SVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecCC--eEEEEEecCCCCCH
Confidence 899999999986 56789999874332 2334555555667999999999998877 78999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCccc
Q 006178 448 YEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLG 527 (658)
Q Consensus 448 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 527 (658)
.+++.... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||.+........ ..
T Consensus 73 ~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~-----~~ 142 (237)
T cd05576 73 WSHISKFL--NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD-----GE 142 (237)
T ss_pred HHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccc-----cC
Confidence 99987543 489999999999999999999999 999999999999999999999999998765432111 11
Q ss_pred ccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHH
Q 006178 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVI 607 (658)
Q Consensus 528 ~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (658)
..+..|+|||......++.++||||+|+++|||++|+.|+....... ..... ...+...+..+
T Consensus 143 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--------------~~~~~---~~~~~~~~~~~ 205 (237)
T cd05576 143 AVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--------------NTHTT---LNIPEWVSEEA 205 (237)
T ss_pred CcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--------------ccccc---cCCcccCCHHH
Confidence 22455999999988889999999999999999999998874321110 00000 01222344668
Q ss_pred HHHHHHccCCCCCCCCCHH
Q 006178 608 CEVVNLCVNPDITKRPSMQ 626 (658)
Q Consensus 608 ~~li~~cl~~dP~~RPs~~ 626 (658)
.+++.+|++.||++||++.
T Consensus 206 ~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHccCCHHHhcCCC
Confidence 8999999999999999973
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=294.74 Aligned_cols=253 Identities=19% Similarity=0.214 Sum_probs=187.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~l 437 (658)
.+.||+|+||.||+|+.. ++..+|+|++..... .....+.+.+|+.++++++||||+++++++...+. ...++
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 97 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ--SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYL 97 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccc--hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEE
Confidence 478999999999999986 467888887743221 12233567789999999999999999998765542 13799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 98 v~e~~-~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 98 VTHLM-GADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred EEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 99999 66999998743 589999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhc---CCc--ccccc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE---LPE--VMSYV 591 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~---~~~--~~~~~ 591 (658)
. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ........ .+. ....+
T Consensus 171 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 171 E-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred c-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCCHHHHhhc
Confidence 2 111223456899999865 36789999999999999999999999654321 11111110 000 00000
Q ss_pred --------cC-------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 --------VD-------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 --------~~-------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. +.........+..+.+++.+||+.||++|||+.||++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00 00000011125678899999999999999999999864
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=275.74 Aligned_cols=253 Identities=17% Similarity=0.226 Sum_probs=201.9
Q ss_pred ccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
..+-+|.||.||+|.+. +.+.|.||.++... ..-....+..|.-.+..+.|||+..+.+++.+... ..+.
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A---S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-~P~V 365 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA---SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-TPFV 365 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc---cHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC-cceE
Confidence 67889999999999654 34556666653221 22334568889999999999999999999876543 5789
Q ss_pred EEEecCCCChhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccc
Q 006178 438 VFDYASNGTLYEHLHY------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 511 (658)
+|.++.-|+|..++.. .....++-.+...++.|++.|++|||++ ++||.||..+|.+||+..++||+|=.+
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaL 442 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSAL 442 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchh
Confidence 9999999999999972 1223577888999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
++.+-.......+.....+..||+||.+....|+.++|||||||+||||+| |+.||.+-+.... ..++
T Consensus 443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm---~~yl-------- 511 (563)
T KOG1024|consen 443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM---EHYL-------- 511 (563)
T ss_pred ccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH---HHHH--------
Confidence 988765544444555556778999999999999999999999999999999 8999854332111 1111
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.|...-..|-++++++..++..||+.+|++||+++|++.-|.+.
T Consensus 512 -kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 512 -KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred -hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 12222234567889999999999999999999999999988764
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=269.75 Aligned_cols=239 Identities=20% Similarity=0.191 Sum_probs=190.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+|.++||+|.||.|-.++-+ .++.+|+|.+++.. .........-..|-++|+..+||.+..+.-.|...+ +.|+||
T Consensus 171 dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKev-iiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d--rlCFVM 247 (516)
T KOG0690|consen 171 DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEV-IIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD--RLCFVM 247 (516)
T ss_pred hHHHHhcCCccceEEEEeecccCceeehhhhhhhh-eeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc--eEEEEE
Confidence 35689999999999999976 56777877764332 222333445678999999999999999988887777 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||..||.|+-+|.+.+ .+++....-+...|+.||.|||++ +||.||+|.+|.|+|.||++||+|||+++.-....
T Consensus 248 eyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 248 EYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccccc
Confidence 9999999998887543 589999999999999999999999 99999999999999999999999999998633222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .....++++.|.|||++....|+.+.|.|.+|||||||+.|+.||+..+. .+.+.+ .-.++ .
T Consensus 323 ~--t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI-------------l~ed~-k 386 (516)
T KOG0690|consen 323 D--TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI-------------LMEDL-K 386 (516)
T ss_pred c--eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH-------------Hhhhc-c
Confidence 2 22234467889999999999999999999999999999999999975432 121111 11111 2
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRP 623 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RP 623 (658)
+|....++...|+...|..||.+|-
T Consensus 387 FPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 387 FPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred CCccCCHHHHHHHHHHhhcChHhhc
Confidence 4455556788999999999999994
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=291.65 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=187.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+|...+|.|+|+.|-++.+. +++..+||.+..... +..+|+.++.+. +||||+++.+.+.+.. +.|+|
T Consensus 325 ~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~--------~~~~e~~~~~~~~~h~niv~~~~v~~~~~--~~~~v 394 (612)
T KOG0603|consen 325 EFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD--------DNQDEIPISLLVRDHPNIVKSHDVYEDGK--EIYLV 394 (612)
T ss_pred ccccccCCCCccceeeeeccccccchhheecccccc--------ccccccchhhhhcCCCcceeecceecCCc--eeeee
Confidence 44567999999999999876 567888888754421 234677777776 8999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee-cCCCCceeccccchhhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL-TEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl-~~~~~~kl~DFGla~~~~~ 517 (658)
||++.+|-+.+.+...+. .. .++..|+.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++....
T Consensus 395 ~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred ehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999999988888775543 23 77888999999999999999 99999999999999 5889999999999987644
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. ......+..|.|||+.....|++++|+||||++||+|++|+.||....... +. ......+
T Consensus 469 ~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-ei-~~~i~~~------------ 529 (612)
T KOG0603|consen 469 S-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-EI-HTRIQMP------------ 529 (612)
T ss_pred h-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH-HH-HHhhcCC------------
Confidence 3 111123456889999999999999999999999999999999997655441 11 1111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+....++..++|+..||+.||.+||+|.++...
T Consensus 530 ~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 530 KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1224455778899999999999999999998764
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=266.74 Aligned_cols=265 Identities=21% Similarity=0.239 Sum_probs=192.6
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC------CCceE
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~~~ 436 (658)
.+||+|.||.||+|+.++ |+.||+|++....+. ........+|+++|..++|+|++.++..|.... ....|
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK--eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccc--cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence 579999999999999874 567788876542211 111234679999999999999999999885422 12479
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||++|+. +|..++... ...++..++.+++.++..||.|+|+. .|+|||+||+|+||+.++.+||+|||+++.+.
T Consensus 101 lVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 101 LVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred eeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 99999977 999988643 34699999999999999999999999 99999999999999999999999999998775
Q ss_pred hcCCCCC--CcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhc--CCccccc
Q 006178 517 ARSEKNP--GTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLE--LPEVMSY 590 (658)
Q Consensus 517 ~~~~~~~--~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~--~~~~~~~ 590 (658)
....... .+....+.+|.+||.+.+ ..|+++.|||..|||+.||.||.+-+.++.... ...+..... .++....
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 4332221 222334677889999887 569999999999999999999999887554221 111111100 0011110
Q ss_pred ---------------------ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 591 ---------------------VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 591 ---------------------~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+...++.+- -.++..+|+..++..||.+|+++++++..---..+
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~--kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd 321 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYV--KDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD 321 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhccccc--CChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence 0111111110 12367799999999999999999999876543333
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=241.85 Aligned_cols=256 Identities=15% Similarity=0.171 Sum_probs=188.6
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
++||+|.||+||||+..+ ++.||.|++...+.. +.......+|+-+++.++|.|||+++++...+. ...+|+|||
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddd--egvpssalreicllkelkhknivrl~dvlhsdk--kltlvfe~c 83 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCC--CCCcHHHHHHHHHHHHhhhcceeehhhhhccCc--eeEEeHHHh
Confidence 679999999999999765 567888888654432 223456789999999999999999999988777 779999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
.. +|..+...-.+ .++.+....++.|+++||.|+|++ ++.|||+||.|.|++.+|+.|++|||+|+.+.-...
T Consensus 84 dq-dlkkyfdslng-~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvr-- 156 (292)
T KOG0662|consen 84 DQ-DLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-- 156 (292)
T ss_pred hH-HHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceE--
Confidence 65 88888764333 589999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHh-CCCCCCCCCC--cHHHHHHHhhcCC--ccccccc-CCc
Q 006178 523 PGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIIS-GRPPCCKDKG--NLVDWAKDYLELP--EVMSYVV-DPE 595 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~--~~~~~~~~~~~~~--~~~~~~~-~~~ 595 (658)
.......+.+|.+|.++.+.+ |++..|+||.|||+.|+.. |++-|.+.+. .+.... ..+..+ +....+. -+.
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif-~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF-RLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHH-HHhCCCccccCCccccCCC
Confidence 122233466788899988754 8999999999999999997 5655655432 111111 111111 1111100 011
Q ss_pred CCCC---C---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHF---S---------YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~---~---------~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+.+ + +.....-.+++.+.+.-+|.+|.++++.++.
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1111 1 2222345688899999999999999987763
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=284.13 Aligned_cols=245 Identities=20% Similarity=0.244 Sum_probs=196.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
++||+|.||+||-|+++ +|+.||||.+.+.... ...+.++++|+.||++++||.||.+.-.|+..+ ..++|||-+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp--~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e--rvFVVMEKl 645 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP--TKQESQLRNEVAILQNLHHPGIVNLECMFETPE--RVFVVMEKL 645 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCC--CchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc--eEEEEehhh
Confidence 89999999999999986 6899999998654433 223467999999999999999999999999888 889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchhhhhhcC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWKTILARS 519 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~~ 519 (658)
+||..+.|-...+..+++....-+..||+.||.|||.+ +|+|+||||+|||+.+. -.+||||||+|+.+....
T Consensus 646 -~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 646 -HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred -cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 56877777666666799999999999999999999999 99999999999999743 379999999999986443
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. .....+++.|.|||++..+.|...-|+||.|||+|--++|..||..+++ +.+.++. ..-+..+.-
T Consensus 722 F---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-IndQIQN-------AaFMyPp~P--- 787 (888)
T KOG4236|consen 722 F---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-INDQIQN-------AAFMYPPNP--- 787 (888)
T ss_pred h---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-hhHHhhc-------cccccCCCc---
Confidence 2 2334567889999999999999999999999999999999999975543 2211111 011111111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
-.+.....++||...|+..-.+|.|.++.+.
T Consensus 788 W~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 788 WSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 1244556789999999999999998876653
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=294.76 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=200.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC---CCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS---PFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~---~~~~ 435 (658)
+|.+.||.|.+|.||+++.. +++..|||.+..... ..+++..|.++++.. +|||++.+||++...+ +.++
T Consensus 22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred EEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 45589999999999999976 566677776644332 245677899999988 7999999999986422 3379
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
|||||||.+||.-|+++.-....+.|..+..|++.++.|+.+||.+ .++|||||-.|||++.++.+|++|||.+..+
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 9999999999999999866566799999999999999999999999 9999999999999999999999999998876
Q ss_pred hhcCCCCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
.... ......++++.|||||++.. ..|+.++|+||+|++..||--|.+|+.+...- +..+..+ .
T Consensus 174 dsT~--grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm-----raLF~Ip----R 242 (953)
T KOG0587|consen 174 DSTV--GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLIP----R 242 (953)
T ss_pred eccc--ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----hhhccCC----C
Confidence 4332 23344567889999999864 34778999999999999999999998643221 1111111 1
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.-.|.++ .+....+++.++|..|+..|.++||++.++++.
T Consensus 243 NPPPkLk-rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 243 NPPPKLK-RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCCcccc-chhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1112222 367788999999999999999999999988754
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-33 Score=272.87 Aligned_cols=265 Identities=12% Similarity=0.155 Sum_probs=197.1
Q ss_pred ccHHHHHHHHhhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-C-C----Cccc
Q 006178 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H-E----NTGK 422 (658)
Q Consensus 350 ~~~~~l~~~~~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H-~----nIv~ 422 (658)
|...|.....+..-..+|+|.||.|-++.+.. +..||+|.+..-. ...+..+-|+++|.++. + | -+|+
T Consensus 81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-----kYreAa~iEi~vLqki~~~DP~g~~rcv~ 155 (415)
T KOG0671|consen 81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-----KYREAALIEIEVLQKINESDPNGKFRCVQ 155 (415)
T ss_pred EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-----HHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 33444544555555889999999999999764 5788888774332 23456678999999993 2 2 3688
Q ss_pred eeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--
Q 006178 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-- 500 (658)
Q Consensus 423 l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-- 500 (658)
+.+||...+ +.+||+|.+ |-|+++++..+...+++...+..++.|++++++|||+. +++|-||||+|||+.+
T Consensus 156 m~~wFdyrg--hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 156 MRDWFDYRG--HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSE 229 (415)
T ss_pred eehhhhccC--ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccc
Confidence 888898888 889999999 66999999988878899999999999999999999999 9999999999999842
Q ss_pred ------------------CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh
Q 006178 501 ------------------DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562 (658)
Q Consensus 501 ------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt 562 (658)
+..+||+|||.|..-.. .......+..|+|||++.+-.++.++||||+||||+|++|
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeec
Confidence 23589999998865321 1133344567999999999999999999999999999999
Q ss_pred CCCCCCCCCC--cHHHHHHHhh-cCCcccc--------------------------cccCCcC-----CCCCHHHHHHHH
Q 006178 563 GRPPCCKDKG--NLVDWAKDYL-ELPEVMS--------------------------YVVDPEL-----KHFSYDDLKVIC 608 (658)
Q Consensus 563 G~~p~~~~~~--~~~~~~~~~~-~~~~~~~--------------------------~~~~~~~-----~~~~~~~~~~~~ 608 (658)
|..-|...+. .+. .+.... +.+..+. .+.++-. ......+..++.
T Consensus 305 G~~LFqtHen~EHLa-MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 305 GETLFQTHENLEHLA-MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred cceecccCCcHHHHH-HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 9999976552 221 111111 1111000 0000000 011234556799
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 006178 609 EVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 609 ~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+|+.+||..||.+|+|+.|+++.
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHccCccccccHHHHhcC
Confidence 99999999999999999999864
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-32 Score=304.16 Aligned_cols=144 Identities=21% Similarity=0.173 Sum_probs=126.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|.+. +++.||+|.+..... ........+.+|+.++..++||||+++++++.... ..++|||
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lVmE 84 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN--NVYLVME 84 (669)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC--EEEEEEe
Confidence 3488999999999999987 578899998754332 22334467889999999999999999999998777 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
|+.+++|.+++.... .+++..++.|+.||+.||+|||.+ +|+||||||+|||++.++.+||+|||+++
T Consensus 85 y~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 85 YLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999997543 488999999999999999999999 99999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.1e-33 Score=301.23 Aligned_cols=257 Identities=21% Similarity=0.213 Sum_probs=198.0
Q ss_pred HHHHHHhhhc--ccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC
Q 006178 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (658)
Q Consensus 354 ~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 430 (658)
++.....+|. ++||+|+||.|..++++.+ +.+|.|++. +...........|+.|-.+|..-+.+=|+.++-.|.+.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~ln-K~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILN-KWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhh-HHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 3443444554 8999999999999999864 555666553 32222223345799999999999999999999999988
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 431 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
. +.|+|||||+||||-.++.+.. .+++..+.-++..|+-||+-||+. |+|||||||+|||||..|++||+|||
T Consensus 148 ~--~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 148 R--YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred c--ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 8 8999999999999999998665 599999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCC
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 585 (658)
.+-.+.... ........+++-|.+||++.. +.|++.+|.||+||++|||+.|..||+.+ .+++-........
T Consensus 221 sClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad--slveTY~KIm~hk 297 (1317)
T KOG0612|consen 221 SCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD--SLVETYGKIMNHK 297 (1317)
T ss_pred hHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH--HHHHHHHHHhchh
Confidence 888765433 233445567888999999862 67999999999999999999999999754 2332222222221
Q ss_pred cccccccCCcCCCCC--HHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 006178 586 EVMSYVVDPELKHFS--YDDLKVICEVVNLCVNPDITKRPS---MQELCTM 631 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~RPs---~~evl~~ 631 (658)
+.+ .+| .+.+++..+||.+.+. +|+.|-. ++++-.+
T Consensus 298 ~~l---------~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 298 ESL---------SFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hhc---------CCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 111 122 2355778889988775 6888877 7777654
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-33 Score=271.78 Aligned_cols=247 Identities=18% Similarity=0.145 Sum_probs=191.8
Q ss_pred HHHHHhhhcccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 355 LEVACEDFSNIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 355 l~~~~~~f~~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
+.....+|..+||+|+||.|..|..+++ ..+|||.+++..- ......+--..|-++|.-- +-|.+++++.+|...+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVi-iQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD- 423 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD- 423 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhcccee-eecCcccceehhhhheecCCCCchHHHHHHHhhhhh-
Confidence 3344457789999999999999998764 4567776643322 2222233445677777766 6789999999998888
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
..|.||||+.||+|--.+.+-++ +.+..+.-+|.+||-||-|||++ +|+.||||.+|||+|.+|.+||+|||++
T Consensus 424 -RLyFVMEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmc 497 (683)
T KOG0696|consen 424 -RLYFVMEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 497 (683)
T ss_pred -heeeEEEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccc
Confidence 78999999999999988876554 78888999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
+.-.-. ........+++-|+|||++..++|+..+|.|||||+||||+.|++||++++++. ..+...+.
T Consensus 498 KEni~~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e--lF~aI~eh-------- 565 (683)
T KOG0696|consen 498 KENIFD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--LFQAIMEH-------- 565 (683)
T ss_pred cccccC--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHc--------
Confidence 853222 222233445678999999999999999999999999999999999998765431 11111111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs 624 (658)
-..+|...+.+..++....+...|.+|-.
T Consensus 566 ---nvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 566 ---NVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ---cCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 11345556677888999999999999953
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=262.67 Aligned_cols=239 Identities=21% Similarity=0.239 Sum_probs=187.3
Q ss_pred CCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCCCChh
Q 006178 370 PDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448 (658)
Q Consensus 370 ~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~ 448 (658)
+||.||+|+..+ +..+++|.+....... ..+.+.+|++.+++++|+||+++++++.... ..+++|||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK---KRERILREISILKKLKHPNIVRLYDVFEDED--KLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc---HHHHHHHHHHHHHhCCCCcHHHHHhheeeCC--EEEEEEeCCCCCCHH
Confidence 589999999874 7889999875443221 1467999999999999999999999998876 789999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccc
Q 006178 449 EHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGS 528 (658)
Q Consensus 449 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 528 (658)
+++..... +++..+..++.+++++++|||+. +++|+||+|+||++++++.++|+|||.+....... ......
T Consensus 76 ~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~ 147 (244)
T smart00220 76 DLLKKRGR--LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFV 147 (244)
T ss_pred HHHHhccC--CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---cccccc
Confidence 99875443 89999999999999999999999 99999999999999999999999999987654321 111223
Q ss_pred cCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHH
Q 006178 529 QGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVIC 608 (658)
Q Consensus 529 ~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (658)
+...|++||......++.++||||||+++|+|++|..||..... ........... .... .......+..+.
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~ 218 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-LLELFKKIGKP-KPPF-------PPPEWKISPEAK 218 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHhcc-CCCC-------ccccccCCHHHH
Confidence 34568999999888899999999999999999999999865221 11111111111 0000 000000346788
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 006178 609 EVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 609 ~li~~cl~~dP~~RPs~~evl~ 630 (658)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 9999999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-31 Score=282.74 Aligned_cols=255 Identities=14% Similarity=0.146 Sum_probs=174.9
Q ss_pred cccccCCCCeeEEEEEe-----------------cCCCeEEEEEEeeeccccc----------hhhHHHHHHHHHHHHhc
Q 006178 363 SNIIGSSPDSLVYKGTM-----------------KGGPEIAVISLCIKEEHWT----------GYLELYFQREVADLARI 415 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~-----------------~~~~~vavk~~~~~~~~~~----------~~~~~~~~~E~~~l~~l 415 (658)
.++||+|+||.||+|.. .+++.||||++........ ....+....|+.++.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 38999999999999964 2356799999854321100 00112344577778888
Q ss_pred cCCCc-----cceeeEEecCC------CCceEEEEEecCCCChhhhhccCC----------------------CCCCCHH
Q 006178 416 NHENT-----GKLLGYCRESS------PFTRMLVFDYASNGTLYEHLHYGE----------------------RCQVSWT 462 (658)
Q Consensus 416 ~H~nI-----v~l~~~~~~~~------~~~~~lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~ 462 (658)
+|.++ ++++++|.... ....++||||+++|+|.++++... ...+++.
T Consensus 230 ~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~ 309 (507)
T PLN03224 230 KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDIN 309 (507)
T ss_pred hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHH
Confidence 66654 67888875421 125799999999999999986421 1134678
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC
Q 006178 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR 542 (658)
Q Consensus 463 ~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~ 542 (658)
.+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ......+..++.|+|||.+...
T Consensus 310 ~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~aPE~l~~~ 385 (507)
T PLN03224 310 VIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSPPEELVMP 385 (507)
T ss_pred HHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeChhhhcCC
Confidence 8999999999999999999 99999999999999999999999999987643221 1222234446789999987543
Q ss_pred C--------------------C--CccccchhhHHHHHHHHhCCC-CCCCCC----------CcHHHHHHHhhcCCcccc
Q 006178 543 H--------------------L--DVQGNIYAFGVLLLEIISGRP-PCCKDK----------GNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 543 ~--------------------~--~~ksDVwS~Gvvl~elltG~~-p~~~~~----------~~~~~~~~~~~~~~~~~~ 589 (658)
. + ..+.||||+||++|||++|.. |+.... .+...|... ...
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~--~~~---- 459 (507)
T PLN03224 386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY--KGQ---- 459 (507)
T ss_pred CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh--ccc----
Confidence 2 1 134799999999999999975 664211 111112110 000
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDI---TKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP---~~RPs~~evl~~ 631 (658)
..... ..........+++.+++..+| .+|+|++|++++
T Consensus 460 ---~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 460 ---KYDFS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ---CCCcc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 00000 112234667899999999766 689999999864
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=292.94 Aligned_cols=253 Identities=14% Similarity=0.124 Sum_probs=159.8
Q ss_pred hcccccCCCCeeEEEEEecC-----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE------ecC
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC------RES 430 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~------~~~ 430 (658)
+.+.||+|+||.||+|++.+ +..+|+|++..... .+....| .+++..+.+++.+...+ ...
T Consensus 136 l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 136 LGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred EeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 34899999999999999864 57899998642211 1111111 12222233333332221 222
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCC------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCC
Q 006178 431 SPFTRMLVFDYASNGTLYEHLHYGERC------------------QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (658)
Q Consensus 431 ~~~~~~lv~E~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlk 492 (658)
. ..++||||+++++|.+++...... ......+..++.|++.||+|||++ +|+|||||
T Consensus 208 ~--~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 208 D--EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred C--ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 3 679999999999999998743210 012334668999999999999999 99999999
Q ss_pred CcceeecC-CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC----------------------CCCcccc
Q 006178 493 SSAVYLTE-DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR----------------------HLDVQGN 549 (658)
Q Consensus 493 p~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~----------------------~~~~ksD 549 (658)
|+|||+++ ++.+||+|||+|+.+...... ......+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999986 579999999999865322211 11222345679999965322 2445679
Q ss_pred chhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc---ccccCCc----CCC-C--CHHHHHHHHHHHHHccCCCC
Q 006178 550 IYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM---SYVVDPE----LKH-F--SYDDLKVICEVVNLCVNPDI 619 (658)
Q Consensus 550 VwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~-~--~~~~~~~~~~li~~cl~~dP 619 (658)
||||||++|||+++..|+... ...+........... .....+. ... + .........+|+.+||+.||
T Consensus 362 VwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 999999999999987765321 111111111100000 0001110 000 0 00112235589999999999
Q ss_pred CCCCCHHHHHHH
Q 006178 620 TKRPSMQELCTM 631 (658)
Q Consensus 620 ~~RPs~~evl~~ 631 (658)
++|||+.|++++
T Consensus 439 ~kR~ta~e~L~H 450 (566)
T PLN03225 439 RQRISAKAALAH 450 (566)
T ss_pred ccCCCHHHHhCC
Confidence 999999999985
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=239.27 Aligned_cols=198 Identities=14% Similarity=0.188 Sum_probs=160.8
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
..||+|+||.|-+-++. +|...|+|++...-. .+.+++..+|+.+..+. ..|.+|.+||...... ..++.||.
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn---~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg--dvwIcME~ 126 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN---SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG--DVWICMEL 126 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcC---hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc--cEEEeHHH
Confidence 56999999999888875 788999999864432 34567788999987776 8999999999887776 78999999
Q ss_pred cCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|.- ||..+-++ ..+..+++.-.-+|+.-+.+||.|||++. .++|||+||+|||++.+|++|+||||++..+.+..
T Consensus 127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 954 88766542 12335899999999999999999999985 89999999999999999999999999987764332
Q ss_pred CCCCCcccccCccccCCccccc----CCCCccccchhhHHHHHHHHhCCCCCCCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEA----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG 572 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~ 572 (658)
. .+...+-..|||||.+.. ..|+.|+||||+|+++.||.+++.||+....
T Consensus 204 A---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 204 A---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred H---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 1 122334456999998753 4699999999999999999999999975443
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-32 Score=287.51 Aligned_cols=241 Identities=18% Similarity=0.245 Sum_probs=182.2
Q ss_pred ccccCCCCe-eEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDS-LVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g-~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+++|.|+.| .||+|.+. ++.||||++.... .+...+|+..|+.- +|||||++|+.-.++. ..||..|.
T Consensus 515 eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~-------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--F~YIalEL 584 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE-GREVAVKRLLEEF-------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQ--FLYIALEL 584 (903)
T ss_pred HHcccCCCCcEEEEEeeC-CceehHHHHhhHh-------HHHHHHHHHHHHhccCCCceEEEEeeccCCc--eEEEEehH
Confidence 678999988 57999995 5899999985432 23467999999998 7999999998777666 89999999
Q ss_pred cCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---C--CCceeccccchhh
Q 006178 442 ASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---D--FSPKLVDFDSWKT 514 (658)
Q Consensus 442 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~--~~~kl~DFGla~~ 514 (658)
|.. +|.+++.... .....-.....+..|++.||++||+. +||||||||.||||+. + .+++|+|||+++.
T Consensus 585 C~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 CAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred hhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 965 9999998641 11111134567899999999999998 9999999999999986 3 4799999999999
Q ss_pred hhhcCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhC-CCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 515 ILARSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISG-RPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 515 ~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
+........ ...+.++..|+|||.+....-+.++||||+|||+|+.+|| +.||.+.-........ ......
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~----~~~~L~--- 733 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT----GNYTLV--- 733 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc----Ccccee---
Confidence 865433222 2334556779999999998888999999999999999996 9999643222111111 111111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+...+. + +..+||.+|++++|..||++.+|+.
T Consensus 734 --~L~~~~d-~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 --HLEPLPD-C--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --eeccCch-H--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1111111 1 6789999999999999999999984
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-31 Score=265.01 Aligned_cols=239 Identities=16% Similarity=0.123 Sum_probs=191.9
Q ss_pred ccccCCCCeeEEEEEecCCC-eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~-~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..||-|+||.|=.++..... .+|.|.++++. ..+...++....|-++|..++.|.||++|-.|.+.. ++|++||-|
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~h-IVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k--yvYmLmEaC 502 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKKH-IVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK--YVYMLMEAC 502 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHhh-ccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch--hhhhhHHhh
Confidence 46999999999999876544 36776664443 223334556889999999999999999999999888 889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
-||.|...+++++. ++..+..-++..+.+|++|||++ +||.|||||+|.++|.+|-+||.|||+|+.+.....
T Consensus 503 lGGElWTiLrdRg~--Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K-- 575 (732)
T KOG0614|consen 503 LGGELWTILRDRGS--FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK-- 575 (732)
T ss_pred cCchhhhhhhhcCC--cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCCc--
Confidence 99999999987664 88899999999999999999999 999999999999999999999999999998754322
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.....+++.|.|||++.++..+.++|.||+|+++|||+||++||...+.-.. ....+.. ++ ..++|..
T Consensus 576 -TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt--Yn~ILkG---id------~i~~Pr~ 643 (732)
T KOG0614|consen 576 -TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT--YNLILKG---ID------KIEFPRR 643 (732)
T ss_pred -eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH--HHHHHhh---hh------hhhcccc
Confidence 2233467889999999999999999999999999999999999976442110 0111111 00 1134555
Q ss_pred HHHHHHHHHHHccCCCCCCCCC
Q 006178 603 DLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs 624 (658)
......+++++....+|.+|-.
T Consensus 644 I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 644 ITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred cchhHHHHHHHHHhcCcHhhhc
Confidence 5677789999999999999965
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-30 Score=232.22 Aligned_cols=251 Identities=16% Similarity=0.191 Sum_probs=187.1
Q ss_pred cccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+++|+|.|+.||.|.. .+...+++|.++... .+.+.+|+.||..+. ||||+++++...++......+|+|
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred HHHHcCccHhhHhcccccCCCceEEEeeechHH-------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 47899999999999985 456677888774332 356889999999995 999999999998877667789999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~~ 519 (658)
|+.+.+...+.. .++..++..++.+++.||.|+|+. ||+|||+||.|+++|.. -..+|+|+|+|..+....
T Consensus 116 ~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 116 YVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred hhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence 999877766543 477888999999999999999999 99999999999999965 479999999999875544
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh--h--------------
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--L-------------- 582 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~-------------- 582 (658)
+... ...+..+.-||.+-. ..|+..-|+|||||++.+|+..+.||....++..+.++.. +
T Consensus 188 eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 188 EYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred eeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 3322 122333455998865 5688999999999999999999999975554433332211 0
Q ss_pred cCCcccccccCCc----CCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 583 ELPEVMSYVVDPE----LKHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 583 ~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.....++... +..+ ..-..++..+++.+.+..|-++|+|+.|.+..
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0011111111110 0001 01123678899999999999999999998754
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=242.04 Aligned_cols=241 Identities=20% Similarity=0.204 Sum_probs=184.0
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
++||+|+|++|..+++..+..+.+.|+.+++...+....+-.+.|-.+..+. +||.+|.++.+|.... ..++|.||+
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes--rlffvieyv 333 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES--RLFFVIEYV 333 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc--eEEEEEEEe
Confidence 8999999999999998866554444443444333333344567788888777 7999999999998887 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
++|+|--++.+.+ .++++.+.-+...|+-||.|||++ |||.||||.+|+|+|..|.+||.|+|+++.-.......
T Consensus 334 ~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~gd~t 408 (593)
T KOG0695|consen 334 NGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTT 408 (593)
T ss_pred cCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCCCccc
Confidence 9999987776554 499999999999999999999999 99999999999999999999999999998643332222
Q ss_pred CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC-----CcHHHHH-HHhhcCCcccccccCCcC
Q 006178 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK-----GNLVDWA-KDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~ 596 (658)
....+++-|.|||.+.+..|....|.|++||+|+||+.|+.||+.-+ .+-..+. +..++. .+
T Consensus 409 --stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek----------qi 476 (593)
T KOG0695|consen 409 --STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK----------QI 476 (593)
T ss_pred --ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh----------cc
Confidence 23345677999999999999999999999999999999999996321 1111111 111111 11
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs 624 (658)
..|...+.....+++.-+++||.+|..
T Consensus 477 -riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 477 -RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred -cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 123333344567888999999999853
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-31 Score=243.29 Aligned_cols=261 Identities=19% Similarity=0.175 Sum_probs=191.3
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---ceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~~~lv~ 439 (658)
+.||-|+||.||.++++ +|+.|+.||+.... .+-..-+++.+|+++|..++|.|++..++...-.... +.|+++
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf--q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF--QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHH--HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 67999999999999975 79999999985432 2233456788999999999999999999887654332 568899
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|.|.. +|...|-.- ..++...++-+..||++||+|||+. +|.||||||.|.|++.+...||||||+|+....+.
T Consensus 137 ELmQS-DLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 137 ELMQS-DLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHh-hhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchhh
Confidence 99954 898888643 3589999999999999999999999 99999999999999999999999999998754332
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCC----------cc
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELP----------EV 587 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~----------~~ 587 (658)
... .+....+-.|+|||.+.+ ..|+.+.||||.|||+.|++-.+.-|...+. ...+.+...+..+ ..
T Consensus 211 ~~h-MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 211 RLN-MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhh-hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 222 233334566899999987 4699999999999999999998887754321 1111222211111 00
Q ss_pred cccccC-----CcCCC---C--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 588 MSYVVD-----PELKH---F--SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 588 ~~~~~~-----~~~~~---~--~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
...++. |.... . +.....+...+...++..||.+|.+..+.+..+.
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 011111 11110 0 1122234567888999999999999999887654
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=235.65 Aligned_cols=211 Identities=24% Similarity=0.356 Sum_probs=177.8
Q ss_pred ccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCC
Q 006178 366 IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~ 444 (658)
||+|++|.||++...+ ++.+++|+........ ..+.+.+|++.+++++|++|+++++++.... ..+++|||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEELLREIEILKKLNHPNIVKLYGVFEDEN--HLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHHHHHHHHHHHhcCCCCeeeEeeeeecCC--eEEEEEecCCC
Confidence 6899999999999875 7888888875443211 3457899999999999999999999998876 78999999998
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchhhhhhcCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWKTILARSEKNP 523 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~ 523 (658)
++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~ 149 (215)
T cd00180 76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--L 149 (215)
T ss_pred CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--h
Confidence 99999987542 3589999999999999999999999 9999999999999999 89999999998876532211 1
Q ss_pred CcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHH
Q 006178 524 GTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602 (658)
Q Consensus 524 ~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (658)
.........|++||..... .++.++|+|++|+++++|
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------ 187 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------ 187 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------
Confidence 1222334568899998877 888999999999999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 603 DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 603 ~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 346799999999999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=245.39 Aligned_cols=133 Identities=18% Similarity=0.176 Sum_probs=109.1
Q ss_pred HhhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-----C---CCccceeeEEec
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----H---ENTGKLLGYCRE 429 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H---~nIv~l~~~~~~ 429 (658)
.+-..++||=|-|++||.+.+.. .+.||+|+++.. .+..+....||++|++++ | .+||++++.|..
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 34445899999999999999864 456666665321 233456778999999982 3 379999999976
Q ss_pred CCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec
Q 006178 430 SSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 430 ~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~ 499 (658)
.++ .+++||+|++ |-+|..+|.......++...+++|++||+.||.|||.+| +|||-||||+|||+.
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 543 3899999999 669999998776667999999999999999999999998 999999999999983
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=241.13 Aligned_cols=253 Identities=19% Similarity=0.167 Sum_probs=187.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~lv 438 (658)
..+|.|.- .|-.|.+. .++.||+|++...... ....++..+|..++..++|+||++++.++.-... ...|+|
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n--~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v 99 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN--QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV 99 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCcccc--CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence 45777776 55555543 5789999998665322 3344567899999999999999999999864331 157999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
||||. ++|.+.+.. .++-.+...|..|++.|++|||+. +|+||||||+||++..+..+||.|||+|+.-...
T Consensus 100 ~e~m~-~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 100 MELMD-ANLCQVILM----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred HHhhh-hHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcc
Confidence 99995 599998872 378889999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc------------
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE------------ 586 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~------------ 586 (658)
...+....+..|.|||++.+..+.+.+||||.||++.||++|+.-|.+ ...+.+|.+.....+.
T Consensus 172 ---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g-~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 172 ---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG-KDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred ---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC-chHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 222333445678999999998899999999999999999999988863 3344444332211100
Q ss_pred ---------cc-----cccc-CCcCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 ---------VM-----SYVV-DPELK---HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ---------~~-----~~~~-~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. .+.+ |.... +.+........+++.+||..||++|.+++++++.
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00 0000 00000 1112234557899999999999999999999976
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=253.09 Aligned_cols=199 Identities=17% Similarity=0.141 Sum_probs=162.8
Q ss_pred ccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||-|+||+|..++--|+ ..+|.|.+.+++ ..........+.|-.||...+.+=||++|-.|.+.+ .+|+||||+
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaD-Vl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd--nLYFVMdYI 711 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKAD-VLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMDYI 711 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHH-HHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC--ceEEEEecc
Confidence 6799999999999986554 456666664443 222233446788999999999999999999999988 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC---
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS--- 519 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~--- 519 (658)
+|||+-.+|-+.+ .+.+..++-++.++..|+++.|.. |+|||||||+|||||.+|.+||.|||++.-+.-..
T Consensus 712 PGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 712 PGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred CCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 9999999987554 488888889999999999999999 99999999999999999999999999986442100
Q ss_pred -----CC--------------------------------CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh
Q 006178 520 -----EK--------------------------------NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562 (658)
Q Consensus 520 -----~~--------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt 562 (658)
.. .....-.++.-|+|||++....|+..+|.||.|||||||+.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 00 00111234667999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 006178 563 GRPPCCKD 570 (658)
Q Consensus 563 G~~p~~~~ 570 (658)
|+.||..+
T Consensus 867 g~~pf~~~ 874 (1034)
T KOG0608|consen 867 GQPPFLAD 874 (1034)
T ss_pred CCCCccCC
Confidence 99999654
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-29 Score=248.63 Aligned_cols=268 Identities=17% Similarity=0.117 Sum_probs=200.7
Q ss_pred cccHHHHHHHHhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc------CCCcc
Q 006178 349 RFSRQELEVACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN------HENTG 421 (658)
Q Consensus 349 ~~~~~~l~~~~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~------H~nIv 421 (658)
.+.+.|+....+......|+|-|++|.+|.+. .|..||||.+...+ ...+.=++|+++|++|+ -.|++
T Consensus 423 rv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-----~M~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 423 RVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-----VMHKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred EEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-----HHhhhhhHHHHHHHHhhccCchhhhHHH
Confidence 45567777777777778899999999999976 47799999985443 23344568999999994 35899
Q ss_pred ceeeEEecCCCCceEEEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC
Q 006178 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 422 ~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 500 (658)
+++-.|...+ ++|||+|-+. -+|.++|++.+ ...|....+..++.|+.-||..|-.. +|+|.||||+|||+++
T Consensus 498 rl~r~F~hkn--HLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 498 RLFRHFKHKN--HLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNE 571 (752)
T ss_pred HHHHHhhhcc--eeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEecc
Confidence 9999998888 8999999984 59999998644 45688999999999999999999987 9999999999999997
Q ss_pred C-CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHH
Q 006178 501 D-FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWA 578 (658)
Q Consensus 501 ~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~ 578 (658)
. ..+||||||.|...... .-+......+|.|||++.+.+|+...|+||.||+||||+||+.-|.+...+ +..+.
T Consensus 572 ~k~iLKLCDfGSA~~~~en----eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~ 647 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASEN----EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLF 647 (752)
T ss_pred CcceeeeccCccccccccc----cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHH
Confidence 6 46899999988664322 112222346799999999999999999999999999999999998754322 11111
Q ss_pred HH--------hhcCCccccc--------------------------ccCC------------cCCCCCHHHHHHHHHHHH
Q 006178 579 KD--------YLELPEVMSY--------------------------VVDP------------ELKHFSYDDLKVICEVVN 612 (658)
Q Consensus 579 ~~--------~~~~~~~~~~--------------------------~~~~------------~~~~~~~~~~~~~~~li~ 612 (658)
.. ++........ .+.| .+..........+.+|+.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 00 0000000000 1111 011112334567889999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 006178 613 LCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 613 ~cl~~dP~~RPs~~evl~~ 631 (658)
.|+..||++|.|..|+++.
T Consensus 728 kml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHhccChhhcCCHHHHhcC
Confidence 9999999999999988764
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=226.44 Aligned_cols=247 Identities=12% Similarity=0.195 Sum_probs=177.4
Q ss_pred hhhcccccCCCCeeEEEEEecCC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGG-PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
++..+.+|+|.||.+-.++++.. ..+|+|.+.... ...++|.+|..---.| .|.||+.-|++..+... ..++
T Consensus 26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d-~YvF 99 (378)
T KOG1345|consen 26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD-AYVF 99 (378)
T ss_pred hhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc-eEEE
Confidence 44558899999999999999864 466666654322 2356799998866666 69999999886544332 5689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec--CCCCceeccccchhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla~~~ 515 (658)
++||++.|||..-+... .+.+....+++.|++.|+.|||++ .+||||||.+||||- +..++||||||..+..
T Consensus 100 ~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999999988653 478889999999999999999999 999999999999994 3458999999987654
Q ss_pred hhcCCCCCCcccccCccccCCccccc---C--CCCccccchhhHHHHHHHHhCCCCCCCC---CCcHHHHHHHhhcCCcc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEA---R--HLDVQGNIYAFGVLLLEIISGRPPCCKD---KGNLVDWAKDYLELPEV 587 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~---~--~~~~ksDVwS~Gvvl~elltG~~p~~~~---~~~~~~~~~~~~~~~~~ 587 (658)
......... ...|-+||.... + ...+.+|||.||+++|.++||+.||... +....+|.+........
T Consensus 174 g~tV~~~~~-----~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~ 248 (378)
T KOG1345|consen 174 GTTVKYLEY-----VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA 248 (378)
T ss_pred Cceehhhhh-----hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc
Confidence 322221111 123667887643 2 3578899999999999999999999642 23444554433222111
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+....+.+ .+.+.++.++-+.++|++|-...++.+.
T Consensus 249 ----~P~~F~~f----s~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 249 ----LPKKFNPF----SEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred ----Cchhhccc----CHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 11112222 3446678888999999999666655544
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=253.75 Aligned_cols=247 Identities=20% Similarity=0.202 Sum_probs=191.2
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
...+|+|+||.|||+++. .++..|+|.++..... ..+-..+|+-+++.++|||||.++|-+...+ ..++.|||
T Consensus 20 lqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d----d~~~iqqei~~~~dc~h~nivay~gsylr~d--klwicMEy 93 (829)
T KOG0576|consen 20 LQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD----DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD--KLWICMEY 93 (829)
T ss_pred eeeecCCcccchhhhcccccCchhhheeeeccCCc----cccccccceeeeecCCCcChHHHHhhhhhhc--CcEEEEEe
Confidence 378999999999999986 5667777777543321 2334678999999999999999999888777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|.+|+|++.-+-.+ ++++.++..+++...+||+|||+. +-+|||||-.||++++.+.+|++|||.+..+......
T Consensus 94 cgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred cCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhhh
Confidence 99999999876443 699999999999999999999999 9999999999999999999999999998877654433
Q ss_pred CCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
... ..+++.|||||+.. .+.|..++|||+.|+...|+---++|..+-......+ +-. ....+|--..
T Consensus 169 rks--fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~----LmT----kS~~qpp~lk 238 (829)
T KOG0576|consen 169 RKS--FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALF----LMT----KSGFQPPTLK 238 (829)
T ss_pred hhc--ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHH----Hhh----ccCCCCCccc
Confidence 333 34567899999874 4679999999999999999988888843211111111 100 1112222222
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+....+.+-++++.|+..+|++||+++.+++
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 34455677889999999999999999987664
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=227.52 Aligned_cols=198 Identities=24% Similarity=0.304 Sum_probs=165.3
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|++|.||++...+ +..+++|........ ...+.+.+|++.+++++|+|++++++++.... ..++++|
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e 77 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDPE--PLYLVME 77 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecCC--ceEEEEe
Confidence 45789999999999999875 788888887543321 23567899999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..... .+++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++|+|||.+........
T Consensus 78 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 78 YCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred ccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999999999975432 279999999999999999999999 999999999999999999999999998877643320
Q ss_pred CCCCcccccCccccCCccc-ccCCCCccccchhhHHHHHHHHhCCCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSL-EARHLDVQGNIYAFGVLLLEIISGRPPCCK 569 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~-~~~~~~~ksDVwS~Gvvl~elltG~~p~~~ 569 (658)
. ..........|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 154 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 A-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred c-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0 11122334568999998 667788899999999999999999999954
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=246.46 Aligned_cols=194 Identities=20% Similarity=0.239 Sum_probs=156.7
Q ss_pred ccccCCCCeeEEEEEecCCC-eEEEEEEeeecc---ccc-hhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTMKGGP-EIAVISLCIKEE---HWT-GYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~-~vavk~~~~~~~---~~~-~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+|+|+||.|+.|.++.+. +|++|.+.+.+- .+- ....-..-.|++||..++ |+||++++++|++.+ +.
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd--~y 644 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD--YY 644 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC--ee
Confidence 78999999999999998554 555665543321 110 011122456999999996 999999999999998 77
Q ss_pred EEEEEec-CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 436 MLVFDYA-SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 436 ~lv~E~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
||+||-- ++-+|.++|..+.+ +++.+...|++||+.|+++||++ +|||||||-+|+.+|.+|-+||+|||.|..
T Consensus 645 yl~te~hg~gIDLFd~IE~kp~--m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 645 YLETEVHGEGIDLFDFIEFKPR--MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred EEEecCCCCCcchhhhhhccCc--cchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhh
Confidence 9999975 56799999987664 99999999999999999999999 999999999999999999999999998875
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
.... ..... .++.-|.|||++.+.+| +..-|||++||+||.++....||+
T Consensus 720 ~ksg--pfd~f--~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 720 TKSG--PFDVF--VGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hcCC--Cccee--eeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 4221 12222 33445788999999887 578899999999999999999985
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-27 Score=271.65 Aligned_cols=199 Identities=17% Similarity=0.220 Sum_probs=140.0
Q ss_pred hccC-CCccceeeEEecCC-----CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCee
Q 006178 414 RINH-ENTGKLLGYCRESS-----PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487 (658)
Q Consensus 414 ~l~H-~nIv~l~~~~~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iv 487 (658)
+++| +||++++++|.... ....+.+|||+ +++|++++.... ..+++.+++.|+.||++||+|||++ +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 4455 58888888872211 11457788988 569999997543 3599999999999999999999999 999
Q ss_pred eccCCCcceeecC-------------------CCCceeccccchhhhhhcCC-------C-------CCCcccccCcccc
Q 006178 488 ISELNSSAVYLTE-------------------DFSPKLVDFDSWKTILARSE-------K-------NPGTLGSQGAICI 534 (658)
Q Consensus 488 HrDlkp~NILl~~-------------------~~~~kl~DFGla~~~~~~~~-------~-------~~~~~~~~~~~~~ 534 (658)
||||||+||||+. ++.+|++|||+++....... . .......++..||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999954 45677778887764321000 0 0001123456699
Q ss_pred CCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHc
Q 006178 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLC 614 (658)
Q Consensus 535 aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 614 (658)
|||++.+..++.++|||||||+||||++|.+|+............. ...+.. ........+++.+|
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~~~~~~~~ 248 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR----------VLPPQI----LLNWPKEASFCLWL 248 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHh----------hcChhh----hhcCHHHHHHHHHh
Confidence 9999999999999999999999999999998874322111111110 011110 11123356888999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 006178 615 VNPDITKRPSMQELCTM 631 (658)
Q Consensus 615 l~~dP~~RPs~~evl~~ 631 (658)
|+.+|.+||++.|+++.
T Consensus 249 L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 249 LHPEPSCRPSMSELLQS 265 (793)
T ss_pred CCCChhhCcChHHHhhc
Confidence 99999999999999864
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=265.68 Aligned_cols=218 Identities=34% Similarity=0.607 Sum_probs=150.0
Q ss_pred chhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCC
Q 006178 25 ATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGN 104 (658)
Q Consensus 25 ~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N 104 (658)
.+.|..||++||+++. +|.+.+.+|+. ..+||.|.||+|+. .++|+.|+|++|+++|.+++.+..+++|+.|+|++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 5688999999999995 67777899975 46899999999985 569999999999999999999999999999999999
Q ss_pred cccccCCcccC-CCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 105 NLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 105 ~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
++.|.+|..+. .+++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+++.+|
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 181 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIP 181 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCC
Confidence 99988887654 777788887777777766553 335555555555555555555555555555555555555555554
Q ss_pred CCCCC----------------------CccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccCcccCCCC--
Q 006178 184 AGSNS----------------------GYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYL-- 234 (658)
Q Consensus 184 ~~~~~----------------------~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~l~~l-- 234 (658)
..... ....++..++++.|.+++ +.++++|++|++++|.++|.+|..++++
T Consensus 182 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 261 (968)
T PLN00113 182 NSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKN 261 (968)
T ss_pred hhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCC
Confidence 42111 011244445555555442 3456666666666666666666655443
Q ss_pred -CCCccCCCccCCC
Q 006178 235 -PSTSFQGNCLQNK 247 (658)
Q Consensus 235 -~~~~~~~n~~~~~ 247 (658)
..+.+++|.+.+.
T Consensus 262 L~~L~L~~n~l~~~ 275 (968)
T PLN00113 262 LQYLFLYQNKLSGP 275 (968)
T ss_pred CCEEECcCCeeecc
Confidence 3445566655543
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-26 Score=213.01 Aligned_cols=168 Identities=15% Similarity=0.158 Sum_probs=125.8
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
|+|.++++.++ ..+++.++..|+.||++||+|||++ + ||+|||+++++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc-----
Confidence 68999997543 3599999999999999999999998 5 999999999999999 99887643211
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHH
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDL 604 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (658)
..++..|+|||++.+..++.++|||||||++|||+||+.||..... .............. ..+.....+....
T Consensus 64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 136 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-LSAILEILLNGMPA----DDPRDRSNLESVS 136 (176)
T ss_pred --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-hcHHHHHHHHHhcc----CCccccccHHHHH
Confidence 1345779999999999999999999999999999999999964322 11111111110000 0011111122233
Q ss_pred H--HHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 605 K--VICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 605 ~--~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
. .+.+++.+||+.+|.+||++.|+++.+..+.
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3 6899999999999999999999999987654
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-26 Score=223.62 Aligned_cols=252 Identities=19% Similarity=0.195 Sum_probs=183.8
Q ss_pred ccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
++||+|.|++||++.+.. .+.||+|.+...+.. .++.+|+++|..+ .+.||+++.+++...+ ...+|
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p------~ri~~El~~L~~~gG~~ni~~~~~~~rnnd--~v~iv 113 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP------SRILNELEMLYRLGGSDNIIKLNGCFRNND--QVAIV 113 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccCc------hHHHHHHHHHHHhccchhhhcchhhhccCC--eeEEE
Confidence 799999999999998643 568999998665533 4588999999999 6999999999998888 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTILA 517 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~~~~ 517 (658)
+||++.-+..++.. .++..++..+++.+..||+|+|++ |||||||||+|+|.+.. +.-.|.|||+|.....
T Consensus 114 lp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred ecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHh
Confidence 99999988888876 378899999999999999999999 99999999999999854 5778999999973210
Q ss_pred cC-------------CC----------------CCCc-------------ccccCccccCCccccc-CCCCccccchhhH
Q 006178 518 RS-------------EK----------------NPGT-------------LGSQGAICILPSSLEA-RHLDVQGNIYAFG 554 (658)
Q Consensus 518 ~~-------------~~----------------~~~~-------------~~~~~~~~~aPE~~~~-~~~~~ksDVwS~G 554 (658)
.. .. ..+. ...+++.|.|||++.. ...++++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 00 0000 0112344688999875 5578999999999
Q ss_pred HHHHHHHhCCCCCCCCCCc---HHHHHHH--------hhcCCcc--ccc---------------ccC-CcCC--------
Q 006178 555 VLLLEIISGRPPCCKDKGN---LVDWAKD--------YLELPEV--MSY---------------VVD-PELK-------- 597 (658)
Q Consensus 555 vvl~elltG~~p~~~~~~~---~~~~~~~--------~~~~~~~--~~~---------------~~~-~~~~-------- 597 (658)
||++-+++++.||....++ +.+.+.. .....+. +.+ -++ ....
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 9999999999999643322 1111100 0000000 000 000 0000
Q ss_pred --CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 --HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 --~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+..+.+++.+|++.||.+|.|++|.++.
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0011123478899999999999999999999864
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-26 Score=213.76 Aligned_cols=250 Identities=22% Similarity=0.372 Sum_probs=191.4
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+|..+|.+...|..|+|++.+ ..+++|.+...+ ......++|..|.-.|+-+.||||+.++|.|..+. ...++..
T Consensus 193 nl~tkl~e~hsgelwrgrwqg-ndivakil~vr~--~t~risrdfneefp~lrifshpnilpvlgacnspp--nlv~isq 267 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQG-NDIVAKILNVRE--VTARISRDFNEEFPALRIFSHPNILPVLGACNSPP--NLVIISQ 267 (448)
T ss_pred hhhhhhccCCCcccccccccC-cchhhhhhhhhh--cchhhcchhhhhCcceeeecCCchhhhhhhccCCC--CceEeee
Confidence 344578899999999999975 456667664433 33344567999999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec--cccchhhhhhc
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV--DFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~--DFGla~~~~~~ 518 (658)
||+.|+|+.++++.....++-.+..+++.+||+|++|||+. .|-|..--|.+..+++|++.+++|+ |--++-
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf----- 341 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF----- 341 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee-----
Confidence 99999999999988777788899999999999999999996 4445555788999999999998885 221111
Q ss_pred CCCCCCcccccCccccCCcccccCCCC---ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLD---VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~---~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
+. ......+.||+||.++..+-+ .++|+|||.+++||+.|...||.+-..-... +.-.+..-
T Consensus 342 --qe--~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg-----------mkialegl 406 (448)
T KOG0195|consen 342 --QE--VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG-----------MKIALEGL 406 (448)
T ss_pred --ec--cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh-----------hhhhhccc
Confidence 00 111124669999999876644 5899999999999999999999653321111 11111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
....|+.....+.+|+.-|+..||.+||.+..|+-.|++++
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 12355666778899999999999999999999999999864
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=212.57 Aligned_cols=173 Identities=16% Similarity=0.095 Sum_probs=124.0
Q ss_pred hhcccccCCCCeeEEEEEec--CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhccCCCccc-eeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGK-LLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~-l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||+||+|++. ++..+|||++...... ......+.|.+|+++|++++|+|++. ++++ + ..+
T Consensus 21 ~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~--~~~ 94 (365)
T PRK09188 21 VETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G--KDG 94 (365)
T ss_pred eEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C--CcE
Confidence 34588999999999999875 4666788876422110 12234567999999999999999985 4432 2 459
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccC-CCcceeecCCCCceeccccchhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL-NSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGla~~~ 515 (658)
+||||+++++|... .. .. ...++.|+++||+|||++ +|+|||| ||+|||++.++.+||+|||+|+.+
T Consensus 95 LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 95 LVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred EEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 99999999999732 11 11 146789999999999999 9999999 999999999999999999999876
Q ss_pred hhcCCCCC-----C-cccccCccccCCcccccCC------CCccccch
Q 006178 516 LARSEKNP-----G-TLGSQGAICILPSSLEARH------LDVQGNIY 551 (658)
Q Consensus 516 ~~~~~~~~-----~-~~~~~~~~~~aPE~~~~~~------~~~ksDVw 551 (658)
........ . ........|+|||.+...+ .+..+|-|
T Consensus 163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 43321111 0 1112234578899886432 23446666
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=208.76 Aligned_cols=272 Identities=16% Similarity=0.152 Sum_probs=191.5
Q ss_pred hhhcccccCCCCeeEEEEEecCCC--eEEEEEEeeeccccchhhHHHHHHHHHHHHhccC----CCccceeeEEe-cCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINH----ENTGKLLGYCR-ESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~-~~~~ 432 (658)
+...+.||+|+||.||.+...... .+|+|......... ...+..|+.++..+.+ +++.++++... ...
T Consensus 20 ~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~----~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~- 94 (322)
T KOG1164|consen 20 YKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK----PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED- 94 (322)
T ss_pred eEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC----CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc-
Confidence 334589999999999999987643 55655543322111 1146789999988863 58889998884 444
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-----CCceec
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-----FSPKLV 507 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-----~~~kl~ 507 (658)
..++||+.+ |.+|.++........++..+..+|+.|++.+|++||+. |++||||||+|++++.. ..+.|.
T Consensus 95 -~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 95 -FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred -eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEE
Confidence 679999999 77999988655545799999999999999999999999 99999999999999865 358999
Q ss_pred cccchh--hhhhcCCC----C-C-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHH
Q 006178 508 DFDSWK--TILARSEK----N-P-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDW 577 (658)
Q Consensus 508 DFGla~--~~~~~~~~----~-~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~ 577 (658)
|||+|+ .+...... . . .....++..|.++....+...+.+.|+||++.++.|++.|..||...... ....
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 999998 43222211 1 1 11122567788888888999999999999999999999999999654321 1111
Q ss_pred HHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhh
Q 006178 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAE 653 (658)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~ 653 (658)
...... .. ... . ....+.++.++...+-..+..++|....+...+++....... ....+.+|+.
T Consensus 250 ~~~~~~--~~----~~~-~---~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~--~~~~~~dw~~ 313 (322)
T KOG1164|consen 250 EKDPRK--LL----TDR-F---GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGS--KEDSPFDWEV 313 (322)
T ss_pred HHHhhh--hc----ccc-c---cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCC--CCCCCCcccc
Confidence 111100 00 000 1 112234455666666668999999999999998877654311 2225666764
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-24 Score=233.34 Aligned_cols=257 Identities=14% Similarity=0.143 Sum_probs=182.9
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeee--ccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~--~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
..++|.|++|.|+.+... .....+.|....+ ...........+..|+.+-..++|+|++..+..+.+.. ...-+|
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~--~~~~~m 400 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID--GILQSM 400 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc--cchhhh
Confidence 478999999988877754 3333444433211 11111112223667888888999999998888777665 334459
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||++ ||+.++.... .++..++..+++|+..|++|+|+. ||.|||+|++|++++.++.+||+|||.+..+....
T Consensus 401 E~~~~-Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 9999998653 388899999999999999999999 99999999999999999999999999887654333
Q ss_pred CC--CCCcccccCccccCCcccccCCCCc-cccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EK--NPGTLGSQGAICILPSSLEARHLDV-QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~-ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
+. .......+...|+|||.+.+..|++ ..||||.||++..|++|+.||.........+.... ...........
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~----~~~~~~~~~~~ 550 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN----YSDQRNIFEGP 550 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc----cccccccccCh
Confidence 32 2222233456689999999999986 67999999999999999999864322211110000 00000011111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......+.....++.+|++.||.+|.|+++|++.
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 12234456778899999999999999999999864
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.3e-21 Score=197.72 Aligned_cols=258 Identities=22% Similarity=0.265 Sum_probs=191.1
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC-CccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||.|+||.||++... ..+++|.+....... ......+.+|+.+++.+.|+ +++++++++.... ..+++++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~ 79 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESK-SKEVERFLREIQILASLNHPPNIVKLYDFFQDEG--SLYLVMEY 79 (384)
T ss_pred EEeecCCCCeEEEEEEec--cEEEEEeechhhccc-hhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC--EEEEEEec
Confidence 467999999999999987 677888775544321 12456799999999999888 7999999996655 56999999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-CceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~ 519 (658)
+.++++.+++..... ..++......++.|++.+++|+|+. +++|||+||+||+++... .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977764432 2589999999999999999999999 999999999999999988 79999999987554332
Q ss_pred CCC----CCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCCcc-cc
Q 006178 520 EKN----PGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEV-MS 589 (658)
Q Consensus 520 ~~~----~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~~~-~~ 589 (658)
... ......++..|++||.+.+ ..++...|+||+|++++++++|..||...... .............. ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 211 1233445677999999987 57889999999999999999999997654431 11111111111110 00
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... ........+.+++.+|+..+|..|.++.+....
T Consensus 237 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 237 SPLSPS---NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccCcc---ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000 002223567799999999999999998877664
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-21 Score=183.56 Aligned_cols=141 Identities=12% Similarity=0.146 Sum_probs=108.8
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchh----------------------hHHHHHHHHHHHHhccCCCcc
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGY----------------------LELYFQREVADLARINHENTG 421 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~nIv 421 (658)
..||+|+||.||+|...+|+.||+|.+.......... ......+|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5799999999999999889999999986542111000 012234599999999888875
Q ss_pred ceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHh-hhcCCCCeeeccCCCcceeecC
Q 006178 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 422 ~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~ivHrDlkp~NILl~~ 500 (658)
....+... ..++||||++++++....... ..++..+...++.|++.+|+|+ |+. +|+||||||+|||++
T Consensus 83 ~p~~~~~~----~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 83 CPEPILLK----SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCcEEEec----CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 54443322 238999999887776553322 2589999999999999999999 687 999999999999998
Q ss_pred CCCceeccccchhh
Q 006178 501 DFSPKLVDFDSWKT 514 (658)
Q Consensus 501 ~~~~kl~DFGla~~ 514 (658)
++.++|+|||+|..
T Consensus 153 ~~~v~LiDFG~a~~ 166 (190)
T cd05147 153 DGKLYIIDVSQSVE 166 (190)
T ss_pred CCcEEEEEcccccc
Confidence 47899999998864
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.4e-22 Score=206.46 Aligned_cols=217 Identities=21% Similarity=0.326 Sum_probs=164.6
Q ss_pred HHhccCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe-eecc
Q 006178 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPF-TISE 490 (658)
Q Consensus 412 l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i-vHrD 490 (658)
|+.+.|.|+.+++|.+.++. ..++|.+||..|+|.|.+... ...++|.-...+.++|+.||+|+|+. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--EMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCC--ceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 45689999999999999986 789999999999999999863 34699999999999999999999987 44 9999
Q ss_pred CCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-------CCCccccchhhHHHHHHHHhC
Q 006178 491 LNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-------HLDVQGNIYAFGVLLLEIISG 563 (658)
Q Consensus 491 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-------~~~~ksDVwS~Gvvl~elltG 563 (658)
+++.|.++|..+.+||+|||+.....................|.|||.+... ..+.++||||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999987765331112222223345678999998763 146789999999999999999
Q ss_pred CCCCCCCCC--cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 564 RPPCCKDKG--NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 564 ~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+.||+.... ...+.+..... .......|.+.... +..+.+..++.+||..+|.+||++++|-..++.+...
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~---~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKK---GGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cCccccccccCChHHHHHHHHh---cCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 999975322 11122111111 11122233332222 3445788999999999999999999999999887664
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-22 Score=222.06 Aligned_cols=248 Identities=16% Similarity=0.182 Sum_probs=179.7
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||++.|=+|.+|+++.|. |+||.+.++.....-...++-..|++ ....+|||++.+.-+..... ..|||=+
T Consensus 26 ~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k--AAylvRq 101 (1431)
T KOG1240|consen 26 HYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK--AAYLVRQ 101 (1431)
T ss_pred eeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH--HHHHHHH
Confidence 34588999999999999998886 88888776654433333334444555 45559999999988766555 5689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|..+ +|+|.+..++ .+...+.+-|+.|++.||..+|.. +|+|||||.+|||++.-.-+.|+||..-+...-..+
T Consensus 102 yvkh-nLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9966 9999997554 488888999999999999999999 999999999999999988899999986554322222
Q ss_pred CCCCc-----ccccCccccCCcccccC----------C-CCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhh-
Q 006178 521 KNPGT-----LGSQGAICILPSSLEAR----------H-LDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYL- 582 (658)
Q Consensus 521 ~~~~~-----~~~~~~~~~aPE~~~~~----------~-~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~- 582 (658)
..... .......|.|||.+... . .+++.||||+|||+.||++ |++||. +.+......
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-----LSQL~aYr~~ 250 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-----LSQLLAYRSG 250 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-----HHHHHhHhcc
Confidence 11111 11234569999987531 2 6789999999999999998 688884 111111000
Q ss_pred ---cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 583 ---ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 583 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.....+..+-|. .+.+++..|++.||++|-++++.++.-.+
T Consensus 251 ~~~~~e~~Le~Ied~-----------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 251 NADDPEQLLEKIEDV-----------SLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred CccCHHHHHHhCcCc-----------cHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 000111222222 35699999999999999999999987444
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=179.91 Aligned_cols=141 Identities=13% Similarity=0.170 Sum_probs=111.2
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccc----------------------hhhHHHHHHHHHHHHhccCCCcc
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT----------------------GYLELYFQREVADLARINHENTG 421 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~H~nIv 421 (658)
..||+|+||.||+|++.+|+.||||.+........ ......+.+|.+.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 57999999999999988899999999865431100 00122346899999999999886
Q ss_pred ceeeEEecCCCCceEEEEEecCCCChhhh-hccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeec
Q 006178 422 KLLGYCRESSPFTRMLVFDYASNGTLYEH-LHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 422 ~l~~~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~ 499 (658)
....+.... .++||||++++++... +.. ..++..+...++.|++.++.++|+ . +|+||||||+||+++
T Consensus 83 ~p~~~~~~~----~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 83 VPEPILLKK----NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CceEEEecC----CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 555544332 3899999988755433 332 247888999999999999999999 8 999999999999999
Q ss_pred CCCCceeccccchhhh
Q 006178 500 EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~ 515 (658)
++.++|+|||++..+
T Consensus 153 -~~~~~liDFG~a~~~ 167 (190)
T cd05145 153 -DGKPYIIDVSQAVEL 167 (190)
T ss_pred -CCCEEEEEcccceec
Confidence 789999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-21 Score=184.72 Aligned_cols=172 Identities=13% Similarity=0.176 Sum_probs=128.0
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhh-----HHHHHHHHHHHHhccCCCccceeeEEecCC-----
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL-----ELYFQREVADLARINHENTGKLLGYCRESS----- 431 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~-----~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----- 431 (658)
..+++|.|+||.||.+.. +++.+|+|.+..+........ .+.+.+|+..+.++.|++|..+.+++....
T Consensus 35 ~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~ 113 (232)
T PRK10359 35 TIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLR 113 (232)
T ss_pred EEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccc
Confidence 348999999999999766 567899998854432221111 122689999999999999999999866432
Q ss_pred -CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 432 -PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 432 -~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
....++||||++|.+|.++.. ++. ....+++.++..+|+. +++|||+||+||++++++ ++|+|||
T Consensus 114 ~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 114 YAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred ccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECC
Confidence 114689999999999988742 333 3456999999999999 999999999999999988 9999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt 562 (658)
.......... . ..+.....|+.++|+||||+++.....
T Consensus 180 ~~~~~~e~~a--~------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 180 GKRCTAQRKA--K------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred Ccccccchhh--H------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 7654311100 0 113344557789999999999876653
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=180.83 Aligned_cols=258 Identities=13% Similarity=0.141 Sum_probs=186.1
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
..++||+|+||..+.|+. -++..||+|.-..+++. -++..|.+..+.| ..+.|..+|-|..++. +-.||+
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A------PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~--~NiLVi 103 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA------PQLRDEYRTYKLLGGTEGIPQVYYFGQEGK--YNILVI 103 (449)
T ss_pred eccccccCcceeeecccccccCceEEEEeccccCCc------chHHHHHHHHHHHcCCCCCCceeeeccccc--hhhhhh
Confidence 358999999999999994 47889999876555433 3577888888888 5789999887776665 668999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-----Cceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-----SPKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-----~~kl~DFGla~~ 514 (658)
|.+ |.||+|+..-.++ .++..++..||.|+..-++|+|++ .+|.|||||+|+||...+ .+.++|||+|+.
T Consensus 104 dLL-GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhh-CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 999 7799988764443 599999999999999999999999 999999999999998544 579999999998
Q ss_pred hhhcCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 515 ILARSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 515 ~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
+.+..... ....-+++.+||+-....+.+.+.+.|.=|+|-|+++.+-|..||.+-...-.......+.+ . .
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe--~-K 255 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGE--T-K 255 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcc--c-c
Confidence 86543221 22334567889998888888999999999999999999999999976443211110000000 0 0
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
. ...+.......+.++..-+.-.-..+-.+-|..+-+...+.++.+
T Consensus 256 r--~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 256 R--STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred c--cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 0 000011112234455555555555677778887666666655544
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.9e-21 Score=174.69 Aligned_cols=254 Identities=13% Similarity=0.136 Sum_probs=177.0
Q ss_pred hhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~lv 438 (658)
...++||+|+||.+|.|.. .+|.+||+|.-..+.. .-++..|..+.+.++| ..|..+..|..+.. +-.+|
T Consensus 18 ~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~------hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~--ynvlV 89 (341)
T KOG1163|consen 18 KLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK------HPQLLYESKVYRILQGGVGIPHIRHYGTEKD--YNVLV 89 (341)
T ss_pred EEEEeecCCchhheeeeeeccCCceEEEEeecccCC------CcchhHHHHHHHHhccCCCCchhhhhccccc--cceee
Confidence 3448999999999999985 5789999987543322 2357789999999964 56777777777776 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~ 515 (658)
||.. |.||+++..-..+ .++..+.+-.+-|++.-++|+|.+ ++|||||||+|+|..-+ ..+.++|||+|+.+
T Consensus 90 MdLL-GPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred eecc-CccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 9999 7799998864433 489999999999999999999999 99999999999998733 46899999999987
Q ss_pred hhcCCC-----CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 516 LARSEK-----NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 516 ~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
.+.... .....-+++.+|.+-....+...+.+.|+=|+|.+|.+.-.|..||.+-...-.......... .
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E-----k 239 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE-----K 239 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH-----h
Confidence 643321 222333455666555555556678899999999999999999999976432211110000000 0
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
..+..+.......|.++.-.+.-|-..--++-|...-+-+.+
T Consensus 240 K~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF 281 (341)
T KOG1163|consen 240 KMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF 281 (341)
T ss_pred hcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence 001011111112234566667777777777777755444433
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.4e-20 Score=172.48 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=129.9
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..|++|+||+||.+.. ++.+++.+.+.....-........+.+|+++|+++ +|+++++++++ + ..+++|||+
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~--~~~lvmeyI 80 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D--GRHLDRSYL 80 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c--CEEEEEeee
Confidence 6799999999997766 55666655553322211112233588999999999 56889999886 2 458999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccC-CCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL-NSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
.|.+|.+.+.. ....++.|++++|+++|++ ||+|||| ||+|||++.++.++|+|||+|.........
T Consensus 81 ~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 81 AGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred cCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99888764321 1135788999999999999 9999999 799999999999999999999754322110
Q ss_pred -----CCC------cccccCccccCCccccc-CCCC-ccccchhhHHHHHHHHhCCCCCCC
Q 006178 522 -----NPG------TLGSQGAICILPSSLEA-RHLD-VQGNIYAFGVLLLEIISGRPPCCK 569 (658)
Q Consensus 522 -----~~~------~~~~~~~~~~aPE~~~~-~~~~-~ksDVwS~Gvvl~elltG~~p~~~ 569 (658)
... ......+.|+.|+...- ...+ ...+.++-|.-+|.++|+..+...
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 000 00011222333433221 1223 466888999999999999988643
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-20 Score=179.98 Aligned_cols=233 Identities=17% Similarity=0.191 Sum_probs=147.1
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc----------CCCccceeeEEecC-
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN----------HENTGKLLGYCRES- 430 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~----------H~nIv~l~~~~~~~- 430 (658)
.+.||.|+++.||.+++.. ++++|+|...... .......+++++|.-....+. |-.++..++...-.
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3789999999999999975 7889999887665 333444567777775555532 22233333322211
Q ss_pred -------CC----C---ceEEEEEecCCCChhhhhcc---CC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccC
Q 006178 431 -------SP----F---TRMLVFDYASNGTLYEHLHY---GE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL 491 (658)
Q Consensus 431 -------~~----~---~~~lv~E~~~~gsL~~~l~~---~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDl 491 (658)
.+ + ..+++|+-+ .+||.+++.. .. ...+....++.+..|+++.+++||+. |++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 00 0 236788888 4599888651 11 12344556778889999999999999 9999999
Q ss_pred CCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCccccc--------CCCCccccchhhHHHHHHHHhC
Q 006178 492 NSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA--------RHLDVQGNIYAFGVLLLEIISG 563 (658)
Q Consensus 492 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~ksDVwS~Gvvl~elltG 563 (658)
||+|++++.+|.++|+||+........... ...+..|.+||.... -.++.+.|.|++|+++|.|.+|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 999999999999999999865543221110 112233556776533 2478899999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCC
Q 006178 564 RPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKR 622 (658)
Q Consensus 564 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R 622 (658)
..||...... ... +.....+. +.++.+..||..+|+.+|.+|
T Consensus 247 ~lPf~~~~~~-------------~~~---~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPE-------------ADP---EWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGG-------------STS---GGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCcc-------------ccc---cccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999632110 000 01334445 778889999999999999988
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-20 Score=197.42 Aligned_cols=227 Identities=17% Similarity=0.126 Sum_probs=176.2
Q ss_pred cccCCCCeeEEEEE----ecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEE
Q 006178 365 IIGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~----~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+|+|+||.|+.++ .+.+.-+|.|..+.+........ ....|..++..++ ||.+|++.-.+..+. ..++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~--~t~~er~il~~~~~~~f~v~lhyafqt~~--kl~l~l 76 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT--HTKQERIILAFVHNTPFLVKLHYAFQTDG--KLYLIL 76 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc--ccccHHHHHhhccCCCceeeeeeeecccc--chhHhh
Confidence 37999999998765 23456677766654442221111 4556888888886 999999998888877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
+|..+|+|...+..... +++.....+...++-|++++|+. +|+|||+|++||+++.+|.+|+.|||+++......
T Consensus 77 d~~rgg~lft~l~~~~~--f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~ 151 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKEVM--FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK 151 (612)
T ss_pred hhcccchhhhccccCCc--hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhh
Confidence 99999999988875543 67777888888999999999999 99999999999999999999999999998865443
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .+++.|||||++. ....++|.||||++++||+||..||.. +..+.... .. ...
T Consensus 152 ~~------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------~~~~~Il~----------~~-~~~ 206 (612)
T KOG0603|consen 152 IA------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------DTMKRILK----------AE-LEM 206 (612)
T ss_pred hc------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------HHHHHHhh----------hc-cCC
Confidence 32 5678899999988 567889999999999999999999964 11111111 01 124
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
|.+......+++..+...+|..|--.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 55666777889999999999999644
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-19 Score=170.90 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=103.7
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-----cCCCccceeeEEecCCC-Cc-eE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-----NHENTGKLLGYCRESSP-FT-RM 436 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~l~~~~~~~~~-~~-~~ 436 (658)
+.||+|+||.||. +++....+||++..... ...+.+.+|+.+++++ +||||++++|++.++.. .. ..
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEecccc----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 6899999999996 55444457887754322 1345789999999999 57999999999987642 12 33
Q ss_pred EEEEe--cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHhhhcCCCCeeeccCCCcceeecC----CCCceeccc
Q 006178 437 LVFDY--ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL-KYLHTELGPPFTISELNSSAVYLTE----DFSPKLVDF 509 (658)
Q Consensus 437 lv~E~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL-~yLH~~~~~~ivHrDlkp~NILl~~----~~~~kl~DF 509 (658)
+|+|| +++|+|.+++.+. .+++. ..++.|++.++ +|||++ +|+||||||+|||++. +..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 5579999999753 25555 35678888888 999999 9999999999999974 347999995
Q ss_pred cc
Q 006178 510 DS 511 (658)
Q Consensus 510 Gl 511 (658)
+.
T Consensus 154 ~G 155 (210)
T PRK10345 154 IG 155 (210)
T ss_pred CC
Confidence 53
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=193.83 Aligned_cols=133 Identities=37% Similarity=0.653 Sum_probs=79.8
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCC-----CccceeecCCC----CCEEEEEecCCCCcccCCccccCCC
Q 006178 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPC-----HWTGIACSDAR----DRVLKINISGSSLKGFLAPELGLLT 94 (658)
Q Consensus 24 ~~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c-----~w~gv~C~~~~----~~v~~l~L~~n~l~g~~~~~~~~l~ 94 (658)
....|..||+++|+.+. ++. ..+|+. +|| .|.||.|.... ..|+.|+|++|.++|.+|+.++.|+
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~--~~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPL--RFGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred cCchHHHHHHHHHHhcC-Ccc--cCCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 45678999999999985 332 247963 466 69999995211 1355666666666665555555555
Q ss_pred CCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhh
Q 006178 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL 162 (658)
Q Consensus 95 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 162 (658)
+|+.|+|++|++.|.+|..++.+++|+.|||++|+|+|.+|..+++|++|+.|+|++|+|+|.+|..+
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l 510 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHH
Confidence 55555555555555555555555555555555555555555555555555555555555555554444
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.6e-19 Score=173.03 Aligned_cols=200 Identities=21% Similarity=0.181 Sum_probs=140.4
Q ss_pred cCCCccceeeEEecCC-------------------------CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHH
Q 006178 416 NHENTGKLLGYCRESS-------------------------PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470 (658)
Q Consensus 416 ~H~nIv~l~~~~~~~~-------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~q 470 (658)
+|||||++.++|.+.- +...|+||.-++. +|.+++..+. .+...+.-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHH
Confidence 5888888887765421 2257999998866 9999997653 466777788999
Q ss_pred HHHHHHHhhhcCCCCeeeccCCCcceeec--CCC--CceeccccchhhhhhcC---CCCCCccc-ccCccccCCcccccC
Q 006178 471 IARGLKYLHTELGPPFTISELNSSAVYLT--EDF--SPKLVDFDSWKTILARS---EKNPGTLG-SQGAICILPSSLEAR 542 (658)
Q Consensus 471 ia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~--~~kl~DFGla~~~~~~~---~~~~~~~~-~~~~~~~aPE~~~~~ 542 (658)
+++|+.|||++ +|.|||+|++|||+. +|. ...|+|||++-.-.... ........ .+...-||||+....
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 999999999999984 554 45789999764321100 11111111 123457899998643
Q ss_pred C-----C-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccC
Q 006178 543 H-----L-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVN 616 (658)
Q Consensus 543 ~-----~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 616 (658)
+ . -.|+|.|+.|.+.||+++...||+..+.-..+. .......+...++.++..+.+++...++
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~-----------r~Yqe~qLPalp~~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT-----------RTYQESQLPALPSRVPPVARQLVFDLLK 495 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech-----------hhhhhhhCCCCcccCChHHHHHHHHHhc
Confidence 2 1 258999999999999999999997633211110 0011223445566677778899999999
Q ss_pred CCCCCCCCHHHHHHHHh
Q 006178 617 PDITKRPSMQELCTMLE 633 (658)
Q Consensus 617 ~dP~~RPs~~evl~~L~ 633 (658)
.||++|++..-....|.
T Consensus 496 r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVLN 512 (598)
T ss_pred CCccccCCccHHHhHHH
Confidence 99999998665555443
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-18 Score=166.21 Aligned_cols=141 Identities=15% Similarity=0.196 Sum_probs=108.1
Q ss_pred hcccccCCCCeeEEEEE--ecCCCeEEEEEEeeecccc--------------------chhhHHHHHHHHHHHHhccCC-
Q 006178 362 FSNIIGSSPDSLVYKGT--MKGGPEIAVISLCIKEEHW--------------------TGYLELYFQREVADLARINHE- 418 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~--~~~~~~vavk~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~H~- 418 (658)
+.+.||+|+||.||+|. ..+|+.||+|.+....... .......+.+|++++.++.+.
T Consensus 32 i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~ 111 (237)
T smart00090 32 IGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG 111 (237)
T ss_pred hCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44889999999999998 5688999999886542110 001123467899999999753
Q ss_pred -CccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-eeeccCCCcce
Q 006178 419 -NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP-FTISELNSSAV 496 (658)
Q Consensus 419 -nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-ivHrDlkp~NI 496 (658)
.+.+++++ . ..++||||+++++|........ .+...+...++.|++.+++|||++ + ++||||||+||
T Consensus 112 i~~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NI 180 (237)
T smart00090 112 VPVPKPIAW---R---RNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNI 180 (237)
T ss_pred CCCCeeeEe---c---CceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhE
Confidence 33444432 2 2389999999988877653222 356667789999999999999999 9 99999999999
Q ss_pred eecCCCCceeccccchhh
Q 006178 497 YLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 497 Ll~~~~~~kl~DFGla~~ 514 (658)
+++ ++.++|+|||.+..
T Consensus 181 li~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EEE-CCCEEEEEChhhhc
Confidence 999 88999999998764
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.1e-18 Score=163.50 Aligned_cols=138 Identities=16% Similarity=0.192 Sum_probs=112.4
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|++|.||+|.. ++..+++|+........ .......+.+|++++..+.|+++.....++.+.+ ..++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE--NFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC--CCEEEE
Confidence 4689999999999988 56778888764332111 1122346889999999999999988777776655 568999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
||+++++|.+++... .+ ++..++.+++.+|.++|+. +++|||++|+||+++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998643 22 8889999999999999999 999999999999999 78899999997653
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.3e-18 Score=189.09 Aligned_cols=244 Identities=17% Similarity=0.168 Sum_probs=166.3
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCCCceEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.||+|+||.||+|...+|+.||+|.-.... .+. |.--.+++.||+ -+-|..+...+...+ ..++|+
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~--~S~lv~ 773 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPN-PWE------FYICLQVMERLKPQMLPSIMHISSAHVFQN--ASVLVS 773 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCC-cee------eeehHHHHHhhchhhhcchHHHHHHHccCC--cceeee
Confidence 38899999999999999999999988754432 221 222334445554 234555555544445 458999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-------CCCceeccccch
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-------DFSPKLVDFDSW 512 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-------~~~~kl~DFGla 512 (658)
||.+.|+|.+++... ..++|.-.+.+..|+++-+++||.. +|||+||||+|.||.. ...++|+|||.+
T Consensus 774 ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 774 EYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred eccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 999999999999843 3599999999999999999999999 9999999999999952 346899999988
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
-.+.--.....-.....+-.+-.+|...+..++.++|-|.+..+++-|+.|+.- . .. ......+
T Consensus 849 iDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~------------q-~~---~g~~~~~ 912 (974)
T KOG1166|consen 849 IDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM------------E-VK---NGSSWMV 912 (974)
T ss_pred eeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH------------H-hc---CCcceec
Confidence 665422221111111112223348999999999999999999999999999742 1 00 0011111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+..++.+... +...++...+|+.|-..=|...++...++++...
T Consensus 913 ~~~~~Ry~~~--~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 913 KTNFPRYWKR--DMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred cccchhhhhH--HHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence 2212221111 1133566667775555557888888888876654
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-17 Score=159.78 Aligned_cols=134 Identities=18% Similarity=0.253 Sum_probs=106.1
Q ss_pred cccCCCCeeEEEEEecCCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.||+|+||.||+|.+ ++..+++|....+.... .....+++.+|++++..++|+++.....++...+ ..++|||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD--NKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CCEEEEE
Confidence 489999999999985 56788888865432111 1122356789999999999887665555555544 4589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|+++++|.+++..... .++.+++.+|.++|+. +++|||++|.||+++ ++.++++|||+++.
T Consensus 78 ~~~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND---------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EECCccHHHHHhhcHH---------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999998753211 7899999999999999 999999999999999 78999999998754
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-17 Score=158.13 Aligned_cols=139 Identities=17% Similarity=0.210 Sum_probs=107.4
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccc------------------hhhHHHHHHHHHHHHhccCCC--
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT------------------GYLELYFQREVADLARINHEN-- 419 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~------------------~~~~~~~~~E~~~l~~l~H~n-- 419 (658)
+...+.||+|+||.||++..++|+.+|||.+........ ......+.+|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 334588999999999999998899999998654321100 011224678999999998874
Q ss_pred ccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec
Q 006178 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT 499 (658)
Q Consensus 420 Iv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~ 499 (658)
+++.++. . ..++||||+++++|.+.... .....++.+++.++.++|+. +++||||||+||+++
T Consensus 97 v~~~~~~----~--~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~ 159 (198)
T cd05144 97 VPKPIDW----N--RHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD 159 (198)
T ss_pred CCceeec----C--CceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence 4444432 2 34899999999998765431 33567899999999999998 999999999999999
Q ss_pred CCCCceeccccchhhh
Q 006178 500 EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~ 515 (658)
+++.++|+|||++...
T Consensus 160 ~~~~~~liDfg~~~~~ 175 (198)
T cd05144 160 DDEKIYIIDWPQMVST 175 (198)
T ss_pred CCCcEEEEECCccccC
Confidence 9999999999988654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-17 Score=182.04 Aligned_cols=135 Identities=17% Similarity=0.176 Sum_probs=108.9
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccc----cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.||+|+||.||+|.+.+.. +++|+...+... ......+++.+|++++++++|++++....++.+.. ..++|
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv 414 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE--EKTIV 414 (535)
T ss_pred cceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC--CCEEE
Confidence 478999999999999986554 444443322211 11123356889999999999999998887777655 55899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|||+++++|.+++. ....++.|++++|+|||+. +++|||+||+|||+ +++.++|+|||+++.
T Consensus 415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999998875 3568999999999999999 99999999999999 577899999998764
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.9e-18 Score=174.97 Aligned_cols=174 Identities=17% Similarity=0.226 Sum_probs=127.2
Q ss_pred ceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 434 TRMLVFDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
+.||.|++|...+|.++|.++ .....++...+.++.|++.|++| + +.+|||+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999743 33457888999999999999999 6 8999999999999999999999999987
Q ss_pred hhhhhcC----CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 513 KTILARS----EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 513 ~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
....... .....+...++..||+||.+.+..|+.|+||||+|++|+|+++ =..++. .. ..
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~-----------~t 468 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RI-----------AT 468 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HH-----------Hh
Confidence 6554333 1122344566788999999999999999999999999999998 222221 00 01
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ev 628 (658)
..++-+..+.+......+.-..|+.+++.+.|.+||++.++
T Consensus 469 ~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 469 LTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 11111222211000011123478899999999999954443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.1e-16 Score=173.32 Aligned_cols=200 Identities=17% Similarity=0.155 Sum_probs=135.3
Q ss_pred ccccCCCCeeEEEEEecCCC-eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~-~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.|..|+||.||.++++..+ .+|. ++.++.. +.+- ++.....| +.|
T Consensus 89 klisngAygavylvrh~~trqrfa~-kiNkq~l---------ilRn--ilt~a~np-----------------fvv---- 135 (1205)
T KOG0606|consen 89 KLISNGAYGAVYLVRHKETRQRFAM-KINKQNL---------ILRN--ILTFAGNP-----------------FVV---- 135 (1205)
T ss_pred EeeccCCCCceeeeeccccccchhh-cccccch---------hhhc--cccccCCc-----------------cee----
Confidence 78999999999999998654 4555 4422211 1110 22222222 233
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC---
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS--- 519 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~--- 519 (658)
||-...++.-+. ++.. ++.+++|+|+. +|+|||+||+|.+|+.-|.+|+.|||+++...-..
T Consensus 136 --gDc~tllk~~g~--lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 --GDCATLLKNIGP--LPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred --chhhhhcccCCC--Ccch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 455556654333 3322 27899999999 99999999999999999999999999987643110
Q ss_pred ----------CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-c-HHHHHHHhhcCCcc
Q 006178 520 ----------EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-N-LVDWAKDYLELPEV 587 (658)
Q Consensus 520 ----------~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~-~~~~~~~~~~~~~~ 587 (658)
.........+++.|.|||++..+.|+..+|.|++|+|+||.+.|+.||.++.. . +...+.....-+
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp-- 278 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP-- 278 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc--
Confidence 11112234667889999999999999999999999999999999999976532 1 112222111111
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRP 623 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP 623 (658)
+-....+.+..+++.+.|+.+|..|-
T Consensus 279 ----------E~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 279 ----------EEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ----------ccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 11222345678999999999999994
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=145.37 Aligned_cols=139 Identities=15% Similarity=0.179 Sum_probs=98.8
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhh--------------------HHHHHHHHHHHHhccCCC--c
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL--------------------ELYFQREVADLARINHEN--T 420 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~--------------------~~~~~~E~~~l~~l~H~n--I 420 (658)
.+.||+|+||.||+|...+++.||||.+........... ......|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 367999999999999988889999998754321111000 011245677777775443 4
Q ss_pred cceeeEEecCCCCceEEEEEecCCCChhhh-hccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceee
Q 006178 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEH-LHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYL 498 (658)
Q Consensus 421 v~l~~~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl 498 (658)
.+.+++. ..++||||++++++... +.... .. .+...++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~~------~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDLN------RHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEecC------CCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 4554431 34899999998554321 11110 11 6678999999999999999 7 99999999999999
Q ss_pred cCCCCceeccccchhhh
Q 006178 499 TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~ 515 (658)
+ ++.++|+|||.+...
T Consensus 149 ~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 149 D-DGKVYIIDVPQAVEI 164 (187)
T ss_pred E-CCcEEEEECcccccc
Confidence 9 889999999988653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.2e-17 Score=178.62 Aligned_cols=251 Identities=16% Similarity=0.183 Sum_probs=181.2
Q ss_pred hcccccCCCCeeEEEEEecCC--CeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG--PEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.||+|+|+.|-....... ..+|+|.+.... ......+....|..+-..+. |+|++++++...+.+ ..+++
T Consensus 24 ~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~--~~~~~ 99 (601)
T KOG0590|consen 24 LSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR--SYLLS 99 (601)
T ss_pred ccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCc--ccccc
Confidence 345699999999988876443 344445443332 12223345566888888886 999999999998877 77999
Q ss_pred EEecCCCChhhhh-ccCCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeeccCCCcceeecCCC-Cceeccccchhhh
Q 006178 439 FDYASNGTLYEHL-HYGERCQVSWTRRMKIVIGIARGLKYLH-TELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l-~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~ 515 (658)
+||..+|++.+.+ +... ...+......++.|+..++.|+| .. ++.|||+||+|.+++..+ ..|++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCCc-cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999999988 4332 24677778899999999999999 77 999999999999999999 9999999999877
Q ss_pred hh-cCCCCCCccccc-CccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc---HHHHHHHhhcCCcccc
Q 006178 516 LA-RSEKNPGTLGSQ-GAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN---LVDWAKDYLELPEVMS 589 (658)
Q Consensus 516 ~~-~~~~~~~~~~~~-~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~---~~~~~~~~~~~~~~~~ 589 (658)
.. ...........+ +..|+|||...+. ...+..|+||.|+++.-+++|..|+...... ...|....
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~-------- 247 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK-------- 247 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc--------
Confidence 65 222222223334 6789999999884 4568899999999999999999998643221 11111110
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
................++..+++..+|..|.+.+++...
T Consensus 248 ---~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 248 ---GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ---cccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 000001112223446688889999999999998876543
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-15 Score=146.66 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=107.0
Q ss_pred cccc-CCCCeeEEEEEecCCCeEEEEEEeeecc---------ccchhhHHHHHHHHHHHHhccCCCc--cceeeEEecCC
Q 006178 364 NIIG-SSPDSLVYKGTMKGGPEIAVISLCIKEE---------HWTGYLELYFQREVADLARINHENT--GKLLGYCRESS 431 (658)
Q Consensus 364 ~~lG-~G~~g~Vy~~~~~~~~~vavk~~~~~~~---------~~~~~~~~~~~~E~~~l~~l~H~nI--v~l~~~~~~~~ 431 (658)
..|| .|+.|+||++... +..+++|....+.. .........+.+|++++.++.|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5788 8999999999885 56788887743210 0112334568899999999998875 77777654433
Q ss_pred CC--ceEEEEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 432 PF--TRMLVFDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 432 ~~--~~~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
.. ..++||||+++ .+|.+++... .++.. .+.+++.+|.+||+. ||+||||||+|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence 21 23599999997 6899888643 34543 367899999999999 999999999999999988999999
Q ss_pred ccchhh
Q 006178 509 FDSWKT 514 (658)
Q Consensus 509 FGla~~ 514 (658)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 997654
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-15 Score=136.16 Aligned_cols=133 Identities=17% Similarity=0.121 Sum_probs=109.9
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC--CCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++++++++....+ ..+++|||
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~--~~~~v~e~ 74 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGESDG--WSYLLMEW 74 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--ccEEEEEe
Confidence 578999999999999866 6788887633221 3468899999999976 58999998887665 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
++++++..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988777654 5567788999999999999986444799999999999999989999999997653
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-17 Score=144.79 Aligned_cols=155 Identities=26% Similarity=0.457 Sum_probs=129.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|.||+|.++- +|+.+..|.+|+.|++++|++. .+|.+++.|++|+.|+++-|++. .+|..||.++.|+.|||
T Consensus 33 s~ITrLtLSHNKl~~-vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTV-VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCceee-cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 468889999999975 7888999999999999999988 68888999999999999999998 88999999999999999
Q ss_pred ccccCCC-CChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 150 QSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 150 s~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
++|+++. .+|..|..|+.|+.|+|+.|.|. .+|. ....+++|+.|.+..|.+- ++|
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~---------------------dvg~lt~lqil~lrdndll-~lp 166 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPP---------------------DVGKLTNLQILSLRDNDLL-SLP 166 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcc-cCCh---------------------hhhhhcceeEEeeccCchh-hCc
Confidence 9998874 57888999999999999999987 4443 2556888999999999887 788
Q ss_pred ccCCCC---CCCccCCCccCCCCcc
Q 006178 229 KCLEYL---PSTSFQGNCLQNKDPK 250 (658)
Q Consensus 229 ~~l~~l---~~~~~~~n~~~~~~~~ 250 (658)
..++.+ ..+..+||.++-..|.
T Consensus 167 keig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 167 KEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred HHHHHHHHHHHHhcccceeeecChh
Confidence 877655 4577888877765543
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-13 Score=147.78 Aligned_cols=145 Identities=17% Similarity=0.206 Sum_probs=102.0
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccch------------------------------------hhHHHHHH
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG------------------------------------YLELYFQR 407 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~------------------------------------~~~~~~~~ 407 (658)
+.||+|++|.||+|++++|+.||||.........-. ..+-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 679999999999999999999999997543211000 00113566
Q ss_pred HHHHHHhcc----CCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHH-HHHHhhhcC
Q 006178 408 EVADLARIN----HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR-GLKYLHTEL 482 (658)
Q Consensus 408 E~~~l~~l~----H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~-gL~yLH~~~ 482 (658)
|++.+.++. |.+-+.+-.++.+... ..++||||++|++|.++...... .. .+.+++.++++ .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~- 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTS-ERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRD- 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcC-CceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhC-
Confidence 777666662 3333333333332211 45899999999999987653211 12 24567777766 47888988
Q ss_pred CCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 483 GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 483 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
|++|+|+||.||+++++++++++|||++..+.
T Consensus 277 --g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 --GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred --CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999987653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-14 Score=149.05 Aligned_cols=181 Identities=22% Similarity=0.269 Sum_probs=137.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.++++.|+|.+|.++..-..++..++.|+.||||.|.++...-.+|..-.++++|+|++|.|+..--..|.++.+|..|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 46899999999999988888899999999999999999865555677767899999999999866667788999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCc-----------------------cccccccccCCCCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY-----------------------TANIHGMYASSANLT 205 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~-----------------------~~~l~~~~l~~n~l~ 205 (658)
|++|+++...+..|.+|++|+.|+|..|++. .+-...+.++ ...++.++++.|+++
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 9999999555566777999999999999875 1111000000 123455677777775
Q ss_pred c-----ccCCCCCcEEEccCCcCcccCcccCC---CCCCCccCCCccCCCCcc
Q 006178 206 G-----LCHLSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKDPK 250 (658)
Q Consensus 206 ~-----~~~l~~L~~l~ls~N~l~g~ip~~l~---~l~~~~~~~n~~~~~~~~ 250 (658)
. +.+|++|++|+||+|.+...-++.++ .|..++++.|.++..++.
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~ 335 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEG 335 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChh
Confidence 3 56788888888888888766666654 456678888877776553
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.9e-14 Score=136.01 Aligned_cols=207 Identities=16% Similarity=0.204 Sum_probs=139.9
Q ss_pred HHHHHhccCCCccceeeEEecCC---CCceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 006178 409 VADLARINHENTGKLLGYCRESS---PFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELG 483 (658)
Q Consensus 409 ~~~l~~l~H~nIv~l~~~~~~~~---~~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~ 483 (658)
..-+-++.|.|||+++.|+.+.. ..+..++.|||..|++.++|++.. ...+......+|+-||..||.|||+ |.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 34466678999999999987643 225789999999999999998533 2357788888999999999999999 78
Q ss_pred CCeeeccCCCcceeecCCCCceeccccch--hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHH
Q 006178 484 PPFTISELNSSAVYLTEDFSPKLVDFDSW--KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEII 561 (658)
Q Consensus 484 ~~ivHrDlkp~NILl~~~~~~kl~DFGla--~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ell 561 (658)
|+|+|+++..+-|++..++-+|+.--.-. ...............+.-+.|.+||+-..-..+.++|||+||+..+||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 99999999999999998888887532110 0000000001111222234467799887778888999999999999999
Q ss_pred hCCCCC-CCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 562 SGRPPC-CKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 562 tG~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
.+..-- .....-..+- .. ...+...-++.- .+++.+|++..|..||+|.+++.+.
T Consensus 277 ilEiq~tnseS~~~~ee--~i---a~~i~~len~lq-----------r~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEE--NI---ANVIIGLENGLQ-----------RGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HheeccCCCcceeehhh--hh---hhheeeccCccc-----------cCcCcccccCCCCCCcchhhhhcCc
Confidence 886432 1111110000 00 000111111111 2677899999999999999987653
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-15 Score=133.23 Aligned_cols=139 Identities=27% Similarity=0.420 Sum_probs=124.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCC-CCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~ 148 (658)
..+..|++++|++.. +|.+++.|+.|+.|+++-|++. .+|..|+.++.|++|||++|+++. .+|..|..++.|+.|+
T Consensus 56 ~nlevln~~nnqie~-lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlraly 133 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIEE-LPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALY 133 (264)
T ss_pred hhhhhhhcccchhhh-cChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHH
Confidence 467889999999976 8999999999999999999998 799999999999999999999964 5789999999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
|++|.|. .+|..+++|++|+.|.+..|.+- ++|. .+..++.|+.|++.+|.++ .+|
T Consensus 134 l~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpk---------------------eig~lt~lrelhiqgnrl~-vlp 189 (264)
T KOG0617|consen 134 LGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPK---------------------EIGDLTRLRELHIQGNRLT-VLP 189 (264)
T ss_pred hcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcH---------------------HHHHHHHHHHHhcccceee-ecC
Confidence 9999998 89999999999999999999986 5553 3566788999999999998 778
Q ss_pred ccCCCC
Q 006178 229 KCLEYL 234 (658)
Q Consensus 229 ~~l~~l 234 (658)
..++++
T Consensus 190 pel~~l 195 (264)
T KOG0617|consen 190 PELANL 195 (264)
T ss_pred hhhhhh
Confidence 777765
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=7e-15 Score=151.38 Aligned_cols=163 Identities=23% Similarity=0.258 Sum_probs=118.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.+..|+|+.|+++..-...+.+|+.|+.|+||+|.|....++++.-.++|+.||||+|+++..-+.+|..|..|+.|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 46777888888777666677778888888888888877777777777888888888888875555667777888888888
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCC--CCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
.|+++..--..|-.+++|+.|||++|.+++.|.+.. +.+ ...+..+.+.+|++.. +.++.+|++|||.+|.+
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g-l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG-LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc-chhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 888775555567778888888888888887776632 222 3455666777777653 55677888888888877
Q ss_pred cccCcccCCCC
Q 006178 224 VGSIPKCLEYL 234 (658)
Q Consensus 224 ~g~ip~~l~~l 234 (658)
-..-|..|..+
T Consensus 429 aSIq~nAFe~m 439 (873)
T KOG4194|consen 429 ASIQPNAFEPM 439 (873)
T ss_pred eeecccccccc
Confidence 76667666554
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.2e-15 Score=154.71 Aligned_cols=78 Identities=29% Similarity=0.402 Sum_probs=33.7
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcc-cCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
++.||||+|.|.. .|..+..-.++-.|+||+|+|.. ||.. |-+|+.|-+||||+|++. .+|+.+..|..|++|.|+
T Consensus 105 Lt~lDLShNqL~E-vP~~LE~AKn~iVLNLS~N~Iet-IPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls 181 (1255)
T KOG0444|consen 105 LTILDLSHNQLRE-VPTNLEYAKNSIVLNLSYNNIET-IPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLS 181 (1255)
T ss_pred ceeeecchhhhhh-cchhhhhhcCcEEEEcccCcccc-CCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcC
Confidence 4444444444443 34444444444444444444442 2222 334444444444444443 344444444444444444
Q ss_pred cc
Q 006178 151 SN 152 (658)
Q Consensus 151 ~N 152 (658)
+|
T Consensus 182 ~N 183 (1255)
T KOG0444|consen 182 NN 183 (1255)
T ss_pred CC
Confidence 44
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.7e-13 Score=148.48 Aligned_cols=91 Identities=37% Similarity=0.710 Sum_probs=84.0
Q ss_pred CCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCC
Q 006178 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (658)
Q Consensus 95 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 174 (658)
.++.|+|++|.+.|.+|..++.|++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|..+++|++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCC
Q 006178 175 RNRLQGAVPAG 185 (658)
Q Consensus 175 ~N~l~g~~p~~ 185 (658)
+|+|+|.+|..
T Consensus 499 ~N~l~g~iP~~ 509 (623)
T PLN03150 499 GNSLSGRVPAA 509 (623)
T ss_pred CCcccccCChH
Confidence 99999998863
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.1e-14 Score=148.81 Aligned_cols=107 Identities=30% Similarity=0.399 Sum_probs=91.2
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccc-ccCCccccee
Q 006178 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKI 147 (658)
Q Consensus 70 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L 147 (658)
+++.++.+..|+|. .-+|+.+..|..|+.||||+|++. ..|..+.+-+++-+|+||+|+|. .||.. |-+|+.|-+|
T Consensus 78 p~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfL 155 (1255)
T KOG0444|consen 78 PRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFL 155 (1255)
T ss_pred hhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhh
Confidence 45667778888885 348889999999999999999998 68888888899999999999998 67755 5688999999
Q ss_pred ecccccCCCCChhhhcCCCCCCEEeCCCCCCc
Q 006178 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
|||+|++. .+|+.+..|..|++|+|++|.|.
T Consensus 156 DLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 156 DLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred ccccchhh-hcCHHHHHHhhhhhhhcCCChhh
Confidence 99999998 78889999999999999999764
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.9e-13 Score=141.29 Aligned_cols=254 Identities=17% Similarity=0.096 Sum_probs=176.9
Q ss_pred HHHHHhhhcccccC--CCCeeEEEEEe--c-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEe
Q 006178 355 LEVACEDFSNIIGS--SPDSLVYKGTM--K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCR 428 (658)
Q Consensus 355 l~~~~~~f~~~lG~--G~~g~Vy~~~~--~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~ 428 (658)
....+..+.+.+|. |.+|.||.+.. . ++..+|+|+-...... ......=.+|+....++ .|+|.++.+..+.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~--p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSP--PLDSKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCC--ccccccccchhhcccccCccccccccCcccc
Confidence 33344455678999 99999999987 3 5778888874333221 11122234677777777 5999999888888
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHhhhcCCCCeeeccCCCcceeecCC-CC
Q 006178 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR----GLKYLHTELGPPFTISELNSSAVYLTED-FS 503 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~----gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~ 503 (658)
..+ ..++-+|++. .+|.++.+.... .++....+.+..+..+ ||.++|.. +++|-|+||+||+...+ ..
T Consensus 189 ~~~--~lfiqtE~~~-~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 189 GSG--ILFIQTELCG-ESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred cCC--cceeeecccc-chhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccce
Confidence 887 7799999995 689888875432 4677778888888888 99999999 99999999999999999 88
Q ss_pred ceeccccchhhhhhcCCCCCC---cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHH
Q 006178 504 PKLVDFDSWKTILARSEKNPG---TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD 580 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~ 580 (658)
.+++|||+...+......... ....++..|++||... +.++.++||||+|.+..|..++..+..... ...|...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~--~~~W~~~ 338 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGK--NSSWSQL 338 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCC--CCCcccc
Confidence 999999998776543321111 1124567899999865 568899999999999999999876643221 0112110
Q ss_pred hhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 581 YLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
+....-.+.. ......+...+..|++.+|..|++.+.+..
T Consensus 339 --r~~~ip~e~~--------~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 339 --RQGYIPLEFC--------EGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --ccccCchhhh--------cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0000001111 111223445788899999999998876654
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.1e-12 Score=139.50 Aligned_cols=142 Identities=12% Similarity=0.093 Sum_probs=92.3
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeecccc---------------------------c---hhhH------HHHH
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHW---------------------------T---GYLE------LYFQ 406 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~---------------------------~---~~~~------~~~~ 406 (658)
+.||+|++|.||+|++++ |+.||||...+..... . .... -+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 679999999999999987 9999999986542110 0 0111 1245
Q ss_pred HHHHHHHhcc----CCCccceeeEEecCCCCceEEEEEecCCCChhhhh--ccCCC--CCCCHHHHHHHHHHHHHHHHHh
Q 006178 407 REVADLARIN----HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL--HYGER--CQVSWTRRMKIVIGIARGLKYL 478 (658)
Q Consensus 407 ~E~~~l~~l~----H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l--~~~~~--~~l~~~~~~~i~~qia~gL~yL 478 (658)
+|+..+.++. +.+.+.+-.++.+-.. ..+|||||++|+.+.++- ...+. ..+.......++.|+
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st-~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi------- 276 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCS-ETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV------- 276 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCC-CceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------
Confidence 5655555552 4444444444433211 458999999999998752 22110 112222333334443
Q ss_pred hhcCCCCeeeccCCCcceeecCCC----Cceeccccchhhhh
Q 006178 479 HTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSWKTIL 516 (658)
Q Consensus 479 H~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~~~~ 516 (658)
+.. |++|+|+||.||+++.++ .+++.|||++..+.
T Consensus 277 f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 346 999999999999999888 89999999987654
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.3e-12 Score=117.93 Aligned_cols=129 Identities=16% Similarity=0.088 Sum_probs=93.3
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCc-cceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.|+.|.++.||+++.. ++.+++|....... ....+.+|+.+++.+.+.++ .+++.+.. . ..++||||+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~--~~~lv~e~i 73 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFDP--E--TGVLITEFI 73 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEeC--C--CCeEEEEec
Confidence 46889999999999876 66788887533221 12246789999999865554 45555432 2 237999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
++.++.+.- .....++.+++++|+.||+.. ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 74 ~G~~l~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 74 EGSELLTED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCCcccccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 998776430 112345789999999999982 12369999999999999 6689999999764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.5e-14 Score=138.88 Aligned_cols=166 Identities=29% Similarity=0.427 Sum_probs=129.4
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
+..++..+|+++. +|+.++++..|..|++.+|++....|.. -+++.|+.||..+|-+. .+|++++.|.+|..|+|..
T Consensus 139 l~dl~~~~N~i~s-lp~~~~~~~~l~~l~~~~n~l~~l~~~~-i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 139 LEDLDATNNQISS-LPEDMVNLSKLSKLDLEGNKLKALPENH-IAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhhcccccccc-CchHHHHHHHHHHhhccccchhhCCHHH-HHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhh
Confidence 5567777888765 6788888888888999999888544444 44888899999888886 8888899999999999999
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~i 227 (658)
|++. .+| +|.+++.|.+|+++.|++. .+|...... ...+..+++..|.+.. ++-+.+|+.||+|+|.++ .+
T Consensus 216 Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~-L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is-~L 290 (565)
T KOG0472|consen 216 NKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKH-LNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDIS-SL 290 (565)
T ss_pred cccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcc-cccceeeeccccccccCchHHHHhhhhhhhcccCCccc-cC
Confidence 9888 677 7888888888888888887 666643321 2355667788888764 677899999999999999 67
Q ss_pred cccCCCC--CCCccCCCccC
Q 006178 228 PKCLEYL--PSTSFQGNCLQ 245 (658)
Q Consensus 228 p~~l~~l--~~~~~~~n~~~ 245 (658)
|.+++++ ..+.+.||.+.
T Consensus 291 p~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 291 PYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred CcccccceeeehhhcCCchH
Confidence 8888876 45677788554
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-14 Score=138.88 Aligned_cols=167 Identities=28% Similarity=0.384 Sum_probs=99.7
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.++.++|.+.. +|++++.+..|..|+..+|+++ ..|..+.++.+|..|++.+|.+. .+|+..-+++.|++||+..|-
T Consensus 118 ~l~~s~n~~~e-l~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 118 KLDCSSNELKE-LPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNL 194 (565)
T ss_pred hhhccccceee-cCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhh
Confidence 33344444432 3344444444444444444444 34444444444444444444444 233333335555666666665
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccCc
Q 006178 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip 228 (658)
++ .+|+.++.|.+|+.|+|..|++. .+|..... ..+..++++.|++.- +.++.+|.+|||.+|++. ++|
T Consensus 195 L~-tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gc---s~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~P 268 (565)
T KOG0472|consen 195 LE-TLPPELGGLESLELLYLRRNKIR-FLPEFPGC---SLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVP 268 (565)
T ss_pred hh-cCChhhcchhhhHHHHhhhcccc-cCCCCCcc---HHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCc
Confidence 55 67777777777777777777776 55542221 245566777777754 347899999999999998 889
Q ss_pred ccC---CCCCCCccCCCccCCCCc
Q 006178 229 KCL---EYLPSTSFQGNCLQNKDP 249 (658)
Q Consensus 229 ~~l---~~l~~~~~~~n~~~~~~~ 249 (658)
+.+ .++..+++++|-+++..+
T Consensus 269 de~clLrsL~rLDlSNN~is~Lp~ 292 (565)
T KOG0472|consen 269 DEICLLRSLERLDLSNNDISSLPY 292 (565)
T ss_pred hHHHHhhhhhhhcccCCccccCCc
Confidence 864 567788999997776543
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=136.83 Aligned_cols=152 Identities=30% Similarity=0.342 Sum_probs=82.4
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.|+|++|+|+. +|. .+++|++|+|++|+|+. +|.. .++|+.|+|++|.|+ .+|.. .++|+.|+|++
T Consensus 224 L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~ 291 (788)
T PRK15387 224 ITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWIFG 291 (788)
T ss_pred CCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhc---hhhcCEEECcC
Confidence 4444455554443 222 13445555555555552 3321 234445555555544 33331 23456666667
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCC-CCCcEEEccCCcCcccCccc
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL-SQLKVADFSYNFFVGSIPKC 230 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l-~~L~~l~ls~N~l~g~ip~~ 230 (658)
|+++ .+|.. +++|+.|+|++|+|++ +|.. ...+..+++++|.++++..+ .+|+.|+|++|+|+ .+|..
T Consensus 292 N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l-----p~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~LP~l 360 (788)
T PRK15387 292 NQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL-----PSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-SLPTL 360 (788)
T ss_pred Cccc-ccccc---ccccceeECCCCcccc-CCCC-----cccccccccccCccccccccccccceEecCCCccC-CCCCC
Confidence 7666 35542 3678888888888874 4431 12344566666766665544 35777777777777 35555
Q ss_pred CCCCCCCccCCCccCC
Q 006178 231 LEYLPSTSFQGNCLQN 246 (658)
Q Consensus 231 l~~l~~~~~~~n~~~~ 246 (658)
..++..+.+++|.+..
T Consensus 361 p~~L~~L~Ls~N~L~~ 376 (788)
T PRK15387 361 PSELYKLWAYNNRLTS 376 (788)
T ss_pred Ccccceehhhcccccc
Confidence 5555556666665544
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=138.63 Aligned_cols=76 Identities=25% Similarity=0.375 Sum_probs=36.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+.+.|+|++++++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 35566666666654 444332 34555555555555 2443332 34555555555554 3443332 234444444
Q ss_pred cccCC
Q 006178 151 SNGLT 155 (658)
Q Consensus 151 ~N~l~ 155 (658)
+|.++
T Consensus 250 ~N~L~ 254 (754)
T PRK15370 250 INRIT 254 (754)
T ss_pred CCccC
Confidence 44444
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.2e-11 Score=110.09 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=97.9
Q ss_pred ccccCCCCeeEEEEEecC-------CCeEEEEEEeeeccc---c------c---------hhhHHHHH----HHHHHHHh
Q 006178 364 NIIGSSPDSLVYKGTMKG-------GPEIAVISLCIKEEH---W------T---------GYLELYFQ----REVADLAR 414 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-------~~~vavk~~~~~~~~---~------~---------~~~~~~~~----~E~~~l~~ 414 (658)
..||.|--+.||.|...+ +..+|+|........ . + ....+.+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 478999876432100 0 0 01122333 89999999
Q ss_pred cc--CCCccceeeEEecCCCCceEEEEEecCCCChhh-hhccCCCCCCCHHHHHHHHHHHHHHHHHh-hhcCCCCeeecc
Q 006178 415 IN--HENTGKLLGYCRESSPFTRMLVFDYASNGTLYE-HLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISE 490 (658)
Q Consensus 415 l~--H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~ivHrD 490 (658)
+. .-++.+.+++ . ..++||||+.+..+.. .++. ..++..+...+..+++.+|.+| |+. ++||+|
T Consensus 83 l~~~Gv~vP~pi~~--~----~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL--K----KHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe--c----CCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 94 3567777765 2 3389999997644422 2221 1245566778889999999999 777 999999
Q ss_pred CCCcceeecCCCCceeccccchhh
Q 006178 491 LNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 491 lkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|++.||+++ ++.++|+|||.|..
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCcee
Confidence 999999997 46799999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.6e-12 Score=140.26 Aligned_cols=159 Identities=24% Similarity=0.363 Sum_probs=106.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|+|+. +|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|
T Consensus 220 ~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~L 290 (754)
T PRK15370 220 GNIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSV 290 (754)
T ss_pred cCCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEEC
Confidence 367889999999885 565443 47888999998887 5776654 47888888888888 5777664 47888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccC--CCCCcEEEccCCcCcccC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH--LSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~--l~~L~~l~ls~N~l~g~i 227 (658)
++|+|+ .+|..+. ++|+.|++++|++++ +|... ..++..++++.|.++.+.. .++|+.|++++|+|+ .+
T Consensus 291 s~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l----~~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~L~-~L 361 (754)
T PRK15370 291 YDNSIR-TLPAHLP--SGITHLNVQSNSLTA-LPETL----PPGLKTLEAGENALTSLPASLPPELQVLDVSKNQIT-VL 361 (754)
T ss_pred CCCccc-cCcccch--hhHHHHHhcCCcccc-CCccc----cccceeccccCCccccCChhhcCcccEEECCCCCCC-cC
Confidence 888888 4665443 367777777777773 44322 1345556666666655432 246677777777666 34
Q ss_pred cccC-CCCCCCccCCCccCC
Q 006178 228 PKCL-EYLPSTSFQGNCLQN 246 (658)
Q Consensus 228 p~~l-~~l~~~~~~~n~~~~ 246 (658)
|..+ ..|..+++++|.+..
T Consensus 362 P~~lp~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 362 PETLPPTITTLDVSRNALTN 381 (754)
T ss_pred ChhhcCCcCEEECCCCcCCC
Confidence 4433 345556666665554
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.6e-11 Score=135.70 Aligned_cols=156 Identities=29% Similarity=0.330 Sum_probs=78.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccC-----------------CCCCCCEEEccCCcCCC
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-----------------LLKRLKILDLGTNQLTG 132 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~-----------------~l~~L~~L~Ls~N~l~g 132 (658)
..++.|+|++|+|+. +|.. .++|+.|+|++|.+.. +|..+. .+++|+.|+|++|+|++
T Consensus 242 ~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~-Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~~ 316 (788)
T PRK15387 242 PELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTH-LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLAS 316 (788)
T ss_pred CCCcEEEecCCccCc-ccCc---ccccceeeccCCchhh-hhhchhhcCEEECcCCccccccccccccceeECCCCcccc
Confidence 468899999999986 4532 3455666666665552 332111 12455566666665553
Q ss_pred CCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCC-C
Q 006178 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL-S 211 (658)
Q Consensus 133 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l-~ 211 (658)
+|... .+|+.|++++|+|+ .+|.. ..+|++|+|++|+|++ +|... .++..+++++|.++.+..+ .
T Consensus 317 -Lp~lp---~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls~-LP~lp-----~~L~~L~Ls~N~L~~LP~l~~ 382 (788)
T PRK15387 317 -LPALP---SELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLAS-LPTLP-----SELYKLWAYNNRLTSLPALPS 382 (788)
T ss_pred -CCCCc---ccccccccccCccc-ccccc---ccccceEecCCCccCC-CCCCC-----cccceehhhccccccCccccc
Confidence 33311 23444444444444 23321 1367777777777773 44321 2333344444544443321 2
Q ss_pred CCcEEEccCCcCcccCcccCCCCCCCccCCCccC
Q 006178 212 QLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245 (658)
Q Consensus 212 ~L~~l~ls~N~l~g~ip~~l~~l~~~~~~~n~~~ 245 (658)
+|+.|++++|+|+ .+|....++..+++++|.+.
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l~s~L~~LdLS~N~Ls 415 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVLPSELKELMVSGNRLT 415 (788)
T ss_pred ccceEEecCCccc-CCCCcccCCCEEEccCCcCC
Confidence 4555555555555 24444444444555555444
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.9e-11 Score=125.55 Aligned_cols=236 Identities=14% Similarity=0.094 Sum_probs=148.6
Q ss_pred ecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCC
Q 006178 379 MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ 458 (658)
Q Consensus 379 ~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~ 458 (658)
..++.++.|........ .......+-++.|+.++||||+++++.++..+ ..|||+|-+. .|..++++
T Consensus 34 k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~--~~ylvTErV~--Pl~~~lk~----- 100 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG--TLYLVTERVR--PLETVLKE----- 100 (690)
T ss_pred eccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhhcccC--ceEEEeeccc--cHHHHHHH-----
Confidence 34677888877644332 12234667888999999999999999998887 7899999984 67777764
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcc
Q 006178 459 VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS 538 (658)
Q Consensus 459 l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~ 538 (658)
+......-.+.||+.||.|||+.| +++|++|.-+-|++++.|+.||++|.++................ -.|..|+.
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~--~s~~~P~~ 176 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLI--ESFDDPEE 176 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhh--hcccChhh
Confidence 345667778899999999999776 99999999999999999999999998765432222100000000 11233544
Q ss_pred cccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCC
Q 006178 539 LEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPD 618 (658)
Q Consensus 539 ~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 618 (658)
+.... -..|.|-||++++|++.|..+-..+- ......+..........+...+..-+. ..+++..|...-
T Consensus 177 ~~~s~--~s~D~~~Lg~li~el~ng~~~~~~~~-------~~~~~ipk~~~~~~~k~~~~~~~~r~n-~~~~~~~~~~~~ 246 (690)
T KOG1243|consen 177 IDPSE--WSIDSWGLGCLIEELFNGSLLTKTDL-------SNTGKIPKALIELYCKKLGATELKRPN-KLRFILECRLLG 246 (690)
T ss_pred cCccc--cchhhhhHHHHHHHHhCcccCcchhh-------hccCccchhHHHHHHHHhccccccccc-hhhHHHHHHhcc
Confidence 32221 34699999999999999943311100 000000000000000000000000011 446677777777
Q ss_pred CCCCCCHHHHHHHHhhccCCCch
Q 006178 619 ITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 619 P~~RPs~~evl~~L~~~~~~~~~ 641 (658)
+--|=.+-+++..|+++.-...+
T Consensus 247 gff~n~fvd~~~fLeel~lks~~ 269 (690)
T KOG1243|consen 247 GFFRNDFVDTLLFLEELRLKSVE 269 (690)
T ss_pred ccccchHHHHHHHHHhcccCcHH
Confidence 77777788888888776654443
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.5e-11 Score=129.47 Aligned_cols=247 Identities=19% Similarity=0.192 Sum_probs=168.3
Q ss_pred HHhhhc--ccccCCCCeeEEEEEec--CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 358 ACEDFS--NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 358 ~~~~f~--~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
.+.+|. ..||.|.|+.||+...+ ++..+++|.+...... ......-..|+-+...+ .|.++++++..+....
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~--~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r- 339 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT--FASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR- 339 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc--hHhhhcchhhhhHhhHhhcccccCCCCCCccccc-
Confidence 334454 78999999999998754 5677888876543322 11122234566666666 6888888887776655
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccc
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDS 511 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl 511 (658)
..|+--|||.++++...+.- ...+....++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||+
T Consensus 340 -~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 340 -QGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred -cccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 45799999999988766532 22478888999999999999999998 99999999999999886 7889999998
Q ss_pred hhhhhhcCCCCCCcccccCcccc--CCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 512 WKTILARSEKNPGTLGSQGAICI--LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~--aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
+..+.-. ..... ...+++ +++......+..+.|+||||..+.|.+++..--.. ..+|.
T Consensus 414 ~t~~~~~----~~~~~-~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~----~~~~~----------- 473 (524)
T KOG0601|consen 414 WTRLAFS----SGVFH-HIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES----GVQSL----------- 473 (524)
T ss_pred cccccee----ccccc-ccccccccchhhccccccccccccccccccccccccCcccCcc----cccce-----------
Confidence 7642111 11111 122334 34444556778899999999999999998753211 11111
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.+........+. ....+..+...+...++..||.+.+.....+.
T Consensus 474 ~i~~~~~p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 474 TIRSGDTPNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred eeecccccCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 111111111111 22556678888999999999999887665544
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-10 Score=103.90 Aligned_cols=134 Identities=17% Similarity=0.204 Sum_probs=97.3
Q ss_pred cccCCCCeeEEEEEecCCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+++|+-+.+|.+.+.+. ++++|.-..|.-.. ..-..++..+|+.++.+++--.|.-.+=|..+++ ...|+||
T Consensus 3 ~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--NGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCEEEEE
Confidence 578999999999977543 45555444433211 1122356788999999986544433333444444 4589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|++|-.|.+.+... +..++..+-.-+.-||.. +|+|+||.++||++..+. +.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99998888888744 256777777888889999 999999999999998764 99999998763
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.8e-12 Score=123.76 Aligned_cols=114 Identities=25% Similarity=0.302 Sum_probs=99.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEc-cCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL-GTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L-s~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...+.|+|..|.|+...|..|+.+.+|+.||||+|+|+.+-|++|.+|++|..|-+ ++|+|+...-..|++|.+|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 46789999999999988889999999999999999999999999999999887755 55999954446789999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
+.-|++.-...+.|..|++|..|.+..|.+. .++.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~ 181 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICK 181 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhh-hhcc
Confidence 9999999777788899999999999999886 4444
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-10 Score=101.12 Aligned_cols=145 Identities=14% Similarity=0.118 Sum_probs=103.4
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccc----cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
..|-+|+-+.|+++.+.+ +..++|.-..+... ......++..+|+++|.++.--.|.-..=++.+.. .-.|+|
T Consensus 13 ~likQGAEArv~~~~~~G-e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--~~~i~M 89 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFSG-EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--GGQIYM 89 (229)
T ss_pred eeeeccceeeEeeeccCC-ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC--CCeEEE
Confidence 578899999999999854 55566654444311 12233467889999999986444443333454444 338999
Q ss_pred EecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceeccccchhh
Q 006178 440 DYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~ 514 (658)
||+++ .++.+++...............++.+|-+.+.-||.. +|+|+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 3788888754332333333478899999999999999 999999999999997665 358999998643
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.4e-10 Score=109.85 Aligned_cols=144 Identities=17% Similarity=0.148 Sum_probs=109.0
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC--CCccceeeEEecCC-CCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESS-PFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~-~~~~~lv~E 440 (658)
+.|+.|.++.||++...+|..+++|........ .....+.+|+++++.+.+ .++.+++.+..... ....++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 468999999999999877778888876432211 123467899999999965 44677777765532 013589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------------------------------------- 482 (658)
|+++.++.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999888876542 24788888899999999999998521
Q ss_pred ---------------CCCeeeccCCCcceeecC--CCCceeccccchh
Q 006178 483 ---------------GPPFTISELNSSAVYLTE--DFSPKLVDFDSWK 513 (658)
Q Consensus 483 ---------------~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~ 513 (658)
...++|+|++|.||+++. ++.+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 246799999999999998 5668999998654
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.2e-10 Score=133.26 Aligned_cols=110 Identities=26% Similarity=0.347 Sum_probs=64.1
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+|++|.+.. ++..+..+++|+.|+|++|+..+.+|. ++.+++|+.|+|++|.....+|..++++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 45556666666543 455556666666666666554445553 5666666666666655445666666666666666666
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
+|...+.+|..+ ++++|+.|+|++|...+.+|
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p 721 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFP 721 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCccccc
Confidence 654444555544 55666666666654444444
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.05 E-value=8e-10 Score=132.89 Aligned_cols=116 Identities=23% Similarity=0.387 Sum_probs=85.9
Q ss_pred ccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc
Q 006178 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG 139 (658)
Q Consensus 60 w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 139 (658)
|.|+.+ ..+++.|+|+++...+.+| .++.+++|+.|+|++|.....+|..+.++++|+.|++++|..-+.+|..+
T Consensus 627 ~~~~~~---l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 627 WDGVHS---LTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred cccccc---CCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 666543 3478889998876656666 48888999999999887767888889999999999998875555788766
Q ss_pred CCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
++++|+.|+|++|...+.+|.. .++|+.|+|++|.+. .+|.
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~ 742 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPS 742 (1153)
T ss_pred CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccc
Confidence 6888888888887666566643 356777777777765 4453
|
syringae 6; Provisional |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.1e-12 Score=130.52 Aligned_cols=164 Identities=29% Similarity=0.451 Sum_probs=96.9
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
.+..||+.|.+.. +|.++..+..|+.|.|++|.+. .+|..+++|..|++|||+.|+++ .+|..+..|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~e-lp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFSE-LPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhcccccccc-CchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 3456777777754 5666666666666666666666 56666666666777777777666 5666666554 66666666
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~i 227 (658)
|+++ .+|+.++.+..|..||.+.|.+. .+|+... ....+..+++..|++.. ++.| .|..||+|.|+++ .|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~--~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG--YLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKIS-YL 226 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhh--hHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCcee-ec
Confidence 6666 56666666666666666666665 3343211 11233334444444332 2322 3566777777766 66
Q ss_pred cccCCCCCC---CccCCCccC
Q 006178 228 PKCLEYLPS---TSFQGNCLQ 245 (658)
Q Consensus 228 p~~l~~l~~---~~~~~n~~~ 245 (658)
|-+|.+|.. +.+.+|.++
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred chhhhhhhhheeeeeccCCCC
Confidence 766655543 345556444
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.4e-11 Score=132.24 Aligned_cols=171 Identities=29% Similarity=0.389 Sum_probs=131.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+.++|.++...+ -..-.+|+++++++|++++ +|.+++.+.+|+.|+..+|+|+ .+|..+..+++|+.|.+
T Consensus 219 ~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeecc--ccccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 456677777777763222 2334679999999999995 6799999999999999999997 89999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCc------------------------cccccccccCCCCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY------------------------TANIHGMYASSANLT 205 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~------------------------~~~l~~~~l~~n~l~ 205 (658)
..|.++ .+|+....++.|++|+|..|+|. .+|+...... ...+..+++.+|.++
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccc
Confidence 999998 78888888999999999999996 5565211100 012334566667665
Q ss_pred c-----ccCCCCCcEEEccCCcCcccCccc----CCCCCCCccCCCccCCC
Q 006178 206 G-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 206 ~-----~~~l~~L~~l~ls~N~l~g~ip~~----l~~l~~~~~~~n~~~~~ 247 (658)
. +.+..+|++|+|++|++. .+|+. ++.|+.+.++||.++..
T Consensus 373 d~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~~L 422 (1081)
T KOG0618|consen 373 DSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLTTL 422 (1081)
T ss_pred ccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhhhh
Confidence 4 567789999999999997 67753 45567789999977654
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.4e-11 Score=123.39 Aligned_cols=178 Identities=26% Similarity=0.280 Sum_probs=113.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCC---CcEEeccCCcccc----cCCcccCCC-CCCCEEEccCCcCCCC----Ccc
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTY---LQELILHGNNLIG----IIPKELGLL-KRLKILDLGTNQLTGP----IPP 136 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~---L~~L~L~~N~l~g----~~p~~~~~l-~~L~~L~Ls~N~l~g~----~p~ 136 (658)
..+++.|+|++|.+.+..+..+..+.. |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 347888888888887766666666555 8888888888873 233455566 7888888888888743 234
Q ss_pred cccCCcccceeecccccCCCC----ChhhhcCCCCCCEEeCCCCCCcccCCCCC--CCCccccccccccCCCCccc----
Q 006178 137 EIGNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASSANLTG---- 206 (658)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~~~~~l~~~~l~~n~l~~---- 206 (658)
.+..+.+|+.|+|++|.+++. ++..+..+++|++|+|++|.+++.-.... .......+..+++++|.++.
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 456677888888888888742 34455666788888888888763321100 00111345666777766653
Q ss_pred -cc-----CCCCCcEEEccCCcCc--c--cCccc---CCCCCCCccCCCccCC
Q 006178 207 -LC-----HLSQLKVADFSYNFFV--G--SIPKC---LEYLPSTSFQGNCLQN 246 (658)
Q Consensus 207 -~~-----~l~~L~~l~ls~N~l~--g--~ip~~---l~~l~~~~~~~n~~~~ 246 (658)
+. ...+|+.|++++|.++ | .++.. +.++..+++++|.+..
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 11 1357777777777775 1 12222 2345556666665443
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.4e-11 Score=122.34 Aligned_cols=176 Identities=25% Similarity=0.172 Sum_probs=112.3
Q ss_pred CCEEEEEecCCCCcc------cCCccccCCCCCcEEeccCCcccccCCcccCCCCC---CCEEEccCCcCCC----CCcc
Q 006178 70 DRVLKINISGSSLKG------FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR---LKILDLGTNQLTG----PIPP 136 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g------~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~---L~~L~Ls~N~l~g----~~p~ 136 (658)
..++.|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+.+ |+.|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 347788888877762 23455677888888888888887666665655555 8888888888873 2334
Q ss_pred cccCC-cccceeecccccCCCC----ChhhhcCCCCCCEEeCCCCCCcccCCCCCC--CCccccccccccCCCCccc---
Q 006178 137 EIGNL-TGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSN--SGYTANIHGMYASSANLTG--- 206 (658)
Q Consensus 137 ~~~~l-~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~~~~~l~~~~l~~n~l~~--- 206 (658)
.+..+ ++|+.|+|++|.+++. ++..+..+++|++|++++|.+++....... .....++..++++.|.+++
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 210 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA 210 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH
Confidence 45566 7888888888888843 344566777888888888888742110000 0001356666777776542
Q ss_pred ------ccCCCCCcEEEccCCcCcccCc----cc----CCCCCCCccCCCccC
Q 006178 207 ------LCHLSQLKVADFSYNFFVGSIP----KC----LEYLPSTSFQGNCLQ 245 (658)
Q Consensus 207 ------~~~l~~L~~l~ls~N~l~g~ip----~~----l~~l~~~~~~~n~~~ 245 (658)
+..+++|++|++++|.+++..+ .. ...|..+.+.+|.+.
T Consensus 211 ~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 211 SALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 3356677888888877764211 11 135556666666443
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.2e-10 Score=102.44 Aligned_cols=110 Identities=32% Similarity=0.482 Sum_probs=37.6
Q ss_pred ccCCCCCcEEeccCCcccccCCcccC-CCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhh-cCCCC
Q 006178 90 LGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLIS 167 (658)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~ 167 (658)
+.+...++.|+|++|.|+. + +.++ .+.+|+.||||+|.++ .++ .+..++.|+.|++++|+++ .+++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 4555677888888888874 3 2455 5778888888888887 443 5777888888888888888 454444 46888
Q ss_pred CCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCc
Q 006178 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 168 L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~ 224 (658)
|++|+|++|++.. +- .+..+..+++|++|++.+|.++
T Consensus 90 L~~L~L~~N~I~~-l~-------------------~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISD-LN-------------------ELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---S-CC-------------------CCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCC-hH-------------------HhHHHHcCCCcceeeccCCccc
Confidence 8888888888862 11 1234556788888888888776
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.1e-11 Score=130.51 Aligned_cols=105 Identities=31% Similarity=0.403 Sum_probs=71.1
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCc-ccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.++.|.|.+|.|+...-+.+-++.+|+.|+|++|+|. .+|+ .+.++..|+.|+||+|.|+ .+|..+.++..|++|..
T Consensus 360 ~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 3556666777776666666667777777777777766 3443 3566677777777777776 66777777777777777
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
.+|++. .+| .+..++.|+.+|+|.|+|+
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhh
Confidence 777776 566 6667777777777777665
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.7e-11 Score=124.28 Aligned_cols=149 Identities=28% Similarity=0.390 Sum_probs=122.6
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
|..+.|..|.+. .+|..+++|..|++|||+.|+++ .+|..++.|+ |++|-+++|+++ .+|+.++.+..|..||.+.
T Consensus 100 Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ 175 (722)
T KOG0532|consen 100 LESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSK 175 (722)
T ss_pred HHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhh
Confidence 445666677665 48888999999999999999988 6888888874 899999999997 8899999889999999999
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~i 227 (658)
|.+. .+|..++++.+|+.|.+..|++. .+|..... ..+..++++.|+++. |.+|+.|++|-|.+|.|. +.
T Consensus 176 nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~---LpLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq-SP 249 (722)
T KOG0532|consen 176 NEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS---LPLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ-SP 249 (722)
T ss_pred hhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC---CceeeeecccCceeecchhhhhhhhheeeeeccCCCC-CC
Confidence 9998 78899999999999999999987 55554332 456678889998875 678999999999999998 44
Q ss_pred ccc
Q 006178 228 PKC 230 (658)
Q Consensus 228 p~~ 230 (658)
|..
T Consensus 250 PAq 252 (722)
T KOG0532|consen 250 PAQ 252 (722)
T ss_pred hHH
Confidence 543
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.95 E-value=5e-09 Score=98.13 Aligned_cols=128 Identities=16% Similarity=0.247 Sum_probs=84.0
Q ss_pred eEEEEEecCCCeEEEEEEeeeccc----------------------cchhhHHHHHHHHHHHHhccCC--CccceeeEEe
Q 006178 373 LVYKGTMKGGPEIAVISLCIKEEH----------------------WTGYLELYFQREVADLARINHE--NTGKLLGYCR 428 (658)
Q Consensus 373 ~Vy~~~~~~~~~vavk~~~~~~~~----------------------~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~ 428 (658)
.||.|...+|..+|+|........ +.........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999999999999986543110 1112234578899999999655 577777553
Q ss_pred cCCCCceEEEEEecC--CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHh-hhcCCCCeeeccCCCcceeecCCCCce
Q 006178 429 ESSPFTRMLVFDYAS--NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL-HTELGPPFTISELNSSAVYLTEDFSPK 505 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~ivHrDlkp~NILl~~~~~~k 505 (658)
. -+|||||++ +..+..+.. .. ++......++.+++..+..+ |.. +|+|+|+.+.||+++++ .+.
T Consensus 80 -~----~~ivME~I~~~G~~~~~l~~-~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 -R----NVIVMEYIGEDGVPLPRLKD-VD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp -T----TEEEEE--EETTEEGGCHHH-CG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred -C----CEEEEEecCCCccchhhHHh-cc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 2 279999998 544544332 21 22345667888888866664 677 99999999999999988 899
Q ss_pred eccccchhh
Q 006178 506 LVDFDSWKT 514 (658)
Q Consensus 506 l~DFGla~~ 514 (658)
|+|||.+..
T Consensus 147 iIDf~qav~ 155 (188)
T PF01163_consen 147 IIDFGQAVD 155 (188)
T ss_dssp E--GTTEEE
T ss_pred EEecCccee
Confidence 999997653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.4e-08 Score=100.93 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=100.7
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccc--cc-----hhhHHHHHHHHHHHHhccCCC--ccceeeEEecCC---
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--WT-----GYLELYFQREVADLARINHEN--TGKLLGYCRESS--- 431 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~--~~-----~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~--- 431 (658)
+.+-.-....|++... +|+.++||........ .. ......+.+|...+.++...+ +++.+++.....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444444445777766 5678999976332210 00 011124779999998884333 445566654321
Q ss_pred CCceEEEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-------CCC
Q 006178 432 PFTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-------DFS 503 (658)
Q Consensus 432 ~~~~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-------~~~ 503 (658)
....++|||++++. +|.+++........+...+..++.+++..+.-||.. ||+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 12468999999875 799888532223456677889999999999999999 9999999999999985 467
Q ss_pred ceeccccchh
Q 006178 504 PKLVDFDSWK 513 (658)
Q Consensus 504 ~kl~DFGla~ 513 (658)
+.++||+.+.
T Consensus 184 ~~LIDl~r~~ 193 (268)
T PRK15123 184 LSVIDLHRAQ 193 (268)
T ss_pred EEEEECCccc
Confidence 8999999664
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.5e-10 Score=125.30 Aligned_cols=243 Identities=14% Similarity=0.121 Sum_probs=155.8
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+-+-+|+++.++-++-.. |...+.|........ .....+....+-.++-..+||-+++..--+.... -.+++++|.
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i-~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs--P~~L~~~~~ 886 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKI-RTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS--PLPLVGHYL 886 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhh-ccccccccCCccCccccCCCCceecccCCCCCCC--CcchhhHHh
Confidence 456778888888766432 211222211110000 0001112233333333345566665554433344 348999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC---
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS--- 519 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~--- 519 (658)
.+++|...++.-+ ..+.+-.......+.++++|||.. .++|||++|.|++...++..++.|||.........
T Consensus 887 ~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 887 NGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred ccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 9999999998654 355555666777888999999998 79999999999999999999999998443321100
Q ss_pred C--------------------------CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc
Q 006178 520 E--------------------------KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN 573 (658)
Q Consensus 520 ~--------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~ 573 (658)
. ........+++-|.+||...+......+|.|++|++++|.++|.+||......
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence 0 00112234466789999999999999999999999999999999999654321
Q ss_pred HHHHHHHhhcCCcccccccCC--cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 006178 574 LVDWAKDYLELPEVMSYVVDP--ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQ 626 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~ 626 (658)
. ....+... .+..-+.....+..+++.+.+..+|.+|-.+.
T Consensus 1042 ~------------~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1042 Q------------IFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred h------------hhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 1 11111111 11222344456677888899999999997654
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.6e-11 Score=116.52 Aligned_cols=175 Identities=21% Similarity=0.285 Sum_probs=118.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.+++.||||+|+|+-.-|..|.+|..|.+|.+.+ |+|+...-..|.+|..|+.|.+.-|++.-...+.|..|++|..|.
T Consensus 91 ~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLs 170 (498)
T KOG4237|consen 91 HRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLS 170 (498)
T ss_pred hhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhc
Confidence 4789999999999998899999999998887776 888865556688888888888877777755555566666665555
Q ss_pred cccccCCCCCh---------------------------------------------------------------------
Q 006178 149 LQSNGLTGRLP--------------------------------------------------------------------- 159 (658)
Q Consensus 149 Ls~N~l~g~~p--------------------------------------------------------------------- 159 (658)
|.+|.+. .++
T Consensus 171 lyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~e 249 (498)
T KOG4237|consen 171 LYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLE 249 (498)
T ss_pred ccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHH
Confidence 5555432 111
Q ss_pred ------------------hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEE
Q 006178 160 ------------------AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVA 216 (658)
Q Consensus 160 ------------------~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l 216 (658)
..|..|++|+.|+|++|++++.-+ +.+.+ ...+..+++..|++.. |.+++.|+.|
T Consensus 250 sl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~-~aFe~-~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL 327 (498)
T KOG4237|consen 250 SLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIED-GAFEG-AAELQELYLTRNKLEFVSSGMFQGLSGLKTL 327 (498)
T ss_pred hHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhh-hhhcc-hhhhhhhhcCcchHHHHHHHhhhccccceee
Confidence 125566777777777777763332 22221 1345556666666543 5567888888
Q ss_pred EccCCcCcccCcccCCCC---CCCccCCCccCCC
Q 006178 217 DFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 217 ~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
+|.+|+++..-|..|..+ ..+.+-+|.+...
T Consensus 328 ~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 328 SLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN 361 (498)
T ss_pred eecCCeeEEEecccccccceeeeeehccCcccCc
Confidence 999998887777666543 4456666655443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-09 Score=115.23 Aligned_cols=168 Identities=32% Similarity=0.486 Sum_probs=100.7
Q ss_pred CEEEEEecCCCCcccCCccccCCC-CCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 71 RVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.++.|++.+|.++. +++..+.+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|++
T Consensus 117 ~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 46666666666654 555556663 6777777777766 45555666777777777777776 56665556667777777
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc----ccccCCCCCcEEEccCCcCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL----TGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l----~~~~~l~~L~~l~ls~N~l~g 225 (658)
++|+++ .+|..+..+..|++|.+++|.+. .++... ....++..+.+..|.+ ..+..+.+++.|++++|.++
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~--~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~- 268 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSL--SNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS- 268 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhh--hhcccccccccCCceeeeccchhccccccceecccccccc-
Confidence 777776 56666555566777777777422 111110 0112333344555554 33556677888888888776
Q ss_pred cCcc--cCCCCCCCccCCCccCC
Q 006178 226 SIPK--CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 226 ~ip~--~l~~l~~~~~~~n~~~~ 246 (658)
.++. .+.++..+++++|.+..
T Consensus 269 ~i~~~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 269 SISSLGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred ccccccccCccCEEeccCccccc
Confidence 4443 23445566777775544
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-09 Score=73.70 Aligned_cols=41 Identities=41% Similarity=0.943 Sum_probs=30.8
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCCCCCCC-CCCCCccceeec
Q 006178 26 TNEFWALTTFKEAIYEDPHLVLSNWNALD-ADPCHWTGIACS 66 (658)
Q Consensus 26 ~~~~~~l~~~k~~~~~~~~~~l~~w~~~~-~~~c~w~gv~C~ 66 (658)
+.|+.||++||+++..+|.+.+.+|+... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57899999999999867778899998753 799999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.6e-09 Score=98.31 Aligned_cols=104 Identities=29% Similarity=0.417 Sum_probs=43.2
Q ss_pred CEEEEEecCCCCcccCCcccc-CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccc-cCCcccceee
Q 006178 71 RVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~ 148 (658)
+++.|+|.+|.++.. ..++ .+++|+.|+|++|.++. ++ .+..+++|+.|++++|+++ .+++.+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 578899999999763 3566 58999999999999985 44 5788999999999999998 566555 4689999999
Q ss_pred cccccCCCCC-hhhhcCCCCCCEEeCCCCCCc
Q 006178 149 LQSNGLTGRL-PAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 149 Ls~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~ 179 (658)
|++|++...- -..+..+++|+.|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 9999997421 145778999999999999887
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-09 Score=80.87 Aligned_cols=59 Identities=36% Similarity=0.476 Sum_probs=32.0
Q ss_pred CCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 95 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
+|+.|+|++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555554444455555555555555554
|
... |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.8e-08 Score=95.43 Aligned_cols=134 Identities=20% Similarity=0.249 Sum_probs=97.8
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeecc------------------ccchhhHHHHHHHHHHHHhccCC--Cc
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEE------------------HWTGYLELYFQREVADLARINHE--NT 420 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~------------------~~~~~~~~~~~~E~~~l~~l~H~--nI 420 (658)
.+.+.||-|--+.||.|..+.|.++|+|.-..... .+.........+|.++|.++.-. .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 34589999999999999999999999986432211 11122334578899999999655 77
Q ss_pred cceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC
Q 006178 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 421 v~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 500 (658)
.+.+++- ...+||||+++-.|...- ++....-.|+..|++-+.-.-.. ||||+|+.+-||++++
T Consensus 174 P~P~~~n------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 174 PKPIAWN------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCccccc------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 7777653 348999999886665432 12333444555555555555566 9999999999999999
Q ss_pred CCCceecccc
Q 006178 501 DFSPKLVDFD 510 (658)
Q Consensus 501 ~~~~kl~DFG 510 (658)
||.+.++||-
T Consensus 238 dg~~~vIDwP 247 (304)
T COG0478 238 DGDIVVIDWP 247 (304)
T ss_pred CCCEEEEeCc
Confidence 9999999994
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.9e-08 Score=90.41 Aligned_cols=143 Identities=13% Similarity=0.087 Sum_probs=105.9
Q ss_pred ccCCCCeeEEEEEecCCCeEEEEEEeeec-cccc-hhhHHHHHHHHHHHHhccCC--CccceeeEEe---cCCCCceEEE
Q 006178 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKE-EHWT-GYLELYFQREVADLARINHE--NTGKLLGYCR---ESSPFTRMLV 438 (658)
Q Consensus 366 lG~G~~g~Vy~~~~~~~~~vavk~~~~~~-~~~~-~~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~---~~~~~~~~lv 438 (658)
-|+||.+-|++..+.+. .+.+|+-...- .... ...+..|.+|...+.++... .+.+.. ++. .+..+..+||
T Consensus 26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 47799999999887554 68888764211 1111 33456799999999999432 344554 332 2223357899
Q ss_pred EEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--ceeccccchh
Q 006178 439 FDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKLVDFDSWK 513 (658)
Q Consensus 439 ~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~ 513 (658)
+|-+++ -||.+++......+.+...+..+..++++.++-||+. ++.|+|+-+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998753 5899988765544678888999999999999999999 9999999999999986666 9999997544
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.4e-08 Score=99.62 Aligned_cols=171 Identities=16% Similarity=0.221 Sum_probs=124.5
Q ss_pred CCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC--CCceEEEEEecCC-C
Q 006178 370 PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFDYASN-G 445 (658)
Q Consensus 370 ~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~~~lv~E~~~~-g 445 (658)
.-.+.||+... ||..++.|++......... ....-+++++++.|.|||++.+++.... ....++||+|.++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n----k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN----KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcc----cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 34578999865 8889999988433222111 1234578899999999999999886321 1268999999985 5
Q ss_pred ChhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 446 TLYEHLHYG-------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 446 sL~~~l~~~-------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
+|.++--.. .....++...+.++.|+..||.++|+. |+.-+-|.|.+|+++.+.+++|+..|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 677764311 122478899999999999999999999 9999999999999999999999888865
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCC
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p 566 (658)
..+.... . |-+.. -.+-|.=.||.+++.|.||..-
T Consensus 441 Dvl~~d~--------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 441 DVLQEDP--------------T--EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred eeecCCC--------------C--cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 5432211 0 11111 1356888999999999999643
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.9e-10 Score=106.19 Aligned_cols=125 Identities=25% Similarity=0.258 Sum_probs=70.9
Q ss_pred CCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccc
Q 006178 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHG 196 (658)
Q Consensus 117 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~ 196 (658)
-+.|+.||||+|.++ .+-++..-++.++.|++|+|.+. .+ +.+..|++|+.||||+|.++ .+-... ....++..
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh--~KLGNIKt 356 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWH--LKLGNIKT 356 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhH--hhhcCEee
Confidence 345666666666665 55555555666666666666665 22 23555666666666666655 221110 11234455
Q ss_pred cccCCCCc---ccccCCCCCcEEEccCCcCcccC-cccCCCCC---CCccCCCccCCC
Q 006178 197 MYASSANL---TGLCHLSQLKVADFSYNFFVGSI-PKCLEYLP---STSFQGNCLQNK 247 (658)
Q Consensus 197 ~~l~~n~l---~~~~~l~~L~~l~ls~N~l~g~i-p~~l~~l~---~~~~~~n~~~~~ 247 (658)
+.++.|.+ +|+..|-+|..||+++|++..-- -..+++|| .+.+.+|.+...
T Consensus 357 L~La~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 357 LKLAQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred eehhhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 55555543 56777788899999999875110 12345554 356778866654
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.1e-09 Score=80.30 Aligned_cols=61 Identities=38% Similarity=0.508 Sum_probs=55.6
Q ss_pred CCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCC
Q 006178 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178 (658)
Q Consensus 118 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l 178 (658)
++|++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999965557889999999999999999977778999999999999999985
|
... |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.7e-09 Score=114.05 Aligned_cols=150 Identities=18% Similarity=0.218 Sum_probs=103.0
Q ss_pred HHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC-------cccccCccccCCcccccC
Q 006178 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG-------TLGSQGAICILPSSLEAR 542 (658)
Q Consensus 470 qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~-------~~~~~~~~~~aPE~~~~~ 542 (658)
+++.|+.|+|.. +++||++|.|++|.++..+..||+.|+++............ ........|.|||++...
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 344899999987 49999999999999999999999999987654432221111 112224558899999998
Q ss_pred CCCccccchhhHHHHHHHH-hCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCC
Q 006178 543 HLDVQGNIYAFGVLLLEII-SGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK 621 (658)
Q Consensus 543 ~~~~ksDVwS~Gvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~ 621 (658)
..+.++|+||+||.+|.+. .|+.-+...+..+..-.... ..+-....+..+.+.++.+=+.+++..++..
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~---------~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~ 255 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN---------LLNAGAFGYSNNLPSELRESLKKLLNGDSAV 255 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc---------ccccccccccccCcHHHHHHHHHHhcCCccc
Confidence 8899999999999999999 45554443322211110000 0111112233455667778888999999999
Q ss_pred CCCHHHHHH
Q 006178 622 RPSMQELCT 630 (658)
Q Consensus 622 RPs~~evl~ 630 (658)
||++.++..
T Consensus 256 rp~~~~l~~ 264 (700)
T KOG2137|consen 256 RPTLDLLLS 264 (700)
T ss_pred Ccchhhhhc
Confidence 997776653
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.6e-07 Score=90.31 Aligned_cols=108 Identities=20% Similarity=0.260 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHhccC--CCccceeeEEecCCC--CceEEEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 006178 402 ELYFQREVADLARINH--ENTGKLLGYCRESSP--FTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476 (658)
Q Consensus 402 ~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~--~~~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~ 476 (658)
.....+|...+.++.. =.+.+.+++.+.... ...++|+|++++. +|.+++..... .+......++.++++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 3467889998888843 345677777665321 2458999999874 79999875333 566778899999999999
Q ss_pred HhhhcCCCCeeeccCCCcceeecCCC---Cceeccccchhh
Q 006178 477 YLHTELGPPFTISELNSSAVYLTEDF---SPKLVDFDSWKT 514 (658)
Q Consensus 477 yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~ 514 (658)
-||.. ||+|+|+++.|||++.+. .+.++||+.++.
T Consensus 133 ~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999 999999999999999886 899999986553
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.8e-08 Score=107.67 Aligned_cols=154 Identities=30% Similarity=0.452 Sum_probs=127.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|++++|.+.. +|..++.++.|+.|++++|+++ .+|...+.++.|+.|++++|+++ .+|..+..+..|+.|+++
T Consensus 141 nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchhh-hhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 79999999999975 5577999999999999999999 57766668999999999999999 889888778889999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|.+. .++..+.++.++..|.+.+|++... +... .....+..++++.|.++. +..+.+|+.|++++|.++...
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~--~~l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PESI--GNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceeeec-cchh--ccccccceeccccccccccccccccCccCEEeccCccccccc
Confidence 99655 5788899999999999999998742 2211 112357778888888765 557889999999999999776
Q ss_pred cccC
Q 006178 228 PKCL 231 (658)
Q Consensus 228 p~~l 231 (658)
|...
T Consensus 294 ~~~~ 297 (394)
T COG4886 294 PLIA 297 (394)
T ss_pred hhhh
Confidence 6543
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.6e-09 Score=100.07 Aligned_cols=136 Identities=21% Similarity=0.246 Sum_probs=83.9
Q ss_pred ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhc
Q 006178 84 GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELG 163 (658)
Q Consensus 84 g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 163 (658)
|..-..+.....|++||||+|.++ .+..+..-++.++.|++|+|.+. .+ ..+..|++|+.||||+|.++ .+-.+-.
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~ 349 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHL 349 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHh
Confidence 333334445566667777777666 45555666667777777777665 22 23666667777777777666 3444445
Q ss_pred CCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcc------cccCCCCCcEEEccCCcCcccC
Q 006178 164 NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT------GLCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 164 ~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~------~~~~l~~L~~l~ls~N~l~g~i 227 (658)
.|.|.+.|.|+.|.+.. +. .......+..+++.+|++. ++++|+-|+++.|.+|.+.+.+
T Consensus 350 KLGNIKtL~La~N~iE~-LS---GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIET-LS---GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhcCEeeeehhhhhHhh-hh---hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 56666667777766541 11 1111234555666666654 4778899999999999998654
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.8e-07 Score=98.27 Aligned_cols=148 Identities=18% Similarity=0.204 Sum_probs=95.6
Q ss_pred hhhc-ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccc------------------------------------hhhH
Q 006178 360 EDFS-NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT------------------------------------GYLE 402 (658)
Q Consensus 360 ~~f~-~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~------------------------------------~~~~ 402 (658)
.+|+ +.|+.++-|.||+|++++|+.||||...+.-...- -..+
T Consensus 126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E 205 (517)
T COG0661 126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE 205 (517)
T ss_pred HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence 3455 78999999999999999999999998765422110 0011
Q ss_pred HHHHHHHHHHHhcc----CCCccceeeEEec-CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 006178 403 LYFQREVADLARIN----HENTGKLLGYCRE-SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG-LK 476 (658)
Q Consensus 403 ~~~~~E~~~l~~l~----H~nIv~l~~~~~~-~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~g-L~ 476 (658)
-++.+|+..+.++. +..=+++=.++++ .+ ...|+|||++|-.+.+...-+. ..++.. .++..++++ +.
T Consensus 206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~--~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k---~ia~~~~~~f~~ 279 (517)
T COG0661 206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTT--RRVLTMEWIDGIKISDIAALKS-AGIDRK---ELAELLVRAFLR 279 (517)
T ss_pred hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccC--CcEEEEEeeCCEecccHHHHHh-cCCCHH---HHHHHHHHHHHH
Confidence 23556666666652 2222222233332 22 4589999999988888743222 134433 333333332 22
Q ss_pred HhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 477 yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
.+-.. |++|.|..|.||+++.++++-+.|||+...+.
T Consensus 280 q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 280 QLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHHhc---CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 33334 99999999999999999999999999876654
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.5e-06 Score=82.17 Aligned_cols=132 Identities=8% Similarity=0.014 Sum_probs=81.3
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC--ccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~~~lv~E~ 441 (658)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++....+ ...+|||+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~--~~glv~e~ 75 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGG--RLGLIYEL 75 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCC--eeeeeeee
Confidence 46899999999984 24456666653211 2234688999999985433 577788877666 45889999
Q ss_pred cCCCC-hhhhhccCCCCCCCHHHHHHHHHHHHHHH---------------------------------------HHhhhc
Q 006178 442 ASNGT-LYEHLHYGERCQVSWTRRMKIVIGIARGL---------------------------------------KYLHTE 481 (658)
Q Consensus 442 ~~~gs-L~~~l~~~~~~~l~~~~~~~i~~qia~gL---------------------------------------~yLH~~ 481 (658)
++|.+ +...+. .+......++.++++.+ ++|...
T Consensus 76 i~G~~~~~~~~~------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~ 149 (226)
T TIGR02172 76 IVGKRSFSRIIS------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEV 149 (226)
T ss_pred cCCccchhhhhc------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhC
Confidence 98853 221111 00111111111111111 222211
Q ss_pred -CCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 482 -LGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 482 -~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..+.++|+|+.|.||++++++ +.|+||+.+.
T Consensus 150 ~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 150 PDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 134678999999999999888 9999998653
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.6e-06 Score=85.17 Aligned_cols=261 Identities=13% Similarity=0.118 Sum_probs=150.9
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeE----EecCCCC-ceE
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGY----CRESSPF-TRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~----~~~~~~~-~~~ 436 (658)
+..||+|+.+.+|-.---. ..++|........ ... +-+..|... .||-+-.-+.+ ....+.. ...
T Consensus 16 gr~LgqGgea~ly~l~e~~--d~VAKIYh~Pppa----~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 16 GRPLGQGGEADLYTLGEVR--DQVAKIYHAPPPA----AQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CccccCCccceeeecchhh--chhheeecCCCch----HHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 3679999999999643211 2244554332211 111 122333333 56644331111 1111111 256
Q ss_pred EEEEecCCC-Chhhhhc----cCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccc
Q 006178 437 LVFDYASNG-TLYEHLH----YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511 (658)
Q Consensus 437 lv~E~~~~g-sL~~~l~----~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 511 (658)
+.|+.+++- ...+++. +..-....|.-.++.++.+|.+.+-||.. |.+-+|+.++|+|+++++.+.|.|=..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 788877653 2222222 11223578999999999999999999999 999999999999999999999988543
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhC-CCCCCCCC------CcHH-HHH
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISG-RPPCCKDK------GNLV-DWA 578 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG-~~p~~~~~------~~~~-~~~ 578 (658)
-... .. .....+..+...|.+||.-. +-.-+...|-|.+||++++++.| +.||.+-. .... ...
T Consensus 164 fqi~-~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia 240 (637)
T COG4248 164 FQIN-AN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA 240 (637)
T ss_pred eeec-cC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence 2211 11 11112223445677788644 33456789999999999999987 99996421 0000 111
Q ss_pred HHhhcCCcccccccCCcCCCCC-HHHHHHHHHHHHHccCC--CCCCCCCHHHHHHHHhhccCC
Q 006178 579 KDYLELPEVMSYVVDPELKHFS-YDDLKVICEVVNLCVNP--DITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~--dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+.....-.....+.-...| .-.+..+..+..+|+.. .+.-|||++..+..|.++.+.
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 0000000000001111111122 22345667778888865 367899999999998876653
|
|
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.6e-06 Score=93.20 Aligned_cols=162 Identities=16% Similarity=0.170 Sum_probs=102.2
Q ss_pred cccccccHHHHHHHH------------hhhc-ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccc-------------
Q 006178 345 KDVVRFSRQELEVAC------------EDFS-NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT------------- 398 (658)
Q Consensus 345 ~~~~~~~~~~l~~~~------------~~f~-~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~------------- 398 (658)
..++.|+++|+.+-- ..|+ +.||.-+.|.||+|+.++|..||||.-.+.-+...
T Consensus 135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~ 214 (538)
T KOG1235|consen 135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKV 214 (538)
T ss_pred ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHH
Confidence 356667777664433 2344 78999999999999999999999998755432210
Q ss_pred --------------h------hhHHHHHHHHHHHHhc----cCCC------ccceeeEEecCCCCceEEEEEecCCCChh
Q 006178 399 --------------G------YLELYFQREVADLARI----NHEN------TGKLLGYCRESSPFTRMLVFDYASNGTLY 448 (658)
Q Consensus 399 --------------~------~~~~~~~~E~~~l~~l----~H~n------Iv~l~~~~~~~~~~~~~lv~E~~~~gsL~ 448 (658)
+ ..+-+|.+|++-..++ .|-+ |.++|-.+.. ...|+||||+|.-+.
T Consensus 215 l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----~RVLtME~~~G~~i~ 290 (538)
T KOG1235|consen 215 LQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLST----KRVLTMEYVDGIKIN 290 (538)
T ss_pred HHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCc----ceEEEEEecCCccCC
Confidence 0 0011355666655444 3555 4444433322 459999999998777
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC----CCCceeccccchhhhh
Q 006178 449 EHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 449 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~----~~~~kl~DFGla~~~~ 516 (658)
|.-.-. ...++...+..-+.++. ++.-...|++|+|=.|.||+++. ++++.+-|||+...+.
T Consensus 291 Dl~~i~-~~gi~~~~i~~~l~~~~-----~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 291 DLDAID-KRGISPHDILNKLVEAY-----LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred CHHHHH-HcCCCHHHHHHHHHHHH-----HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 653211 11355554433333322 22212228999999999999994 5689999999877654
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1e-07 Score=96.31 Aligned_cols=153 Identities=22% Similarity=0.223 Sum_probs=69.8
Q ss_pred CEEEEEecCCCCcccCC--ccccCCCCCcEEeccCCcccccCCccc-CCCCCCCEEEccCCcCCCCC-cccccCCcccce
Q 006178 71 RVLKINISGSSLKGFLA--PELGLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPI-PPEIGNLTGLVK 146 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~--~~~~~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~ 146 (658)
.|+.|||++|-+...-+ .-...|++|+.|+|+.|++.-...... ..+++|+.|.|+.+.|+..- -.-+..+++|..
T Consensus 147 ~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~ 226 (505)
T KOG3207|consen 147 NVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEV 226 (505)
T ss_pred cceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHH
Confidence 45666666665554322 123455666666666666542221111 23455666666666554210 011234556666
Q ss_pred eecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----------cCCCCCcE
Q 006178 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----------CHLSQLKV 215 (658)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----------~~l~~L~~ 215 (658)
|+|..|..-+.--.....+..|+.|||++|++- ..+.....+-.+.+..++++.+.++.+ ..+.+|++
T Consensus 227 L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~ 305 (505)
T KOG3207|consen 227 LYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEY 305 (505)
T ss_pred hhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhccccccee
Confidence 666666322222222334455666666666654 222211111122333444444443321 22455666
Q ss_pred EEccCCcCc
Q 006178 216 ADFSYNFFV 224 (658)
Q Consensus 216 l~ls~N~l~ 224 (658)
|+++.|++.
T Consensus 306 L~i~~N~I~ 314 (505)
T KOG3207|consen 306 LNISENNIR 314 (505)
T ss_pred eecccCccc
Confidence 666666553
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.2e-06 Score=78.78 Aligned_cols=139 Identities=14% Similarity=0.191 Sum_probs=96.7
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccch--------------------hhHHHHHHHHHHHHhc--cCCCcc
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG--------------------YLELYFQREVADLARI--NHENTG 421 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~--------------------~~~~~~~~E~~~l~~l--~H~nIv 421 (658)
-.|+.|.-+.||+|...++..+|||+.......... ....-..+|..-|+++ -+-.+.
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 357788888999999988999999987543211100 0112245688888888 355666
Q ss_pred ceeeEEecCCCCceEEEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC
Q 006178 422 KLLGYCRESSPFTRMLVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 422 ~l~~~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 500 (658)
+.+++. .-.|||||+... .-.-.|+.- ++...+...+..++++.+.-|-..+ ++||+||..=|||+.
T Consensus 134 ~Pi~~~------~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~- 201 (268)
T COG1718 134 EPIAFR------NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH- 201 (268)
T ss_pred Cceeec------CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-
Confidence 666654 237999999542 111122211 2344467788889999998888733 999999999999999
Q ss_pred CCCceeccccchhh
Q 006178 501 DFSPKLVDFDSWKT 514 (658)
Q Consensus 501 ~~~~kl~DFGla~~ 514 (658)
++.+.|+|||-|..
T Consensus 202 ~~~p~iID~~QaV~ 215 (268)
T COG1718 202 DGEPYIIDVSQAVT 215 (268)
T ss_pred CCeEEEEECccccc
Confidence 78999999996654
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.7e-07 Score=99.05 Aligned_cols=168 Identities=24% Similarity=0.262 Sum_probs=94.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..+..|+|.+|.+.+. ...+..+++|++|+|++|.|+...+ +..++.|+.|++++|.++. + ..+..+++|+.+++
T Consensus 95 ~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhheeccCcchh-c-cCCccchhhhcccC
Confidence 3566677777777653 2225666777777777777764332 4556667777777777652 2 34555667777777
Q ss_pred ccccCCCCChhh-hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCC---CC--CcEEEccCCcC
Q 006178 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL---SQ--LKVADFSYNFF 223 (658)
Q Consensus 150 s~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l---~~--L~~l~ls~N~l 223 (658)
++|.++. +... +..+.+|+.+++.+|.+. .+... .....+...++..|.++.+.++ .. |+.+++++|.+
T Consensus 170 ~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~-~i~~~---~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i 244 (414)
T KOG0531|consen 170 SYNRIVD-IENDELSELISLEELDLGGNSIR-EIEGL---DLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRI 244 (414)
T ss_pred Ccchhhh-hhhhhhhhccchHHHhccCCchh-cccch---HHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCcc
Confidence 7777763 3322 456667777777777664 11110 0001222235555555544333 22 67788888877
Q ss_pred ccc--CcccCCCCCCCccCCCccCCC
Q 006178 224 VGS--IPKCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 224 ~g~--ip~~l~~l~~~~~~~n~~~~~ 247 (658)
.-. ....+..++.++...|.+...
T Consensus 245 ~~~~~~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 245 SRSPEGLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred ccccccccccccccccchhhcccccc
Confidence 632 223445556666666655543
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.4e-07 Score=96.29 Aligned_cols=182 Identities=13% Similarity=0.050 Sum_probs=130.1
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC-ccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN-TGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+-.++|+++++||.+....+....+.+... ....-++++|.+++||| .+..++-+..+. ..+++++++
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~---------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~--~~~i~~~i~ 316 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT---------LSRRLAIELLDKVNNPNPVVRYLEDYDGED--YLWIPMRIC 316 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc---------hhhHHHHHHHHHccCCCCcccccccCCccc--ccchhhhhh
Confidence 456889999999998766666655555322 23456889999999999 666665555444 679999999
Q ss_pred CCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 443 SNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 443 ~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
..+ +-...... ....+..-+...+.+.-.++++|+|+. .-+||| ||+..+ ...|..||+....+....
T Consensus 317 s~~rs~~~~~~~-se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-- 385 (829)
T KOG0576|consen 317 STGRSSALEMTV-SEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-- 385 (829)
T ss_pred cCCccccccCCh-hhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc--
Confidence 876 22222211 111234445566777778999999997 668999 777765 678999999876654332
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
.......+..++|||+.....+..+.|+|+.|+-..++--|.+|-.
T Consensus 386 -~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 -KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred -ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 2233345677899999999999999999999998888888877753
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.4e-08 Score=83.45 Aligned_cols=109 Identities=23% Similarity=0.370 Sum_probs=81.2
Q ss_pred CCEEEEEecCCCCcccCCc---cccCCCCCcEEeccCCcccccCCcccCC-CCCCCEEEccCCcCCCCCcccccCCcccc
Q 006178 70 DRVLKINISGSSLKGFLAP---ELGLLTYLQELILHGNNLIGIIPKELGL-LKRLKILDLGTNQLTGPIPPEIGNLTGLV 145 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~---~~~~l~~L~~L~L~~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 145 (658)
.....++|+++.|. .++. .+....+|+..+|++|.|. .+|..|.. .+.++.|+|++|.++ .+|.++..++.|+
T Consensus 27 kE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr 103 (177)
T KOG4579|consen 27 KELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALR 103 (177)
T ss_pred HHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhh
Confidence 34556777777663 2333 3455566777788888887 45655543 457888899999988 7888888899999
Q ss_pred eeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
.|+++.|.|. ..|..+..|.+|-.|+..+|.+. +||
T Consensus 104 ~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid 139 (177)
T KOG4579|consen 104 SLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EID 139 (177)
T ss_pred hcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCc
Confidence 9999999888 67888888888888888888775 555
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.5e-06 Score=78.63 Aligned_cols=104 Identities=26% Similarity=0.343 Sum_probs=81.4
Q ss_pred HHHHHHHHhccC-CCccceeeEEecCCCCceEEEEEecCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 006178 406 QREVADLARINH-ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELG 483 (658)
Q Consensus 406 ~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~ 483 (658)
..|.-+++.+++ +++++++|+|- .++|.||...+++...-.. ..-..-+|..|.+||.++++.+.++++...
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG------~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG------RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC------CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 358888888865 69999999992 2789999987766432100 001136999999999999999999998544
Q ss_pred CCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 484 PPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 484 ~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
..+.-.|++|+|+-+++++++|++|...+...
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 46888999999999999999999999865443
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.2e-07 Score=80.82 Aligned_cols=113 Identities=21% Similarity=0.204 Sum_probs=90.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.-+++.++|++|.+....+.--..++.++.|+|++|.++ .+|.++..++.|+.|++++|.|. ..|.-+..|.+|-.|+
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 357899999999998754443455678999999999998 68999999999999999999998 7888888899999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
..+|.+. .+|..+..-+.+-..++.++.+.+.-|.
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 9999998 6777654434444445666777665543
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.1e-08 Score=106.90 Aligned_cols=103 Identities=33% Similarity=0.361 Sum_probs=79.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcc-cccCCcccceeec
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L 149 (658)
.+...+.+.|.|.- +..++.-++.|+.|||++|+++..- .+..|++|++|||++|.+. .+|. ....+. |+.|+|
T Consensus 165 ~L~~a~fsyN~L~~-mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLVL-MDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHHh-HHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 35566777777754 5667788889999999999998543 7888999999999999998 5653 233444 899999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
++|.++. + ..+.+|.+|+.|||+.|-|.+
T Consensus 240 rnN~l~t-L-~gie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 240 RNNALTT-L-RGIENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred cccHHHh-h-hhHHhhhhhhccchhHhhhhc
Confidence 9999883 3 357788899999999998764
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=9.7e-08 Score=101.95 Aligned_cols=120 Identities=29% Similarity=0.358 Sum_probs=85.1
Q ss_pred CCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccc
Q 006178 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (658)
Q Consensus 119 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~ 198 (658)
.|.+.+.+.|.+. .+-.++.-++.|+.|||++|+++. . +.+..|++|++|||+.|.|. .+|.....+- .+..+.
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v-~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc--~L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-V-DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC--KLQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-h-HHHHhcccccccccccchhc-cccccchhhh--hheeee
Confidence 5677888888887 666777788889999999999883 3 37888889999999999887 6665322211 244567
Q ss_pred cCCCCcc---cccCCCCCcEEEccCCcCcccC---c-ccCCCCCCCccCCCcc
Q 006178 199 ASSANLT---GLCHLSQLKVADFSYNFFVGSI---P-KCLEYLPSTSFQGNCL 244 (658)
Q Consensus 199 l~~n~l~---~~~~l~~L~~l~ls~N~l~g~i---p-~~l~~l~~~~~~~n~~ 244 (658)
+.+|.++ ++.+|.+|+.||+|+|-+++-- | ..+..|..+.+.||.+
T Consensus 239 lrnN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 239 LRNNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ecccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 7777765 4567888999999999876431 1 1234455677788843
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 658 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-29 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-28 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-17 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-17 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-14 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-14 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-13 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-13 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 3e-12 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-11 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 1e-11 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-11 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-09 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 5e-09 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 5e-09 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 8e-09 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 9e-09 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-08 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-08 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-08 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 2e-08 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-08 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-08 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-08 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 2e-08 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-08 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 3e-08 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-08 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-08 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-08 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 7e-08 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 7e-08 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 1e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 2e-07 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 3e-07 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-07 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 8e-07 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 9e-07 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 9e-07 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 9e-07 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-06 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-06 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-06 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-06 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 1e-06 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-06 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-06 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-06 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-06 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-06 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-06 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 2e-06 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-06 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-06 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-06 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 3e-06 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 3e-06 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 3e-06 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-06 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 3e-06 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-06 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 3e-06 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-06 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 4e-06 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-06 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 4e-06 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-06 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-06 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 5e-06 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 5e-06 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 5e-06 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-06 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 5e-06 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-06 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 6e-06 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 7e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 7e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 8e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 8e-06 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 8e-06 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 9e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 9e-06 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-05 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 1e-05 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-05 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-05 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 1e-05 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 1e-05 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-05 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 1e-05 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 1e-05 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-05 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 1e-05 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-05 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-05 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-05 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-05 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-05 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-05 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-05 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 2e-05 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-05 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-05 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-05 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-05 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-05 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-05 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-05 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-05 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-05 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 2e-05 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-05 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 2e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-05 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-05 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 2e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-05 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 3e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 3e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 3e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 3e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 3e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 3e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 3e-05 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-05 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 3e-05 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 3e-05 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 3e-05 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 3e-05 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 4e-05 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 4e-05 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-05 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 4e-05 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 4e-05 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 5e-05 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 5e-05 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 5e-05 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 5e-05 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 5e-05 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 6e-05 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 6e-05 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 7e-05 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 7e-05 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 7e-05 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 8e-05 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 8e-05 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 8e-05 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 9e-05 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 9e-05 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 1e-04 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 1e-04 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-04 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-04 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 1e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 2e-04 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-04 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 3e-04 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 3e-04 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 4e-04 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 4e-04 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 4e-04 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 4e-04 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 4e-04 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 4e-04 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 5e-04 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 7e-04 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 8e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 658 | |||
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 3e-60 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 1e-55 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 3e-54 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-52 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-36 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 1e-34 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 6e-15 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 7e-40 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-38 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-36 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 3e-35 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 4e-34 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 9e-34 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 3e-33 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 7e-33 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-31 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 4e-29 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 7e-29 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 2e-36 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 6e-28 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 3e-27 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-27 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 9e-11 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 6e-27 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 5e-23 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 7e-23 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-22 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 8e-20 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-17 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-15 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 1e-26 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 2e-26 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 3e-26 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 8e-26 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 9e-24 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-23 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-21 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-20 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 3e-17 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-16 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-25 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-23 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-22 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-21 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-20 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-19 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-18 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-18 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-17 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-11 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-09 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 3e-25 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 6e-25 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 8e-25 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 1e-24 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 1e-24 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 5e-24 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 1e-23 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 3e-23 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 7e-22 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 8e-21 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-20 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 9e-13 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-12 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 1e-20 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-20 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 5e-17 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-16 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-16 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 1e-14 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-13 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-10 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 4e-10 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-07 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-05 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 5e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 6e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 7e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 6e-17 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 1e-16 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 4e-12 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-11 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 5e-19 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-19 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-18 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-17 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 9e-16 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-15 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 3e-13 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-08 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 6e-19 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-17 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-17 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 5e-16 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-14 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-11 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 7e-10 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 8e-19 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-17 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-16 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-12 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 4e-07 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-18 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-17 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-16 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 5e-13 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 5e-08 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 3e-05 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 5e-04 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 7e-18 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-16 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-16 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 5e-15 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 7e-14 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 4e-10 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-06 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-16 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-15 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-14 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-13 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-12 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 9e-09 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-06 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-05 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 9e-16 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-14 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-13 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-10 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 5e-10 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 4e-07 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-15 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 2e-14 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 4e-13 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 5e-13 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 4e-11 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-05 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 6e-15 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 5e-14 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 7e-13 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 4e-11 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-05 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 9e-15 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 9e-11 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 6e-08 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-05 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-14 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-13 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-12 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-14 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 5e-13 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 8e-11 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-10 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 4e-07 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-06 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-05 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-14 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-12 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-11 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 6e-11 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 6e-11 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 6e-10 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 9e-14 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 5e-11 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 7e-11 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 2e-05 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-13 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-11 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-09 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 3e-13 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 4e-11 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 7e-10 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 4e-13 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-10 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 3e-09 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-07 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 5e-05 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 4e-13 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-12 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-11 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 7e-06 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 6e-13 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 7e-13 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 7e-11 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-11 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-08 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 6e-08 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 6e-08 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 7e-13 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 8e-13 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 7e-12 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-11 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 2e-10 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 3e-09 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-12 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-11 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 5e-10 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-04 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-12 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 9e-11 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-08 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 4e-07 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 8e-07 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 7e-04 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 6e-12 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 5e-11 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 8e-11 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-07 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-12 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-11 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-09 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-12 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-11 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-09 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 4e-12 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-11 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 1e-10 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-10 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-04 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 5e-12 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-10 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 8e-07 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 5e-12 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 4e-08 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-06 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 6e-12 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 3e-11 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-10 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 6e-09 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 8e-09 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 5e-08 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 9e-12 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 4e-10 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-09 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-08 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-04 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 1e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 3e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 1e-07 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 4e-11 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 7e-10 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 8e-09 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 5e-11 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 6e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 7e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-08 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 1e-10 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-10 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-09 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-08 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 2e-10 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-10 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 6e-08 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-07 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 3e-10 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 3e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-05 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 4e-10 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-10 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-09 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-07 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-07 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 4e-10 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 5e-10 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-09 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 7e-09 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-07 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 5e-10 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 5e-10 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 7e-10 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 8e-10 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-09 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 1e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-09 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-08 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-07 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 1e-09 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 3e-09 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 4e-09 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 5e-09 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 5e-09 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 6e-09 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 2e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 9e-08 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 5e-05 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-08 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-07 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 8e-06 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 4e-04 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-08 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 1e-08 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 1e-08 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 2e-08 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 2e-08 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 3e-08 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 3e-08 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 3e-08 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 4e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 7e-08 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 4e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-05 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 5e-08 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 7e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 7e-08 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 3e-04 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 7e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 8e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 3e-07 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-06 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 8e-08 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 8e-08 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 1e-07 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 1e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-07 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-07 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 2e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 2e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 2e-07 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 2e-07 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 2e-07 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 3e-07 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 3e-07 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 6e-07 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 8e-07 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 1e-06 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 1e-06 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-06 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 1e-06 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 2e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-06 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 3e-06 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 3e-06 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 4e-06 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 4e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-06 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 7e-06 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 3e-05 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 4e-05 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 5e-05 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 5e-05 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 5e-05 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 6e-05 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-04 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-04 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 1e-04 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 2e-04 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 2e-04 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 3e-04 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 3e-04 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 4e-04 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 4e-04 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 4e-04 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 6e-04 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 6e-04 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 7e-04 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 7e-04 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 7e-04 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 7e-04 |
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 3e-60
Identities = 98/316 (31%), Positives = 159/316 (50%), Gaps = 37/316 (11%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA ++FS NI+G VYKG + G +AV L KEE
Sbjct: 9 DPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL--KEER 66
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--YG 454
G EL FQ EV ++ H N +L G+C + R+LV+ Y +NG++ L
Sbjct: 67 TQGG-ELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLRERPE 123
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
+ + W +R +I +G ARGL YLH P ++ ++ + L E+F + DF
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG---- 179
Query: 515 ILAR--SEKNP-------GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRP 565
LA+ K+ GT+G I P L + +++ +GV+LLE+I+G+
Sbjct: 180 -LAKLMDYKDTHVTTAVRGTIG-----HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 566 P------CCKDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPD 618
D L+DW K L+ ++ + +VD +L+ ++ ++++ + +V LC
Sbjct: 234 AFDLARLANDDDVMLLDWVKGLLKEKKLEA-LVDVDLQGNYKDEEVEQLIQVALLCTQSS 292
Query: 619 ITKRPSMQELCTMLEG 634
+RP M E+ MLEG
Sbjct: 293 PMERPKMSEVVRMLEG 308
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 1e-55
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 50/317 (15%)
Query: 349 RFSRQELEVACEDFSNIIGSSPDSL--------VYKGTMKGGPEIAVISLCIKEEHWTGY 400
FS EL+ +F S + VYKG + +AV L + T
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEE 72
Query: 401 LELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV- 459
L+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR- 518
SW R KI G A G+ +LH ++ S+ + L E F+ K+ DF LAR
Sbjct: 131 SWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG-----LARA 182
Query: 519 ---------SEKNPGTLG------SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISG 563
+ + GT +G + + +IY+FGV+LLEII+G
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEALRG------------EITPKSDIYSFGVVLLEIITG 230
Query: 564 RPP--CCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK 621
P ++ L+D ++ + + + +D ++ ++ + V + C++ K
Sbjct: 231 LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNK 290
Query: 622 RPSMQELCTMLEGRIDT 638
RP ++++ +L+ +
Sbjct: 291 RPDIKKVQQLLQEMTAS 307
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 3e-54
Identities = 84/334 (25%), Positives = 140/334 (41%), Gaps = 55/334 (16%)
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEI 385
K + S D + + + R +LE A +F +IG VYKG ++ G ++
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 386 AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNG 445
A+ E G E F+ E+ L+ H + L+G+C E + +L++ Y NG
Sbjct: 67 ALKRR--TPESSQGIEE--FETEIETLSFCRHPHLVSLIGFCDERN--EMILIYKYMENG 120
Query: 446 TLYEHLHYGERCQV--SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
L HL+ + + SW +R++I IG ARGL YLHT ++ S + L E+F
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFV 177
Query: 504 PKLVDFDSWKTILARSEKNP----------GTLG--------SQGAICILPSSLEARHLD 545
PK+ DF +++ GTLG L
Sbjct: 178 PKITDFG-----ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKG-------------RLT 219
Query: 546 VQGNIYAFGVLLLEIISGRPP----CCKDKGNLVDWAKDYLELPEVMSYVVDPELK-HFS 600
+ ++Y+FGV+L E++ R ++ NL +WA + ++ +VDP L
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ-IVDPNLADKIR 278
Query: 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634
+ L+ + C+ RPSM ++ LE
Sbjct: 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 3e-52
Identities = 67/241 (27%), Positives = 98/241 (40%), Gaps = 25/241 (10%)
Query: 21 CNAFATNEFWALTTFKEAIYEDPHLVLSNWN-ALDADPCHWTGIACSDAR--DRVLKINI 77
CN + AL K+ + L S+W D W G+ C RV +++
Sbjct: 3 CNP---QDKQALLQIKKDLGNPTTL--SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDL 57
Query: 78 SGSSLKG--FLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
SG +L + L L YL L + G NNL+G IP + L +L L + ++G I
Sbjct: 58 SGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAI 117
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA--GSNSGYTA 192
P + + LV ++ N L+G LP + +L +L + D NR+ GA+P GS S
Sbjct: 118 PDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK--- 174
Query: 193 NIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF---QGNCL 244
M S LTG +L+ L D S N G +T N L
Sbjct: 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL 233
Query: 245 Q 245
Sbjct: 234 A 234
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 3e-36
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 24/163 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL-KILDLGTNQLTGP 133
++ S ++L G L P + L L + GN + G IP G +L + + N+LTG
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
IPP NL L ++L N L G G+ + +++HL +N L +
Sbjct: 190 IPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG---------- 238
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D N G++P+ L L
Sbjct: 239 ------KVGLSKNLNGL------DLRNNRIYGTLPQGLTQLKF 269
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 1e-34
Identities = 48/192 (25%), Positives = 69/192 (35%), Gaps = 37/192 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYL-QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
I G+ + G + G + L + + N L G IP L L +DL N L G
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGD 212
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
G+ KI+L N L L ++G +L L L NR+ G +P G
Sbjct: 213 ASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQG-------- 263
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQNKDPKQ 251
L L L + S+N G IP+ L+ +++ N
Sbjct: 264 -------------LTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN--------- 301
Query: 252 RATTLCGGAPPA 263
LCG PA
Sbjct: 302 --KCLCGSPLPA 311
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 6e-15
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
KI+++ +SL L ++GL L L L N + G +P+ L LK L L++ N L G
Sbjct: 225 KIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 134 IPPEIGNLTGLVKINLQSN-GLTG 156
I P+ GNL +N L G
Sbjct: 284 I-PQGGNLQRFDVSAYANNKCLCG 306
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 7e-40
Identities = 55/317 (17%), Positives = 105/317 (33%), Gaps = 45/317 (14%)
Query: 348 VRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYF 405
V + L + V+K + +AV K
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE-YVAV-----KIFPIQDKQSWQN 65
Query: 406 QREVADLARINHENTGKLLGYCRESSPFT--RMLVFDYASNGTLYEHLHYGERCQVSWTR 463
+ EV L + HEN + +G + + L+ + G+L + L VSW
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSWNE 122
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISE-------LNSSAVYLTEDFSPKLVDFDSWKTIL 516
I +ARGL YLH ++ + + S V L + + + DF L
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG-----L 177
Query: 517 ARSEKNPGTLGSQGAIC---------ILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPP 566
A + + G +L ++ + ++ ++YA G++L E+ S
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237
Query: 567 ----CCKDKGNLVDWAKDYLELPEVMSYVV----DPELKH--FSYDDLKVICEVVNLCVN 616
+ + + L ++ VV P L+ + + ++CE + C +
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297
Query: 617 PDITKRPSMQELCTMLE 633
D R S + +
Sbjct: 298 HDAEARLSAGCVGERIT 314
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 1e-38
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 75 INISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ + G + L G L L L GN+ G +P G L+ L L +N +G
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 134 IPPE-IGNLTGLVKINLQSNGLTGRLPAELGNL-ISLEELHLDRNRLQGAVPAGSNSGYT 191
+P + + + GL ++L N +G LP L NL SL L L N G +
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 192 ANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ +Y + TG L + S+L S+N+ G+IP L L
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-36
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ + + G + P L + L L L N L G IP LG L +L+ L L N L G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P E+ + L + L N LTG +P+ L N +L + L NRL G +P G N+
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP--KWIGRLENL 516
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDP 249
+ S+ + +G L L D + N F G+IP + N + K
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG-KIAANFIAGKRY 575
Query: 250 KQ 251
Sbjct: 576 VY 577
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 3e-35
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 75 INISGSSLKGFLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+++S ++ G + P L LQEL L N G IP L L L L N L+G
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA--GSNSGY 190
IP +G+L+ L + L N L G +P EL + +LE L LD N L G +P+ + +
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-- 490
Query: 191 TANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
N++ + S+ LTG + L L + S N F G+IP L S
Sbjct: 491 --NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 4e-34
Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 16/171 (9%)
Query: 75 INISGSSLKGFLAPEL---GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+++S +S+ G L+ L + GN + G + + L+ LD+ +N +
Sbjct: 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFS 213
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P +G+ + L +++ N L+G + L+ L++ N+ G +P
Sbjct: 214 TGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLK--- 269
Query: 192 ANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ + + TG L D S N F G++P
Sbjct: 270 -SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 9e-34
Identities = 51/224 (22%), Positives = 76/224 (33%), Gaps = 42/224 (18%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
+D + + +G + +L L+ + G + LD
Sbjct: 579 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
+ N L+G IP EIG++ L +NL N ++G +P E+G+L L L L N+L G +P
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP- 697
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGN 242
+ L+ L D S N G IP+ E P F N
Sbjct: 698 --------------------QAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
Query: 243 CLQNKDPKQRATTLCGGAPPARTRAGLSPKHQAAEDVSKHQSAS 286
LCG P L + D H S
Sbjct: 738 -----------PGLCG--YP------LPRCDPSNADGYAHHQRS 762
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 3e-33
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S ++ + P LG + LQ L + GN L G + + LK+L++ +NQ GPI
Sbjct: 205 LDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
PP L L ++L N TG +P L G +L L L N GAVP G +
Sbjct: 264 PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP--PFFGSCSL 319
Query: 194 IHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + SS N +G L + LKV D S+N F G +P+ L L +
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 7e-33
Identities = 51/188 (27%), Positives = 73/188 (38%), Gaps = 27/188 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ + + L+G + EL + L+ LIL N+L G IP L L + L N+LTG I
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG--------- 185
P IG L L + L +N +G +PAELG+ SL L L+ N G +PA
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566
Query: 186 ------------SNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIP 228
N G H + G L LS + + + G
Sbjct: 567 ANFIAGKRYVYIKNDGMKKECH-GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625
Query: 229 KCLEYLPS 236
+ S
Sbjct: 626 PTFDNNGS 633
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-31
Identities = 42/233 (18%), Positives = 81/233 (34%), Gaps = 43/233 (18%)
Query: 16 VLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKI 75
+ + E L +FK+ + +L +W++ + +PC + G+ C D+V I
Sbjct: 2 FQASPSQSLYR-EIHQLISFKDVL--PDKNLLPDWSS-NKNPCTFDGVTCR--DDKVTSI 55
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
++S L + L L L+ L L + + G +
Sbjct: 56 DLSSKPLNVGF---------------------SAVSSSLLSLTGLESLFLSNSHINGSV- 93
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
L ++L N L+G + LG+ L+ L++ N L +
Sbjct: 94 SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN-S 152
Query: 194 IHGMYASSANLTG--------LCHLSQLKVADFSYNFFVGSIP----KCLEYL 234
+ + S+ +++G +LK S N G + LE+L
Sbjct: 153 LEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFL 205
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 4e-29
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
I++S + L G + +G L L L L N+ G IP ELG + L LDL TN G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
P + +G + +N + G+ + N +E H N L+ +
Sbjct: 555 PAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610
Query: 195 HGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ +S G + + D SYN G IPK + +P
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 7e-29
Identities = 52/168 (30%), Positives = 67/168 (39%), Gaps = 24/168 (14%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGP 133
+NIS + G + P L LQ L L N G IP L G L LDL N G
Sbjct: 252 LNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+PP G+ + L + L SN +G LP + L + L+ L L N G +P
Sbjct: 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-------- 361
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
S NL+ + L D S N F G I L P + Q
Sbjct: 362 -------SLTNLS-----ASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 2e-36
Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 43/285 (15%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+F + + ++KG +G +I V L K W+ F E L +H N
Sbjct: 13 NFLTKLNENHSGELWKGRWQGN-DIVVKVL--KVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+LG C+ L+ + G+LY LH G V ++ +K + +ARG+ +LHT
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG-----AICIL 535
L P LNS +V + ED + ++ D + S ++PG + + A+
Sbjct: 130 -LEPLIPRHALNSRSVMIDEDMTARISMAD-----VKFSFQSPGRMYAPAWVAPEALQKK 183
Query: 536 PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD 593
P R D+ ++F VLL E+++ P + +L E+ V
Sbjct: 184 PEDTNRRSADM----WSFAVLLWELVTREVP--------------FADLSNMEIGMKVAL 225
Query: 594 ----PEL-KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
P + S + +++ +C+N D KRP + +LE
Sbjct: 226 EGLRPTIPPGIS----PHVSKLMKICMNEDPAKRPKFDMIVPILE 266
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 6e-28
Identities = 69/304 (22%), Positives = 121/304 (39%), Gaps = 36/304 (11%)
Query: 340 DSEILKDVVRFSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW 397
+E L ++++ D IG+ V++ G ++AV + E+ +
Sbjct: 17 TTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGS-DVAV--KILMEQDF 73
Query: 398 TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGER 456
F REVA + R+ H N +G + +V +Y S G+LY LH G R
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL--SIVTEYLSRGSLYRLLHKSGAR 131
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516
Q+ RR+ + +A+G+ YLH PP L S + + + ++ K+ DF L
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFG-----L 185
Query: 517 ARSEKNPGTLGSQGAICIL---PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN 573
+R + + A P L + + ++Y+FGV+L E+ + + P
Sbjct: 186 SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP------- 238
Query: 574 LVDWAKDYLELPEVMSYVVD----PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELC 629
W L +V++ V E+ + I E C + KRPS +
Sbjct: 239 ---WGN--LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIE---GCWTNEPWKRPSFATIM 290
Query: 630 TMLE 633
+L
Sbjct: 291 DLLR 294
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 3e-27
Identities = 58/325 (17%), Positives = 114/325 (35%), Gaps = 50/325 (15%)
Query: 348 VRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYF 405
+ + E + ++ +IG VYKG++ +AV F
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQ-------NF 52
Query: 406 QRE--VADLARINHENTGKLLGYCRESSPFTR---MLVFDYASNGTLYEHLHYGERCQVS 460
E + + + H+N + + + R +LV +Y NG+L ++L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS---LHTSD 109
Query: 461 WTRRMKIVIGIARGLKYLHTELG------PPFTISELNSSAVYLTEDFSPKLVDF----- 509
W ++ + RGL YLHTEL P + +LNS V + D + + DF
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 510 DSWKTILARSEKNPGTLGSQGAIC-----ILPSSLEARHLD---VQGNIYAFGVLLLEII 561
+ ++ E++ + G I +L ++ R + Q ++YA G++ EI
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 562 SGRPPCCKDKGN------LVDWAKDYLELPEVMSYVVD-------PELKHFSYDDLKVIC 608
+ ++ ++ V PE + ++ +
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 609 EVVNLCVNPDITKRPSMQELCTMLE 633
E + C + D R + Q +
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMA 314
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 6e-27
Identities = 31/171 (18%), Positives = 51/171 (29%), Gaps = 20/171 (11%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++S + L+ + LQ L L + I L L L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
L+ L K+ L +G+L +L+EL++ N +Q
Sbjct: 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY------- 144
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+L+ L+ D S N L L L
Sbjct: 145 -------------FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 5e-23
Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 32/180 (17%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ S+LK L L L + + L L++L + N
Sbjct: 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
P+I L L ++L L P +L SL+ L++ N +
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS-LDTFP------ 513
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPST---------SFQGNC 243
L+ L+V D+S N + S + L++ PS+ F C
Sbjct: 514 --------------YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 559
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 7e-23
Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 9/181 (4%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIG-IIPKELGLLKRLKILDLGTNQLTGP 133
++IS + + L+ L+ L + GN+ +P L+ L LDL QL
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P +L+ L +N+ N L SL+ L N + + ++
Sbjct: 486 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT-SKKQELQHFPSS 544
Query: 194 IHGMYASSANLTGLCH-------LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ + + + C + + + P + +P S C N
Sbjct: 545 LAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSLNITCQMN 604
Query: 247 K 247
K
Sbjct: 605 K 605
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-22
Identities = 38/162 (23%), Positives = 60/162 (37%), Gaps = 8/162 (4%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-G 139
S KG + T L+ L L N +I + LGL ++L+ LD + L +
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGL-EQLEHLDFQHSNLKQMSEFSVFL 418
Query: 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199
+L L+ +++ L SLE L + N Q + N+ +
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR-NLTFLDL 477
Query: 200 SSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
S L L LS L+V + S+N F + L S
Sbjct: 478 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 519
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 8e-20
Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 22/204 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTG 132
K+ ++L +G L L+EL + N + +P+ L L+ LDL +N++
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 133 PIPPEIGNLTGL----VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG--- 185
++ L + + ++L N + + I L +L L N V
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQ 222
Query: 186 --SNSGYTANIHGMYASSANLT--------GLCHLSQLKVADFSYNFFVGSIP---KCLE 232
+ + G + + NL GLC+L+ + ++++ I CL
Sbjct: 223 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT 282
Query: 233 YLPSTSFQGNCLQNKDPKQRATTL 256
+ S S ++
Sbjct: 283 NVSSFSLVSVTIERVKDFSYNFGW 306
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-17
Identities = 30/183 (16%), Positives = 48/183 (26%), Gaps = 44/183 (24%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKR--------------- 119
++ +++ + Q L L +L LKR
Sbjct: 287 FSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 344
Query: 120 ----LKILDLGTNQLT--GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHL 173
L+ LDL N L+ G T L ++L NG+ + + L LE L
Sbjct: 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDF 403
Query: 174 DRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEY 233
+ L+ L L D S+ +
Sbjct: 404 QHSNLKQMSEFSV--------------------FLSLRNLIYLDISHTHTRVAFNGIFNG 443
Query: 234 LPS 236
L S
Sbjct: 444 LSS 446
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-15
Identities = 22/136 (16%), Positives = 34/136 (25%), Gaps = 24/136 (17%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
N I L K LDL N L + L ++L +
Sbjct: 14 CMELNFYKIPD---NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG 70
Query: 161 ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSY 220
+L L L L N +Q + G+ LS L+
Sbjct: 71 AYQSLSHLSTLILTGNPIQS-LALGA--------------------FSGLSSLQKLVAVE 109
Query: 221 NFFVGSIPKCLEYLPS 236
+ +L +
Sbjct: 110 TNLASLENFPIGHLKT 125
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-26
Identities = 60/316 (18%), Positives = 125/316 (39%), Gaps = 52/316 (16%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
IG V++G +G E+AV K + + E+ + HEN
Sbjct: 46 LQESIGKGRFGEVWRGKWRGE-EVAV-----KIFSSREERSWFREAEIYQTVMLRHENIL 99
Query: 422 KLLGYC-RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLH 156
Query: 480 TELG-----PPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR---SEKNPGTLGSQGA 531
E+ P +L S + + ++ + + D LA S + +
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG-----LAVRHDSATDTIDIAPNHR 211
Query: 532 IC--------ILPSSLEARHLDV--QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581
+ +L S+ +H + + +IYA G++ EI C G D+ Y
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR----RCSIGGIHEDYQLPY 267
Query: 582 LELP-------EVMSYVVD----PEL--KHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+L E+ V + P + + S + L+V+ +++ C + R + +
Sbjct: 268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327
Query: 629 CTMLEGRIDTSISVEL 644
L ++ +++
Sbjct: 328 KKTLS-QLSQQEGIKM 342
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 53/299 (17%), Positives = 97/299 (32%), Gaps = 36/299 (12%)
Query: 349 RFSRQELEVACED--FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQ 406
QE ++ E +IG VY G G E+A+ + E F+
Sbjct: 22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLI--DIERDNEDQLKAFK 77
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV + HEN +G C ++ TLY + + + + +
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHL--AIITSLCKGRTLYSVVR-DAKIVLDVNKTRQ 134
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF--DSWKTILARSEKNPG 524
I I +G+ YLH +L S V ++ + DF S +L +
Sbjct: 135 IAQEIVKGMGYLHA---KGILHKDLKSKNV-FYDNGKVVITDFGLFSISGVLQAGRREDK 190
Query: 525 TLGSQGAIC----------ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574
G +C + + +++A G + E+ + P
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA 250
Query: 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ W P + + E+ +++ C + +RP+ +L MLE
Sbjct: 251 IIWQMGTGMKPNLSQIGMGKEIS-----------DILLFCWAFEQEERPTFTKLMDMLE 298
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-26
Identities = 21/186 (11%), Positives = 54/186 (29%), Gaps = 34/186 (18%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
++K I+ + + + ++ NN+ + K + L +L+ +G +
Sbjct: 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFV-SKAVMRLTKLRQFYMGNSPF 218
Query: 131 TGP-------------------IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEEL 171
+ NL L + + + +LP L L ++ +
Sbjct: 219 VAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278
Query: 172 HLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYN-FFVGSIPKC 230
++ NR + L ++++ YN +
Sbjct: 279 NVACNRGISGEQLKDDWQ-------------ALADAPVGEKIQIIYIGYNNLKTFPVETS 325
Query: 231 LEYLPS 236
L+ +
Sbjct: 326 LQKMKK 331
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 8e-26
Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 17/163 (10%)
Query: 88 PELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
+ + +Q + + NNL + L +K+L +L+ NQL G P G+ L
Sbjct: 299 ADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG-KLPAFGSEIKLAS 357
Query: 147 INLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
+NL N +T +PA G +E L N+L+ +P ++ + + + S +
Sbjct: 358 LNLAYNQITE-IPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMSAIDFSYNEIG 415
Query: 206 G------------LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + S N +
Sbjct: 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSP 458
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 9e-24
Identities = 26/172 (15%), Positives = 52/172 (30%), Gaps = 25/172 (14%)
Query: 89 ELGLLTYLQELILHGNNLIGI-------IPKELGLLKRLKILDLGTNQLTGPIPPEIGNL 141
+ ++ + + N + + + + ++L NQ++
Sbjct: 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456
Query: 142 TGLVKINLQSNGLTG-------RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ L INL N LT N L + L N+L + + +
Sbjct: 457 SPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYL 515
Query: 195 HGMYASSANLTGL----CHLSQLKV------ADFSYNFFVGSIPKCLEYLPS 236
G+ S + + + S LK D N + P+ + PS
Sbjct: 516 VGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 5e-23
Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 22/183 (12%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTG 132
+N++ + + A G ++ L N L I + + + +D N++
Sbjct: 357 SLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGS 416
Query: 133 -------PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
P+ P + INL +N ++ L ++L N L +P
Sbjct: 417 VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-IPKN 475
Query: 186 SNSGYTANIHGM------YASSANLTGL------CHLSQLKVADFSYNFFVGSIPKCLEY 233
S N LT L L L D SYN F P
Sbjct: 476 SLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSF-SKFPTQPLN 534
Query: 234 LPS 236
+
Sbjct: 535 SST 537
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 2e-21
Identities = 32/192 (16%), Positives = 52/192 (27%), Gaps = 36/192 (18%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-------IPKELGLLKRLKILDLG 126
IN+S + + F + L + L GN L I + L +DL
Sbjct: 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496
Query: 127 TNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
N+LT + + L LV I+L N + P + N +L+ + R
Sbjct: 497 FNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRD------ 548
Query: 185 GSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
A + L N K +
Sbjct: 549 --------------AQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDI 594
Query: 240 QGNCLQNKDPKQ 251
+ N + D
Sbjct: 595 KDNPNISIDLSY 606
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 5e-20
Identities = 28/163 (17%), Positives = 50/163 (30%), Gaps = 17/163 (10%)
Query: 74 KINISGSSLKGF-------LAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDL 125
IN+ G+ L L + L N L + L L +DL
Sbjct: 461 SINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDL 520
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQ------SNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + P + N + L ++ N P + SL +L + N ++
Sbjct: 521 SYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR 579
Query: 180 GAVPAGSNSG-YTANIHGMYASSANLTGLCHLSQLKVADFSYN 221
V +I S +L+ +C + + Y+
Sbjct: 580 K-VNEKITPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYD 621
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 3e-17
Identities = 39/261 (14%), Positives = 70/261 (26%), Gaps = 61/261 (23%)
Query: 22 NAFATNEFWALTTFKEAIYEDPHLVLSN-WNALDADPCHWTGIACSDARDRVLKINISGS 80
NA + + + A Y +L L W+AL+ G
Sbjct: 10 NALTDDAIVPIKLSRTAEYIKDYLALKEIWDALNGKNWSQQGFGT--------------- 54
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN 140
+ +EL + G G+ L R+ L L +G +P IG
Sbjct: 55 -------QPGANWNFNKELDMWGA-QPGV---SLNSNGRVTGLSLEGFGASGRVPDAIGQ 103
Query: 141 LTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHG 196
LT L + L S+G P + +S E+ R Q +++
Sbjct: 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIK 163
Query: 197 MYASSANLTG----------------------------LCHLSQLKVADFSYNFFVGSIP 228
+S + L++L+ + FV
Sbjct: 164 DCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENI 223
Query: 229 KCLEYLPSTSFQGNCLQNKDP 249
E + + + +
Sbjct: 224 --CEAWENENSEYAQQYKTED 242
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-16
Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGT 127
I++S +S + + L+ GN + P+ + L L L +G+
Sbjct: 517 GIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGS 575
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + + +I + ++++ N + + I L ++ Q
Sbjct: 576 NDIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-25
Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 12/186 (6%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+N++ + L+ A + L L + N + + P+ L LK+L+L N+L+
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 89
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
T L +++L SN + +L L L N L G+ N+
Sbjct: 90 DKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS-TKLGTQVQLE-NL 147
Query: 195 HGMYASSANLTGL-------CHLSQLKVADFSYNFFVGSIPKCLEYLPS---TSFQGNCL 244
+ S+ + L S LK + S N P C + L
Sbjct: 148 QELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207
Query: 245 QNKDPK 250
+
Sbjct: 208 GPSLTE 213
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 3e-23
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 13/189 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ +S++ L L L N L L+ L+ L L N++
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160
Query: 134 IPPEIG--NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG-SNSGY 190
E+ + L K+ L SN + P + L L L+ +L ++
Sbjct: 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELA 220
Query: 191 TANIHGMYASSANLTGL-------CHLSQLKVADFSYNFFVGSIPKCLEYLPST---SFQ 240
+I + S++ L+ + L + D SYN +LP +
Sbjct: 221 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 280
Query: 241 GNCLQNKDP 249
N +Q+
Sbjct: 281 YNNIQHLFS 289
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 1e-22
Identities = 33/176 (18%), Positives = 54/176 (30%), Gaps = 14/176 (7%)
Query: 75 INISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
+++ + + L E L + E+ L N + + L+ L+ L L L
Sbjct: 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV 469
Query: 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P L L ++L +N + L L LE L L N L + G
Sbjct: 470 DSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPI 529
Query: 192 ANIHGM------YASSANLTGLC-----HLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ G+ S + L +LK+ D N S
Sbjct: 530 YFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVS 585
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 3e-21
Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 12/169 (7%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L T + L L N L + +L LD+G N ++ P L L +NLQ
Sbjct: 22 DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207
N L+ +L ELHL N +Q + N+ + S L+
Sbjct: 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQK-NLITLDLSHNGLSSTKLG 139
Query: 208 --CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ-----GNCLQNKDP 249
L L+ S N + L+ ++S + N ++ P
Sbjct: 140 TQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 188
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 5e-20
Identities = 32/145 (22%), Positives = 47/145 (32%), Gaps = 20/145 (13%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVKINLQS 151
+ L L L N + I L L++LDLG N++ + E L + +I L
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS 211
N + SL+ L L R L+ V + + L
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKN-VDSSPSP------------------FQPLR 480
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPS 236
L + D S N LE L
Sbjct: 481 NLTILDLSNNNIANINDDMLEGLEK 505
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-19
Identities = 37/213 (17%), Positives = 66/213 (30%), Gaps = 25/213 (11%)
Query: 44 HLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLL--TYLQELIL 101
L L+N L + ++ R L ++S S L L T L L L
Sbjct: 199 GLFLNN-VQLGPSLTEKLCLELANTSIRNL--SLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 102 HGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL--- 158
NNL + L +L+ L N + + L + +NL+ + +
Sbjct: 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315
Query: 159 ------PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA---------NIHGMYASSAN 203
L LE L+++ N + G + + +G ++
Sbjct: 316 SLPKIDDFSFQWLKCLEHLNMEDNDIPG-IKSNMFTGLINLKYLSLSNSFTSLRTLTNET 374
Query: 204 LTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L H S L + + + N +L
Sbjct: 375 FVSLAH-SPLHILNLTKNKISKIESDAFSWLGH 406
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-18
Identities = 37/172 (21%), Positives = 54/172 (31%), Gaps = 31/172 (18%)
Query: 75 INISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT- 131
+ + +LK L L L L NN+ I L L++L+ILDL N L
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR 518
Query: 132 -------GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
G + L+ L +NL+SNG +L L+ + L N L +PA
Sbjct: 519 LWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNT-LPA 577
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ LK + N K
Sbjct: 578 SV--------------------FNNQVSLKSLNLQKNLITSVEKKVFGPAFR 609
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 2e-18
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 12/175 (6%)
Query: 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT- 131
K +IS +SL L L+ L + N++ GI L LK L L + +
Sbjct: 308 TKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367
Query: 132 GPIPPEIG---NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
+ E + L +NL N ++ L LE L L N + +
Sbjct: 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWR 427
Query: 189 GYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF--VGSIPKCLEYLPS 236
G NI +Y S L + L+ V S P + L +
Sbjct: 428 GLE-NIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-17
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 9/144 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNL--------IGIIPKELGLLKRLKILDL 125
+++S +++ L L L+ L L NNL G L L L IL+L
Sbjct: 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNL 543
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+N +L L I+L N L + N +SL+ L+L +N + V
Sbjct: 544 ESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS-VEKK 602
Query: 186 SNSGYTANIHGMYASSANLTGLCH 209
N+ + C
Sbjct: 603 VFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 2e-11
Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 28/144 (19%)
Query: 119 RLKILDL---------------------GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
++ D NQL + L +++ N ++
Sbjct: 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKL 64
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQ 212
P L L+ L+L N L + + + T N+ ++ S ++ +
Sbjct: 65 EPELCQKLPMLKVLNLQHNELSQ-LSDKTFAFCT-NLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 213 LKVADFSYNFFVGSIPKCLEYLPS 236
L D S+N + L +
Sbjct: 123 LITLDLSHNGLSSTKLGTQVQLEN 146
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-09
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 1/109 (0%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+N+ + L L+ + L NNL + LK L+L N +T
Sbjct: 541 LNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600
Query: 135 PPEIG-NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV 182
G L +++++ N + + + E H + L
Sbjct: 601 KKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 6e-25
Identities = 62/286 (21%), Positives = 101/286 (35%), Gaps = 39/286 (13%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
IIG VY+ G E+AV + + ++E A + H N
Sbjct: 10 TLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L G C + LV ++A G L L ++ + + IARG+ YLH
Sbjct: 69 IALRGVCLKEPNL--CLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHD 123
Query: 481 ELGPPFTISELNSSAVYLTEDFSP--------KLVDFDSWKTILARSEKNPGTLGSQGAI 532
E P +L SS + + + K+ DF LAR + + GA
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG-----LAREWHRTTKMSAAGAY 178
Query: 533 C-ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591
+ P + A +++++GVLL E+++G P + ++ V V
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP----------F--RGIDGLAVAYGV 226
Query: 592 VD----PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ + + E C NPD RPS + L
Sbjct: 227 AMNKLALPIPSTCPEPFAKLME---DCWNPDPHSRPSFTNILDQLT 269
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 8e-25
Identities = 63/295 (21%), Positives = 112/295 (37%), Gaps = 53/295 (17%)
Query: 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAV---ISLCIKEEHWTGYLELYFQREVADLARIN 416
++ IG LV+KG + +A+ I + E FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G P +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHN--PP--RMVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPPFTISELNSSAVYLTE-----DFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
Y+ + PP +L S ++L K+ DF L++ + G G
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----LSQ-QSVHSVSGLLGN 189
Query: 532 ICIL-PSSLEARHL------DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--- 581
+ P ++ A D Y+F ++L I++G P + + +
Sbjct: 190 FQWMAPETIGAEEESYTEKADT----YSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 582 ---LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+PE P L+ V+ LC + D KRP + L
Sbjct: 246 GLRPTIPE----DCPPRLR-----------NVIELCWSGDPKKRPHFSYIVKELS 285
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 57/316 (18%), Positives = 112/316 (35%), Gaps = 52/316 (16%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
IG V+ G +G ++AV K T + + E+ + HEN
Sbjct: 41 MVKQIGKGRYGEVWMGKWRGE-KVAV-----KVFFTTEEASWFRETEIYQTVLMRHENIL 94
Query: 422 KLLGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ + + L+ DY NG+LY++L + +K+ GL +LH
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLK---STTLDAKSMLKLAYSSVSGLCHLH 151
Query: 480 TELGPPFTISE-----LNSSAVYLTEDFSPKLVDFDSWKTILAR---SEKNPGTLGSQGA 531
TE+ L S + + ++ + + D LA S+ N +
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG-----LAVKFISDTNEVDIPPNTR 206
Query: 532 IC--------ILPSSLEARHLDV--QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581
+ +L SL H ++Y+FG++L E+ C G + ++ Y
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVAR----RCVSGGIVEEYQLPY 262
Query: 582 LELP-------EVMSYVVD----PELKHFSYDD--LKVICEVVNLCVNPDITKRPSMQEL 628
+L ++ V P + D L+ + +++ C + R + +
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
Query: 629 CTMLEGRIDTSISVEL 644
L ++ S ++L
Sbjct: 323 KKTLA-KMSESQDIKL 337
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 1e-24
Identities = 60/280 (21%), Positives = 115/280 (41%), Gaps = 38/280 (13%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ ++G +V K + ++A+ + + E F E+ L+R+NH N
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESE------RKAFIVELRQLSRVNHPNI 63
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLH 479
KL G C P LV +YA G+LY LH E + M + ++G+ YLH
Sbjct: 64 VKLYGACLN--PV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 480 TELGPPFTISELNSSAVYLTEDFS-PKLVDFDSWKTILARSEKNPGTLGSQGAICIL-PS 537
+ +L + L + K+ DF A + T ++G+ + P
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMT-NNKGSAAWMAPE 173
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD---- 593
E + + +++++G++L E+I+ R P + + + + V
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKP----------F-DEIGGPAFRIMWAVHNGTR 222
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
P L + K I ++ C + D ++RPSM+E+ ++
Sbjct: 223 PPL---IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 56/305 (18%), Positives = 111/305 (36%), Gaps = 51/305 (16%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
+G V++G+ +G +AV K + + E+ + + HEN
Sbjct: 12 LLECVGKGRYGEVWRGSWQGE-NVAV-----KIFSSRDEKSWFRETELYNTVMLRHENIL 65
Query: 422 KLLGYCRES--SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ S S L+ Y G+LY++L + ++IV+ IA GL +LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 480 TELGPPFTISE-----LNSSAVYLTEDFSPKLVDFDSWKTILAR---SEKNPGTLGSQGA 531
E+ L S + + ++ + D LA N +G+
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG-----LAVMHSQSTNQLDVGNNPR 177
Query: 532 IC--------ILPSSLEARHLDV--QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581
+ +L +++ D + +I+AFG++L E+ G + D+ +
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR----RMVSNGIVEDYKPPF 233
Query: 582 LELP------EVMSYVVD-----PEL--KHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
++ E M VV P + + FS L + +++ C + + R + +
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Query: 629 CTMLE 633
L
Sbjct: 294 KKTLT 298
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 3e-23
Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 43/300 (14%)
Query: 349 RFSRQELEVACEDFSNI-----IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
R + + E+ I IGS VYKG G ++AV L T
Sbjct: 13 RDAADDWEI---PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKML--NVTAPTPQQLQ 65
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTR 463
F+ EV L + H N +GY +V + +LY HLH E + +
Sbjct: 66 AFKNEVGVLRKTRHVNILLFMGYSTA-PQL--AIVTQWCEGSSLYHHLHASET-KFEMKK 121
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP 523
+ I ARG+ YLH +L S+ ++L ED + K+ DF T +R +
Sbjct: 122 LIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDF-GLATEKSRWSGSH 177
Query: 524 GTLGSQGAIC-----ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G+I ++ ++ Q ++YAFG++L E+++G+ P ++
Sbjct: 178 QFEQLSGSILWMAPEVI-RMQDSNPYSFQSDVYAFGIVLYELMTGQLP----------YS 226
Query: 579 KDYLELPEVMSYVVD-----PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ + + +V P+L + K + ++ C+ +RPS + +E
Sbjct: 227 N--INNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 7e-22
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 27/174 (15%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
+ E L LQ L L + + P + L+ LK L + + L+ + P I +L L
Sbjct: 175 ASGEHQGLVNLQSLRLEWTGIRSL-PASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHL-DRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+++L+ P G L+ L L D + L +P
Sbjct: 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLD------------------- 272
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS--TSFQGNCLQNKDPKQRATTL 256
+ L+QL+ D + +P + LP+ LQ + + R
Sbjct: 273 --IHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 8e-21
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL-GTNQLTGPI 134
I S L L P + L L+EL L G + P G LK L L + L +
Sbjct: 212 KIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-L 269
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
P +I LT L K++L+ RLP+ + L + + + +
Sbjct: 270 PLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 3e-20
Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 36/173 (20%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL-GTNQLTG 132
+ I + L L + L+ L L N L +P + L RL+ L + +LT
Sbjct: 108 HMTIDAAGLME-LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTE 165
Query: 133 PIPPEIGN---------LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
+P + + L L + L+ G+ LPA + NL +L+ L + + L A+
Sbjct: 166 -LPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALG 222
Query: 184 AGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ HL +L+ D + + P
Sbjct: 223 P---------------------AIHHLPKLEELDLRGCTALRNYPPIFGGRAP 254
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 9e-13
Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 31/177 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILD--------------------LGTNQLTG 132
+ + L G+ + L +R D L
Sbjct: 11 SSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKA 70
Query: 133 PIPPEIGNLT--GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ + T G V + L+S L + P + L L+ + +D L +P
Sbjct: 71 -TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELP--DTMQQ 125
Query: 191 TANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
A + + + L L L++L+ + +P+ L ++
Sbjct: 126 FAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 17/93 (18%), Positives = 32/93 (34%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
++ G + P G L+ LIL + + +P ++ L +L+ LDL +P
Sbjct: 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168
I L I + + +
Sbjct: 295 SLIAQLPANCIILVPPHLQAQLDQHRPVARPAE 327
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 1e-20
Identities = 58/301 (19%), Positives = 98/301 (32%), Gaps = 68/301 (22%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
K T + E+ V+ I+ + F +EV + + H N K +G +
Sbjct: 26 AIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISE--- 490
+ +Y GTL + + Q W++R+ IA G+ YLH S
Sbjct: 83 --NFITEYIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLH---------SMNII 130
Query: 491 ---LNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHL--- 544
LNS + E+ + + DF LAR + T P + +
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFG-----LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 545 ------------------DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY---LE 583
DV ++FG++L EII +D+ + L+
Sbjct: 186 PYWMAPEMINGRSYDEKVDV----FSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241
Query: 584 LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVE 643
+ P + C + D KRPS +L LE + ++
Sbjct: 242 RYCPPN--CPPSFF-----------PITVRCCDLDPEKRPSFVKLEHWLE-TLRMHLAGH 287
Query: 644 L 644
L
Sbjct: 288 L 288
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 3e-20
Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 20/167 (11%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
I++S + LK + + LQ L L + I K L L L L N +
Sbjct: 36 NIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSF 95
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P LT L + L +G LI+L++L++ N +
Sbjct: 96 SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY------- 148
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+L+ L D SYN+ L++L
Sbjct: 149 -------------FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQV 182
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 5e-17
Identities = 26/107 (24%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGP 133
++IS ++ K LT L L + GN+ L LDL QL
Sbjct: 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQI 488
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
L L +N+ N L + L SL L NR++
Sbjct: 489 SWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-16
Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 1/104 (0%)
Query: 76 NISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++G+S K T L L L L I L RL++L++ N L
Sbjct: 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLD 513
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
L L ++ N + SL +L N +
Sbjct: 514 SSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 3e-16
Identities = 28/165 (16%), Positives = 43/165 (26%), Gaps = 23/165 (13%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
++ S+LK L L L + N L L L + N
Sbjct: 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD 462
Query: 133 PIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ N T L ++L L L L+ L++ N L + +
Sbjct: 463 NTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF-LDSSH----- 516
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D S+N S + S
Sbjct: 517 ---------------YNQLYSLSTLDCSFNRIETSKGILQHFPKS 546
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-14
Identities = 31/188 (16%), Positives = 57/188 (30%), Gaps = 32/188 (17%)
Query: 80 SSLKGFLAPELGLLTYLQELILHGN-------------------------NLIGIIPKEL 114
+ KG ++ + L L L L N N I+
Sbjct: 336 TMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANF 395
Query: 115 GLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHL 173
L+ L+ LD + L +L L+ +++ L SL L +
Sbjct: 396 MGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455
Query: 174 DRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC-----HLSQLKVADFSYNFFVGSIP 228
N + + + T N+ + S L + L +L++ + S+N +
Sbjct: 456 AGNSFKDNTLSNVFANTT-NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDS 514
Query: 229 KCLEYLPS 236
L S
Sbjct: 515 SHYNQLYS 522
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 28/169 (16%), Positives = 54/169 (31%), Gaps = 20/169 (11%)
Query: 74 KINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKI----LDLGTN 128
K+N++ + + L LT L + L N + I +L L+ LD+ N
Sbjct: 132 KLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191
Query: 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSN 187
+ I + L ++ L+ N + + L NL L L +
Sbjct: 192 PIDF-IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD------- 243
Query: 188 SGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + + GLC ++ + +Y L +
Sbjct: 244 -----ERNLEIFEPSIMEGLCDVTIDEF-RLTYTNDFSDDIVKFHCLAN 286
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 32/193 (16%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-------KELGL------- 116
+ + ++ ++ + L + + L G ++ + + L +
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQ 321
Query: 117 -----LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT--GRLPAELGNLISLE 169
L LK L L N+ + I + L L ++L N L+ G SL
Sbjct: 322 FPTLDLPFLKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLR 379
Query: 170 ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------CHLSQLKVADFSYNFF 223
L L N + + + L + L +L D SY
Sbjct: 380 HLDLSFNGAIIMSANFMGL---EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436
Query: 224 VGSIPKCLEYLPS 236
L S
Sbjct: 437 KIDFDGIFLGLTS 449
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 4e-10
Identities = 18/78 (23%), Positives = 28/78 (35%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++S L+ L LQ L + NNL+ + L L LD N++
Sbjct: 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSK 537
Query: 135 PPEIGNLTGLVKINLQSN 152
L NL +N
Sbjct: 538 GILQHFPKSLAFFNLTNN 555
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 6e-07
Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 20/178 (11%)
Query: 75 INISGSSLKGFLAPELGLLTYL----QELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
+++S + ++ +L L L + N + I + +K L L L N
Sbjct: 158 VDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIK-LHELTLRGNFN 216
Query: 131 TGPIPPE-IGNLTGLVKINLQSNGLTGRL------PAELGNLISLEELHLDRNRLQGAVP 183
+ I + NL GL L P+ + L +
Sbjct: 217 SSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSD 276
Query: 184 AGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIP----KCLEYL 234
AN+ M + ++ L + + P L+ L
Sbjct: 277 DIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSL 333
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 11/58 (18%), Positives = 19/58 (32%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+N+S ++L + L L L N + K L +L N +
Sbjct: 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 5e-20
Identities = 26/170 (15%), Positives = 42/170 (24%), Gaps = 26/170 (15%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT---- 131
I + + + L N + + + + L N +T
Sbjct: 655 KIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPE 714
Query: 132 ---GPIPPEIGNLTGLVKINLQSNGLTGRLPAEL--GNLISLEELHLDRNRLQGAVPAGS 186
P N L I+L+ N LT L + L L + + N P
Sbjct: 715 NSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FP--- 769
Query: 187 NSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
N + L D N + P + PS
Sbjct: 770 ------------TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 6e-20
Identities = 26/197 (13%), Positives = 58/197 (29%), Gaps = 28/197 (14%)
Query: 44 HLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHG 103
+ S N + ++ + + + +S + ++ F + + +IL
Sbjct: 648 SVDFSY-NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSN 706
Query: 104 NNL-------IGIIPKELGLLKRLKILDLGTNQLTGPIPPEI--GNLTGLVKINLQSNGL 154
N + + L +DL N+LT + + L L +++ N
Sbjct: 707 NLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCF 765
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLK 214
+ P + N L+ + R A N I + + + L
Sbjct: 766 SS-FPTQPLNSSQLKAFGIRHQRD-----AEGN-----RILRQWPTG-----ITTCPSLI 809
Query: 215 VADFSYNFFVGSIPKCL 231
N + + L
Sbjct: 810 QLQIGSNDI-RKVDEKL 825
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 7e-20
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 19/164 (11%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
+ +I + + ++ + LT LQ + + + +
Sbjct: 426 KDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED-----ANSDYAKQ 479
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS-- 188
NL L + L + +LP L +L L+ L++ NR A ++
Sbjct: 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539
Query: 189 -----GYTANIHGMYASSANLTG------LCHLSQLKVADFSYN 221
I Y NL L + +L + D +N
Sbjct: 540 LADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHN 583
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 84.2 bits (208), Expect = 6e-17
Identities = 31/191 (16%), Positives = 49/191 (25%), Gaps = 44/191 (23%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVK 146
G L +L L N + I +++ L N+L P ++ +
Sbjct: 589 EAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGS 648
Query: 147 INLQSNGLTGRLPAELG------NLISLEELHLDRNRLQG-------------------- 180
++ N + + I+ + L N +Q
Sbjct: 649 VDFSYNKIGS-EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNN 707
Query: 181 ---AVPAGSNSGYTANIHGMYA------SSANLTGL------CHLSQLKVADFSYNFFVG 225
++P S N Y LT L L L D SYN F
Sbjct: 708 LMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCF-S 766
Query: 226 SIPKCLEYLPS 236
S P
Sbjct: 767 SFPTQPLNSSQ 777
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 1e-16
Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 13/199 (6%)
Query: 41 EDPHLVLSNWNALDADPCHWTGIACSDARDRV-LKINISGSSLKGFLAPELGLLTYLQEL 99
+D + + W ALD + ++ + N +L + L
Sbjct: 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGL 328
Query: 100 ILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP 159
L G G +P +G L LK+L GT+ T + + +
Sbjct: 329 SLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYK 388
Query: 160 AE-LGNLISLEELHLDRNRLQ-----GAVPAGSNSGYTANIHGMYASSANLTGL----CH 209
L L L ++ + + S G + +T +
Sbjct: 389 KMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGN--LTNRITFISKAIQR 446
Query: 210 LSQLKVADFSYNFFVGSIP 228
L++L++ F+ + F
Sbjct: 447 LTKLQIIYFANSPFTYDNI 465
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 4e-12
Identities = 14/112 (12%), Positives = 36/112 (32%), Gaps = 10/112 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQEL------ILHGNNLIGIIPKELGLLKRLKILDLGT 127
+++S + + + L+ GN ++ P + L L +G+
Sbjct: 757 NMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGS 815
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + + ++ L +++ N + I L ++ Q
Sbjct: 816 NDIRK-VDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 2e-11
Identities = 18/141 (12%), Positives = 44/141 (31%), Gaps = 8/141 (5%)
Query: 104 NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELG 163
+ +L R+ L L G +P IG LT L ++ ++ T
Sbjct: 309 DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGD 368
Query: 164 NLISLEELHLDRNRLQGAVPAG-----SNSGYTANIHGMYASSANLTGLCHLSQLKVADF 218
++ + ++R++ + + + + + S++ + D
Sbjct: 369 EELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDT 428
Query: 219 SY---NFFVGSIPKCLEYLPS 236
+ I K ++ L
Sbjct: 429 QIGNLTNRITFISKAIQRLTK 449
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 5e-19
Identities = 32/165 (19%), Positives = 46/165 (27%), Gaps = 21/165 (12%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ S + L L L L L + I RL L L N L
Sbjct: 38 LEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMA 97
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ L + G++ L N +LE L+L N +
Sbjct: 98 ETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI---------------- 141
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSF 239
SS L +LKV DF N + + L +
Sbjct: 142 -----SSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATN 181
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 6e-19
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 6/172 (3%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ ++ + L L L+ L + I L K L+ L LG+N ++
Sbjct: 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIK 145
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE--ELHLDRNRLQGAVPAGSNSGY-- 190
P+ L ++ Q+N + ++ +L L+L+ N + G P +S
Sbjct: 146 LPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQ 205
Query: 191 TANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
+ N G GL + L + F P E L S +
Sbjct: 206 SLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-18
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 7/165 (4%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130
V IN+ + + LQEL L + + +P L L LK L L N+
Sbjct: 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATH-LSELPSGLVGLSTLKKLVLSANKF 313
Query: 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSG 189
N L ++++ N L L NL +L EL L + ++ +
Sbjct: 314 ENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373
Query: 190 YTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPK 229
+++ + S L QL++ D ++ +
Sbjct: 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQ 418
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 6e-17
Identities = 31/173 (17%), Positives = 53/173 (30%), Gaps = 9/173 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLT- 131
K+ +S + + L L + GN + L L+ L+ LDL + +
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 132 -GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
++ NL+ L +NL N LE L L RL+
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424
Query: 191 TANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ + S + L L L+ + N F + L +
Sbjct: 425 H-LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLG 476
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 9e-16
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 8/154 (5%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++ + LK A L L+ L L + L + L L+ L+L N
Sbjct: 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464
Query: 134 I---PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ L L + L L+ +L + + L NRL + S
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHL 523
Query: 191 TA---NIHGMYASSANLTGLCHLSQLKVADFSYN 221
N+ + S + L LSQ + + N
Sbjct: 524 KGIYLNLASNHISIILPSLLPILSQQRTINLRQN 557
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 1e-15
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 76 NISGSSLKGF---LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
N+ G+ L L L+ L+L +L I LK + +DL N+LT
Sbjct: 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
+ +L G+ +NL SN ++ LP+ L L ++L +N L
Sbjct: 515 SSIEALSHLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 4e-15
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 11/172 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKI--LDLGTNQLT 131
+ + + + P+ L+ L N + + +++ L++ L+L N +
Sbjct: 133 SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN--LISLEELHLDRNRLQGAVPAGSNSG 189
G I P + +N + L N + SL + + PA
Sbjct: 193 G-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251
Query: 190 YTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ + + S L+ D + +P L L +
Sbjct: 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLST 302
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 3e-13
Identities = 19/140 (13%), Positives = 30/140 (21%), Gaps = 24/140 (17%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTG 156
+ L I L + L+ N L L L ++L +
Sbjct: 15 KTYNCENLGLNEIPG---TLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 157 RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVA 216
+ L+ L L N L + + L LK
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLIF-MAETA--------------------LSGPKALKHL 110
Query: 217 DFSYNFFVGSIPKCLEYLPS 236
F L +
Sbjct: 111 FFIQTGISSIDFIPLHNQKT 130
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 8e-08
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ +S L L + + L N L + L LK + L+L +N ++
Sbjct: 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538
Query: 134 IPPEIGNLTGLVKINLQSN 152
+P + L+ INL+ N
Sbjct: 539 LPSLLPILSQQRTINLRQN 557
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 6e-19
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 13/152 (8%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ LT L L L+ N + I P L L L NQ+T P + N+T L +
Sbjct: 171 TPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANL 204
+ +N +T + L NL L L + N++ + + + S +++
Sbjct: 227 KIGNNKITD--LSPLANLSQLTWLEIGTNQISDINAVKDLT----KLKMLNVGSNQISDI 280
Query: 205 TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L +LSQL + N + + L +
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 83.7 bits (208), Expect = 1e-17
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 29/148 (19%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ I + + L L+ L L + N + I + L +LK+L++G+NQ++
Sbjct: 225 SLKIGNNKITDL--SPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI 280
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ NL+ L + L +N L +G L +L L L +N +
Sbjct: 281 --SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT-------------- 324
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYN 221
++ L LS++ ADF+
Sbjct: 325 ---------DIRPLASLSKMDSADFANQ 343
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 2e-17
Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 14/151 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ ++ ++ L LT + L L N+ + + L + L L + +++
Sbjct: 114 ELYLNEDNISDI--SPLANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDV 170
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P I NLT L ++L N + + L +L SL N++ P + +
Sbjct: 171 TP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITPVANMT----R 222
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
++ + + +T L +LSQL + N
Sbjct: 223 LNSLKIGNNKITDLSPLANLSQLTWLEIGTN 253
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 5e-16
Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 32/165 (19%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
++ + +S+ L + +L++ G + I + + L L+ L+L NQ+T
Sbjct: 24 GIRAVLQKASVTDV--VTQEELESITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQIT 79
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P + NL L + + +N +T + L NL +L EL+L+ + +
Sbjct: 80 DISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISD----------- 124
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
++ L +L+++ + N + S L +
Sbjct: 125 ------------ISPLANLTKMYSLNLGANHNL-SDLSPLSNMTG 156
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-14
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ LT L+ L + N + I L L +L L L NQL IG LT L +
Sbjct: 259 NAVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L N +T + L +L ++ ++
Sbjct: 317 FLSQNHITD-IRP-LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 2e-11
Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 13/129 (10%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
L + I P L L +T + L + K+ + +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTGLCHLSQ 212
+ L +LE L+L+ N++ P + + +Y + +++ L +L+
Sbjct: 58 S--IQGIEYLTNLEYLNLNGNQITDISPLSNLV----KLTNLYIGTNKITDISALQNLTN 111
Query: 213 LKVADFSYN 221
L+ + +
Sbjct: 112 LRELYLNED 120
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 7e-10
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+N+ + + L L+ L L L+ N L + +G L L L L N +T
Sbjct: 269 MLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326
Query: 134 IPPEIGNLTGLVKINLQSNGLT 155
P + +L+ + + + +
Sbjct: 327 RP--LASLSKMDSADFANQVIK 346
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 8e-19
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 25/175 (14%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ SSLK LA ++EL L GN L I +L +L++L+L +N L
Sbjct: 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE- 72
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
++ +L+ L ++L +N + EL S+E LH N + V
Sbjct: 73 -TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSRGQ----G 121
Query: 194 IHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
+Y ++ +T L S+++ D N ++ + +
Sbjct: 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE--------IDTVNFAELAASS 168
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 5e-17
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 13/153 (8%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
EL + ++ L NN+ + + K + L N++T + G + + ++
Sbjct: 94 ELLVGPSIETLHAANNNISRV---SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150
Query: 149 LQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-- 205
L+ N + + +LE L+L N + V A + + SS L
Sbjct: 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVV---FAKLKTLDLSSNKLAFM 206
Query: 206 --GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + N V I K L + +
Sbjct: 207 GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 5e-16
Identities = 24/149 (16%), Positives = 45/149 (30%), Gaps = 36/149 (24%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ + ++L + +K LDL N L+ ++ T L +NL SN
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
L +L +L +L L L+ N + L
Sbjct: 69 VLYE--TLDLESLSTLRTLDLNNNY--------------------------VQELLVGPS 100
Query: 213 LKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
++ + N + + + QG
Sbjct: 101 IETLHAANN--------NISRVSCSRGQG 121
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 3e-12
Identities = 21/137 (15%), Positives = 36/137 (26%), Gaps = 18/137 (13%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L+ L L N L + E + + L N+L I + L
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242
Query: 148 NLQSNGLT-GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+L+ NG G L ++ + + + G +
Sbjct: 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK---------------KLTGQNEEECTVPT 287
Query: 207 LCHLSQLKVADFSYNFF 223
L H D F
Sbjct: 288 LGHYGAYCCEDLPAPFA 304
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGL 144
+ PE + + L N L+ +I K L + L+ DL N G + +
Sbjct: 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264
Query: 145 VKINLQSNGLTGRLPAELGNLISLEEL 171
+ Q+ E + +L
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTLGHY 291
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 2e-18
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 25/173 (14%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
++ SSLK LA ++EL L GN L I +L +L++L+L +N L
Sbjct: 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--T 73
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH 195
++ +L+ L ++L +N + EL S+E LH N + V
Sbjct: 74 LDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSRGQ----GKK 123
Query: 196 GMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNC 243
+Y ++ +T L S+++ D N ++ + +
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNE--------IDTVNFAELAASS 168
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 8e-17
Identities = 30/183 (16%), Positives = 61/183 (33%), Gaps = 25/183 (13%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-----------------KELGL 116
++++SG+ L A +L T L+ L L N L + +EL +
Sbjct: 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLV 97
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
++ L N ++ + G I L +N +T + G ++ L L N
Sbjct: 98 GPSIETLHAANNNISR-VSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154
Query: 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIPKCLEY 233
+ V + + + + + + ++LK D S N + +
Sbjct: 155 EID-TVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQS 212
Query: 234 LPS 236
Sbjct: 213 AAG 215
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 4e-16
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 36/151 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
+ + ++L + +K LDL N L+ ++ T L +NL
Sbjct: 7 QNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLS 66
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
SN L +L +L +L L L+ N + L
Sbjct: 67 SNVLYE--TLDLESLSTLRTLDLNNNY--------------------------VQELLVG 98
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
++ + N + + + QG
Sbjct: 99 PSIETLHAANN--------NISRVSCSRGQG 121
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 5e-13
Identities = 25/161 (15%), Positives = 42/161 (26%), Gaps = 7/161 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L+ L L N L + E + + L N+L I + L
Sbjct: 185 KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242
Query: 148 NLQSNGL-TGRLPAELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYASSANLT 205
+L+ NG G L ++ + + L G +
Sbjct: 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAP 302
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L LK + + GS E L +
Sbjct: 303 FADRLIALKRKEHALLSGQGSE---TERLECERENQARQRE 340
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 5e-08
Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 7/157 (4%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL-TGPIPPEIGNLTGL 144
+ PE + + L N L+ +I K L + L+ DL N G + +
Sbjct: 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264
Query: 145 VKINLQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN 203
+ Q+ LTG+ E L + + +
Sbjct: 265 QTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSE 324
Query: 204 LTGL----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L + ++ + D + I + +
Sbjct: 325 TERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 361
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 10/110 (9%), Positives = 26/110 (23%), Gaps = 6/110 (5%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILH----GNNLIGIIPKELGLLKRLKILDLGTNQL 130
+ + AP L L+ + + E R + +D Q
Sbjct: 289 GHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQY 348
Query: 131 TGPIPPEIG-NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ ++ + + + L ++ L+
Sbjct: 349 RT-VIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQI 397
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 14/107 (13%), Positives = 25/107 (23%), Gaps = 1/107 (0%)
Query: 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+ S L E +E+ +I + + L+ L
Sbjct: 315 HALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDE 374
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L Q+ G L L+ L R +
Sbjct: 375 QVSNGRRAHAELDGTLQQAVGQI-ELQHATEEQSPLQLLRAIVKRYE 420
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 7e-18
Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 16/180 (8%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++++G+ LK L LT L +L L N + + P L L +L L LG NQ++
Sbjct: 225 ELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI 280
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + LT L + L N L + + NL +L L L N + P S +
Sbjct: 281 SP--LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLT----K 332
Query: 194 IHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQNKDP 249
+ ++ + ++ L +L+ + +N P L + N
Sbjct: 333 LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPV 392
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-16
Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 31/173 (17%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ + + + L LT L L L+ N L I P + LK L L L N ++
Sbjct: 269 ELKLGANQISNI--SPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDI 324
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + +LT L ++ +N ++ + L NL ++ L N++
Sbjct: 325 SP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQIS-------------- 366
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+LT L +L+++ + + + + + N
Sbjct: 367 ---------DLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGA 410
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-16
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ + + + LG+LT L EL L+GN L I L L L LDL NQ++
Sbjct: 203 SLIATNNQISDI--TPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNL 258
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + LT L ++ L +N ++ + L L +L L L+ N+L+ P + N
Sbjct: 259 AP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISPISNLK----N 310
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
+ + N++ + L++L+ F N
Sbjct: 311 LTYLTLYFNNISDISPVSSLTKLQRLFFYNN 341
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 5e-15
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+IN S + L L LT L +++++ N + I P L L L L L NQ+T
Sbjct: 72 QINFSNNQLTDI--TPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI 127
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + NLT L ++ L SN ++ + L L SL++L N++ P + +
Sbjct: 128 DP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFG-NQVTDLKPLANLT----T 178
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + SS ++ L L+ L+ + N P L L +
Sbjct: 179 LERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTN 222
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 7e-14
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K + +++ L + L + I + L L ++ NQLT
Sbjct: 26 KMKTVLGKTNVTDT--VSQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT 81
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
P + NLT LV I + +N + L NL +L L L N++ P + +
Sbjct: 82 DITP--LKNLTKLVDILMNNNQIAD--ITPLANLTNLTGLTLFNNQITDIDPLKNLT--- 134
Query: 192 ANIHGMYASSANLTG---LCHLSQLKVADFSYN 221
N++ + SS ++ L L+ L+ F
Sbjct: 135 -NLNRLELSSNTISDISALSGLTSLQQLSFGNQ 166
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 4e-10
Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 15/142 (10%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
I + I L LG +T + +L + + G+
Sbjct: 6 ATITQDTPINQIFT--DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS- 60
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLK 214
+ L +L +++ N+L P + + + + ++ + L +L+ L
Sbjct: 61 -IDGVEYLNNLTQINFSNNQLTDITPLKNLT----KLVDILMNNNQIADITPLANLTNLT 115
Query: 215 VADFSYNFFVGSIPKCLEYLPS 236
N P L+ L +
Sbjct: 116 GLTLFNNQITDIDP--LKNLTN 135
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 12/110 (10%), Positives = 27/110 (24%), Gaps = 5/110 (4%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ + + L LT + +L L+ + + T L P
Sbjct: 357 WLSAGHNQISDL--TPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAP 414
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
I + + ++ N + + G V
Sbjct: 415 A--TISDGGSYTEPDITWNLPSY-TNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 3e-16
Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 20/182 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++S + L+ + LQ L L + I L L L L N +
Sbjct: 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS- 90
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ L+ L K+ L +G+L +L+EL++ N +Q +
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNLT 149
Query: 193 NIHGMYASSANLTGLC-----HLSQLKVA----DFSYNFFVGSIPKCLEYLPSTSFQGNC 243
N+ + SS + + L Q+ + D S N + ++ +F+
Sbjct: 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP--------MNFIQPGAFKEIR 201
Query: 244 LQ 245
L
Sbjct: 202 LH 203
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 2e-15
Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 6/159 (3%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L + L L N L + L++LDL ++ +L+ L + L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA----NIHGMYASSANL-T 205
N + L SL++L L + N+ S L
Sbjct: 85 GNPIQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+L+ L+ D S N L L L
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 1e-14
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
++ S+LK L L L + + L L++L + N
Sbjct: 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 459
Query: 133 PIPPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
P+I L L ++L L +L +L SL+ L++ N+L+
Sbjct: 460 NFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 2e-13
Identities = 32/163 (19%), Positives = 48/163 (29%), Gaps = 32/163 (19%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-- 138
S KG + T L+ L L N +I + L++L+ LD + L +
Sbjct: 360 SFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ-MSEFSVF 417
Query: 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198
+L L+ +++ L SLE L + N Q
Sbjct: 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI------------ 465
Query: 199 ASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L D S LE L T+F
Sbjct: 466 --------FTELRNLTFLDLSQCQ--------LEQLSPTAFNS 492
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 2e-12
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPI 134
+IS + + L+ L+ L + GN+ + L+ L LDL QL +
Sbjct: 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-L 485
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
P +L+ L +N+ SN L +P L SL+++ L N
Sbjct: 486 SPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 9e-09
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 74 KINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG 132
+ ++G+S + P+ L L L L L + P L L++L++ +NQL
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508
Query: 133 PIPPEI-GNLTGLVKINLQSN 152
+P I LT L KI L +N
Sbjct: 509 -VPDGIFDRLTSLQKIWLHTN 528
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 20/200 (10%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILH---GNNLIGIIPKELGLLKRLKILDLGTNQL 130
+++S + ++ +L +L + L L N + I RL L L N
Sbjct: 153 HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFD 212
Query: 131 TGPIPPE-IGNLTGLVKINLQ------SNGLTGRLPAELGNLISLEELHLDRNRLQG--- 180
+ + I L GL L L + L L +L L
Sbjct: 213 SLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLD 272
Query: 181 ---AVPAGSNSGYTANIHGMYASS-ANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + + ++ + + + L++ + + F K L+ L
Sbjct: 273 DIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL-- 330
Query: 237 TSFQGNCLQNKDPKQRATTL 256
+F N N + +L
Sbjct: 331 -TFTSNKGGNAFSEVDLPSL 349
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-05
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
LT + L + + + L++++ Q L L ++ S
Sbjct: 281 LTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT------LKLKSLKRLTFTS 334
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLT----G 206
N +E+ +L SLE L L RN L + S+ G T ++ + S +
Sbjct: 335 NKGGN-AFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTT-SLKYLDLSFNGVITMSSN 391
Query: 207 LCHLSQLKVADFSYN 221
L QL+ DF ++
Sbjct: 392 FLGLEQLEHLDFQHS 406
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 9e-16
Identities = 36/175 (20%), Positives = 54/175 (30%), Gaps = 44/175 (25%)
Query: 85 FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL--- 141
F+ P T+LQE + H +NL +P E +K ++ PP G
Sbjct: 2 FINPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREM 60
Query: 142 ----------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
++ L + GL+ LP + LE L N L +P
Sbjct: 61 AVSRLRDCLDRQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPE------- 108
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L L V + + +P LEYL N L+
Sbjct: 109 --------------LPQSLKSLLVDNNNLKAL-SDLPPLLEYL---GVSNNQLEK 145
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 1e-14
Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 46/192 (23%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP---------------P 136
L +L+ L+ N+L +P+ LK L + + L+ P P
Sbjct: 89 LPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLP 147
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAEL-------------------GNLISLEELHLDRNR 177
E+ N + L I++ +N L +LP NL L ++ D N
Sbjct: 148 ELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNS 206
Query: 178 LQGAVPAGSNSGYTANIHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSIPKCLEYL 234
L+ +P ++ + A + L L +L L N ++P L
Sbjct: 207 LK-KLPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLK-TLPDLPPSL 259
Query: 235 PSTSFQGNCLQN 246
+ + + N L +
Sbjct: 260 EALNVRDNYLTD 271
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 3e-13
Identities = 38/179 (21%), Positives = 64/179 (35%), Gaps = 34/179 (18%)
Query: 88 PELGLLTYLQELILHGNNL-------------------IGIIPKELGLLKRLKILDLGTN 128
PEL ++L+ + + N+L + +P EL L L + N
Sbjct: 147 PELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNN 205
Query: 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
L +P +L + +N L LP EL NL L ++ D N L+ +P
Sbjct: 206 SLKK-LPDLPLSLESI---VAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPDLP-- 256
Query: 189 GYTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
++ + LT L L D S N F + + L + N +++
Sbjct: 257 ---PSLEALNVRDNYLTDLPELPQSLTFLDVSENIF-SGLSELPPNLYYLNASSNEIRS 311
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L L L N + + L L+ L++ N+L +P L ++
Sbjct: 295 LPPNLYYLNASSNEIRSLC----DLPPSLEELNVSNNKLIE-LPALPPRLE---RLIASF 346
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L +P N L++LH++ N L+
Sbjct: 347 NHLA-EVPELPQN---LKQLHVEYNPLR 370
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 5e-10
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 25/105 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L L+EL + N LI +P RL+ L N L +P NL L +++
Sbjct: 314 DLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHLAE-VPELPQNLKQL---HVE 365
Query: 151 SNGLTGRLPAELGNLI----------------SLEELHLDRNRLQ 179
N L P ++ +L++LH++ N L+
Sbjct: 366 YNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR 409
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 21/103 (20%)
Query: 92 LLTYLQELILHGNNLIGIIPKELG----------------LLKRLKILDLGTNQLTGPIP 135
L L++L + N L P L + LK L + TN L P
Sbjct: 355 LPQNLKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE-FP 412
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
++ L + S + LE+ + +
Sbjct: 413 DIPESVEDL---RMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 5e-15
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 33/169 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++I + + E L + + + + + L +++++L+L Q+ I
Sbjct: 26 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 84
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ K+ + N + LP N+ L L L+RN L ++P G
Sbjct: 85 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGI------ 136
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +L S N LE + +FQ
Sbjct: 137 --------------FHNTPKLTTLSMSNNN--------LERIEDDTFQA 163
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 2e-14
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L E+ L N L I+ ++RL+ L + N+L + + L +
Sbjct: 242 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 300
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+L N L + LE L+LD N + + ++
Sbjct: 301 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT 340
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 4e-13
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 8/152 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ S+++ A L ++ L L+ + I ++ L +G N +
Sbjct: 49 IVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY- 107
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+PP + N+ L + L+ N L+ LP + N L L + N L+ + + T
Sbjct: 108 LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQA-T 164
Query: 192 ANIHGMYASSANLTGL--CHLSQLKVADFSYN 221
++ + SS LT + + L A+ SYN
Sbjct: 165 TSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 5e-13
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L+ L + N + + + LK+LDL N L + L + L N
Sbjct: 271 MQRLERLYISNNR-LVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHN 328
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L L +L+ L L N
Sbjct: 329 SIV-TLK--LSTHHTLKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 4e-11
Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 37/159 (23%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
L + ++EL N+ I ++ + L IL L N LT + N GLV+++
Sbjct: 200 TLAIPIAVEELDASHNS-INVVRG--PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVD 254
Query: 149 LQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
L N L ++ + LE L++ NRL ++
Sbjct: 255 LSYNELE-KIMYHPFVKMQRLERLYISNNRLV-------------ALNLY---------G 291
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ LKV D S+N L ++ Q + L+N
Sbjct: 292 QPIPTLKVLDLSHNH--------LLHVERNQPQFDRLEN 322
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 17/139 (12%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISL 168
I L + + E L + +++ + +LPA L + +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223
E L+L+ +++ + + + I +Y + L ++ L V N
Sbjct: 72 ELLNLNDLQIE-EIDTYAFAYAH-TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND- 128
Query: 224 VGSIPKCLEYLPSTSFQGN 242
L LP F
Sbjct: 129 -------LSSLPRGIFHNT 140
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 77.3 bits (190), Expect = 6e-15
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 33/169 (19%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
++I + + E L + + + + + L +++++L+L Q+ I
Sbjct: 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-I 90
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ K+ + N + LP N+ L L L+RN L ++P G
Sbjct: 91 DTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGI------ 142
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +L S N LE + +FQ
Sbjct: 143 --------------FHNTPKLTTLSMSNNN--------LERIEDDTFQA 169
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 75.0 bits (184), Expect = 3e-14
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L E+ L N L I+ ++RL+ L + N+L + + L +
Sbjct: 248 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 306
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG 189
+L N L + LE L+LD N + + ++
Sbjct: 307 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHT 346
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 74.2 bits (182), Expect = 5e-14
Identities = 36/152 (23%), Positives = 51/152 (33%), Gaps = 24/152 (15%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + NNL I L+ L L +N+LT + + L N+ N
Sbjct: 146 TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDL--SLIPSLFHANVSYN 202
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT---GLCH 209
L+ L I++EEL N + V N + + NLT L +
Sbjct: 203 LLS-----TLAIPIAVEELDASHNSIN-VVRGPVNV----ELTILKLQHNNLTDTAWLLN 252
Query: 210 LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L D SYN LE + F
Sbjct: 253 YPGLVEVDLSYNE--------LEKIMYHPFVK 276
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 7e-13
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L+ L + N + + + LK+LDL N L + L + L N
Sbjct: 277 MQRLERLYISNNR-LVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHN 334
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+ L L +L+ L L N
Sbjct: 335 SIV-TLK--LSTHHTLKNLTLSHNDWD 358
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 4e-11
Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 17/152 (11%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
+L L+ L + N L L + ++ LD N + + + L +
Sbjct: 187 DLSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSINV-VRGPV--NVELTILK 238
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
LQ N LT L N L E+ L N L+ + + +Y S+ L L
Sbjct: 239 LQHNNLT-DTAW-LLNYPGLVEVDLSYNELE-KIMYHPFVK-MQRLERLYISNNRLVALN 294
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ LKV D S+N + + +
Sbjct: 295 LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 325
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L + L+ L L N+L+ + + RL+ L L N + + L
Sbjct: 293 LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKL--STHHTLK 348
Query: 146 KINLQSNGLTG-RLPAELGNLISLEELHLDRN 176
+ L N L A N+ D++
Sbjct: 349 NLTLSHNDWDCNSLRALFRNVARPAVDDADQH 380
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 9e-15
Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 13/171 (7%)
Query: 76 NISGSSLKGFLAPELGLL-TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
N+S ++ +LA L L+ L + + + +++ + L LDL N G
Sbjct: 130 NVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189
Query: 135 PPEI----GNLTGLVKINLQSNGLT---GRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
L + L++ G+ G A + L+ L L N L+ +
Sbjct: 190 GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD-AAGAPS 248
Query: 188 SGYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ + ++ + S L + ++L V D SYN P E LP
Sbjct: 249 CDWPSQLNSLNLSFTGLKQVPKGLPAKLSVLDLSYNRL-DRNPSPDE-LPQ 297
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 9e-11
Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 16/164 (9%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIG-------IIPKELGLLKRLKILDLG 126
++I+ + F ++ + L L L N +G + P + L+ L + + G
Sbjct: 153 VLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+G L ++L N L A L L+L L+ VP G
Sbjct: 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271
Query: 186 SNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226
+ + + S L L Q+ N F+ S
Sbjct: 272 LPA----KLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 6e-08
Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 18/179 (10%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL--KRLKILDLGTNQLTG 132
I L G L + ++ LQEL L + G P L L IL+L
Sbjct: 78 ARIPSRILFGAL--RVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT 135
Query: 133 --PIPPEIGNL--TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGS 186
E+ GL +++ ++ +L L L N G + +
Sbjct: 136 RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195
Query: 187 NSGYTANIHGMYASSANLTGL--------CHLSQLKVADFSYNFFVGSIPKCLEYLPST 237
+ + +A + QL+ D S+N + PS
Sbjct: 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 18/157 (11%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKI--LDLGTNQLTGPIPP---EIGNLTGLVKINLQSN 152
E +L + + + ++K L + L + ++ I + ++GL ++ L++
Sbjct: 46 EYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENL 105
Query: 153 GLTGRLPAELGNLI--SLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGL- 207
+TG P L L L+L A A + + + A+
Sbjct: 106 EVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFS 165
Query: 208 ----CHLSQLKVADFSYNFFVGSIP----KCLEYLPS 236
L D S N +G C P+
Sbjct: 166 CEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPT 202
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 1e-14
Identities = 19/142 (13%), Positives = 47/142 (33%), Gaps = 29/142 (20%)
Query: 80 SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG 139
+ L G + +++L ++ + P + L L+ L + +T P +
Sbjct: 57 TDLTG-----IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLS 109
Query: 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199
LT L +++ + + ++ L + + L N
Sbjct: 110 GLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA--------------------- 148
Query: 200 SSANLTGLCHLSQLKVADFSYN 221
++ L L +LK + ++
Sbjct: 149 -ITDIMPLKTLPELKSLNIQFD 169
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-13
Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 26/144 (18%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L + L N+ + + +K L + T P I L+ L ++ +
Sbjct: 43 MNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGK 98
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
+T L L SL L + + + LT + L +
Sbjct: 99 DVTSDKIPNLSGLTSLTLLDISHSAH---------------------DDSILTKINTLPK 137
Query: 213 LKVADFSYNFFVGSIPKCLEYLPS 236
+ D SYN + I L+ LP
Sbjct: 138 VNSIDLSYNGAITDI-MPLKTLPE 160
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-12
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ I G + P L LT L L + + I ++ L ++ +DL N
Sbjct: 92 RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD 151
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
I P + L L +N+Q +G+ + + L +L+ + G
Sbjct: 152 IMP-LKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGG 195
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 2e-14
Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L + L+L N + + L++L++L+LG+ I E NL L ++L S
Sbjct: 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207
+ + L + L L EL L L AV + + S + L
Sbjct: 83 SKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH 141
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQ 240
L+ LK DFS N LE L +
Sbjct: 142 PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 5e-13
Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 5/165 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
+ ++ L L + + + LK LK+L+L N++ I E L L +NL
Sbjct: 265 RSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK-IADEAFYGLDNLQVLNLSY 323
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS 211
N L + L + + L +N + + + + + LT + +
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNHIA-IIQDQTFKFLE-KLQTLDLRDNALTTIHFIP 381
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTL 256
+ S N V ++PK N L+N D +
Sbjct: 382 SIPDIFLSGNKLV-TLPKINLTANLIHLSENRLENLDILYFLLRV 425
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 8e-11
Identities = 34/159 (21%), Positives = 50/159 (31%), Gaps = 29/159 (18%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-----GNLTGLVK 146
+ +LQ LIL+ N + L+ L LG N L E+ L+ L
Sbjct: 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQV 484
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L N L P +L +L L L+ NRL L+
Sbjct: 485 LYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-----------------------VLSH 521
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
+ L++ D S N + P L N
Sbjct: 522 NDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFI 560
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 2e-10
Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 14/181 (7%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
V +++S + + L L+ L L N + I + L L++L+L N L
Sbjct: 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLG 327
Query: 132 GPIPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGY 190
+ L + I+LQ N + L L+ L L N L + +
Sbjct: 328 E-LYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-------TTIHF 379
Query: 191 TANIHGMYASSANLTGLCHLS-QLKVADFSYNFF----VGSIPKCLEYLPSTSFQGNCLQ 245
+I ++ S L L ++ + S N + + +L N
Sbjct: 380 IPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439
Query: 246 N 246
+
Sbjct: 440 S 440
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 4e-07
Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 32/156 (20%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147
+ + + ++ L GN L+ + L ++ L N+L I + + L +
Sbjct: 376 TIHFIPSIPDIFLSGNKLVTLPKINL----TANLIHLSENRLENLDILYFLLRVPHLQIL 431
Query: 148 NLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
L N + + SLE+L L N + + +
Sbjct: 432 ILNQNRFS-SCSGDQTPSENPSLEQLFLGEN----------------MLQLAWETELCWD 474
Query: 206 GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
LS L+V ++N+ L LP F
Sbjct: 475 VFEGLSHLQVLYLNHNY--------LNSLPPGVFSH 502
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 3e-06
Identities = 37/187 (19%), Positives = 64/187 (34%), Gaps = 23/187 (12%)
Query: 74 KINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLL--KRLKILDLGTNQL 130
++++S + ++ L P G L L+ + N + + EL L K L L N L
Sbjct: 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186
Query: 131 TGPIPPEIGNLTG------LVKINLQSNGLTGRLPAELGNLIS-LEELHLDRNRLQGAVP 183
+ + G L +++ NG T + N IS + L
Sbjct: 187 YSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246
Query: 184 AGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP----KCLEYLPSTSF 239
G + NI GL S ++ D S+ F S+ + L+ L +
Sbjct: 247 FGFH-----NIKDP--DQNTFAGLARSS-VRHLDLSHGFVF-SLNSRVFETLKDLKVLNL 297
Query: 240 QGNCLQN 246
N +
Sbjct: 298 AYNKINK 304
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 44 HLVLSNWNALDADPCHWTGIACSD-ARDRVLKI---NISGSSLKGFLAPELGLLTYLQEL 99
L+L+ N + T S+ L + + + L++LQ L
Sbjct: 430 ILILNQ-NRFSSCSGDQT---PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVL 485
Query: 100 ILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP 159
L+ N L + P L L+ L L +N+LT + L +++ N L P
Sbjct: 486 YLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-LSHND-LPANLEILDISRNQLLAPNP 543
Query: 160 AELGNLISLEELHLDRNRLQ 179
+SL L + N+
Sbjct: 544 ---DVFVSLSVLDITHNKFI 560
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-14
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 13/153 (8%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEI-GNLTGLVKIN 148
+ LQEL +H N + + L ++ +++LGTN L I + L I
Sbjct: 118 KMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
+ +T +P L SL ELHLD N++ V A S G N+ + S +++ +
Sbjct: 178 IADTNIT-TIPQGL--PPSLTELHLDGNKIT-KVDAASLKGLN-NLAKLGLSFNSISAVD 232
Query: 209 -----HLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L+ + N V +P L
Sbjct: 233 NGSLANTPHLRELHLNNNKLV-KVPGGLADHKY 264
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL L EL L GN + + L L L L L N ++ + N L +++L
Sbjct: 189 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHL 247
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+N L ++P L + ++ ++L N + A+ +
Sbjct: 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSND 282
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L LIL N + I P L +L+ L L NQL +P ++ L ++ + N
Sbjct: 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKM--PKTLQELRVHEN 131
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQ 179
+T + L + + L N L+
Sbjct: 132 EITKVRKSVFNGLNQMIVVELGTNPLK 158
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 6e-11
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L +L L N++ + L L+ L L N+L +P + + + + L +N
Sbjct: 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNN 273
Query: 153 GLTG------RLPAELGNLISLEELHLDRNRLQ 179
++ P S + L N +Q
Sbjct: 274 NISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 6e-11
Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 22/147 (14%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L L L N + I + LK L L L N+++ I P L L ++ L
Sbjct: 49 DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK-ISPGAFAPLVKLERLYL 107
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
N L LP ++ +L+EL + N + V +G + +
Sbjct: 108 SKNQLK-ELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLN-----------QMIVV-E 151
Query: 210 LS--QLKVADFSYNFFVGSIPKCLEYL 234
L LK + F G K L Y+
Sbjct: 152 LGTNPLKSSGIENGAFQGM--KKLSYI 176
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 6e-10
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG------PIPPEIGNLTGLVK 146
+L+EL L+ N L+ +P L K ++++ L N ++ P
Sbjct: 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSG 297
Query: 147 INLQSNGLT-GRLPAEL-GNLISLEELHLDRNR 177
++L SN + + + + L +
Sbjct: 298 VSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 73.5 bits (180), Expect = 9e-14
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL----VKI 147
L T L+ L + N L +P+ L + L+ LD+ TN L +P +
Sbjct: 158 LPTSLEVLSVRNNQL-TFLPE---LPESLEALDVSTNLLES-LPAVPVRNHHSEETEIFF 212
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ N +T +P + +L + L+ N L
Sbjct: 213 RCRENRIT-HIPENILSLDPTCTIILEDNPLS 243
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 5e-11
Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 17/161 (10%)
Query: 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
+ N + ++ + L+ + L L L+ +P + +
Sbjct: 29 YFSAWDKWEKQALPGENRNEAVSLLKE--CLINQFSELQLNRLNLSS-LPDNLP--PQIT 83
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT 205
+ + N L LP + LE L NRL +P A++ + + LT
Sbjct: 84 VLEITQNALI-SLPELPAS---LEYLDACDNRLS-TLPELP-----ASLKHLDVDNNQLT 133
Query: 206 GLCHL-SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
L L + L+ + N +P+ L S + N L
Sbjct: 134 MLPELPALLEYINADNNQLT-MLPELPTSLEVLSVRNNQLT 173
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 7e-11
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLK----ILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L+ L + N L + P + N++T IP I +L I
Sbjct: 178 LPESLEALDVSTNLLESL-PAVPVRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTI 235
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
L+ N L+ R+ L + + H R
Sbjct: 236 ILEDNPLSSRIRESLSQQTAQPDYHGPRIYF 266
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 86 LAPELGLLTYLQELILH---GNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT 142
L + +E + N I IP+ + L + L N L+ I + T
Sbjct: 195 LPAVPVRNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254
Query: 143 GLVKINLQSNGLT 155
+ +
Sbjct: 255 AQPDYHGPRIYFS 267
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 27/153 (17%), Positives = 43/153 (28%), Gaps = 31/153 (20%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEI-GNLTGLVKIN 148
G+ + L L N L + L +L L L +N L+ + T L ++
Sbjct: 25 GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
L NG+ + + L LE L + L+
Sbjct: 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSV--------------------FL 123
Query: 209 HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L D S+ + F G
Sbjct: 124 SLRNLIYLDISHTH--------TRVAFNGIFNG 148
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 32/151 (21%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L + + L L++L + N P+I L L ++L
Sbjct: 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
L +L +L SL+ L++ N ++ L
Sbjct: 185 CQLE-QLSPTAFNSLSSLQVLNMSHNNFF-SLDTFP--------------------YKCL 222
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ L+V D+S N + Q
Sbjct: 223 NSLQVLDYSLNH--------IMTSKKQELQH 245
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 75 INISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+ ++G+S + P+ L L L L L + P L L++L++ N
Sbjct: 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS- 213
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLI-SLEELHLDRNRLQ 179
+ L L ++ N + EL + SL L+L +N
Sbjct: 214 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 37/158 (23%), Positives = 54/158 (34%), Gaps = 18/158 (11%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ Q + LHGN + + + L IL L +N L I L L +++L
Sbjct: 29 GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAAAFTGLALLEQLDL 87
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
N + L L LHLDR LQ + G G + +Y L L
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLA-ALQYLYLQDNALQALP 145
Query: 208 ----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L N + +P +F+G
Sbjct: 146 DDTFRDLGNLTHLFLHGNR--------ISSVPERAFRG 175
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L L L + P L L+ L L N L +P + +L L + L
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHG 162
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAG 185
N ++ +P L SL+ L L +NR+ V
Sbjct: 163 NRIS-SVPERAFRGLHSLDRLLLHQNRVA-HVHPH 195
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 7e-10
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L LHGN + + + L L L L N++ + P +L L+ + L +
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRDLGRLMTLYLFA 210
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRN 176
N L+ LP E L L +L+ L L+ N
Sbjct: 211 NNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 4e-13
Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 17/158 (10%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL ++ L L N + I +L L+ L L +N + I + +L L ++L
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDSFSSLGSLEHLDL 107
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
N L+ L + L SL L+L N + S T + T +
Sbjct: 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166
Query: 209 -----HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L+ + + L+ S +
Sbjct: 167 RKDFAGLTFLEELEIDAS--------DLQSYEPKSLKS 196
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 18/159 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L+ L L L GN + L L +L+IL +G I + LT L ++ +
Sbjct: 123 LSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182
Query: 151 SNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTA----NIHGMYASSANLT 205
++ L + L ++ ++ L L + + ++ + + + +
Sbjct: 183 ASDLQ-SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFS 240
Query: 206 --------GLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L + + + K L +
Sbjct: 241 ELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISG 278
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI--------GNLTGL 144
+ + LILH I ++ + + ++ L+L L E+
Sbjct: 197 IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTF 256
Query: 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+ + L ++ L + L EL RN+L+ VP G
Sbjct: 257 RNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDG 295
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 11/96 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKEL--------GLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144
+ ++ L L +L EL + + + L + + ++GL
Sbjct: 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGL 279
Query: 145 VKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
+++ N L +P L SL+++ L N
Sbjct: 280 LELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
L + + + +L + K L + L L+ NQL +P I LT L KI
Sbjct: 250 LIKKFTFRNVKITDESLFQV-MKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIW 307
Query: 149 LQSN 152
L +N
Sbjct: 308 LHTN 311
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 4e-13
Identities = 33/155 (21%), Positives = 48/155 (30%), Gaps = 19/155 (12%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L L + + L +P L + L + N LT +P L L +
Sbjct: 38 LNNGNAVLNVGESGL-TTLPDCLP--AHITTLVIPDNNLTS-LPALPPELRTL---EVSG 90
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-CHL 210
N LT LP L+ L L A+P + + ++ LT L
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLP-ALP--------SGLCKLWIFGNQLTSLPVLP 140
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
L+ S N S+P L N L
Sbjct: 141 PGLQELSVSDNQL-ASLPALPSELCKLWAYNNQLT 174
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 1e-12
Identities = 38/162 (23%), Positives = 57/162 (35%), Gaps = 22/162 (13%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L + LQEL + N L +P L +L + N+LT +P L L +
Sbjct: 179 LPSGLQELSVSDNQLA-SLPTLPSELYKLWAYN---NRLT-SLPALPSGLKEL---IVSG 230
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT----GL 207
N LT LP L+EL + NRL ++P + + + LT L
Sbjct: 231 NRLT-SLPVLPSE---LKELMVSGNRLT-SLPMLPS-----GLLSLSVYRNQLTRLPESL 280
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDP 249
HLS + N + L + S + D
Sbjct: 281 IHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDM 322
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 2e-11
Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 37/198 (18%)
Query: 64 ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123
AC + + VL N+ S L P+ L ++ L++ NNL +P L+ L
Sbjct: 36 ACLNNGNAVL--NVGESGLTTL--PD-CLPAHITTLVIPDNNLT-SLPALPP---ELRTL 86
Query: 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTG----------------RLPAELGNLIS 167
++ NQLT +P L L + L LP
Sbjct: 87 EVSGNQLTS-LPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPG--- 142
Query: 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGS 226
L+EL + N+L ++PA + + ++A + LT L S L+ S N S
Sbjct: 143 LQELSVSDNQLA-SLPALP-----SELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA-S 195
Query: 227 IPKCLEYLPSTSFQGNCL 244
+P L N L
Sbjct: 196 LPTLPSELYKLWAYNNRL 213
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 2e-11
Identities = 41/188 (21%), Positives = 59/188 (31%), Gaps = 46/188 (24%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG----------------PIP 135
L L+ L + GN L +P L L I L +P
Sbjct: 79 LPPELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLP 137
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLI-----------------SLEELHLDRNRL 178
L L ++ N L LPA L L+EL + N+L
Sbjct: 138 VLPPGLQEL---SVSDNQLA-SLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQL 193
Query: 179 QGAVPAGSNSGYTANIHGMYASSANLTGL-CHLSQLKVADFSYNFFVGSIPKCLEYLPST 237
++P + ++ ++A + LT L S LK S N S+P L
Sbjct: 194 A-SLPTLP-----SELYKLWAYNNRLTSLPALPSGLKELIVSGNRL-TSLPVLPSELKEL 246
Query: 238 SFQGNCLQ 245
GN L
Sbjct: 247 MVSGNRLT 254
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 7e-06
Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 10/101 (9%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
L + L L ++ N L + P+ L L ++L N L+ + +T S
Sbjct: 259 LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPLSERTLQALREITSA---PGYS 314
Query: 152 NGLT------GRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+ P E L L R PA
Sbjct: 315 GPIIRFDMAGASAPRETRALHLAAADWLVPAREGEPAPADR 355
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 6e-13
Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 19/159 (11%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL ++ L L N + I +L L++L L ++++ I + +L L ++L
Sbjct: 23 GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEGDAFYSLGSLEHLDL 81
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-- 206
N L+ L + G L SL+ L+L N Q + S N+ + +
Sbjct: 82 SDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQ-TLGVTSLFPNLTNLQTLRIGNVETFSEI 139
Query: 207 ----LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L+ L + L S S +
Sbjct: 140 RRIDFAGLTSLNELEIKALS--------LRNYQSQSLKS 170
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 7e-13
Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 11/179 (6%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+++I L L+ LL ++ + + + + + LK L+ LDL N +
Sbjct: 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEE 349
Query: 134 IPPE---IGNLTGLVKINLQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNS 188
G L + L N L + L L +L L + RN +P
Sbjct: 350 YLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408
Query: 189 GYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245
+ + SS + + C L+V D S N S L L N L+
Sbjct: 409 --PEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNL-DSFSLFLPRLQELYISRNKLK 464
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 7e-11
Identities = 25/174 (14%), Positives = 48/174 (27%), Gaps = 13/174 (7%)
Query: 75 INISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTG 132
+N+ G+ + LT LQ L + I + L L L++ L
Sbjct: 103 LNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
+ ++ + + L + L L S+ L L L
Sbjct: 163 YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR-FQFSPLPVDEV 221
Query: 193 NIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+ + + D S+N + + + + L F L
Sbjct: 222 S---------SPMKKLAFRGSVLTDESFNELL-KLLRYILELSEVEFDDCTLNG 265
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 8e-11
Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 23/147 (15%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
++ L + L + LL+++K + + +++ +L L ++L N
Sbjct: 285 TVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSEN 344
Query: 153 GLT---GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
+ + A G SL+ L L +N L+ ++ L
Sbjct: 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEI------------------LLT 385
Query: 210 LSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L D S N F +P ++
Sbjct: 386 LKNLTSLDISRNTF-HPMPDSCQWPEK 411
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
N+S + ++ + + L+ L + NNL L RL+ L + N+L
Sbjct: 416 NLSSTGIRVV---KTCIPQTLEVLDVSNNNLDSFSLF----LPRLQELYISRNKLK--TL 466
Query: 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
P+ L+ + + N L L SL+++ L N
Sbjct: 467 PDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 5/154 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
LT L EL + +L + L ++ + L L ++ + L+ + + L+
Sbjct: 147 LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
L + L + R + S + + + S C L+
Sbjct: 207 NLARFQFSPLPVDEVSSPMKKLAFRGSV-LTDESFNELLKLLRYILELSEVEFDDCTLNG 265
Query: 213 LKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
L + S + + L + + + + +
Sbjct: 266 LGDFNPSES----DVVSELGKVETVTIRRLHIPQ 295
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 3/163 (1%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ I SL+ + + L + + L LH + ++ +L ++ L+L L
Sbjct: 152 ELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARF 211
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ + + + L+ L L+ + ++ + +G
Sbjct: 212 QFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE--FDDCTLNGLGDF 269
Query: 194 IHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
+ L + ++ + + L
Sbjct: 270 NPSESDVVSELGKV-ETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 7e-13
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+++ + +K E +L+EL L+ N + + P L L+ L L +N+L I
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-I 95
Query: 135 PPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
P + L+ L K+++ N + L +L +L+ L + N L + + SG +
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLN-S 153
Query: 194 IHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + NLT + HL L V + + + SF+
Sbjct: 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN--------INAIRDYSFKR 198
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 8e-13
Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 17/156 (10%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L L L N+ I L RLK+L++ + P L +++
Sbjct: 175 LHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
LT +P + +L+ L L+L N + + + + L +
Sbjct: 235 NLT-AVPYLAVRHLVYLRFLNLSYNPIS-TIEGSMLHELL-RLQEIQLVGGQLAVVEPYA 291
Query: 208 -CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGN 242
L+ L+V + S N L L + F
Sbjct: 292 FRGLNYLRVLNVSGN--------QLTTLEESVFHSV 319
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 7e-12
Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 33/153 (21%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ T + L L N + + E L+ L+L N ++ + P NL L + L
Sbjct: 29 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA-VEPGAFNNLFNLRTLGL 87
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208
+SN L +P L +L +L + N++ +
Sbjct: 88 RSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYM--------------------FQ 125
Query: 209 HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L LK + N L Y+ +F G
Sbjct: 126 DLYNLKSLEVGDND--------LVYISHRAFSG 150
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 1e-11
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 17/155 (10%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+ L + N+L+ I + L L+ L L LT IP E +L GL+ + L+
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRH 185
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
+ L L+ L + + G N+ + + NLT +
Sbjct: 186 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG--LNLTSLSITHCNLTAVPYLA 243
Query: 208 -CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
HL L+ + SYN + + +
Sbjct: 244 VRHLVYLRFLNLSYN--------PISTIEGSMLHE 270
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 5/113 (4%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
IS + P L L + NL + + L L+ L+L N ++ I
Sbjct: 206 EISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIST-IE 264
Query: 136 PEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
+ L L +I L L + L L L++ N+L +
Sbjct: 265 GSMLHELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLT-TLEESV 315
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 44 HLVLSNWNALDA-DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH 102
L +S+W LD P G+ + ++I+ +L + L YL+ L L
Sbjct: 204 VLEISHWPYLDTMTPNCLYGL-------NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLS 256
Query: 103 GNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAE 161
N + I L L RL+ + L QL + P L L +N+ N LT L
Sbjct: 257 YNPISTIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFRGLNYLRVLNVSGNQLT-TLEES 314
Query: 162 L-GNLISLEELHLDRNRLQ 179
+ ++ +LE L LD N L
Sbjct: 315 VFHSVGNLETLILDSNPLA 333
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 13/137 (9%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L LT + EL L GN L + + L+ +K LDL + Q+T P + L+ L +
Sbjct: 79 APLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVL 134
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-- 205
L N +T + L L +L+ L + ++ P + S + + A ++
Sbjct: 135 YLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTPLANLS----KLTTLKADDNKISDI 188
Query: 206 -GLCHLSQLKVADFSYN 221
L L L N
Sbjct: 189 SPLASLPNLIEVHLKNN 205
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-11
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+KI S++ L + L G + I + + L L L+L NQ+T
Sbjct: 21 AIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQIT 76
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ P + NLT + ++ L N L + + L S++ L L ++ P S
Sbjct: 77 D-LAP-LKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQITDVTPLAGLS--- 129
Query: 192 ANIHGMYASS---ANLTGLCHLSQLKVADFSYN 221
N+ +Y N++ L L+ L+
Sbjct: 130 -NLQVLYLDLNQITNISPLAGLTNLQYLSIGNA 161
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 5e-10
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 29/129 (22%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L ++ +N+ + L + L +T I + L L+ + L+ N
Sbjct: 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELKDN 73
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
+T L L NL + EL L N L+ N++ + L
Sbjct: 74 QIT-DLA-PLKNLTKITELELSGNPLK-----------------------NVSAIAGLQS 108
Query: 213 LKVADFSYN 221
+K D +
Sbjct: 109 IKTLDLTST 117
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L L E+ L N + + P L L I+ L +T NL +
Sbjct: 189 SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVV 246
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRN 176
S PA + + + +L N
Sbjct: 247 KGPSGAPI--APATISDNGTYASPNLTWN 273
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 1e-12
Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 15/170 (8%)
Query: 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135
N + S + ++ L N L + + G L L+ L L NQL +
Sbjct: 306 NFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKE-LS 364
Query: 136 PEIG---NLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYT 191
+ L ++++ N ++ SL L++ N L +
Sbjct: 365 KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF----RCLP 420
Query: 192 ANIHGMYASSANLT----GLCHLSQLKVADFSYNFFVGSIPKC-LEYLPS 236
I + S + + L L+ + + N S+P + L S
Sbjct: 421 PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTS 469
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 9e-11
Identities = 33/161 (20%), Positives = 56/161 (34%), Gaps = 28/161 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L+ L+ LI+ N + + + L+ LDL N+L I L ++L N
Sbjct: 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-IS--CHPTVNLKHLDLSFN 100
Query: 153 GLTGRLP--AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
LP E GN+ L+ L L L+ +++ + HL
Sbjct: 101 AFD-ALPICKEFGNMSQLKFLGLSTTHLE---------------------KSSVLPIAHL 138
Query: 211 SQLKVADFSYNFFVGSI-PKCLEYLPSTSFQGNCLQNKDPK 250
+ KV + P+ L+ + S NK+
Sbjct: 139 NISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFH 179
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + N L I + L R+K+LDL +N++ IP ++ L L ++N+ SN
Sbjct: 398 TKSLLSLNMSSNILTDTIFR--CLPPRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASN 454
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQ 179
L +P L SL+++ L N
Sbjct: 455 QLK-SVPDGIFDRLTSLQKIWLHTNPWD 481
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 12/148 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L + + + + I + + ++ + ++ +N
Sbjct: 275 LKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM---YASSANLT---- 205
LT + G+L LE L L N+L+ + + T + + S +++
Sbjct: 335 LLTDTVFENCGHLTELETLILQMNQLK-ELS--KIAEMTTQMKSLQQLDISQNSVSYDEK 391
Query: 206 -GLC-HLSQLKVADFSYNFFVGSIPKCL 231
G C L + S N +I +CL
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCL 419
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 8e-07
Identities = 31/158 (19%), Positives = 52/158 (32%), Gaps = 41/158 (25%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
N LI + PK L ++ IL++ N ++ +I +L+ L + + N + L
Sbjct: 7 RSKNGLIHV-PK--DLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDI 62
Query: 161 E-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFS 219
LE L L N+L + LK D S
Sbjct: 63 SVFKFNQELEYLDLSHNKLV-KISCH-----------------------PTVNLKHLDLS 98
Query: 220 YNFFVGSIPKC--------LEYLPSTSFQGNCLQNKDP 249
+N F ++P C L++L L+
Sbjct: 99 FNAF-DALPICKEFGNMSQLKFL---GLSTTHLEKSSV 132
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 9/134 (6%)
Query: 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGL 154
+ + L G LK L I + ++ P + + N +G
Sbjct: 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL------- 207
+ L N L + T + + L L
Sbjct: 313 RMVHMLCPSKISPFLHLDFSNNLLT-DTVFENCGHLT-ELETLILQMNQLKELSKIAEMT 370
Query: 208 CHLSQLKVADFSYN 221
+ L+ D S N
Sbjct: 371 TQMKSLQQLDISQN 384
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L L EL L N + I ++L +L L LG NQ+ I L L +++L
Sbjct: 190 DLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM-IENGSLSFLPTLRELHL 248
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+N L+ R+PA L +L L+ ++L N + V
Sbjct: 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVND 283
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 3e-12
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT-GPIPPEIGNLTGLVKINL 149
L + L EL +H N + + L+ + +++G N L P + L + +
Sbjct: 120 NLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRI 179
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-- 207
LT +P +L +L ELHLD N++Q A+ Y+ ++ + + +
Sbjct: 180 SEAKLT-GIPKDL--PETLNELHLDHNKIQ-AIELEDLLRYS-KLYRLGLGHNQIRMIEN 234
Query: 208 ---CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L L+ N +P L L
Sbjct: 235 GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKL 265
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 6e-12
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L +L L+L N + I K L++L+ L + N L IPP + + LV++ + N
Sbjct: 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNL--PSSLVELRIHDN 133
Query: 153 GLTGRLPAE-LGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTGLCH- 209
+ ++P L ++ + + N L+ G+ G ++ + S A LTG+
Sbjct: 134 RIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG--LKLNYLRISEAKLTGIPKD 190
Query: 210 -LSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L +N ++ +
Sbjct: 191 LPETLNELHLDHN--------KIQAIELEDLLR 215
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 5e-11
Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 20/138 (14%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
+ L L N++ + + L+ L L L N+++ I + L L K+ +
Sbjct: 51 EISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK-IHEKAFSPLRKLQKLYI 109
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
N L +P L SL EL + NR++ VP G SG N+ +
Sbjct: 110 SKNHLV-EIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLR-----------NMNCI-E 153
Query: 210 LS--QLKVADFSYNFFVG 225
+ L+ + F F G
Sbjct: 154 MGGNPLENSGFEPGAFDG 171
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 9/94 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L L L N + I L L L+ L L N+L+ +P + +L L + L +N
Sbjct: 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYLHTN 274
Query: 153 GLTGRLPAE-------LGNLISLEELHLDRNRLQ 179
+T ++ + L N +
Sbjct: 275 NIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 11/94 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-------GNLTGLV 145
L L+EL L N L +P L LK L+++ L TN +T +
Sbjct: 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK-VGVNDFCPVGFGVKRAYYN 297
Query: 146 KINLQSNGLTGRL--PAELGNLISLEELHLDRNR 177
I+L +N + PA + + +
Sbjct: 298 GISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
L L L N L L RL L+L +LT G L L ++L
Sbjct: 28 DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT--KLQVDGTLPVLGTLDLS 85
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
N L LP L +L L + NRL ++P G
Sbjct: 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLG 118
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 3e-11
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L + N L + L L L+ L L N+L +PP + L K++L +
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLAN 157
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N LT LPA L L +L+ L L N L +P G
Sbjct: 158 NNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKG 190
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
T L +L L L + + G L L LDL NQL +P L L +++ N
Sbjct: 54 YTRLTQLNLDRAELTKL--QVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFN 110
Query: 153 GLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LT LP L L+EL+L N L+ +P G
Sbjct: 111 RLT-SLPLGALRGLGELQELYLKGNELK-TLPPG 142
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-10
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVK 146
G L L L L N L +P L L +LD+ N+LT +P L L +
Sbjct: 71 QVDGTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQE 128
Query: 147 INLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+ L+ N L LP L LE+L L N L +PAG
Sbjct: 129 LYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLT-ELPAG 166
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L LQEL L GN L + P L +L+ L L N LT +P + L L + LQ
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE-LPAGLLNGLENLDTLLLQE 181
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L +P L L N
Sbjct: 182 NSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 69.0 bits (168), Expect = 2e-12
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 17/162 (10%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L L L L L N + + L LK+LK L L N ++ I + +L L + L
Sbjct: 83 LTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSLEHNGISD-ING-LVHLPQLESLYL 138
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
+N +T L L L+ L L+ N++ VP + + +Y S ++L
Sbjct: 139 GNNKITDITV--LSRLTKLDTLSLEDNQISDIVPLAGLT----KLQNLYLSKNHISDLRA 192
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKD 248
L L L V + + L N ++N D
Sbjct: 193 LAGLKNLDVLELFSQECLNKPINHQSNLVVP----NTVKNTD 230
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 1e-11
Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 31/150 (20%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K N+ S+ L + ++I + +++ + + + L + L L N+LT
Sbjct: 23 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT 78
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P + NL L + L N + L + L +L L+ L L+ N +
Sbjct: 79 D-IKP-LTNLKNLGWLFLDENKIK-DLSS-LKDLKKLKSLSLEHNGIS------------ 122
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYN 221
++ GL HL QL+ N
Sbjct: 123 -----------DINGLVHLPQLESLYLGNN 141
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 60.5 bits (146), Expect = 1e-09
Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 29/126 (23%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
+ E I + I P +L +T + L + +I ++ +
Sbjct: 1 MGETITVSTPIKQIFP--DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK 56
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKV 215
+ + L ++ +L L+ N+L ++ L +L L
Sbjct: 57 -SVQG-IQYLPNVTKLFLNGNKLT-----------------------DIKPLTNLKNLGW 91
Query: 216 ADFSYN 221
N
Sbjct: 92 LFLDEN 97
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 18/155 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L+ L L N++ I L L L+L N LT IP L+ L ++ L++
Sbjct: 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV-IPSGAFEYLSKLRELWLRN 156
Query: 152 NGLTGRLPAE-LGNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLC- 208
N + +P+ + SL L L +L+ + G+ G N+ + N+ +
Sbjct: 157 NPIE-SIPSYAFNRVPSLMRLDLGELKKLE-YISEGAFEGLF-NLKYLNLGMCNIKDMPN 213
Query: 209 --HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L L+ + S N + SF G
Sbjct: 214 LTPLVGLEELEMSGNH--------FPEIRPGSFHG 240
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 3e-11
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ + + L L NN+ I L L++L LG N + I L L + L
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLEL 130
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N LT +P+ L L EL L N ++ ++P+ +
Sbjct: 131 FDNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSYA 166
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQS 151
L L+ L L N+ + L L L+ L++ N I P L+ L K+ + +
Sbjct: 195 LFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPE-IRPGSFHGLSSLKKLWVMN 251
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
+ ++ L SL EL+L N L ++P
Sbjct: 252 SQVSLIERNAFDGLASLVELNLAHNNLS-SLPHD 284
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 2e-10
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146
P L L L+EL + GN+ I P L LK L + +Q++ I L LV+
Sbjct: 212 PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL-IERNAFDGLASLVE 270
Query: 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
+NL N L+ LP + L L ELHL N
Sbjct: 271 LNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWN 303
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 21/123 (17%), Positives = 39/123 (31%), Gaps = 32/123 (26%)
Query: 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRL 178
+ + L+ +P I + +NL N + +L LE L L RN +
Sbjct: 55 QFSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI 111
Query: 179 QGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
+ + G+ L+ L + N+ L +PS +
Sbjct: 112 R-QIEVGA--------------------FNGLASLNTLELFDNW--------LTVIPSGA 142
Query: 239 FQG 241
F+
Sbjct: 143 FEY 145
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 5e-12
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L+ L L N++ I L L L+L N+LT IP L+ L ++ L++
Sbjct: 87 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVYLSKLKELWLRN 145
Query: 152 NGLTGRLPAEL-GNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLC- 208
N + +P+ + SL L L RL + G+ G + N+ + + NL +
Sbjct: 146 NPIE-SIPSYAFNRIPSLRRLDLGELKRLS-YISEGAFEGLS-NLRYLNLAMCNLREIPN 202
Query: 209 --HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
L +L D S N L + SFQG
Sbjct: 203 LTPLIKLDELDLSGN--------HLSAIRPGSFQG 229
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
G+ T + L LH N + I L+ L+IL L N + I L L + L
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLEL 119
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N LT +P L L+EL L N ++ ++P+ +
Sbjct: 120 FDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYA 155
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 3e-10
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVK 146
P L L L EL L GN+L I P L L+ L + +Q+ I NL LV+
Sbjct: 201 PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV-IERNAFDNLQSLVE 259
Query: 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
INL N LT LP + L LE +HL N
Sbjct: 260 INLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 8e-07
Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 34/147 (23%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGL 154
++I NL + P G+ ++L+L NQ+ I +L L + L N +
Sbjct: 45 FSKVICVRKNLREV-PD--GISTNTRLLNLHENQIQI-IKVNSFKHLRHLEILQLSRNHI 100
Query: 155 TGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLK 214
L +L L L NRL +P G+ L L +L
Sbjct: 101 RTIEIGAFNGLANLNTLELFDNRLT-TIPNGA-----------------FVYLSKLKEL- 141
Query: 215 VADFSYNFFVGSIPKCLEYLPSTSFQG 241
N +E +PS +F
Sbjct: 142 --WLRNNP--------IESIPSYAFNR 158
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 5e-12
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 22/156 (14%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L+L N+L I + + L+ LDL +N L + + +L L + L +
Sbjct: 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT-LDEFLFSDLQALEVLLLYN 121
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL 210
N + + ++ L++L+L +N++ P + L
Sbjct: 122 NHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVEL-----------------IKDGNKL 162
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQN 246
+L + D S N L+ LP+ G L N
Sbjct: 163 PKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI----GNLTGLVKIN 148
L L+ L+L+ N+++ + + +L+ L L NQ++ P E+ L L+ ++
Sbjct: 111 LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLD 169
Query: 149 LQSNGLTGRLPAELGNLISL--EELHLDRNRLQ 179
L SN L +L L + L+L N L+
Sbjct: 170 LSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 22/140 (15%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAE-LGNLI 166
+P+ L +LDL N L+ + E LT L + L N L + +E +
Sbjct: 33 VPQ--SLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVP 88
Query: 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221
+L L L N L + S + + + ++ + ++QL+ S N
Sbjct: 89 NLRYLDLSSNHLH-TLDEFLFSDLQ-ALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN 146
Query: 222 FFVGSIPKCLEYLPSTSFQG 241
+ P +
Sbjct: 147 Q--------ISRFPVELIKD 158
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 6e-12
Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 19/151 (12%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++ SS+ + LT L +LI NN+ + +L L L +N+LT
Sbjct: 46 SLDCHNSSITDM--TGIEKLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNKLTN- 99
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTAN 193
+ + LT L +N +N LT ++ L L+ RN L + N+
Sbjct: 100 LD--VTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLNCARNTLT-EIDVSHNT----Q 149
Query: 194 IHGMYASSANLT---GLCHLSQLKVADFSYN 221
+ + + +QL D S+N
Sbjct: 150 LTELDCHLNKKITKLDVTPQTQLTTLDCSFN 180
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 1e-11
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 16/136 (11%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
++ T L L N + + ++ K L L+ TN +T ++ L +
Sbjct: 164 LDVTPQTQLTTLDCSFNKITEL---DVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFL 217
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+ SN LT ++ L L N L + + S + ++ +L +
Sbjct: 218 DCSSNKLTE---IDVTPLTQLTYFDCSVNPLT-ELDVSTLS----KLTTLHCIQTDLLEI 269
Query: 208 --CHLSQLKVADFSYN 221
H +QL
Sbjct: 270 DLTHNTQLIYFQAEGC 285
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 15/135 (11%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
++ T L EL H N I + + +L LD N++T + + L ++N
Sbjct: 143 DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLN 197
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL- 207
+N +T +L L I L L N+L + + + S LT L
Sbjct: 198 CDTNNIT-KLD--LNQNIQLTFLDCSSNKLT-EIDVTPLT----QLTYFDCSVNPLTELD 249
Query: 208 -CHLSQLKVADFSYN 221
LS+L
Sbjct: 250 VSTLSKLTTLHCIQT 264
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 15/131 (11%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L L L H +++ + + L L L +N +T ++ T L + SN
Sbjct: 41 LATLTSLDCHNSSITDM--TGIEKLTGLTKLICTSNNITT---LDLSQNTNLTYLACDSN 95
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHL 210
LT L + L L L+ D N+L + N + + + LT + H
Sbjct: 96 KLT-NLD--VTPLTKLTYLNCDTNKLT-KLDVSQNP----LLTYLNCARNTLTEIDVSHN 147
Query: 211 SQLKVADFSYN 221
+QL D N
Sbjct: 148 TQLTELDCHLN 158
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 6e-09
Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 12/128 (9%)
Query: 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155
+ + L L LD + +T I LTGL K+ SN +T
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNNIT 77
Query: 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHLSQL 213
L L +L L D N+L + + + + + LT L L
Sbjct: 78 T-LD--LSQNTNLTYLACDSNKLT-NLDVTPLT----KLTYLNCDTNKLTKLDVSQNPLL 129
Query: 214 KVADFSYN 221
+ + N
Sbjct: 130 TYLNCARN 137
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 8e-09
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
+L T L G I + ++ +L +LD +T + + LV +
Sbjct: 270 DLTHNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLY 324
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L + LT L + + L+ L +Q
Sbjct: 325 LNNTELT-ELD--VSHNTKLKSLSCVNAHIQ 352
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 5e-08
Identities = 28/198 (14%), Positives = 58/198 (29%), Gaps = 44/198 (22%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
++ S + L ++ LT L N L + ++ L +L L L
Sbjct: 216 FLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLTEL---DVSTLSKLTTLHCIQTDLLEI 269
Query: 133 PI------------------PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174
+ ++ + T L ++ Q+ G+T L L L L+L+
Sbjct: 270 DLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLN 326
Query: 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIPKCL 231
L + N+ + + +A++ + L +
Sbjct: 327 NTELT-ELDVSHNT----KLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQ--------T 373
Query: 232 EYLPSTSFQGNCLQNKDP 249
+P + N L
Sbjct: 374 ITMPKETLTNNSLTIAVS 391
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 9e-12
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 14/135 (10%)
Query: 55 ADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKEL 114
ADP CS L PEL ++ + L N++ +
Sbjct: 1 ADPGTSE---CSVIGYNA---ICINRGLHQV--PEL--PAHVNYVDLSLNSIAELNETSF 50
Query: 115 GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELH 172
L+ L+ L + I L+ L+ + L N +L L +LE L
Sbjct: 51 SRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGAFNGLANLEVLT 109
Query: 173 LDRNRLQGA-VPAGS 186
L + L GA +
Sbjct: 110 LTQCNLDGAVLSGNF 124
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-10
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
T L++L L N + I L L L+L N L I + NL L ++L
Sbjct: 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSY 356
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N + L + L +L+EL LD N+L+ +VP G
Sbjct: 357 NHIR-ALGDQSFLGLPNLKELALDTNQLK-SVPDG 389
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 94 TYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSN 152
+ ++ L + + ++ L+ L L N++ I LT L+K+NL N
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQN 333
Query: 153 GLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L + + + NL LE L L N ++ A+ S
Sbjct: 334 FLG-SIDSRMFENLDKLEVLDLSYNHIR-ALGDQS 366
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT+L +L L N L I + L +L++LDL N + + + L L ++ L +
Sbjct: 322 LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LGDQSFLGLPNLKELALDT 380
Query: 152 NGLTGRLPAE-LGNLISLEELHLDRNRLQ 179
N L +P L SL+++ L N
Sbjct: 381 NQLK-SVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 21/169 (12%), Positives = 49/169 (28%), Gaps = 30/169 (17%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI----- 147
L+ + ++ L + LDL N + + KI
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246
Query: 148 NLQSNGLTGRLPAELGNL----------ISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197
+ N + + ++ L ++++ A+ S +T ++ +
Sbjct: 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFT-DLEQL 304
Query: 198 YASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + + L+ L + S NF L + S F+
Sbjct: 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNF--------LGSIDSRMFEN 345
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 1e-11
Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 72/297 (24%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY+G K + V +KE+ F +E A + I H N +LLG C PF
Sbjct: 236 VYEGVWKK-YSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFT 487
++ ++ + G L ++L R +VS + + I+ ++YL H L
Sbjct: 292 --YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNL----- 344
Query: 488 ISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEA 541
+A + E+ K+ DF L+R GA + P SL
Sbjct: 345 ------AARNCLVGENHLVKVADFG-----LSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393
Query: 542 RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSYVVD----- 593
++ +++AFGVLL EI + G P Y ++L +V +
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSP--------------YPGIDLSQVYELLEKDYRME 439
Query: 594 -----PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI-DTSISVEL 644
PE + E++ C + + RPS E+ E ++SIS E+
Sbjct: 440 RPEGCPE----------KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 486
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 65.2 bits (158), Expect = 3e-11
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L + L L N L + P L L+ L++L N L + NL L ++
Sbjct: 457 CHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALE--NVDGVANLPRLQEL 513
Query: 148 NLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQ 179
L +N L A L + L L+L N L
Sbjct: 514 LLCNNRLQQ-SAAIQPLVSCPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG- 132
+++S + L+ L P L L L+ L N L + + L RL+ L L N+L
Sbjct: 467 HLDLSHNRLRA-LPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCNNRLQQS 523
Query: 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168
+ + LV +NLQ N L + L +
Sbjct: 524 AAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 558
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ L + +L L+GN L I P L LK L L L N++ + + +L L ++L
Sbjct: 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSL 119
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
+ NG++ + L +L LE L+L N++ + + + +++
Sbjct: 120 EHNGIS-DING-LVHLPQLESLYLGNNKITDITVLSRLT----KLDTLSLEDNQISDIVP 173
Query: 207 LCHLSQLKVADFSYN 221
L L++L+ S N
Sbjct: 174 LAGLTKLQNLYLSKN 188
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 7e-10
Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 31/150 (20%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K N+ S+ L + ++I + +++ + + + L + L L N+LT
Sbjct: 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT 81
Query: 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
I P + NL L + L N + L + L +L L+ L L+ N +
Sbjct: 82 D-IKP-LANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGIS------------ 125
Query: 192 ANIHGMYASSANLTGLCHLSQLKVADFSYN 221
++ GL HL QL+ N
Sbjct: 126 -----------DINGLVHLPQLESLYLGNN 144
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 8e-09
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 29/129 (22%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ L ++ + L + + + + + I L + K+ L N
Sbjct: 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQG-IQYLPNVTKLFLNGN 78
Query: 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQ 212
LT P L NL +L L LD N+++ +L+ L L +
Sbjct: 79 KLTDIKP--LANLKNLGWLFLDENKVK-----------------------DLSSLKDLKK 113
Query: 213 LKVADFSYN 221
LK +N
Sbjct: 114 LKSLSLEHN 122
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 5e-11
Identities = 52/304 (17%), Positives = 110/304 (36%), Gaps = 71/304 (23%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+ +G+ V+ T ++AV ++ K + F E +
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM--KPGSMS---VEAFLAEANVMK 238
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
+ H+ KL + P ++ ++ + G+L + L E + + + IA
Sbjct: 239 TLQHDKLVKLHAVVTKE-PI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 295
Query: 474 GLKYL------HTELGPPFTISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGT 525
G+ ++ H +L A + ++ K+ DF LAR ++
Sbjct: 296 GMAFIEQRNYIHRDL-----------RAANILVSASLVCKIADFG-----LARVIEDNEY 339
Query: 526 LGSQGA-ICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKD 580
+GA I P ++ ++ ++++FG+LL+EI++ GR P
Sbjct: 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY------------P 387
Query: 581 YLELPEVMSYVVD------PELKHFSYDDLKVIC-----EVVNLCVNPDITKRPSMQELC 629
+ PEV+ + PE C ++ C +RP+ + +
Sbjct: 388 GMSNPEVIRALERGYRMPRPEN-----------CPEELYNIMMRCWKNRPEERPTFEYIQ 436
Query: 630 TMLE 633
++L+
Sbjct: 437 SVLD 440
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 6e-11
Identities = 56/282 (19%), Positives = 100/282 (35%), Gaps = 63/282 (22%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V+ G ++ +AV S +E L+ F +E L + +H N +L+G C + P
Sbjct: 130 VFSGRLRADNTLVAVKSC--RETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
+V + G L E ++ +++V A G++YL
Sbjct: 187 I--YIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLE----------SKC 233
Query: 493 S-----SA--VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI-----LPSSLE 540
+A +TE K+ DF ++R E + S G + P +L
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFG-----MSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSYVVD---- 593
+ ++++FG+LL E S G P Y L + +V
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASP--------------YPNLSNQQTREFVEKGGRL 334
Query: 594 --PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
PEL + ++ C + +RPS + L+
Sbjct: 335 PCPELCP------DAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 7e-11
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+++ N + I + + L +N+L + ++ L L + L+S
Sbjct: 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLRS 114
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N +T + + L S+ L L N++ V G
Sbjct: 115 NRIT-CVGNDSFIGLSSVRLLSLYDNQIT-TVAPG 147
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 1e-08
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 91 GLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
+ Y EL L+ N + L +L+ ++ N++T I +G+ +I
Sbjct: 29 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD-IEEGAFEGASGVNEIL 87
Query: 149 LQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L SN L + ++ L SL+ L L NR+ V S
Sbjct: 88 LTSNRLE-NVQHKMFKGLESLKTLMLRSNRIT-CVGNDS 124
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 65/336 (19%), Positives = 120/336 (35%), Gaps = 81/336 (24%)
Query: 335 DHIYIDSEILKDV--VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE----IAVI 388
D + I E+ + + V Q+ ++G V + +K +AV
Sbjct: 3 DSLGISDELKEKLEDVLIPEQQFT-----LGRMLGKGEFGSVREAQLKQEDGSFVKVAVK 57
Query: 389 SLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASN 444
L K + F RE A + +H + KL+G S R M++ + +
Sbjct: 58 ML--KADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH 115
Query: 445 GTLYEHL----HYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFTISELNSS 494
G L+ L + ++ ++ IA G++YL H +L
Sbjct: 116 GDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDL------------ 163
Query: 495 A---VYLTEDFSPKLVDFDSWKTILARS--EKNPGTLGSQGAICI---LPSSLEARHLDV 546
A L ED + + DF L+R + G + + SL V
Sbjct: 164 AARNCMLAEDMTVCVADFG-----LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTV 218
Query: 547 QGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD------PELK 597
+++AFGV + EI++ G+ P Y + E+ +Y++ P
Sbjct: 219 HSDVWAFGVTMWEIMTRGQTP--------------YAGIENAEIYNYLIGGNRLKQPP-- 262
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ ++ + +++ C + D +RPS L LE
Sbjct: 263 ----ECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L+ + L N + + P L+ L L L N++T +P + L L + L +
Sbjct: 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLFEGLFSLQLLLLNA 113
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N + L + +L +L L L N+LQ + G
Sbjct: 114 NKIN-CLRVDAFQDLHNLNLLSLYDNKLQ-TIAKG 146
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 2e-09
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L + E+ L N + I P K+L+ +DL NQ++ + P+ L L + L
Sbjct: 29 NLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-LAPDAFQGLRSLNSLVL 87
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N +T LP L L SL+ L L+ N++ +
Sbjct: 88 YGNKIT-ELPKSLFEGLFSLQLLLLNANKIN-CLRVD 122
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 2e-08
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L L+L+GN + + L L++L L N++ + + +L L ++L
Sbjct: 79 LRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYD 137
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L L +++ +HL +N
Sbjct: 138 NKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 71/345 (20%), Positives = 122/345 (35%), Gaps = 72/345 (20%)
Query: 328 KKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE--- 384
+ D ++ E+++ V F+ +IG VY GT+
Sbjct: 60 GANTVHIDLSALNPELVQAVQHVVI-GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKI 118
Query: 385 -IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443
AV SL F E + +H N LLG C S + ++V Y
Sbjct: 119 HCAVKSL--NRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMK 174
Query: 444 NGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFTISELNSSA-- 495
+G L + E + + + +A+G+K+L H +L A
Sbjct: 175 HGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDL------------AAR 221
Query: 496 -VYLTEDFSPKLVDFDSWKTILAR----SEKNPGTLGSQGAICI---LPSSLEARHLDVQ 547
L E F+ K+ DF LAR E + + + + SL+ + +
Sbjct: 222 NCMLDEKFTVKVADFG-----LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 276
Query: 548 GNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD------PELKH 598
++++FGVLL E+++ G PP Y ++ ++ Y++ PE
Sbjct: 277 SDVWSFGVLLWELMTRGAPP--------------YPDVNTFDITVYLLQGRRLLQPE--- 319
Query: 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVE 643
+ EV+ C +P RPS EL + + T I
Sbjct: 320 ---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 2e-10
Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 32/154 (20%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L EL L I L+ +++ N + I ++ NL L +I +
Sbjct: 27 DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86
Query: 150 Q-SNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+ +N L + E NL +L+ L + ++ +P
Sbjct: 87 EKANNLL-YINPEAFQNLPNLQYLLISNTGIK-HLPDVHK-------------------- 124
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
H Q + D N + + SF G
Sbjct: 125 IHSLQKVLLDIQDNIN-------IHTIERNSFVG 151
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 6e-08
Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 21/159 (13%)
Query: 93 LTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKI 147
L+++ + N+++ +I L L ++I N L I PE NL L +
Sbjct: 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK--ANNLLY-INPEAFQNLPNLQYL 109
Query: 148 NLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT- 205
+ + G+ LP + + L + N + S G + ++ + +
Sbjct: 110 LISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168
Query: 206 ---GLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ +QL + S N LE LP+ F G
Sbjct: 169 IHNSAFNGTQLDELNLSDN-------NNLEELPNDVFHG 200
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 2e-07
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
GL L L+ N + I + ++ N L +P ++ +G V +++
Sbjct: 151 GLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEE-LPNDVFHGASGPVILDI 209
Query: 150 QSNGLTGRLPAE-LGNLISLEELHLDRNR 177
+ LP+ L NL L +
Sbjct: 210 SRTRIH-SLPSYGLENLKKLRARSTYNLK 237
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 65/343 (18%), Positives = 119/343 (34%), Gaps = 64/343 (18%)
Query: 336 HIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKE- 394
H + +D F + L+ + + +G V + + +K+
Sbjct: 6 HHHAQLYACQDPTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL 60
Query: 395 EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG 454
+H + FQRE+ L ++ + K G + LV +Y +G L + L
Sbjct: 61 QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-R 119
Query: 455 ERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFTISELNSSA---VYLTEDFSPK 505
R ++ +R + I +G++YL H +L A + + + K
Sbjct: 120 HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDL------------AARNILVESEAHVK 167
Query: 506 LVDFDSWKTILAR---SEKNPGTLGSQGAICIL---PSSLEARHLDVQGNIYAFGVLLLE 559
+ DF LA+ +K+ + G I P SL Q ++++FGV+L E
Sbjct: 168 IADFG-----LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 222
Query: 560 IIS-GRPPCC--KDKGNLVDWAKDYLELPEVMSYVVD------PELKHFSYDDLKVIC-- 608
+ + C + ++ +D L ++ + + P C
Sbjct: 223 LFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP-----------ACPA 271
Query: 609 EVVNL---CVNPDITKRPSMQELCTMLEGRIDTSISVELKASS 648
EV L C P RPS L L+ S E A +
Sbjct: 272 EVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFT 314
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 65/339 (19%), Positives = 118/339 (34%), Gaps = 78/339 (23%)
Query: 318 KSKPSIIIPWKKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKG 377
+ K + + E + + +EL+ IG V G
Sbjct: 158 TDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELK-----LLQTIGKGEFGDVMLG 212
Query: 378 TMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437
+G +AV + K F E + + ++ H N +LLG E +
Sbjct: 213 DYRGNK-VAVKCI--KN----DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL-YI 264
Query: 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFTISEL 491
V +Y + G+L ++L R + +K + + ++YL H +L
Sbjct: 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL--------- 315
Query: 492 NSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC-ILPSSLEARHLDVQG 548
+A V ++ED K+ DF L + + + + P +L + +
Sbjct: 316 --AARNVLVSEDNVAKVSDFG-----LTKEA-SSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 549 NIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSYVVD------PELKHF 599
++++FG+LL EI S GR P Y + L +V+ V P+
Sbjct: 368 DVWSFGILLWEIYSFGRVP--------------YPRIPLKDVVPRVEKGYKMDAPDG--- 410
Query: 600 SYDDLKVIC-----EVVNLCVNPDITKRPSMQELCTMLE 633
C +V+ C + D RP+ +L LE
Sbjct: 411 --------CPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 3e-10
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L EL + + + L L L+ L + + L + P+ L ++NL
Sbjct: 30 AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRLSRLNLS 88
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQ 179
N L L + +SL+EL L N L
Sbjct: 89 FNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 1e-05
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 110 IPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167
L + L L + Q + + L L + + +GL + +
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPR 81
Query: 168 LEELHLDRNRLQ 179
L L+L N L+
Sbjct: 82 LSRLNLSFNALE 93
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 4e-10
Identities = 60/305 (19%), Positives = 107/305 (35%), Gaps = 73/305 (23%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+ +G V+ GT G +A IK F +E +
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEAFLQEAQVMK 234
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ HE +L E P +V +Y S G+L + L + + + + IA
Sbjct: 235 KLRHEKLVQLYAVVSEE-PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 474 GLKYL------HTELGPPFTISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGT 525
G+ Y+ H +L A + + E+ K+ DF LAR ++
Sbjct: 292 GMAYVERMNYVHRDL-----------RAANILVGENLVCKVADFG-----LARLIEDNEY 335
Query: 526 LGSQGAICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKD 580
QGA + P + ++ ++++FG+LL E+ + GR P
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP-------------- 381
Query: 581 Y--LELPEVMSYVVD----------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
Y + EV+ V PE + +++ C + +RP+ + L
Sbjct: 382 YPGMVNREVLDQVERGYRMPCPPECPE----------SLHDLMCQCWRKEPEERPTFEYL 431
Query: 629 CTMLE 633
LE
Sbjct: 432 QAFLE 436
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L+ LQ+L+ NL + +G LK LK L++ N + PE NLT L ++L S
Sbjct: 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158
Query: 152 NGLTGRLPAE----LGNLISLE-ELHLDRNRLQGAVPAGS 186
N + + L + L L L N + + G+
Sbjct: 159 NKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGA 196
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
L + L L N L + L++LDL ++ I +L+ L + L
Sbjct: 25 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLIL 83
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQ 179
N + L L SL++L L
Sbjct: 84 TGNPIQ-SLALGAFSGLSSLQKLVAVETNLA 113
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 93 LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----GNLTGL-VK 146
L L+EL + N + E L L+ LDL +N++ I + L +
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCTDLRVLHQMPLLNLS 181
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
++L N + + I L+EL LD N+L+ +VP G
Sbjct: 182 LDLSLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDG 218
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKI----LDLGTNQLTGPIPPEIGNLTGLVKIN 148
LT L+ L L N + I +L +L ++ + LDL N + I P L ++
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLKELA 206
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRN 176
L +N L L SL+++ L N
Sbjct: 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 48/252 (19%), Positives = 89/252 (35%), Gaps = 47/252 (18%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVSWTR 463
QRE NH N +L+ YC L+ + GTL+ + + T
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 464 R--MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +++GI RGL+ +H + +L + + L ++ P L+D S
Sbjct: 134 DQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGS-----MNQAC 185
Query: 522 NPGTLGSQGAICILPSSLEARH----------LDVQGN--------IYAFGVLLLEIISG 563
Q + A+ VQ + +++ G +L ++ G
Sbjct: 186 IHVEGSRQ---ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
Query: 564 RPP--CCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK 621
P KG+ V A V + + P+ S + +++N + D +
Sbjct: 243 EGPYDMVFQKGDSVALA--------VQNQLSIPQSPRHSSA----LWQLLNSMMTVDPHQ 290
Query: 622 RPSMQELCTMLE 633
RP + L + LE
Sbjct: 291 RPHIPLLLSQLE 302
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINL 149
+ ++L L N L + K L +L++L L N+L +P I L L + +
Sbjct: 34 NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWV 92
Query: 150 QSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L++L EL LDRN+L+ ++P
Sbjct: 93 TDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPR 127
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+ L + N L + L L L L NQL +PP + +LT L ++L
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGY 142
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L SL+EL L N+L+ VP G
Sbjct: 143 NELQ-SLPKGVFDKLTSLKELRLYNNQLK-RVPEG 175
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 7e-09
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L EL L N L + P+ L +L L LG N+L +P + LT L ++ L +
Sbjct: 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYN 166
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L R+P L L+ L LD N+L+ VP G
Sbjct: 167 NQLK-RVPEGAFDKLTELKTLKLDNNQLK-RVPEG 199
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L LK L L NQL +P LT L + L +
Sbjct: 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDN 190
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L +L L+ L L N
Sbjct: 191 NQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 5e-10
Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 73/294 (24%)
Query: 374 VYKGTMKGGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V +G +K +AV ++ K ++ + F E A + +H N +LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTM--KLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
Query: 430 SSPFTR---MLVFDYASNGTLYEHL----HYGERCQVSWTRRMKIVIGIARGLKYL---- 478
S M++ + G L+ +L + +K ++ IA G++YL
Sbjct: 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN 167
Query: 479 --HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARS--EKNPGTLGSQGA 531
H +L A L +D + + DF L++ + G
Sbjct: 168 FLHRDL------------AARNCMLRDDMTVCVADFG-----LSKKIYSGDYYRQGRIAK 210
Query: 532 ICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELP 585
+ + SL R + +++AFGV + EI + G P Y ++
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP--------------YPGVQNH 256
Query: 586 EVMSYVVD------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
E+ Y++ PE D L + E++ C D RP+ L LE
Sbjct: 257 EMYDYLLHGHRLKQPE------DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 5e-10
Identities = 60/305 (19%), Positives = 107/305 (35%), Gaps = 73/305 (23%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+ +G V+ GT G +A IK F +E +
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVA-----IKTLKPGTMSPEAFLQEAQVMK 317
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ HE +L E P +V +Y S G+L + L + + + + IA
Sbjct: 318 KLRHEKLVQLYAVVSEE-PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 474 GLKYL------HTELGPPFTISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGT 525
G+ Y+ H +L A + + E+ K+ DF LAR ++
Sbjct: 375 GMAYVERMNYVHRDL-----------RAANILVGENLVCKVADFG-----LARLIEDNEY 418
Query: 526 LGSQGAICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKD 580
QGA + P + ++ ++++FG+LL E+ + GR P
Sbjct: 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP-------------- 464
Query: 581 Y--LELPEVMSYVVD----------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
Y + EV+ V PE + +++ C + +RP+ + L
Sbjct: 465 YPGMVNREVLDQVERGYRMPCPPECPE----------SLHDLMCQCWRKEPEERPTFEYL 514
Query: 629 CTMLE 633
LE
Sbjct: 515 QAFLE 519
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 7e-10
Identities = 47/239 (19%), Positives = 88/239 (36%), Gaps = 45/239 (18%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVF--DYASNGTLYEHL----HYGERCQ 458
F+ E L + H N + + + +V + ++GTL +L +
Sbjct: 72 FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVL 131
Query: 459 VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILA 517
SW R+ I +GL++LHT PP +L +++T S K+ D LA
Sbjct: 132 RSWCRQ------ILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLG-----LA 179
Query: 518 RSEKNPGTLGSQGAICILPSSLE-------ARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
++ G + E D ++YAFG+ +LE+ + P +
Sbjct: 180 TLKRASFAKAVIG-------TPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSEC 232
Query: 571 KGNLVDWAKDYLE-LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ + + P V PE+K + C+ + +R S+++L
Sbjct: 233 QNAAQIYRRVTSGVKPASFDKVAIPEVKEI-----------IEGCIRQNKDERYSIKDL 280
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 8e-10
Identities = 71/338 (21%), Positives = 117/338 (34%), Gaps = 72/338 (21%)
Query: 335 DHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPE----IAVISL 390
D ++ E+++ V F+ +IG VY GT+ AV SL
Sbjct: 3 DLSALNPELVQAVQHVVI-GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL 61
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
F E + +H N LLG C S + ++V Y +G L
Sbjct: 62 --NRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF 117
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFTISELNSSA---VYLTED 501
+ E + + + +A+G+KYL H +L A L E
Sbjct: 118 IR-NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDL------------AARNCMLDEK 164
Query: 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL-------PSSLEARHLDVQGNIYAFG 554
F+ K+ DF LAR + SL+ + + ++++FG
Sbjct: 165 FTVKVADFG-----LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 219
Query: 555 VLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP--EVMSYVVD------PELKHFSYDDLK 605
VLL E+++ G PP Y ++ ++ Y++ PE
Sbjct: 220 VLLWELMTRGAPP--------------YPDVNTFDITVYLLQGRRLLQPE------YCPD 259
Query: 606 VICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVE 643
+ EV+ C +P RPS EL + + T I
Sbjct: 260 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 297
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 1e-09
Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 89 ELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ + T +++ LHG I + L LK K L L TN + +I +L+G+ +
Sbjct: 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-----KISSLSGMENL 72
Query: 148 ---NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204
+L N + ++ +LEEL + N++ +L
Sbjct: 73 RILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-----------------------SL 108
Query: 205 TGLCHLSQLKVADFSYNFFVGSIP-----KCLEYLPSTSFQGNCLQNKDPKQRATT 255
+G+ L L+V S N + + L+ L GN L N + AT+
Sbjct: 109 SGIEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATS 163
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-09
Identities = 50/291 (17%), Positives = 95/291 (32%), Gaps = 62/291 (21%)
Query: 374 VYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V + + +K +++E+ L + HE+ K G C ++
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
+ LV +Y G+L ++L R + + + I G+ YL H +L
Sbjct: 107 AASLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDL--- 160
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILAR---SEKNPGTLGSQGAICIL---P 536
A V L D K+ DF LA+ + G + P
Sbjct: 161 ---------AARNVLLDNDRLVKIGDFG-----LAKAVPEGHEYYRVREDGDSPVFWYAP 206
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSYVVD 593
L+ ++++FGV L E+++ L + + + +
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266
Query: 594 ------PELKHFSYDDLKVIC--EVVNL---CVNPDITKRPSMQELCTMLE 633
P+ C EV +L C + + RP+ + L +L+
Sbjct: 267 GERLPRPD-----------KCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L + L ++ ++ L ++ + + + + + T L +++L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQS-LAG-MQFFTNLKELHL 70
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS---ANLTG 206
N ++ L L +L LEEL ++RNRL+ + ++ + ++ + +
Sbjct: 71 SHNQIS-DLSP-LKDLTKLEELSVNRNRLK-NLNGIPSA----CLSRLFLDNNELRDTDS 123
Query: 207 LCHLSQLKVADFSYN 221
L HL L++ N
Sbjct: 124 LIHLKNLEILSIRNN 138
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 5e-09
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 30/132 (22%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
L LT L+EL ++ N L + + L L L N+L + +L L +++
Sbjct: 81 LKDLTKLEELSVNRNRLKNLNG--IPSAC-LSRLFLDNNELRDTDS--LIHLKNLEILSI 135
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH 209
++N L + LG L LE L L N + N GL
Sbjct: 136 RNNKLK-SIVM-LGFLSKLEVLDLHGNEIT-----------------------NTGGLTR 170
Query: 210 LSQLKVADFSYN 221
L ++ D +
Sbjct: 171 LKKVNWIDLTGQ 182
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 29/124 (23%)
Query: 98 ELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157
E I + + P L +LG +T + L+G+ N ++ +
Sbjct: 1 ESIQRPTPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-S 55
Query: 158 LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVAD 217
L + +L+ELHL N++ +L+ L L++L+
Sbjct: 56 LAG-MQFFTNLKELHLSHNQIS-----------------------DLSPLKDLTKLEELS 91
Query: 218 FSYN 221
+ N
Sbjct: 92 VNRN 95
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149
+ L L L N L L LK L+IL + N+L I +G L+ L ++L
Sbjct: 103 IPSAC-LSRLFLDNNELRDTDS--LIHLKNLEILSIRNNKLKS-IVM-LGFLSKLEVLDL 157
Query: 150 QSNGLTGRLPAELGNLISLEELHLDRNRL 178
N +T L L + + L +
Sbjct: 158 HGNEITNTGG--LTRLKKVNWIDLTGQKC 184
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-09
Identities = 72/300 (24%), Positives = 119/300 (39%), Gaps = 78/300 (26%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESS 431
VY+G K +AV +L KE +E+ F +E A + I H N +LLG C
Sbjct: 29 VYEGVWKKYSLTVAVKTL--KE----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
PF ++ ++ + G L ++L R +VS + + I+ ++YL H +L
Sbjct: 83 PF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL--- 137
Query: 486 FTISELNSSA--VYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICI---LPSSL 539
+A + E+ K+ DF L+R + T + I P SL
Sbjct: 138 --------AARNCLVGENHLVKVADFG-----LSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 540 EARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSYVVD--- 593
++ +++AFGVLL EI + G P Y ++L +V +
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP--------------YPGIDLSQVYELLEKDYR 230
Query: 594 ---PELKHFSYDDLKVIC-----EVVNLCVNPDITKRPSMQELCTMLEGRI-DTSISVEL 644
PE C E++ C + + RPS E+ E ++SIS E+
Sbjct: 231 MERPEG-----------CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 44/232 (18%), Positives = 84/232 (36%), Gaps = 26/232 (11%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR- 464
EV L + H N + + + T +V +Y G L + G + +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 465 -MKIVIGIARGLKYLHTELGPPFTI--SELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
++++ + LK H T+ +L + V+L + KL DF LAR
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG-----LARILN 167
Query: 522 NPGTLGS--QGAICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
+ + G + P + + + +I++ G LL E+ + PP A
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---------A 218
Query: 579 KDYLELPE-VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELC 629
EL + +S + + E++ +N RPS++E+
Sbjct: 219 FSQKELAGKIREGKFRRIPYRYSDE----LNEIITRMLNLKDYHRPSVEEIL 266
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 57/300 (19%), Positives = 114/300 (38%), Gaps = 73/300 (24%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G KG + + IK E + + F E + + N + +LLG +
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 431 SPFTRMLVFDYASNGTLYEHL--------HYGERCQVSWTRRMKIVIGIARGLKYL---- 478
P +++ + + G L +L + S ++ +++ IA G+ YL
Sbjct: 101 QPT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK 158
Query: 479 --HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPG--TLGSQGA 531
H +L A + EDF+ K+ DF + R G +G
Sbjct: 159 FVHRDL------------AARNCMVAEDFTVKIGDFG-----MTRDIYETDYYRKGGKGL 201
Query: 532 ICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP-- 585
+ + P SL+ ++++FGV+L EI + P Y L
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--------------YQGLSNE 247
Query: 586 EVMSYVVD------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639
+V+ +V++ P+ + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 248 QVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 56/289 (19%), Positives = 99/289 (34%), Gaps = 71/289 (24%)
Query: 374 VYKGTMKGGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
VY G + A+ SL F RE + +NH N L+G
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSL--SRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLP 93
Query: 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELG 483
++ Y +G L + + + + + + +ARG++YL H +L
Sbjct: 94 PEG-LPHVLLPYMCHGDLLQFIR-SPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDL- 150
Query: 484 PPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILAR----SEKNPGTLGSQGAICI-- 534
A L E F+ K+ DF LAR E + +
Sbjct: 151 -----------AARNCMLDESFTVKVADFG-----LARDILDREYYSVQQHRHARLPVKW 194
Query: 535 -LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSY 590
SL+ + ++++FGVLL E+++ G PP Y ++ ++ +
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP--------------YRHIDPFDLTHF 240
Query: 591 VVD------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ PE + +V+ C D RP+ + L +E
Sbjct: 241 LAQGRRLPQPE------YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 51/291 (17%), Positives = 100/291 (34%), Gaps = 60/291 (20%)
Query: 374 VYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V + + +K G ++E+ L + HEN K G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
L+ ++ +G+L E+L + +++ +++K + I +G+ YL H +L
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDL--- 152
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILARS-EKNPG--TLGSQGAICI---LP 536
A V + + K+ DF L ++ E + T+ + P
Sbjct: 153 ---------AARNVLVESEHQVKIGDFG-----LTKAIETDKEYYTVKDDRDSPVFWYAP 198
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSYVVD 593
L + ++++FGV L E+++ L + + + +++ + +
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 258
Query: 594 ------PELKHFSYDDLKVIC--EVVNL---CVNPDITKRPSMQELCTMLE 633
P C EV L C + R S Q L E
Sbjct: 259 GKRLPCPP-----------NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-09
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 41/206 (19%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V G +G ++AV + K F E + + ++ H N +LLG E
Sbjct: 37 VMLGDYRG-NKVAVKCI--KN----DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 89
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPFT 487
+V +Y + G+L ++L R + +K + + ++YL H +L
Sbjct: 90 L-YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL----- 143
Query: 488 ISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI---LPSSLEA 541
A V ++ED K+ DF L + + G + + P +L
Sbjct: 144 -------AARNVLVSEDNVAKVSDFG-----LTKEAS---STQDTGKLPVKWTAPEALRE 188
Query: 542 RHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ + ++++FG+LL EI S GR P
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVP 214
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 31/154 (20%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGPIPPEI-GNLTGLVKIN 148
L Q L L +L I L + + + + L + NL+ + I
Sbjct: 28 SLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQ-LESHSFYNLSKVTHIE 86
Query: 149 LQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+++ + + L L L+ L + L+ P +LT +
Sbjct: 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFP-------------------DLTKV 126
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQG 241
+ + + N + +P +FQG
Sbjct: 127 YSTDIFFILEITDN-------PYMTSIPVNAFQG 153
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 6/101 (5%)
Query: 90 LGLLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
+ L + N + IP GL L L N T + N T L +
Sbjct: 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAV 184
Query: 148 NLQSNGLTGRLPAE-LGNLIS-LEELHLDRNRLQGAVPAGS 186
L N + + G + S L + + + A+P+
Sbjct: 185 YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG 224
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 9e-08
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 11/131 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKE--LGLLKRLKILDLGTNQLTGPIPPEI-GNLTG-LVKIN 148
L L+ L + N + + P + IL++ N IP L + +
Sbjct: 104 LPLLKFLGIF-NTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLK 162
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT--- 205
L +NG T + N L+ ++L++N+ + + G + + S ++T
Sbjct: 163 LYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221
Query: 206 --GLCHLSQLK 214
GL HL +L
Sbjct: 222 SKGLEHLKELI 232
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 93 LTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150
T L + L+ N + +I K+ G+ +LD+ +T +P + L L ++ +
Sbjct: 178 GTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSKG--LEHLKELIAR 234
Query: 151 SN 152
+
Sbjct: 235 NT 236
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 1e-08
Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 91 GLLTYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLV 145
+ + L +L + + + +L+L +N LTG + + + L
Sbjct: 397 LMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVL- 455
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
+L +N + +P ++ +L +L+EL++ N+L+ +VP G
Sbjct: 456 --DLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGV 492
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-07
Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 26/113 (23%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI------------ 138
L + L L N++ + ++ L L++L L N++ + +
Sbjct: 49 DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDV 107
Query: 139 ----------GNLTGLVKINLQSNGLTGRLP--AELGNLISLEELHLDRNRLQ 179
+ L ++L N LP E GNL L L L + +
Sbjct: 108 SHNRLQNISCCPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFR 159
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 8e-06
Identities = 22/173 (12%), Positives = 41/173 (23%), Gaps = 19/173 (10%)
Query: 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI 134
+ I+ + L L + + + + I L +
Sbjct: 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH 345
Query: 135 PPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANI 194
+ + +N N T + L L+ L L RN L+ +
Sbjct: 346 MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALM------ 398
Query: 195 HGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNK 247
++S L+ D S N + N N
Sbjct: 399 ------------TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNM 439
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQ 150
L ++ L LH N + IPK++ L+ L+ L++ +NQL +P + LT L I L
Sbjct: 448 LPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLH 505
Query: 151 SN 152
N
Sbjct: 506 DN 507
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
EL L GN ++PKEL K L ++DL N+++ + + N+T L+ + L N L
Sbjct: 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLR 91
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+P L SL L L N + VP G
Sbjct: 92 -CIPPRTFDGLKSLRLLSLHGNDIS-VVPEG 120
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 59/289 (20%), Positives = 106/289 (36%), Gaps = 81/289 (28%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V G KG ++AV + KE G + F +E + +++H K G C + P
Sbjct: 24 VKLGKWKGQYDVAVKMI--KE----GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP 77
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPF 486
+V +Y SNG L +L + ++ +++ + G+ +L H +L
Sbjct: 78 I--YIVTEYISNGCLLNYLR-SHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDL---- 130
Query: 487 TISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP---SSLEA 541
+A + D K+ DF + R + + S G P S+ E
Sbjct: 131 -------AARNCLVDRDLCVKVSDFG-----MTRYVLDDQYVSSVGT--KFPVKWSAPEV 176
Query: 542 ---RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY--LELPEVMSYVVD-- 593
+ +++AFG+L+ E+ S G+ P Y EV+ V
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMP--------------YDLYTNSEVVLKVSQGH 222
Query: 594 ----PELKHFSYDDLKVIC-----EVVNLCVNPDITKRPSMQELCTMLE 633
P L +++ C + KRP+ Q+L + +E
Sbjct: 223 RLYRPHL-----------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 1e-08
Identities = 42/209 (20%), Positives = 78/209 (37%), Gaps = 38/209 (18%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V++G P +AV K + + F +E + + +H + KL+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TEN 463
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
P ++ + + G L L + + + ++ L YL H ++
Sbjct: 464 PV--WIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI--- 517
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICIL---PSS 538
A V ++ + KL DF L+R E + S+G + I P S
Sbjct: 518 ---------AARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 539 LEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ R +++ FGV + EI+ G P
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKP 592
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 58/309 (18%), Positives = 110/309 (35%), Gaps = 81/309 (26%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADL 412
E++ F +G+ +V G +G ++A+ + KE G + F E +
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI--KE----GSMSEDEFIEEAKVM 73
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++HE +L G C + P ++ +Y +NG L +L R + + +++ +
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVC 130
Query: 473 RGLKYL------HTELGPPFTISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPG 524
++YL H +L +A + + K+ DF L+R +
Sbjct: 131 EAMEYLESKQFLHRDL-----------AARNCLVNDQGVVKVSDFG-----LSRYVLDDE 174
Query: 525 TLGSQGAICILP---SSLEA---RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDW 577
S G+ P S E + +I+AFGVL+ EI S G+ P
Sbjct: 175 YTSSVGS--KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----------- 221
Query: 578 AKDY--LELPEVMSYVVD------PELKHFSYDDLKVIC-----EVVNLCVNPDITKRPS 624
Y E ++ P L ++ C + +RP+
Sbjct: 222 ---YERFTNSETAEHIAQGLRLYRPHL-----------ASEKVYTIMYSCWHEKADERPT 267
Query: 625 MQELCTMLE 633
+ L + +
Sbjct: 268 FKILLSNIL 276
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 43/209 (20%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V+ G ++A+ ++ +E G + F E + +++H +L G C E +P
Sbjct: 24 VHLGYWLNKDKVAIKTI--RE----GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 77
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPF 486
LV ++ +G L ++L +R + + + + + G+ YL H +L
Sbjct: 78 I--CLVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL---- 130
Query: 487 TISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP---SSLEA 541
+A + E+ K+ DF + R + S G P +S E
Sbjct: 131 -------AARNCLVGENQVIKVSDFG-----MTRFVLDDQYTSSTGT--KFPVKWASPEV 176
Query: 542 ---RHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-08
Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 38/210 (18%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG E I + IK E + E +A +++ + +LLG C S+
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
L+ G L +++ + + + + IA+G+ YL H +L
Sbjct: 91 V---QLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL--- 143
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGA-ICI---LPS 537
A V + K+ DF LA+ ++G + I
Sbjct: 144 ---------AARNVLVKTPQHVKITDFG-----LAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 538 SLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
S+ R Q +++++GV + E+++ G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 53/312 (16%), Positives = 104/312 (33%), Gaps = 93/312 (29%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
V+ +AV +L KE + FQRE L + H++ + G C
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKAL--KEA--SESARQDFQREAELLTMLQHQHIVRFFGVC 112
Query: 428 RESSPFTRMLVFDYASNGTLYEHL-------------HYGERCQVSWTRRMKIVIGIARG 474
E P ++VF+Y +G L L + + + + +A G
Sbjct: 113 TEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG 170
Query: 475 LKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPG- 524
+ YL H +L A + + K+ DF ++R +
Sbjct: 171 MVYLAGLHFVHRDL------------ATRNCLVGQGLVVKIGDFG-----MSRDIYSTDY 213
Query: 525 -TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAK 579
+G + + I P S+ R + ++++FGV+L EI + G+ P
Sbjct: 214 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP------------- 260
Query: 580 DYLELP--EVMSYVVD----------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQE 627
+ +L E + + P + ++ C + +R S+++
Sbjct: 261 -WYQLSNTEAIDCITQGRELERPRACPP----------EVYAIMRGCWQREPQQRHSIKD 309
Query: 628 LCTMLEGRIDTS 639
+ L+
Sbjct: 310 VHARLQALAQAP 321
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-08
Identities = 53/294 (18%), Positives = 95/294 (32%), Gaps = 73/294 (24%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G + G P +K E + EL F E +++ NH+N + +G +S
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMKIVIGIARGLKYL------H 479
P ++ + + G L L + ++ + + IA G +YL H
Sbjct: 106 LPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 163
Query: 480 TELGPPFTISELNSSA------VYLTEDFSPKLVDFDSWKTILARSEKNPG--TLGSQGA 531
++ A K+ DF +AR G
Sbjct: 164 RDI------------AARNCLLTCPGPGRVAKIGDFG-----MARDIYRASYYRKGGCAM 206
Query: 532 ICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP-- 585
+ + P + + + ++FGVLL EI S G P Y
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--------------YPSKSNQ 252
Query: 586 EVMSYVVD------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
EV+ +V P+ + + ++ C RP+ + +E
Sbjct: 253 EVLEFVTSGGRMDPPK------NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 336 HIYIDSEILKDVVRFSRQ---ELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISL 390
++D +D + + EL+ ++G+ V G +K EI+V
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
+K + T F E + + + +H N +L G +S P M+V +Y NG+L
Sbjct: 80 TLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSF 136
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYL 478
L + Q + + + ++ GIA G+KYL
Sbjct: 137 LRKHDA-QFTVIQLVGMLRGIASGMKYL 163
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 3e-08
Identities = 71/412 (17%), Positives = 131/412 (31%), Gaps = 114/412 (27%)
Query: 290 WLLTL---EIVTGTMVGVL-----FLVAGFTGLQRCKSKPSIIIPWKKSASEKDHIYIDS 341
W L E+V + VL FL++ + PS+ + ++D +Y D+
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIK--TEQRQ-PSM--MTRMYIEQRDRLYNDN 123
Query: 342 EIL-KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEE---- 395
++ K V SR + + + + + L+ G + G G + +C+ +
Sbjct: 124 QVFAKYNV--SRLQPYLKLRQALLELRPAKNVLID-G-VLGSGKTWVALDVCLSYKVQCK 179
Query: 396 -----HW---------TGYLE----LYFQREVADLARINHENTGKL--------LGYCRE 429
W LE L +Q + +R +H + KL L +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 430 SSPFTRML-VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488
S P+ L V N + + C++ T R K V H ++
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLS--CKILLTTRFKQVTDFLSAATTTH------ISL 291
Query: 489 SELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILPSSLEARHLDVQ 547
+ + LT D K++L + + P L + + P
Sbjct: 292 DHHSMT---LTPDEV---------KSLLLKYLDCRPQDLPRE-VLTTNP----------- 327
Query: 548 GNIYAFGVLLLEIISGRPPCCKDKGNLVD-WAK-DYLELPEVM--SY-VVDP-ELKHFSY 601
L II+ +D D W + +L ++ S V++P E + +
Sbjct: 328 --------RRLSIIAES---IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM-F 375
Query: 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM---LEGRIDTSISVELKASSLA 650
D L V P P+ L + + + +L SL
Sbjct: 376 DRLSVF---------PPSAHIPT-ILLSLIWFDVIKSDVMVVVNKLHKYSLV 417
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 2e-06
Identities = 63/414 (15%), Positives = 125/414 (30%), Gaps = 134/414 (32%)
Query: 35 FKEAIYEDPHLVLSN------WNALDADPCHWTGIACSDARDRVLKI--NISGSSLKGFL 86
K YE+ LVL N WNA + ++C ++L +
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFN--------LSC-----KILLTTRFKQ-------V 277
Query: 87 APELGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV 145
L T + H + + + P E LL LK LD L P E+ +
Sbjct: 278 TDFLSAATTTHISLDH--HSMTLTPDEVKSLL--LKYLDCRPQDL----PREV------L 323
Query: 146 KINLQSNGLTGRLPAELGNLISLEE--LHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN 203
N + + + + ++ + H++ ++L + + N A M+
Sbjct: 324 TTNPRRLSIIA---ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF----- 375
Query: 204 LTGLCHLSQLKVADFSYNFFVGSIP-KCLEYL--------PS---TSFQGNCLQNKDPKQ 251
+L V F + IP L + L K PK+
Sbjct: 376 -------DRLSV--FPPS--A-HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 252 RATTLCGGAPPARTRAGLSPKHQAAEDVSKHQS--------ASRPAWLLTLEIVTG---- 299
++ L K + + + H+S + + L +
Sbjct: 424 STISIPSIY--------LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 300 ---------------TMVGVLFLVAGFTGLQRCKSKPSIIIPWKKSASE----------K 334
T+ ++FL F L++ K + W S S K
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRF--LEQ-KIRHDST-AWNASGSILNTLQQLKFYK 531
Query: 335 DHIY----IDSEILKDVVRFSRQ-ELEVACEDFSNIIG---SSPDSLVYKGTMK 380
+I ++ ++ F + E + C +++++ + D +++ K
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 51/405 (12%), Positives = 107/405 (26%), Gaps = 127/405 (31%)
Query: 166 ISLEELHLD-RNRLQGAVPAGSNSGYTANIHGMY-------ASSANLTGLCHLSQLKVAD 217
+S + +L R L PA I G+ A KV
Sbjct: 131 VSRLQPYLKLRQALLELRPAK----NVL-IDGVLGSGKTWVALDV-------CLSYKVQC 178
Query: 218 -FSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPP---ARTRAGLSPKH 273
+ F +L + NC + + L P +R+ + K
Sbjct: 179 KMDFKIF---------WL---NL-KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225
Query: 274 QAAEDVSKH-----QSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCK----SKPSII 324
+ + +S LL L V F CK ++ +
Sbjct: 226 R-IHSIQAELRRLLKSKPYENCLLVLLNVQNAKA-----WNAFNL--SCKILLTTRFKQV 277
Query: 325 IPWKKSASEKDHIYIDSEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGP- 383
+ +A+ HI +D + + E++ + P L + + P
Sbjct: 278 TDFLSAATTT-HISLDHHSMT----LTPDEVK---SLLLKYLDCRPQDLP-REVLTTNPR 328
Query: 384 EIAVISLCIKEE--HWTGYL------------------------ELY-----FQREV--- 409
+++I+ I++ W + +++ F
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388
Query: 410 -ADLARI----NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH-LHYGERCQVSWTR 463
L+ I + ++ + S LV T+ ++ + ++
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYS-----LVEKQPKESTISIPSIYLELKVKL---- 439
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508
LH + + N + ++D P +D
Sbjct: 440 ---------ENEYALHRSI-----VDHYNIPKTFDSDDLIPPYLD 470
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 52/374 (13%), Positives = 103/374 (27%), Gaps = 104/374 (27%)
Query: 16 VLFATCNAFATNEFWALTTFKEAIYEDPHLVLSNWNALD--ADPCHWTGIACSDARDRVL 73
+L T T+ A TT ++ + + L+ + D VL
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISL-DHHSMTLTPDEVKSLLLK---YLDCRPQDLPREVL 323
Query: 74 KIN---IS--GSSLKGFLAPELGLLTYLQELILHGNNLIGII--------PKEL-GLLKR 119
N +S S++ LA + + + L II P E + R
Sbjct: 324 TTNPRRLSIIAESIRDGLA----TWDNWKHVNC--DKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 120 LKILDLGTNQLTGPIPPEI-----GN---------LTGLVK---INLQSNGLTGRLPA-- 160
L + + IP + + + L K + Q T +P+
Sbjct: 378 LSVFPPSAH-----IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432
Query: 161 --ELGNLISLEELH---LDRNRLQGAVPAGS-----NSGYTANIHGMYASSANLTGLCHL 210
L + LH +D + + Y + H + HL
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS-HIGH----------HL 481
Query: 211 SQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQNKDPKQRATTLCGGAPPARTRAGLS 270
++ + F +L F L+ K + + +
Sbjct: 482 KNIEHPE-RMTLF----RMV--FL-DFRF----LEQK--------IRHDSTAWNASGSIL 521
Query: 271 PKHQAAEDVSKHQSASRPAWLLTLEIVTGTMVGVLFLVAGFTGLQRCKSKPSIIIPWKKS 330
Q + + + P E + ++ FL L K ++ +
Sbjct: 522 NTLQQLKFYKPYICDNDP----KYERLVNAILD--FLPKIEENLICSKYT-DLL----RI 570
Query: 331 A--SEKDHIYIDSE 342
A +E + I+ ++
Sbjct: 571 ALMAEDEAIFEEAH 584
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
++L L L + L +L L+L NQL + + +LT L + L +N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LSAGVFDDLTELGTLGLANNQLA 96
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LP + +L L++L+L N+L+ ++P+G
Sbjct: 97 -SLPLGVFDHLTQLDKLYLGGNQLK-SLPSG 125
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 7e-08
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L L L L NQL +P + +LT L K+ L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGG 116
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP+ + L L+EL L+ N+LQ ++PAG
Sbjct: 117 NQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAG 149
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L L L N L + L +L L LG NQL +P + LT L ++ L +
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNT 140
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
N L +PA L +L+ L L N+LQ +VP G+
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGA 174
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L +L L GN L + L +LK L L TNQL IP LT L ++L +
Sbjct: 106 LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKLTNLQTLSLST 164
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N L L L+ + L N
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 38/210 (18%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V+KG E I +CIK E+ + + ++H + +LLG C SS
Sbjct: 29 VHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS 88
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
LV Y G+L +H+ + + + IA+G+ YL H L
Sbjct: 89 L---QLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNL--- 141
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILAR--SEKNPGTLGSQGAICIL---PS 537
A V L ++ DF +A + L S+ I
Sbjct: 142 ---------AARNVLLKSPSQVQVADFG-----VADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 538 SLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
S+ Q +++++GV + E+++ G P
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 54/294 (18%), Positives = 96/294 (32%), Gaps = 73/294 (24%)
Query: 374 VYKGTMKGGPEIAVISLC-IK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
VY+G + G P +K E + EL F E +++ NH+N + +G +S
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 431 SPFTRMLVFDYASNGTLYEHL-----HYGERCQVSWTRRMKIVIGIARGLKYL------H 479
P ++ + + G L L + ++ + + IA G +YL H
Sbjct: 147 LPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 204
Query: 480 TELGPPFTISELNSSA------VYLTEDFSPKLVDFDSWKTILARSEKNPG--TLGSQGA 531
++ A K+ DF +AR G G
Sbjct: 205 RDI------------AARNCLLTCPGPGRVAKIGDFG-----MARDIYRAGYYRKGGCAM 247
Query: 532 ICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP-- 585
+ + P + + + ++FGVLL EI S G P Y
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--------------YPSKSNQ 293
Query: 586 EVMSYVVD------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
EV+ +V P+ + + ++ C RP+ + +E
Sbjct: 294 EVLEFVTSGGRMDPPK------NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 7e-08
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 91 GLLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKIN 148
+ + EL+L+ N L I L G L L L+L NQLTG I P + + ++
Sbjct: 26 DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQ 84
Query: 149 LQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAGS 186
L N + + ++ L L+ L+L N++ V GS
Sbjct: 85 LGENKIK-EISNKMFLGLHQLKTLNLYDNQIS-CVMPGS 121
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L +L +L L N L GI P ++ L LG N++ I ++ L L +NL
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE-ISNKMFLGLHQLKTLNLYD 111
Query: 152 NGLTGRLPAELGNLISLEELHLDRN 176
N ++ +P +L SL L+L N
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASN 136
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 7e-08
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 43/209 (20%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRESSP 432
V+ G G ++AV +K+ G + F E + ++ H+ +L + P
Sbjct: 29 VWMGYYNGHTKVAV--KSLKQ----GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-P 81
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPPF 486
++ +Y NG+L + L +++ + + + IA G+ ++ H +L
Sbjct: 82 I--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL---- 135
Query: 487 TISELNSSA--VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP---SSLEA 541
A + +++ S K+ DF LAR ++ +GA P ++ EA
Sbjct: 136 -------RAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGA--KFPIKWTAPEA 181
Query: 542 ---RHLDVQGNIYAFGVLLLEIIS-GRPP 566
++ ++++FG+LL EI++ GR P
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIP 210
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN-LTGLVKINLQS 151
LT L LIL GN L + L LK L L NQL +P + + LT L +NL
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAH 142
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L +L EL L N+LQ ++P G
Sbjct: 143 NQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPEG 175
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L+EL+L N L + L L L+L NQL +P + LT L +++L
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSY 166
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L L++L L +N+L+ +VP G
Sbjct: 167 NQLQ-SLPEGVFDKLTQLKDLRLYQNQLK-SVPDG 199
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 87 APELGLLTYLQELILHGNNLIGI--IPKELGLLKRLKILDLGTNQLTGPIPPEIG---NL 141
A L + ++I + +++ + I L ++ L LG N+L +I L
Sbjct: 34 AVTQNELNSIDQIIANNSDIKSVQGIQY----LPNVRYLALGGNKLH-----DISALKEL 84
Query: 142 TGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
T L + L N L LP + L +L+EL L N+LQ ++P G
Sbjct: 85 TNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPDG 127
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 8e-08
Identities = 58/312 (18%), Positives = 108/312 (34%), Gaps = 92/312 (29%)
Query: 374 VYKGTMKGGPEIAVISLC----IKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V+ L +K+ T FQRE L + HE+ K G C +
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGD 88
Query: 430 SSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIARGL 475
P ++VF+Y +G L + L + ++ ++ + I IA G+
Sbjct: 89 GDPL--IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM 146
Query: 476 KYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPG-- 524
YL H +L A + + K+ DF ++R +
Sbjct: 147 VYLASQHFVHRDL------------ATRNCLVGANLLVKIGDFG-----MSRDVYSTDYY 189
Query: 525 TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKD 580
+G + I P S+ R + ++++FGV+L EI + G+ P
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP-------------- 235
Query: 581 Y--LELPEVMSYVVD------PELKHFSYDDLKVIC--EVVNL---CVNPDITKRPSMQE 627
+ L EV+ + P + C EV ++ C + +R +++E
Sbjct: 236 WFQLSNTEVIECITQGRVLERPRV-----------CPKEVYDVMLGCWQREPQQRLNIKE 284
Query: 628 LCTMLEGRIDTS 639
+ +L +
Sbjct: 285 IYKILHALGKAT 296
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 8e-08
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG +K + + IK + +T + F E + + +H N +L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P M++ +Y NG L + L + + S + + ++ GIA G+KYL
Sbjct: 120 PM--MIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYL 163
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 60/307 (19%), Positives = 107/307 (34%), Gaps = 93/307 (30%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
VYKG + G +A+ +L K++ G L F+ E AR+ H N LLG
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTL--KDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVV 81
Query: 428 RESSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIAR 473
+ P ++F Y S+G L+E L + + + +V IA
Sbjct: 82 TKDQPL--SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 139
Query: 474 GLKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPG 524
G++YL H +L A V + + + K+ D L R
Sbjct: 140 GMEYLSSHHVVHKDL------------ATRNVLVYDKLNVKISDLG-----LFREVYAAD 182
Query: 525 --TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWA 578
L + I P ++ + +I+++GV+L E+ S G P
Sbjct: 183 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP------------ 230
Query: 579 KDYLELP--EVMSYVVD----------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQ 626
Y +V+ + + P + ++ C N ++RP +
Sbjct: 231 --YCGYSNQDVVEMIRNRQVLPCPDDCPA----------WVYALMIECWNEFPSRRPRFK 278
Query: 627 ELCTMLE 633
++ + L
Sbjct: 279 DIHSRLR 285
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V KG + V +K E L+ E + ++++ +++G C E+
Sbjct: 33 VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ MLV + A G L ++L V +++V ++ G+KYL
Sbjct: 92 W--MLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYL 133
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
L L+EL L N L + L +L +LDLGTNQLT +P + L L ++ +
Sbjct: 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV-LPSAVFDRLVHLKELFMCC 121
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
N LT LP + L L L LD+N+L+ ++P G
Sbjct: 122 NKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHG 153
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 83 KGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNL 141
K + G+ T Q L LH N + + P L LK L LG+NQL +P + +L
Sbjct: 29 KRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSL 87
Query: 142 TGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
T L ++L +N LT LP+ + L+ L+EL + N+L +P G
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 38/210 (18%)
Query: 374 VYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VYKG E I + IK E + E +A +++ + +LLG C S+
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
L+ G L +++ + + + + IA+G+ YL H +L
Sbjct: 91 V---QLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL--- 143
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGA-ICI---LPS 537
A V + K+ DF LA+ ++G + I
Sbjct: 144 ---------AARNVLVKTPQHVKITDFG-----LAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 538 SLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
S+ R Q +++++GV + E+++ G P
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 81 SLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN 140
+G + G+ L L N+L + L L L LG N+L +P + N
Sbjct: 15 YSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFN 73
Query: 141 -LTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LT L +NL +N L LP + L L+EL L+ N+LQ ++P G
Sbjct: 74 KLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDG 118
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQS 151
LT L +L L GN L + L L L+L TNQL +P + LT L ++ L +
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNT 109
Query: 152 NGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
N L LP + L L++L L +N+L+ +VP G
Sbjct: 110 NQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDG 142
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Query: 337 IYIDSEILKDVVRFSRQ---ELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLC 391
Y + ++ R R E+E + IIGS V G ++ G ++ V
Sbjct: 25 FYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84
Query: 392 IKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
+K + T F E + + + +H N +L G M+V +Y NG+L L
Sbjct: 85 LKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA--MIVTEYMENGSLDTFL 141
Query: 452 HYGERCQVSWTRRMKIVIGIARGLKYL 478
+ Q + + + ++ G+ G++YL
Sbjct: 142 RTHDG-QFTIMQLVGMLRGVGAGMRYL 167
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 374 VYKGTMKG--GPEIAVISLCIKEEHWTGYLELY-FQREVADLARINHENTGKLLGYCRES 430
V +G G ++V C+K + + + F REV + ++H N +L G +
Sbjct: 34 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV-LT 92
Query: 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
P +V + A G+L + L + + + +A G+ YL
Sbjct: 93 PPM--KMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYL 137
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Query: 374 VYKGTMKGGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V + + +K+ +H T F+RE+ L + H+N K G C +
Sbjct: 26 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
L+ +Y G+L ++L + ++ + ++ I +G++YL
Sbjct: 86 RNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG 131
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 374 VYKGTMKGGPE-----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCR 428
V + +AV L + + F+RE+ L + H+N K G C
Sbjct: 57 VEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRD--FEREIEILKSLQHDNIVKYKGVCY 112
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ L+ +Y G+L ++L + ++ + ++ I +G++YL
Sbjct: 113 SAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG 162
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 71/311 (22%), Positives = 112/311 (36%), Gaps = 93/311 (29%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
V++ G +AV L KEE + ++ FQRE A +A ++ N KLLG C
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKML--KEEA-SADMQADFQREAALMAEFDNPNIVKLLGVC 119
Query: 428 RESSPFTRMLVFDYASNGTLYEHL----------------------HYGERCQVSWTRRM 465
P L+F+Y + G L E L +S ++
Sbjct: 120 AVGKPM--CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQL 177
Query: 466 KIVIGIARGLKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTIL 516
I +A G+ YL H +L A + E+ K+ DF L
Sbjct: 178 CIARQVAAGMAYLSERKFVHRDL------------ATRNCLVGENMVVKIADFG-----L 220
Query: 517 ARSEKNPG--TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKD 570
+R+ + AI I P S+ + +++A+GV+L EI S G P
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP---- 276
Query: 571 KGNLVDWAKDYLELP--EVMSYVVD------PELKHFSYDDLKVICEVVNLCVNPDITKR 622
Y + EV+ YV D PE + + ++ LC + R
Sbjct: 277 ----------YYGMAHEEVIYYVRDGNILACPE------NCPLELYNLMRLCWSKLPADR 320
Query: 623 PSMQELCTMLE 633
PS + +L+
Sbjct: 321 PSFCSIHRILQ 331
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 6e-07
Identities = 38/315 (12%), Positives = 92/315 (29%), Gaps = 43/315 (13%)
Query: 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLC-IKEEHWTGYLELY-FQR 407
+ E ++ + +++G + VY+ T + +K + E Y +
Sbjct: 57 KTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQ 116
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ---VSWTRR 464
+ L K + +LV + S GTL ++ + +
Sbjct: 117 LMERLKPSMQHMFMKFYSAHLFQNGS--VLVGELYSYGTLLNAINLYKNTPEKVMPQGLV 174
Query: 465 MKIVIGIARGLKYLHTE------LGP--PFTISELNSSAVYLTEDFSPKLVDF----DSW 512
+ + + ++ +H + P + L+D D
Sbjct: 175 ISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSID-- 232
Query: 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG 572
+ + + G C L + + Q + + + ++ G K++G
Sbjct: 233 MKLFPKGTIFTAKCETSGFQC--VEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290
Query: 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVN-PDITKRPSMQELCTM 631
+ + L + E ++ +N PD PS+ L
Sbjct: 291 G---------------ECKPEGLFR--RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK 333
Query: 632 LEGRIDTSISVELKA 646
L+ + +++A
Sbjct: 334 LKKVFQQHYTNKIRA 348
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 38/209 (18%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
V++G P +AV K + + F +E + + +H + KL+G +
Sbjct: 31 VHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVI-TEN 88
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
P ++ + + G L L + + + ++ L YL H ++
Sbjct: 89 PV--WIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDI--- 142
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA-ICIL---PSS 538
A V ++ + KL DF L+R ++ + + I P S
Sbjct: 143 ---------AARNVLVSSNDCVKLGDFG-----LSRYMEDSTYYKASKGKLPIKWMAPES 188
Query: 539 LEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ R +++ FGV + EI+ G P
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKP 217
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 16/111 (14%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 374 VYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427
++KG + E V+ + + H F + +++++H++ G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES--FFEAASMMSKLSHKHLVLNYGVC 81
Query: 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+LV ++ G+L +L + ++ ++++ +A + +L
Sbjct: 82 VCGDEN--ILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFL 129
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 55/306 (17%), Positives = 103/306 (33%), Gaps = 88/306 (28%)
Query: 374 VYKGTMKG--GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431
VY+G G +I V K++ T + F E + ++H + KL+G E
Sbjct: 28 VYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP 86
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL------HTELGPP 485
++ + G L +L + + + + I + + YL H ++
Sbjct: 87 T---WIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI--- 139
Query: 486 FTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP---SSL 539
A + + KL DF L+R ++ + LP S
Sbjct: 140 ---------AVRNILVASPECVKLGDFG-----LSRYIEDEDYYKASVT--RLPIKWMSP 183
Query: 540 EARHL-------DVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLEL--PEVMS 589
E+ + DV + F V + EI+S G+ P + L +V+
Sbjct: 184 ESINFRRFTTASDV----WMFAVCMWEILSFGKQP--------------FFWLENKDVIG 225
Query: 590 YVVD----------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG--RID 637
+ P V+ ++ C + D + RP EL L +++
Sbjct: 226 VLEKGDRLPKPDLCPP----------VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275
Query: 638 TSISVE 643
I++E
Sbjct: 276 KDIAME 281
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLT 155
L L N L + L +L L L NQ+ +P + LT L + L N L
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHENKLQ 89
Query: 156 GRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
LP + L L+EL LD N+L+ +VP G
Sbjct: 90 -SLPNGVFDKLTQLKELALDTNQLK-SVPDG 118
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 374 VYKGTMKGGP-EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V +G + +I V +K+ RE + ++++ +L+G C ++
Sbjct: 26 VRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 83
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
MLV + A G L++ L G+R ++ + +++ ++ G+KYL
Sbjct: 84 L--MLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 126
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 44/241 (18%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR- 464
+E+ L ++NH N K E + +V + A G L + + ++ + R
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNEL--NIVLELADAGDLSRMIKHFKKQKRLIPERT 137
Query: 465 -MKIVIGIARGLKYLHTELGPPFTIS--ELNSSAVYLTEDFSPKLVDF-----DSWKTIL 516
K + + L+++H+ + ++ + V++T KL D S KT
Sbjct: 138 VWKYFVQLCSALEHMHSR-----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192
Query: 517 ARSEKNPGTLGSQGAICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575
A S GT + P + + + +I++ G LL E+ + + P
Sbjct: 193 AHSLV--GT------PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP--------- 235
Query: 576 DWAKDYLELPEVMSYVVD---PEL--KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630
+ D + L + + P L H+S + + ++VN+C+NPD KRP + +
Sbjct: 236 -FYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE----LRQLVNMCINPDPEKRPDVTYVYD 290
Query: 631 M 631
+
Sbjct: 291 V 291
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 3e-06
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 9/96 (9%)
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
A + +EL L G I +I L + +D N++ ++ L +
Sbjct: 12 AAQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEIR-----KLDGFPLLRR 65
Query: 147 ---INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
+ + +N + L L EL L N L
Sbjct: 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 374 VYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V +G + +I V +K+ RE + ++++ +L+G C+ +
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL 410
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
MLV + A G L++ L G+R ++ + +++ ++ G+KYL
Sbjct: 411 ---MLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 452
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 37/259 (14%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
+REVA LA + H N + E+ +V DY G L++ ++ + + +
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSL--YIVMDYCEGGDLFKRINAQKGVLFQEDQIL 128
Query: 466 KIVIGIARGLKYLHTELGPPFTIS--ELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP 523
+ I LK++H I ++ S ++LT+D + +L DF +AR +
Sbjct: 129 DWFVQICLALKHVHDR-----KILHRDIKSQNIFLTKDGTVQLGDFG-----IARVLNST 178
Query: 524 GTLGS--QGAICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPP-CCKDKGNLVD--W 577
L G L P E + + + +I+A G +L E+ + + NLV
Sbjct: 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
Query: 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGR 635
+ + + S +L+ V+ + RPS+ + + R
Sbjct: 239 SGSFPPVSLHYS----YDLRSL-----------VSQLFKRNPRDRPSVNSILEKGFIAKR 283
Query: 636 IDTSISVELKASSLAWAEL 654
I+ +S +L A
Sbjct: 284 IEKFLSPQLIAEEFCLKTF 302
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 56/299 (18%), Positives = 101/299 (33%), Gaps = 82/299 (27%)
Query: 374 VYKGTMKGGPE---IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE 429
V K +K A+ + KE + F E+ L ++ +H N LLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRM--KEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 97
Query: 430 SSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIGIARGL 475
L +YA +G L + L +S + + +ARG+
Sbjct: 98 RGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 155
Query: 476 KYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPGTL 526
YL H +L A + + E++ K+ DF L+R ++
Sbjct: 156 DYLSQKQFIHRDL------------AARNILVGENYVAKIADFG-----LSRGQEVY-VK 197
Query: 527 GSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY- 581
+ G + + SL +++++GVLL EI+S G P Y
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP--------------YC 243
Query: 582 -LELPEVMSYVVD------PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ E+ + P + + +++ C +RPS ++ L
Sbjct: 244 GMTCAELYEKLPQGYRLEKPL------NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 41/244 (16%), Positives = 86/244 (35%), Gaps = 51/244 (20%)
Query: 406 QREVADLARINHEN------------TGKLLGYCRESSPFTRML--VFDYASNGTLYEHL 451
+REV LA+++H N S T+ L ++ GTL + +
Sbjct: 52 EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI 111
Query: 452 HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISE------LNSSAVYLTEDFSPK 505
++ +++ I +G+ Y+H S+ L S ++L + K
Sbjct: 112 EKRRGEKLDKVLALELFEQITKGVDYIH---------SKKLINRDLKPSNIFLVDTKQVK 162
Query: 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRP 565
+ DF T L K + G+ + P + ++ + ++YA G++L E++
Sbjct: 163 IGDF-GLVTSLKNDGKRTRSKGTLRYMS--PEQISSQDYGKEVDLYALGLILAELLHVCD 219
Query: 566 PCCKDKGNLVDWAKDYLELPEVMSYVVDPEL-KHFSYDDLKVICEVVNLCVNPDITKRPS 624
E + + + D + F K ++ ++ RP+
Sbjct: 220 T--------------AFETSKFFTDLRDGIISDIFD-KKEK---TLLQKLLSKKPEDRPN 261
Query: 625 MQEL 628
E+
Sbjct: 262 TSEI 265
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 7e-06
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 96 LQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK---INLQS 151
++EL+L + G I L+ L L L + NL L K + L
Sbjct: 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----SVSNLPKLPKLKKLELSE 80
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQ 179
N + G L L +L L+L N+L+
Sbjct: 81 NRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 7e-06
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Query: 86 LAPELGLLTY--LQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNL- 141
+ EL T ++EL+L + + G + + L+ L LT I NL
Sbjct: 7 IHLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SIANLP 61
Query: 142 --TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179
L K+ L N ++G L +L L+L N+++
Sbjct: 62 KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 37/252 (14%), Positives = 76/252 (30%), Gaps = 54/252 (21%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRM----------LVFDYASNGTLYEHLHYGE 455
REV LA++ H + E + ++ + L + ++
Sbjct: 51 MREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN--G 108
Query: 456 RCQVSWTRR---MKIVIGIARGLKYLHTELGPPFTISE------LNSSAVYLTEDFSPKL 506
RC + R + I + IA +++LH S+ L S ++ T D K+
Sbjct: 109 RCTIEERERSVCLHIFLQIAEAVEFLH---------SKGLMHRDLKPSNIFFTMDDVVKV 159
Query: 507 VDF-----DSWKTILARSEKNPGTLGSQGAIC-----ILPSSLEARHLDVQGNIYAFGVL 556
DF + P + + +I++ G++
Sbjct: 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLI 219
Query: 557 LLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVN 616
L E++ P + + L +V + P +V ++
Sbjct: 220 LFELL--YPFSTQMERVRT--------LTDVRNLKFPPLFTQKYPC----EYVMVQDMLS 265
Query: 617 PDITKRPSMQEL 628
P +RP +
Sbjct: 266 PSPMERPEAINI 277
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRR 464
+ E+ + I +E G + + ++++Y N ++ + Y ++T
Sbjct: 91 KNELQIITDIKNEYCLTCEGII-TNY--DEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 465 M------KIVIGIARGLKYLHTELG 483
+ I+ + Y+H E
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN 172
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 43/257 (16%), Positives = 78/257 (30%), Gaps = 71/257 (27%)
Query: 406 QREVADLARI-NHENTGKLLGYCRESSPFTRMLVF-DYASNGTLYEHL--HYGERCQVSW 461
REV A + H + + E ML+ +Y + G+L + + +Y
Sbjct: 58 LREVYAHAVLGQHSHVVRYFSAWAED---DHMLIQNEYCNGGSLADAISENYRIMSYFKE 114
Query: 462 TRRMKIVIGIARGLKYLH----------------TELGPPFTISELNSSAVYLTEDFSPK 505
+++ + RGL+Y+H + P SE + + K
Sbjct: 115 AELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174
Query: 506 LVDFDSWKTILARSEKNPGTL-GS---------QGAICILPSSLEARHLDVQGNIYAFGV 555
+ D +P G Q LP + D I+A +
Sbjct: 175 IGDLG-----HVTRISSPQVEEGDSRFLANEVLQENYTHLPKA------D----IFALAL 219
Query: 556 LLLEIISGRPPCCKDKGNLVDWAK----DYLELPEVMSYVVDPELKHFSYDDLKVICEVV 611
++ P N W + +P+V+S E +
Sbjct: 220 TVVCAAGAEPLP----RNGDQWHEIRQGRLPRIPQVLS----QEFTEL-----------L 260
Query: 612 NLCVNPDITKRPSMQEL 628
+ ++PD +RPS L
Sbjct: 261 KVMIHPDPERRPSAMAL 277
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 61/287 (21%), Positives = 104/287 (36%), Gaps = 58/287 (20%)
Query: 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
+GS V K E A+ I++ + EVA L ++H N
Sbjct: 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIK--IIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHL----HYGERCQVSWTRRMKIVIGIARGL 475
KL + + + LV + G L++ + + E + I+ + G+
Sbjct: 98 IMKLYDFFEDKRNYY--LVMECYKGGELFDEIIHRMKFNEV-DAA-----VIIKQVLSGV 149
Query: 476 KYLHT------ELGPPFTISE---LNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL 526
YLH +L P E L S +D K+VDF + +K L
Sbjct: 150 TYLHKHNIVHRDLKP-----ENLLLESKE----KDALIKIVDFGL-SAVFENQKKMKERL 199
Query: 527 GSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL-P 585
G+ A I P L + D + ++++ GV+L +++G PP + E+
Sbjct: 200 GT--AYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPF---------GGQTDQEILR 247
Query: 586 EVMSYVVD---PELKHFSYD--DLKVICEVVNLCVNPDITKRPSMQE 627
+V PE K+ S DL + + D +R S Q+
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDL------IKQMLQFDSQRRISAQQ 288
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 5e-05
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 31/174 (17%)
Query: 466 KIVIGIARGLKYLHTELGPPFTIS-ELNSSAVYLTEDFSPKLVDFD-SWKTILARSEKNP 523
K+ + I + L YL + G I ++ S + L E KL DF S L +
Sbjct: 128 KMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGIS--GRLVDDKAKD 182
Query: 524 GTLGSQGAIC---ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD 580
+ G + I P D++ ++++ G+ L+E+ +G+ P K +
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF------ 236
Query: 581 YLELPEVMSYVVD---PELK---HFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
EV++ V+ P L FS V C+ D KRP +L
Sbjct: 237 -----EVLTKVLQEEPPLLPGHMGFS----GDFQSFVKDCLTKDHRKRPKYNKL 281
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 32/179 (17%), Positives = 54/179 (30%), Gaps = 46/179 (25%)
Query: 405 FQREVADLARINHEN------TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ 458
E LA + H + + + + +V +Y +L +
Sbjct: 126 AMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY---IVMEYVGGQSLKRSK----GQK 178
Query: 459 VSWTRRMKIVIGIARGLKYLHTELG-------PPFTISELNSSAVYLTEDFSPKLVDFDS 511
+ + ++ I L YLH +G P N + LTE+ KL+D
Sbjct: 179 LPVAEAIAYLLEILPALSYLH-SIGLVYNDLKPE------N---IMLTEE-QLKLIDLG- 226
Query: 512 WKTILARSEKNPGTLGSQGAICILPS--SLE-AR-HLDVQGNIYAFGVLLLEIISGRPP 566
+ S G + P + E R V +IY G L + P
Sbjct: 227 ----AVS------RINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPT 275
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 44.2 bits (103), Expect = 1e-04
Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 13/108 (12%)
Query: 76 NISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELG---LLKRLKILDLGTNQL 130
+ P L+ L + ++ + +L +L+ +D+ L
Sbjct: 232 DYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291
Query: 131 TG----PIPPEIGNLTGLVKINLQSNGLTG----RLPAELGNLISLEE 170
T + + + L IN++ N L+ L L I + +
Sbjct: 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSD 339
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 1e-04
Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 30/175 (17%)
Query: 64 ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH-------GNNLIGIIPKEL-- 114
+ L+I G L L++L+L+ + + +
Sbjct: 189 KKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248
Query: 115 GLLKRLKILDLGTNQLTGPIPPEIGN---LTGLVKINLQSNGLTGR----LPAELGNLIS 167
LK L + + + L L +++ + LT L + +
Sbjct: 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKH 308
Query: 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNF 222
L+ +++ N L +L +S + D Y++
Sbjct: 309 LKFINMKYNYLSDE--------------MKKELQKSLPMKIDVSDSQEYDDDYSY 349
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 34/180 (18%), Positives = 71/180 (39%), Gaps = 44/180 (24%)
Query: 405 FQREVADLARINHEN------TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ 458
F+REV + ++++H+N + + + LV +Y TL E++
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDE-----EDDCYY---LVMEYIEGPTLSEYIE--SHGP 107
Query: 459 VSWTRRMKIVIGIARGLKYLHTELG-------PPFTISELNSSAVYLTEDFSPKLVDFDS 511
+S + I G+K+ H ++ P N + + + + K+ DF
Sbjct: 108 LSVDTAINFTNQILDGIKHAH-DMRIVHRDIKPQ------N---ILIDSNKTLKIFDFG- 156
Query: 512 WKTILARSEKNPGTLGSQGAIC-----ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+A++ + +L + P + D +IY+ G++L E++ G PP
Sbjct: 157 ----IAKA-LSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 61/314 (19%), Positives = 102/314 (32%), Gaps = 99/314 (31%)
Query: 374 VYKGTMKGGPEIAVISLC----IKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V K T A + +KE + E L ++NH + KL G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97
Query: 430 SSPFTRMLVFDYASNGTLYEHL----------------------HYGERCQVSWTRRMKI 467
P +L+ +YA G+L L + + ++ +
Sbjct: 98 DGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISF 155
Query: 468 VIGIARGLKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILAR 518
I++G++YL H +L A + + E K+ DF L+R
Sbjct: 156 AWQISQGMQYLAEMKLVHRDL------------AARNILVAEGRKMKISDFG-----LSR 198
Query: 519 SEKNPG--TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572
SQG I + SL Q ++++FGVLL EI++ G P
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP------ 252
Query: 573 NLVDWAKDY--LELPEVMSYVVD------PELKHFSYDDLKVIC--EVVNL---CVNPDI 619
Y + + + + P+ C E+ L C +
Sbjct: 253 --------YPGIPPERLFNLLKTGHRMERPDN-----------CSEEMYRLMLQCWKQEP 293
Query: 620 TKRPSMQELCTMLE 633
KRP ++ LE
Sbjct: 294 DKRPVFADISKDLE 307
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 32/295 (10%), Positives = 63/295 (21%), Gaps = 58/295 (19%)
Query: 372 SLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
S+V+ + A+ + E+ LE AR+ E+ + R
Sbjct: 76 SVVFLVRDVERLEDFALKVFTMGAENSRSELER-LHEATFAAARLLGESPEEARDRRRLL 134
Query: 431 SPF------------------------TRMLVFDYA--SNGTLYEHLHYGERCQ--VSWT 462
P +L+ A L+ L + +
Sbjct: 135 LPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194
Query: 463 RRMKIVIGIARGLKYLHTE------LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516
+ + R L ++ P +++ D L D
Sbjct: 195 ALHILTAQLIRLAANLQSKGLVHGHFTP---------DNLFIMPDGRLMLGDVS-----A 240
Query: 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQG---NIYAFGVLLLEIISGRPPCCKDKGN 573
G S + P N + G+ + + P
Sbjct: 241 LWKVGTRGP-ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299
Query: 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ K + +I L + +R E
Sbjct: 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRF--LNFDRR--RRLLPLEA 350
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 66/321 (20%), Positives = 117/321 (36%), Gaps = 98/321 (30%)
Query: 374 VYKGTMKGGPE--------IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLL 424
V G + +AV L K++ T E+ + I H+N LL
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKML--KDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLL 107
Query: 425 GYCRESSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIG 470
G C + P ++ +YAS G L E+L + Q+++ +
Sbjct: 108 GACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 471 IARGLKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEK 521
+ARG++YL H +L A V +TE+ K+ DF LAR
Sbjct: 166 LARGMEYLASQKCIHRDL------------AARNVLVTENNVMKIADFG-----LARDIN 208
Query: 522 NPG--TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV 575
N + G + + P +L R Q ++++FGVL+ EI + G P
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------- 259
Query: 576 DWAKDY--LELPEVMSYVVD------PELKHFSYDDLKVIC--EVVNL---CVNPDITKR 622
Y + + E+ + + P C E+ + C + ++R
Sbjct: 260 -----YPGIPVEELFKLLKEGHRMDKPAN-----------CTNELYMMMRDCWHAVPSQR 303
Query: 623 PSMQELCTMLEGRIDTSISVE 643
P+ ++L L+ + + + E
Sbjct: 304 PTFKQLVEDLDRILTLTTNEE 324
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 44/291 (15%), Positives = 93/291 (31%), Gaps = 68/291 (23%)
Query: 367 GSSPDSLVYKGTMKGGPEIAV--ISLC-IKEEHWTGYLELYFQREVADLARINHENTG-- 421
G S S V++ + A+ ++L + Y + E+A L ++ +
Sbjct: 39 GGS--SKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY-----RNEIAYLNKLQQHSDKII 91
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L Y +V + N L L + + + + +H
Sbjct: 92 RLYDYEITDQYI--YMVMECG-NIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQH 146
Query: 482 ------LGPPFTISELNSSAVYLTEDFSPKLVDF-------DSWKTILARSEKNPGTLG- 527
L P A +L D KL+DF +++ S+ GT+
Sbjct: 147 GIVHSDLKP----------ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQV--GTVNY 194
Query: 528 -----SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-----VDW 577
+ + + + ++++ G +L + G+ P + + +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+E P++ +L+ LK L +P +R S+ EL
Sbjct: 255 PNHEIEFPDIPE----KDLQDV----LKCC-----LKRDPK--QRISIPEL 290
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 47/263 (17%), Positives = 87/263 (33%), Gaps = 71/263 (26%)
Query: 406 QREVADLARINHEN-----------TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-- 452
EV LA +NH+ + T + +Y NGTLY+ +H
Sbjct: 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE 109
Query: 453 --YGERCQVSWTRRMKIVIGIARGLKYLHTE------LGPPFTISELNSSAVYLTEDFSP 504
+R + ++ I L Y+H++ L P N +++ E +
Sbjct: 110 NLNQQRDEY-----WRLFRQILEALSYIHSQGIIHRDLKPM------N---IFIDESRNV 155
Query: 505 KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARH------------LDVQGN--- 549
K+ DF LA++ + + + SS LD G+
Sbjct: 156 KIGDFG-----LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 550 ---IYAFGVLLLEIISGRPPCCKDKGNLVDWAKD-YLELPEVMSYVVDPELKHFSYDDLK 605
+Y+ G++ E+I ++ N++ + +E P K
Sbjct: 211 KIDMYSLGIIFFEMIYP-FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKI------ 263
Query: 606 VICEVVNLCVNPDITKRPSMQEL 628
+ L ++ D KRP + L
Sbjct: 264 -----IRLLIDHDPNKRPGARTL 281
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 4e-04
Identities = 66/321 (20%), Positives = 117/321 (36%), Gaps = 98/321 (30%)
Query: 374 VYKGTMKGGPE--------IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLL 424
V G + +AV L K++ T E+ + I H+N LL
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKML--KDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLL 153
Query: 425 GYCRESSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIG 470
G C + P ++ +YAS G L E+L + Q+++ +
Sbjct: 154 GACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 211
Query: 471 IARGLKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEK 521
+ARG++YL H +L A V +TE+ K+ DF LAR
Sbjct: 212 LARGMEYLASQKCIHRDL------------AARNVLVTENNVMKIADFG-----LARDIN 254
Query: 522 NPG--TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV 575
N + G + + P +L R Q ++++FGVL+ EI + G P
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP--------- 305
Query: 576 DWAKDY--LELPEVMSYVVD------PELKHFSYDDLKVIC--EVVNL---CVNPDITKR 622
Y + + E+ + + P C E+ + C + ++R
Sbjct: 306 -----YPGIPVEELFKLLKEGHRMDKPAN-----------CTNELYMMMRDCWHAVPSQR 349
Query: 623 PSMQELCTMLEGRIDTSISVE 643
P+ ++L L+ + + + E
Sbjct: 350 PTFKQLVEDLDRILTLTTNEE 370
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 56/187 (29%)
Query: 466 KIVIGIARGLKYLHTELG-------PPFTISELNSSAVYLTEDFSPKLVDFD-SWKTILA 517
KI + + L +L L P S + L + KL DF S L
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKP---------SNILLDRSGNIKLCDFGIS--GQLV 177
Query: 518 RSEKNPGTLGSQGAIC--------ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCK 569
S G C I PS+ + DV+ ++++ G+ L E+ +GR P K
Sbjct: 178 DSIAKTRDAG-----CRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGRFPYPK 231
Query: 570 DKGNLVDWAKDYLELPEVMSYVVD---PELK-----HFSYDDLKVICEVVNLCVNPDITK 621
+ ++ VV P+L FS VNLC+ D +K
Sbjct: 232 WNSVF-----------DQLTQVVKGDPPQLSNSEEREFS----PSFINFVNLCLTKDESK 276
Query: 622 RPSMQEL 628
RP +EL
Sbjct: 277 RPKYKEL 283
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 40/181 (22%)
Query: 405 FQREVADLARINHEN------TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ 458
F+RE + A +NH TG+ P+ +V +Y TL + +H
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETP-AGPLPY---IVMEYVDGVTLRDIVH--TEGP 112
Query: 459 VSWTRRMKIVIGIARGLKYLHTELG-------PPFTISELNSSAVYLTEDFSPKLVDFDS 511
++ R ++++ + L + H + G P N + ++ + K++DF
Sbjct: 113 MTPKRAIEVIADACQALNFSH-QNGIIHRDVKPA------N---IMISATNAVKVMDFG- 161
Query: 512 WKTILARS-EKNPGTLGSQGAIC-----ILPSSLEARHLDVQGNIYAFGVLLLEIISGRP 565
+AR+ + ++ A+ + P +D + ++Y+ G +L E+++G P
Sbjct: 162 ----IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
Query: 566 P 566
P
Sbjct: 218 P 218
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 59/305 (19%), Positives = 99/305 (32%), Gaps = 89/305 (29%)
Query: 374 VYKGTMKGGPE------IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGY 426
V + T G + +AV L K + E+ ++ + HEN LLG
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKML--KSTA-HADEKEALMSELKIMSHLGQHENIVNLLGA 118
Query: 427 CRESSPFTRMLVFDYASNGTLYEHL------------HYGERCQVSWTRRMKIVIGIARG 474
C P +++ +Y G L L S + +A+G
Sbjct: 119 CTHGGPV--LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG 176
Query: 475 LKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEKNPG- 524
+ +L H ++ A V LT K+ DF LAR N
Sbjct: 177 MAFLASKNCIHRDV------------AARNVLLTNGHVAKIGDFG-----LARDIMNDSN 219
Query: 525 -TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAK 579
+ + + P S+ VQ +++++G+LL EI S G P N
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN------ 273
Query: 580 DYLELPEVMSYVVD------PELKHFSYDDLKVIC--EVVNL---CVNPDITKRPSMQEL 628
+ V D P + ++ C + T RP+ Q++
Sbjct: 274 -----SKFYKLVKDGYQMAQPAF-----------APKNIYSIMQACWALEPTHRPTFQQI 317
Query: 629 CTMLE 633
C+ L+
Sbjct: 318 CSFLQ 322
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 42/291 (14%), Positives = 92/291 (31%), Gaps = 68/291 (23%)
Query: 367 GSSPDSLVYKGTMKGGPEIAV--ISLC-IKEEHWTGYLELYFQREVADLARINHENTG-- 421
G S S V++ + A+ ++L + Y + E+A L ++ +
Sbjct: 20 GGS--SKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY-----RNEIAYLNKLQQHSDKII 72
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L Y +V + N L L + + + + +H
Sbjct: 73 RLYDYEITDQYI--YMVMECG-NIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQH 127
Query: 482 ------LGPPFTISELNSSAVYLTEDFSPKLVDF-------DSWKTILARSEKNPGTLG- 527
L P A +L D KL+DF +++ S+ GT+
Sbjct: 128 GIVHSDLKP----------ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQV--GTVNY 175
Query: 528 -----SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-----VDW 577
+ + + + ++++ G +L + G+ P + + +
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235
Query: 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+E P++ +L+ + C+ D +R S+ EL
Sbjct: 236 PNHEIEFPDIPE----KDLQDV-----------LKCCLKRDPKQRISIPEL 271
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 41/291 (14%), Positives = 91/291 (31%), Gaps = 68/291 (23%)
Query: 367 GSSPDSLVYKGTMKGGPEIAV--ISLC-IKEEHWTGYLELYFQREVADLARINHENTG-- 421
G S S V++ + A+ ++L + Y + E+A L ++ +
Sbjct: 67 GGS--SKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY-----RNEIAYLNKLQQHSDKII 119
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L Y +V + N L L + + + + +H
Sbjct: 120 RLYDYEITDQYI--YMVMECG-NIDLNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQH 174
Query: 482 ------LGPPFTISELNSSAVYLTEDFSPKLVDF-------DSWKTILARSEKNPGTLG- 527
L P A +L D KL+DF +++ S+ G +
Sbjct: 175 GIVHSDLKP----------ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQV--GAVNY 222
Query: 528 -----SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-----VDW 577
+ + + + ++++ G +L + G+ P + + +
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+E P++ +L+ + C+ D +R S+ EL
Sbjct: 283 PNHEIEFPDIPE----KDLQDV-----------LKCCLKRDPKQRISIPEL 318
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 68/322 (21%), Positives = 116/322 (36%), Gaps = 98/322 (30%)
Query: 374 VYKGTMKGGP--------EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLL 424
V G ++AV L K + T E+ + I H+N LL
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKML--KSDA-TEKDLSDLISEMEMMKMIGKHKNIINLL 141
Query: 425 GYCRESSPFTRMLVFDYASNGTLYEHL--------------HYGERCQVSWTRRMKIVIG 470
G C + P ++ +YAS G L E+L + Q+S +
Sbjct: 142 GACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 199
Query: 471 IARGLKYL------HTELGPPFTISELNSSA---VYLTEDFSPKLVDFDSWKTILARSEK 521
+ARG++YL H +L A V +TED K+ DF LAR
Sbjct: 200 VARGMEYLASKKCIHRDL------------AARNVLVTEDNVMKIADFG-----LARDIH 242
Query: 522 NPG--TLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV 575
+ + G + + P +L R Q ++++FGVLL EI + G P
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------- 293
Query: 576 DWAKDY--LELPEVMSYVVD------PELKHFSYDDLKVIC--EVVNL---CVNPDITKR 622
Y + + E+ + + P C E+ + C + ++R
Sbjct: 294 -----YPGVPVEELFKLLKEGHRMDKPSN-----------CTNELYMMMRDCWHAVPSQR 337
Query: 623 PSMQELCTMLEGRIDTSISVEL 644
P+ ++L L+ + + + E+
Sbjct: 338 PTFKQLVEDLDRIVALTSNQEM 359
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 39/258 (15%), Positives = 77/258 (29%), Gaps = 56/258 (21%)
Query: 406 QREVADLARI-NHENTGKLLGYCRESS-----PFTRMLVFDYASNGTLYEHLHYGERCQV 459
+EV + ++ H N + L+ G L E L ++
Sbjct: 73 IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-----KM 127
Query: 460 SWTRRM------KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513
+ KI R ++++H PP +L + L+ + KL DF S
Sbjct: 128 ESRGPLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGS-- 184
Query: 514 TILARSEKNPGTLGSQGAICILPSSLEARH----------LDVQGN--------IYAFGV 555
A + + L R+ +D+ N I+A G
Sbjct: 185 ---ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGC 241
Query: 556 LLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCV 615
+L + + P + G + +P + Y ++ +
Sbjct: 242 ILYLLCFRQHPF--EDGAKLRIVNGKYSIPPHDTQ----------YTVFH---SLIRAML 286
Query: 616 NPDITKRPSMQELCTMLE 633
+ +R S+ E+ L+
Sbjct: 287 QVNPEERLSIAEVVHQLQ 304
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 658 | |||
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.96 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.96 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.94 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.93 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.93 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.93 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.93 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.88 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.86 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.84 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.84 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.84 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.81 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.8 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.8 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.78 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.78 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.77 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.77 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.77 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.76 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.76 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.76 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.76 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.76 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.75 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.75 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.75 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.75 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.75 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.75 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.74 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.74 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.74 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.74 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.74 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.73 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.73 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.73 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.73 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.73 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.73 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.72 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.72 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.72 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.72 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.72 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.71 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.71 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.71 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.71 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.71 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.71 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.71 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.7 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.7 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.7 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.7 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.7 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.69 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.69 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.69 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.69 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.69 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.69 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.69 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.68 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.68 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.67 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.67 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.67 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.67 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.66 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.66 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.66 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.65 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.64 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.64 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.64 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.63 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.63 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.63 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.63 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.63 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.63 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.62 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.62 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.62 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.62 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.61 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.61 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.61 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.6 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.6 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.6 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.59 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.58 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.58 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.58 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.58 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.58 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.57 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.57 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.56 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.56 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.55 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.55 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.55 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.55 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.54 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.54 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.54 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.53 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.52 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.52 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.52 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.51 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.5 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.48 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.48 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.48 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.48 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.48 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.48 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.47 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.47 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.46 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.45 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.45 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.45 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.44 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.38 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.37 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.26 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.24 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.24 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.23 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.2 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.14 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.11 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.95 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.94 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.9 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.84 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.66 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.65 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.6 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.6 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.56 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.46 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.44 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.43 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.38 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.34 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.33 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.28 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.28 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.27 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.23 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.23 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.19 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.1 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.01 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.0 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.91 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.89 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.7 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.61 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.36 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.34 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.33 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.23 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.19 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.07 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.06 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.92 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.82 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 96.81 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.78 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.72 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.7 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.66 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 96.37 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.09 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.07 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 95.9 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 95.88 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 95.6 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.56 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 95.52 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 95.28 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 94.4 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 93.33 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 91.71 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 86.58 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 85.89 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 83.7 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 81.34 |
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-57 Score=461.98 Aligned_cols=264 Identities=21% Similarity=0.319 Sum_probs=213.1
Q ss_pred HHHHHHhhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE
Q 006178 354 ELEVACEDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (658)
Q Consensus 354 ~l~~~~~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 427 (658)
|+..++..|.+.||+|+||+||+|++. +++.||||++.... .....++|.+|+.++++++|||||+++|+|
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~ 98 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVV 98 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEE
Confidence 334445567789999999999999973 46789999985432 223456899999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCC
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp 493 (658)
.+.+ ..+||||||++|||.++|..+. ...++|.++.+|+.|||+||+|||++ +||||||||
T Consensus 99 ~~~~--~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~ 173 (308)
T 4gt4_A 99 TKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLAT 173 (308)
T ss_dssp CSSS--SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EECC--EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccc
Confidence 9877 6699999999999999996432 23589999999999999999999999 999999999
Q ss_pred cceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC
Q 006178 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572 (658)
Q Consensus 494 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~ 572 (658)
+|||+++++++||+|||+|+.+.............+++.|||||++.++.|+.++|||||||++|||+| |+.||.+...
T Consensus 174 ~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp GGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred cceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987754433333333445678999999999999999999999999999999 8999975442
Q ss_pred cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+...... .....+.+..++..+.+|+.+||+.||++||||.||++.|+...+
T Consensus 254 --~~~~~~i~----------~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 254 --QDVVEMIR----------NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp --HHHHHHHH----------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred --HHHHHHHH----------cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 12221111 111223344566778999999999999999999999999987643
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-56 Score=453.86 Aligned_cols=256 Identities=20% Similarity=0.302 Sum_probs=207.4
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||+||+|++. ++..||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~ 90 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PL 90 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SE
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--EE
Confidence 4589999999999999874 3678999998432 2344678999999999999999999999999877 67
Q ss_pred EEEEEecCCCChhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCc
Q 006178 436 MLVFDYASNGTLYEHLHYGE-----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 504 (658)
+||||||++|||.++|+..+ ...++|.++++|+.|||+||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 34699999999999999999999999 99999999999999999999
Q ss_pred eeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhc
Q 006178 505 KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLE 583 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 583 (658)
||+|||+|+...............+++.|||||++.+..|+.++|||||||++|||+| |+.||...... +.......
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~ 245 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQ 245 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence 9999999987654332222222335678999999999999999999999999999999 89999764322 22111111
Q ss_pred CCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 584 LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
......|..+++++.+|+.+||+.||++||||+||++.|+++.+.
T Consensus 246 ----------~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 246 ----------GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 111123344567789999999999999999999999999987653
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-56 Score=455.14 Aligned_cols=257 Identities=18% Similarity=0.264 Sum_probs=202.1
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.++||+|+||+||+|+++ ++..||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~ 118 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--PL 118 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SE
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EE
Confidence 4588999999999999875 4678999998432 2344578999999999999999999999999877 67
Q ss_pred EEEEEecCCCChhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGE-------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 502 (658)
+||||||++|+|.++++... ..+++|.++++|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 99999999999999997532 23699999999999999999999999 999999999999999999
Q ss_pred CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHh
Q 006178 503 SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 503 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 581 (658)
.+||+|||+|+.+.............+++.|||||++.+..|+.++|||||||++|||+| |+.||...... +.....
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i 273 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCI 273 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 999999999987654333333333445678999999999999999999999999999999 89999754321 111111
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
... .....+..+++++.+|+.+||+.||++||||.||++.|+.+.+.+
T Consensus 274 ~~g----------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 274 TQG----------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHT----------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HcC----------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 111 111233345577899999999999999999999999999987654
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-55 Score=443.68 Aligned_cols=260 Identities=23% Similarity=0.341 Sum_probs=203.4
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
|.+.||+|+||+||+|++++ .||||.+.... ......+.|.+|++++++++|||||+++|++.++ ..+|||||
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVmEy 112 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQW 112 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEEEc
Confidence 56899999999999999764 58999875332 2234457899999999999999999999998653 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.++++.... .++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+........
T Consensus 113 ~~gGsL~~~l~~~~~-~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 999999999975433 599999999999999999999999 9999999999999999999999999999876433322
Q ss_pred CCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.......+++.|||||++.+ +.|+.++|||||||++|||+||+.||........ +...... ....|....
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~--~~~~~~~-----~~~~p~~~~ 261 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ--IIFMVGR-----GYASPDLSK 261 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHHHHHT-----TCCCCCSTT
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH--HHHHHhc-----CCCCCCccc
Confidence 22333456788999999864 4699999999999999999999999975433211 1111111 112233333
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.+..++..+.+|+.+||+.||++||||.||++.|+.+....
T Consensus 262 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 44556678899999999999999999999999998876543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-53 Score=438.97 Aligned_cols=250 Identities=17% Similarity=0.199 Sum_probs=199.2
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||+||+|++. +|+.||||++..... .....+.+.+|+++|++++|||||++++++.+.+ ..||||
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVm 102 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVM 102 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEE
Confidence 34488999999999999986 688999999865432 2334568999999999999999999999999887 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||++|+|.+++...+...+++.+++.|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.+....
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999866655689999999999999999999999 99999999999999999999999999998754321
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....+++.|||||++.+..|+.++|||||||++|||+||+.||.... ..+........ .....
T Consensus 180 ~~--~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~----------~~~~~ 245 (350)
T 4b9d_A 180 EL--ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--MKNLVLKIISG----------SFPPV 245 (350)
T ss_dssp HH--HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHT----------CCCCC
T ss_pred cc--ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcC----------CCCCC
Confidence 11 112346778999999999999999999999999999999999997543 22222222211 11112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+.++.+|+.+||+.||++|||++|+++.
T Consensus 246 ~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23344678899999999999999999999863
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-53 Score=440.16 Aligned_cols=261 Identities=20% Similarity=0.247 Sum_probs=206.3
Q ss_pred hhhcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~ 432 (658)
..+.+.||+|+||+||+|++.+ ++.||||++.... .....+.|.+|+++|.+++| ||||+++|+|.+.+.
T Consensus 66 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred eEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 3445899999999999999753 2468888874322 22345679999999999955 999999999976532
Q ss_pred CceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
..+||||||++|+|.++|+... +..+++.++..|+.|||+||+|||++ +||||||||+|||+
T Consensus 143 -~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl 218 (353)
T 4ase_A 143 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 218 (353)
T ss_dssp -CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred -EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceee
Confidence 4699999999999999997532 23589999999999999999999999 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc--HH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN--LV 575 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~--~~ 575 (658)
++++.+||+|||+|+.+.............+++.|||||++.+..|+.++|||||||++|||+| |+.||.+.... +.
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~ 298 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 298 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999999987643332222222345677999999999999999999999999999998 99999764432 11
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
..+.... ....+..+++++.+++.+||+.||++|||+.||+++|+++++...
T Consensus 299 ~~i~~g~-------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 299 RRLKEGT-------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp HHHHHTC-------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHcCC-------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 1111110 112233345678899999999999999999999999999876443
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=414.30 Aligned_cols=249 Identities=21% Similarity=0.239 Sum_probs=194.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--CCCceEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~~~lv 438 (658)
|.++||+|+||+||+|++. ++..||+|++..... .....+.|.+|++++++++|||||++++++.+. +....+||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 4578999999999999986 577899998864432 233456799999999999999999999998652 11257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchhhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWKTILA 517 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~ 517 (658)
||||++|+|.+++++.. .+++..+..|+.||+.||+|||++ +++||||||||+|||++. ++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999998654 599999999999999999999998 123999999999999984 78999999999975321
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.......+++.|||||++.+ .|+.++|||||||++|||+||+.||..... ............ ....
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~~~~~i~~~~--~~~~------ 250 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRVTSGV--KPAS------ 250 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHHTTTC--CCGG------
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHHHHHHHHcCC--CCCC------
Confidence 12233456788999998864 699999999999999999999999965432 222222221110 0000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+...++++.+|+.+||+.||++|||++|+++
T Consensus 251 -~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 -FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11112346789999999999999999999976
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-52 Score=428.83 Aligned_cols=248 Identities=16% Similarity=0.170 Sum_probs=199.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.++||+|+||.||+|++. +|+.||||++..... ..+|+.++++++|||||++++++.+.+ ..||||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy 131 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFMEL 131 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEec
Confidence 478999999999999986 578999999853221 246999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-CceeccccchhhhhhcCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILARSE 520 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~ 520 (658)
|++|+|.++++..+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+.....
T Consensus 132 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999999998654 499999999999999999999999 999999999999999987 699999999987643321
Q ss_pred CC---CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcC
Q 006178 521 KN---PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 521 ~~---~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. ......+++.|||||++.+..|+.++|||||||++|||+||+.||..... .+...+.. .+. ..
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~---~~~--------~~ 275 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS---EPP--------PI 275 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH---SCC--------GG
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc---CCC--------Cc
Confidence 11 11223467889999999999999999999999999999999999975432 22211111 111 11
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...++..+..+.+++.+||+.||++|||+.|+++.|.....
T Consensus 276 ~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 12233445678899999999999999999999999887653
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-52 Score=425.58 Aligned_cols=245 Identities=16% Similarity=0.242 Sum_probs=199.9
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|++. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+.+ ..||||||
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy 152 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 152 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeC
Confidence 478999999999999986 6889999998644322 2345789999999999999999999999888 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.+++... .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+......
T Consensus 153 ~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 153 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred CCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 9999999999753 499999999999999999999999 9999999999999999999999999999876433222
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....+++.|||||++.+..|+.++|||||||++|||+||+.||..... .+........ ..+.. ....
T Consensus 227 --~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~-------~~~~~-~~~~ 294 (346)
T 4fih_A 227 --RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDN-------LPPRL-KNLH 294 (346)
T ss_dssp --BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHS-------SCCCC-SCGG
T ss_pred --ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcC-------CCCCC-Cccc
Confidence 2233467889999999999999999999999999999999999975432 1111111111 01111 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..++++.+|+.+||+.||++|||+.|+++.
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 344678899999999999999999999874
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-52 Score=420.47 Aligned_cols=250 Identities=20% Similarity=0.217 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+++.+.||+|+||+||+|++. +++.||+|.+..... ......+.+.+|+++|++++|||||++++++.+.+ ..|+|
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yiv 110 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFG 110 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEE
Confidence 344589999999999999986 678999998854321 12233567999999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
||||++|+|.+++.+.+ .+++.++..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 111 mEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 99999999999998654 499999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
..........+++.|||||++.+..|+.++||||+||++|||+||+.||.... ..+.......... .
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~-----------~ 252 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLIFAKIIKLEY-----------D 252 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCC-----------C
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCC-----------C
Confidence 33333333456788999999999999999999999999999999999997543 2222222222111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
++...++++.+|+.+||+.||++|||++|++.
T Consensus 253 ~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 253 FPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred CCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 22233456889999999999999999998743
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-51 Score=421.96 Aligned_cols=262 Identities=18% Similarity=0.244 Sum_probs=197.5
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--CceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~~~lv~ 439 (658)
+.+.||+|+||+||+|++ +|+.||||++.... .....+.+|+..+.+++|||||+++|++.+++. ...+|||
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 357899999999999998 57899999884321 112233456666678899999999999986542 2479999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|||++|+|.++++.. .++|..+.+|+.|+++||+|||+++ .++||||||||+|||+|+++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999854 4899999999999999999999763 45899999999999999999999999999987
Q ss_pred hhhcCCC--CCCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhCCCCCCCCCC-------------c
Q 006178 515 ILARSEK--NPGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISGRPPCCKDKG-------------N 573 (658)
Q Consensus 515 ~~~~~~~--~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-------------~ 573 (658)
....... .......+++.|||||++.+. .++.++|||||||++|||+||++||..... .
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 6433221 111223467889999998764 478899999999999999999887642211 1
Q ss_pred HHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
......... ....+|.+.. .+.+.+..+.+|+.+||+.||++||||.||++.|+++.+.
T Consensus 238 ~~~~~~~~~------~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHT------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHh------cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 111111111 1112222221 1235667899999999999999999999999999987653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=426.80 Aligned_cols=245 Identities=17% Similarity=0.239 Sum_probs=199.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++. +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+.+ ..||||||
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmEy 229 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 229 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEeC
Confidence 478999999999999986 5889999998644322 2345889999999999999999999999887 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.++++.. .+++.++..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+......
T Consensus 230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 9999999999754 499999999999999999999999 9999999999999999999999999999876433222
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....+++.|||||++.+..|+.++|||||||++|||++|+.||.+.... +........ ..+.+. ...
T Consensus 304 --~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~-------~~~~~~-~~~ 371 (423)
T 4fie_A 304 --RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDN-------LPPRLK-NLH 371 (423)
T ss_dssp --BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS-------CCCCCS-CTT
T ss_pred --ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcC-------CCCCCc-ccc
Confidence 22334677899999999999999999999999999999999999754321 111111111 011111 112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.++.+|+.+||+.||++|||+.|+++.
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 234668899999999999999999999874
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=402.96 Aligned_cols=247 Identities=14% Similarity=0.169 Sum_probs=189.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||+||+|++. +++.||+|.+...... .....+.+.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv 91 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMV 91 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEE
Confidence 445589999999999999975 6889999988644322 2234567999999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+ +|+|.+++.+++ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 9999 689999998654 499999999999999999999999 9999999999999999999999999999875432
Q ss_pred CCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. ......+++.|||||++.+..+ +.++||||+||++|||+||+.||.... .............
T Consensus 166 ~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~~~~i~~~~~----------- 229 (275)
T 3hyh_A 166 N---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNISNGVY----------- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCC-----------
T ss_pred C---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCCC-----------
Confidence 2 1222346788999999998876 589999999999999999999997543 2222222222111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.++...++++.+|+.+||+.||++|||++|+++.
T Consensus 230 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1122234668899999999999999999999873
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=409.72 Aligned_cols=242 Identities=16% Similarity=0.134 Sum_probs=189.0
Q ss_pred hhhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+++.+.||+|+||+||+|+.. .++.||+|.+....... ....++.+|++++++++|||||++++++.+++ ..
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~ 101 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KL 101 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEETT--EE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EE
Confidence 344589999999999999863 36789999886443221 12235889999999999999999999999887 88
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
|+|||||++|+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 99999999999999998654 499999999999999999999999 9999999999999999999999999999865
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
...... .....+++.|||||++.+..|+.++||||+||++|||+||+.||..... .+..........
T Consensus 177 ~~~~~~--~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~~--------- 243 (304)
T 3ubd_A 177 IDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTMILKAKL--------- 243 (304)
T ss_dssp ----CC--CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC---------
T ss_pred cCCCcc--ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHHHHcCCC---------
Confidence 433222 2223467889999999999999999999999999999999999975432 222222222111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
.++...++++.+|+.+||+.||++|||+
T Consensus 244 --~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 --GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred --CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1222344668899999999999999985
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=402.01 Aligned_cols=249 Identities=15% Similarity=0.215 Sum_probs=185.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--------
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP-------- 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------- 432 (658)
+.+.||+|+||+||+|++. +++.||||++.... .....+.+.+|+++|++++|||||++++++.+.+.
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 3489999999999999976 68899999986443 23345679999999999999999999999875442
Q ss_pred --CceEEEEEecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 433 --FTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 433 --~~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
.+.|+|||||++|+|.+++..... ...++..++.|+.||++||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 136899999999999999986543 3456778899999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhcCCCCC----------CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH
Q 006178 510 DSWKTILARSEKNP----------GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 510 Gla~~~~~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~ 579 (658)
|+|+.+........ .....+++.|||||++.+..|+.++|||||||++|||++ ||....... ....
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~-~~~~ 238 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV-RTLT 238 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-HHHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH-HHHH
Confidence 99987654322111 112346788999999999999999999999999999996 775321111 1111
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.. .............+...+|+.+||+.||++|||+.|+++
T Consensus 239 ~~----------~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DV----------RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH----------HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH----------hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 111111112233455778999999999999999999987
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-47 Score=398.77 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=196.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~ 435 (658)
.+.+.||+|+||+||+|++. +|+.||||++..... .....+.+.+|+++|++++|||||++++++.... ....
T Consensus 57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 34589999999999999986 688999999853322 2334567889999999999999999999986432 1268
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
|||||||+ |+|.+++...+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+
T Consensus 135 ~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99999995 68999997654 599999999999999999999999 9999999999999999999999999999876
Q ss_pred hhcCC--CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-ccccc
Q 006178 516 LARSE--KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EVMSY 590 (658)
Q Consensus 516 ~~~~~--~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~~~ 590 (658)
..... ........++..|||||++.+. .++.++||||+||++|||+||++||.+.... ....+......+ .....
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 43221 1122234567889999998875 5699999999999999999999999765421 111111111111 00000
Q ss_pred cc-----------CCcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 VV-----------DPELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ~~-----------~~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. -+.....+ +..+.++.+|+.+||+.||++|||+.|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 00000111 1224568899999999999999999999875
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=388.74 Aligned_cols=255 Identities=16% Similarity=0.178 Sum_probs=190.8
Q ss_pred hhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||+||+|+++ .++.||+|++.... ...++.+|+++|+++ +|||||++++++.+.+ +.
T Consensus 24 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--~~ 95 (361)
T 4f9c_A 24 KIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--HV 95 (361)
T ss_dssp EEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--EE
T ss_pred EEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--EE
Confidence 34589999999999999864 35789999874332 234678999999998 7999999999999887 88
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKT 514 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~ 514 (658)
|+||||+++|+|.++++ .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 99999999999999984 489999999999999999999999 99999999999999977 7999999999975
Q ss_pred hhhcCCC--------------------------CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCC
Q 006178 515 ILARSEK--------------------------NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 515 ~~~~~~~--------------------------~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
....... .......+++.|+|||++.+. .|+.++||||+||++|||+||+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 4321100 001122467789999999875 5899999999999999999999999
Q ss_pred CCCCCcHHHHHHHh--hc----------CCcc-----------ccc---------ccCCcCC----------CCCHHHHH
Q 006178 568 CKDKGNLVDWAKDY--LE----------LPEV-----------MSY---------VVDPELK----------HFSYDDLK 605 (658)
Q Consensus 568 ~~~~~~~~~~~~~~--~~----------~~~~-----------~~~---------~~~~~~~----------~~~~~~~~ 605 (658)
.....+........ .. .... ... ...+... ......++
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 75544322211100 00 0000 000 0000000 00112345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 606 VICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 606 ~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
++.+|+.+||+.||++|||++|++++
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 68899999999999999999998863
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=371.21 Aligned_cols=284 Identities=25% Similarity=0.428 Sum_probs=230.9
Q ss_pred cccccHHHHHHHHhhhc--------ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC
Q 006178 347 VVRFSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418 (658)
Q Consensus 347 ~~~~~~~~l~~~~~~f~--------~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ 418 (658)
...|++.++..++.+|. +.||+|+||.||+|+. +++.+|+|++............+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 45799999999999997 4699999999999997 56889999986544333344567899999999999999
Q ss_pred CccceeeEEecCCCCceEEEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 419 nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
||+++++++.+.+ ..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999998877 6799999999999999987432 34699999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLV 575 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~ 575 (658)
+++++.+||+|||+++...............++..|+|||.+.+ .++.++||||||+++|||+||+.||..... ...
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 99999999999999876533222111222335677999998764 589999999999999999999999975432 223
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+..........+...+++.+...+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 33333333334445556666666788889999999999999999999999999999998754
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=403.96 Aligned_cols=246 Identities=15% Similarity=0.133 Sum_probs=193.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc--cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.++||+|+||+||+|++. +|+.||+|++...... ..........+++.+++.++|||||++++++.+.+ ..|+||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~lylVm 271 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFIL 271 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--EEEEEE
Confidence 389999999999999986 5789999988644311 11111122334567777889999999999999988 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||+||+|.++|.+.+ .+++..+..|+.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+.+....
T Consensus 272 Ey~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 272 DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 9999999999998654 499999999999999999999999 99999999999999999999999999998754221
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.....+++.|||||++.. ..|+.++||||+||++|||+||+.||..... +.............
T Consensus 347 ----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~----------- 411 (689)
T 3v5w_A 347 ----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV----------- 411 (689)
T ss_dssp ----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-----------
T ss_pred ----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-----------
Confidence 223356788999999975 5799999999999999999999999975332 22222222222111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPS-----MQELCT 630 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~ 630 (658)
.++...+.++.+|+.+||+.||++|++ ++||.+
T Consensus 412 ~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 122234466889999999999999998 677764
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=378.89 Aligned_cols=273 Identities=27% Similarity=0.462 Sum_probs=220.3
Q ss_pred HHHhhhc--ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 357 VACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 357 ~~~~~f~--~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
..+.+|. +.||+|+||.||+|++++++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 109 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN--E 109 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--C
T ss_pred HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--e
Confidence 3344443 7899999999999999889999999875432 223567899999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 435 RMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
.++||||+++|+|.+++.... ...+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 799999999999999997543 23589999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC----CcHHHHHHHhhcCCccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK----GNLVDWAKDYLELPEVM 588 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~----~~~~~~~~~~~~~~~~~ 588 (658)
+...............++..|+|||.+.+..++.++|||||||++|||+||+.||.... .....|....... ...
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 265 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQL 265 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-TCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-ccH
Confidence 76432222222222334667999999999999999999999999999999999996432 2344444333222 233
Q ss_pred ccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 589 SYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 589 ~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
....++... ..+...+..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 444454443 456788899999999999999999999999999999887543
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=376.05 Aligned_cols=283 Identities=31% Similarity=0.521 Sum_probs=230.1
Q ss_pred ccccccHHHHHHHHhhhc--ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccce
Q 006178 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (658)
Q Consensus 346 ~~~~~~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 423 (658)
....|++.++...+.+|. +.||+|+||.||+|+..+++.||+|++...... .....+.+|++++++++||||+++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccce
Confidence 456789999999988886 899999999999999888999999998543321 112358899999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 501 (658)
++++.+.+ ..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++.++|+||||||+|||++++
T Consensus 93 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 93 RGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred EEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99998877 6799999999999999998653 2359999999999999999999999877899999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCC------CCCCcHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC------KDKGNLV 575 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~------~~~~~~~ 575 (658)
+.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||+||+.||. .......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp CCEEECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCEEeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 99999999999765322211 1112235677999999998899999999999999999999999995 2233455
Q ss_pred HHHHHhhcCCcccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 576 DWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.|....... .......+.... ..+...+..+.+++.+||+.||++|||+.||+++|++.
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 555444333 233344444433 45778889999999999999999999999999999874
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=399.74 Aligned_cols=250 Identities=14% Similarity=0.208 Sum_probs=200.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|+++ +|+.||+|++.... ....+.+.+|+++|++++|||||++++++.+.+ ..|||
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~iv 232 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMI 232 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEEE
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEE
Confidence 344589999999999999986 68899999885433 223467889999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC--CCceeccccchhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKLVDFDSWKTIL 516 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla~~~~ 516 (658)
||||++|+|.+++..... .+++.++..|+.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 233 ~E~~~gg~L~~~i~~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EECCCCCBHHHHHTCTTS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EeecCCCcHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 999999999999975432 599999999999999999999999 99999999999999854 789999999998764
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... ......+++.|||||++.+..|+.++||||+||++|||++|+.||.+... .+............. .+..
T Consensus 309 ~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~~~i~~~~~~~~---~~~~ 380 (573)
T 3uto_A 309 PKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKSCDWNMD---DSAF 380 (573)
T ss_dssp TTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCCCCC---SGGG
T ss_pred CCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHhCCCCCC---cccc
Confidence 221 11223456789999999999999999999999999999999999975432 222222221111111 1111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+|+.+||+.||++|||+.|++++
T Consensus 381 ----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 ----SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1233567899999999999999999999874
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=378.78 Aligned_cols=255 Identities=22% Similarity=0.257 Sum_probs=205.8
Q ss_pred hcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
+.+.||+|+||.||+|++. ++..||+|.+... ......+.+.+|+++++++ +||||+++++++.+.+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~- 160 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG- 160 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT---CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS-
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC---cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC-
Confidence 4589999999999999863 3446888887432 1233456799999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
..++||||+++|+|.+++.... ...+++.++..++.||++||+|||++ +|+||||||+|||+
T Consensus 161 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 161 -PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp -SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred -CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 6799999999999999997543 13589999999999999999999999 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH-HH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL-VD 576 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~-~~ 576 (658)
+.++.+||+|||+++.+...........+.++..|+|||++.+..++.++|||||||++|||+| |+.||....... ..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999999986644333233333445567999999999999999999999999999999 999997544321 11
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.... ......+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 317 ~~~~-------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 317 LLKE-------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHT-------------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhc-------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111 01112233445678899999999999999999999999998865
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=363.19 Aligned_cols=259 Identities=21% Similarity=0.299 Sum_probs=198.3
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+. +++.||+|.+..... .....+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 115 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEY 115 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEEC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEec
Confidence 348999999999999987 567899998854432 2334567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++..... ..+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 999999999986432 2489999999999999999999998 8 999999999999999999999999998764332
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
... .....++..|+|||.+.+..++.++|||||||++|||+||+.||........ ....... .....
T Consensus 193 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~~~---------~~~~~ 259 (309)
T 3p86_A 193 FLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVGFK---------CKRLE 259 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHHS---------CCCCC
T ss_pred ccc--cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhc---------CCCCC
Confidence 211 1223346679999999999999999999999999999999999975432211 1111000 00011
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
.+...+..+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 260 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 2233446688999999999999999999999999998876443
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=368.27 Aligned_cols=262 Identities=19% Similarity=0.298 Sum_probs=205.1
Q ss_pred hhhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.+.||+|+||.||+|++. .+..||+|++.... .....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 125 (325)
T 3kul_A 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LA 125 (325)
T ss_dssp EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CC
T ss_pred eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--cc
Confidence 334589999999999999985 33459999885322 2334567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.++++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEeeCCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 999999999999999975433 599999999999999999999999 9999999999999999999999999999875
Q ss_pred hhcCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
........ ...+.++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .........
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~--------- 270 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEG--------- 270 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTT---------
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcC---------
Confidence 43322111 112233456999999999999999999999999999999 99999654322 111111111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchh
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISV 642 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 642 (658)
.....+...+..+.+++.+||+.||++|||+.||++.|+.+.....+.
T Consensus 271 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 271 -YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred -CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 001122234467889999999999999999999999999998765543
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=356.00 Aligned_cols=253 Identities=19% Similarity=0.260 Sum_probs=203.8
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 86 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEF 86 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEEC
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEe
Confidence 4589999999999999998888999998853322 2356899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 87 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHHhcCc-ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 999999999975433 589999999999999999999999 9999999999999999999999999999765322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... ......... .....+
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~----------~~~~~~ 229 (269)
T 4hcu_A 163 -SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTG----------FRLYKP 229 (269)
T ss_dssp -STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT----------CCCCCC
T ss_pred -cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcC----------ccCCCC
Confidence 1111223456999999999999999999999999999999 99999754322 221111111 000112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22346688999999999999999999999999988754
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=377.99 Aligned_cols=255 Identities=19% Similarity=0.272 Sum_probs=202.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+.... .....+.|.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 192 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVME 192 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEE
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEE
Confidence 4589999999999999987 67889999874321 2233456889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.++++..+ ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999997543 2589999999999999999999999 999999999999999999999999999875432211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.........+..|+|||.+.+..++.++|||||||++|||+| |+.||........ ........ ....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~---~~~~~~~~---------~~~~ 336 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT---REFVEKGG---------RLPC 336 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH---HHHHHTTC---------CCCC
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCC---------CCCC
Confidence 111111122456999999999999999999999999999999 9999975442211 11111111 0112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+..++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 337 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 23345678899999999999999999999999998754
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=371.94 Aligned_cols=260 Identities=18% Similarity=0.219 Sum_probs=207.0
Q ss_pred hhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 361 DFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
.+.+.||+|+||.||+|++. ++..||||++... .......++.+|+.++++++||||+++++++.+.. .
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~ 148 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--P 148 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc---cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--C
Confidence 34589999999999999953 3567999987422 12334557899999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Ccee
Q 006178 435 RMLVFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKL 506 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl 506 (658)
.++||||+++|+|.+++.... ...+++.+++.++.||++||+|||++ +|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 699999999999999997532 23589999999999999999999999 999999999999999554 5999
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCC
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 585 (658)
+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||+| |+.||...... .........
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~- 302 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSG- 302 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTT-
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-
Confidence 99999987755444444444445677999999999999999999999999999998 99999754422 111111111
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
. ....+...+..+.+++.+||+.||++|||+.||++.|+.+.....
T Consensus 303 ~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 303 G---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred C---------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 0 111122334668899999999999999999999999998876543
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=363.19 Aligned_cols=268 Identities=19% Similarity=0.266 Sum_probs=202.0
Q ss_pred hhhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...+...
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 34458999999999999984 25788999987432 2334567899999999999999999999986543225
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred eEEEEEeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 7999999999999999976533 599999999999999999999999 999999999999999999999999999987
Q ss_pred hhhcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCC-------c
Q 006178 515 ILARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP-------E 586 (658)
Q Consensus 515 ~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~-------~ 586 (658)
........ ......++..|+|||.+.+..++.++||||||+++|||+||..|+.......... ..... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM---IGNDKQGQMIVFH 240 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHH---HCTTCCTHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhh---hcCccccchhHHH
Confidence 64332211 1222334456999999999999999999999999999999999985422111110 00000 0
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.............+...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0000111111223344557789999999999999999999999999988754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=354.54 Aligned_cols=246 Identities=18% Similarity=0.248 Sum_probs=198.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 97 (297)
T 3fxz_A 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVME 97 (297)
T ss_dssp CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEEE
Confidence 3478999999999999974 6788999988544322 2456889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (297)
T ss_dssp CCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence 99999999999754 489999999999999999999999 999999999999999999999999999876543222
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++|||||||++|||+||+.||.................+ . ...+
T Consensus 172 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~---------~-~~~~ 239 (297)
T 3fxz_A 172 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP---------E-LQNP 239 (297)
T ss_dssp --CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC---------C-CSCG
T ss_pred --ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------C-CCCc
Confidence 122234567799999999999999999999999999999999999754422111111111000 0 0112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2344668899999999999999999999874
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-43 Score=359.99 Aligned_cols=256 Identities=20% Similarity=0.256 Sum_probs=200.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.+|+|++... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 87 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITE 87 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEEE
Confidence 3489999999999999986 5778888877332 2344568999999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++..... .+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CCTTCBHHHHHHHCCT-TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999999986433 599999999999999999999999 999999999999999999999999999976543222
Q ss_pred CCC------------CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 521 KNP------------GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 521 ~~~------------~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
... .....++..|+|||.+.+..++.++||||||+++|||++|..|+.......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------~~~~ 236 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------GLNV 236 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------SBCH
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------hhhh
Confidence 111 012335667999999999999999999999999999999999986432110000 0000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
....+. ..+...+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 237 ~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 237 RGFLDR---YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HHHHHH---TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccccc---cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000000 0112233457899999999999999999999999998764
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=362.22 Aligned_cols=261 Identities=21% Similarity=0.291 Sum_probs=201.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--CceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~~~lv~ 439 (658)
+.+.||+|+||.||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.+... ...++||
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 4489999999999999986 6889999884322 223456679999999999999999999987542 2469999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------CCCeeeccCCCcceeecCCCCceeccccch
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------GPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
||+++|+|.++++.. .+++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 102 e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred ecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999999754 4899999999999999999999852 348999999999999999999999999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCC--------------c
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--------------N 573 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--------------~ 573 (658)
+.+.............++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 87654333322333445778999999886 3566789999999999999999999965322 1
Q ss_pred HHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...+...... ....+.... .....+..+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 259 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVVH------KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHTT------SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhc------ccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111110 011111111 123456779999999999999999999999999998764
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=371.74 Aligned_cols=258 Identities=21% Similarity=0.314 Sum_probs=195.1
Q ss_pred hhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++. ++..||+|++.... .....++|.+|++++++++||||+++++++.+.+ ..+
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~ 122 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVM 122 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCE
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceE
Confidence 34589999999999999975 46779999874322 2334567999999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.++++... ..+++.++..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999998543 3599999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCCCC-cccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPG-TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
........ ..+..+..|+|||.+.+..++.++|||||||++|||++ |+.||...... ......... .
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~~-~-------- 267 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEG-Y-------- 267 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHTT-E--------
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-C--------
Confidence 33221111 12223456999999999999999999999999999998 99999654322 111111110 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
....+...+..+.+++.+||+.||++||++.||++.|+++....
T Consensus 268 -~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00112234467889999999999999999999999999987543
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=366.31 Aligned_cols=258 Identities=22% Similarity=0.303 Sum_probs=205.2
Q ss_pred hcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++.+ ++.||+|.+.... .....+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 125 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PM 125 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--ce
Confidence 34899999999999999853 3678888874322 2334567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp 493 (658)
++||||+++|+|.+++.... ...+++.+++.++.||++||+|||++ +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 99999999999999997532 14699999999999999999999999 999999999
Q ss_pred cceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC
Q 006178 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572 (658)
Q Consensus 494 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~ 572 (658)
+||++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999987654332222223334567999999999999999999999999999999 9999975432
Q ss_pred cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
. +....... ......+...+..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 283 ~--~~~~~~~~----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 E--EVIYYVRD----------GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp H--HHHHHHHT----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred H--HHHHHHhC----------CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 2 11111111 1111223334567889999999999999999999999999987654
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=355.55 Aligned_cols=254 Identities=19% Similarity=0.257 Sum_probs=203.0
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|+..++..||+|.+..... ..+++.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 83 (268)
T 3sxs_A 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVTE 83 (268)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEE
T ss_pred eeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEEE
Confidence 34589999999999999999888999998854332 2356899999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 84 YISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999999975432 599999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ......... ....
T Consensus 160 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~----------~~~~ 226 (268)
T 3sxs_A 160 V-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVLKVSQGH----------RLYR 226 (268)
T ss_dssp E-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTC----------CCCC
T ss_pred h-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HHHHHHcCC----------CCCC
Confidence 1 1111122346999999999899999999999999999999 999996543221 111111110 0011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+...+..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 122235688999999999999999999999999998764
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=355.41 Aligned_cols=260 Identities=19% Similarity=0.258 Sum_probs=207.5
Q ss_pred ccccHHHHHHHHhh----------h--cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh
Q 006178 348 VRFSRQELEVACED----------F--SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR 414 (658)
Q Consensus 348 ~~~~~~~l~~~~~~----------f--~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~ 414 (658)
..|++++++.++.. | .+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHh
Confidence 46888888888864 2 268999999999999987 688999998854332 234568899999999
Q ss_pred ccCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 415 INHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 415 l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
++||||+++++++...+ ..++||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+
T Consensus 99 l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~ 170 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSD 170 (321)
T ss_dssp CCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred CCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHH
Confidence 99999999999999877 789999999999999998743 489999999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~ 574 (658)
||+++.++.+||+|||+++........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-- 246 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-- 246 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--
T ss_pred HEEECCCCcEEEeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 999999999999999998765432211 1223456779999999999999999999999999999999999965432
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........... .+... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~-------~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 247 VQAMKRLRDSP-------PPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHHSS-------CCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHhcCC-------CCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111111110 01110 112234568899999999999999999999875
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=358.52 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=199.0
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++ .+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e 94 (328)
T 3fe3_A 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIME 94 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEE
Confidence 348999999999999998 4788999998854332 2334567889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 95 YASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999997654 499999999999999999999999 99999999999999999999999999997653221
Q ss_pred CCCCcccccCccccCCcccccCCCC-ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLD-VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~-~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||.+.+..++ .++||||+||++|||+||+.||..... ............ ..
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~-----------~~ 233 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKY-----------RI 233 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CC
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC-----------CC
Confidence 11223456779999999988775 899999999999999999999975432 222222221111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22234567899999999999999999999875
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=370.17 Aligned_cols=261 Identities=23% Similarity=0.246 Sum_probs=207.6
Q ss_pred hhcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 431 (658)
.+.+.||+|+||.||+|++. .+..||+|++.... .....+++.+|+++++++ +||||+++++++.+.+
T Consensus 72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 34589999999999999963 23468888874322 233456789999999999 9999999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
..++||||+++|+|.+++.... ...+++.+++.|+.||+.||+|||++ +|+||||||+|||
T Consensus 149 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 149 --PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred --ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 6799999999999999997543 23599999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVD 576 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~ 576 (658)
+++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~~ 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EE 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HH
Confidence 99999999999999986643332233333444567999999999999999999999999999999 9999975432 22
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
........ . ....+...+..+.+++.+||+.||++|||+.||++.|+++......
T Consensus 302 ~~~~~~~~-~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 302 LFKLLKEG-H---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp HHHHHHTT-C---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHcC-C---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 22211111 0 0111223346688999999999999999999999999998765443
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=381.99 Aligned_cols=254 Identities=14% Similarity=0.247 Sum_probs=204.5
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|.+.++..||||++.... ...+.|.+|++++++++||||+++++++.. + ..++||||
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~e~ 263 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITEF 263 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEECC
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEEee
Confidence 458999999999999999888899999985432 125679999999999999999999999863 3 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.++++......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 9999999999865444589999999999999999999999 9999999999999999999999999999875322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.......+..|+|||.+....++.++|||||||++|||+| |+.||...... +........ . ....+
T Consensus 341 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~-~---------~~~~~ 407 (454)
T 1qcf_A 341 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERG-Y---------RMPRP 407 (454)
T ss_dssp -TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHT-C---------CCCCC
T ss_pred -ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-C---------CCCCC
Confidence 1111223456999999999999999999999999999999 99999754321 111111111 0 01122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..++..+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 334567889999999999999999999999999987654
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=360.82 Aligned_cols=254 Identities=18% Similarity=0.217 Sum_probs=196.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCe----EEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. +++. ||+|.+.... .....+.+.+|+.++++++||||+++++++.+.. .+
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~ 92 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQ 92 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---EE
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---eE
Confidence 3489999999999999975 3443 4666553221 2234567999999999999999999999998754 68
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+|+||+++|+|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 99999999999999986443 599999999999999999999999 99999999999999999999999999998875
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH-HHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV-DWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 594 (658)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||........ .......
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~------------ 236 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------------ 236 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC------------
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC------------
Confidence 4433333333444567999999999999999999999999999999 9999976543222 1111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
....+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 237 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 -RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0112223446688999999999999999999999999987653
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-43 Score=362.16 Aligned_cols=267 Identities=19% Similarity=0.278 Sum_probs=193.3
Q ss_pred hhcccccCCCCeeEEEEEecCCC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--- 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--- 433 (658)
.+.+.||+|+||.||+|++..+. .||+|.+..... .....+.+.+|++++++++||||+++++++......
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 34589999999999999976543 789988754322 223356799999999999999999999999876521
Q ss_pred -ceEEEEEecCCCChhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 434 -TRMLVFDYASNGTLYEHLHYGE----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 434 -~~~lv~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEee
Confidence 2389999999999999986322 22589999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 509 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||......... .....
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~--~~~~~---- 254 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY--NYLIG---- 254 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--HHHHT----
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH--HHHhc----
Confidence 999987644332222233334567999999999999999999999999999999 99999754432111 11111
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhh
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVEL 644 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 644 (658)
......+...+..+.+++.+||+.||++|||+.|+++.|+++.........
T Consensus 255 ------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~ 305 (323)
T 3qup_A 255 ------GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305 (323)
T ss_dssp ------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred ------CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence 111112233446788999999999999999999999999999876544333
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=384.21 Aligned_cols=255 Identities=21% Similarity=0.289 Sum_probs=207.0
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++.. +..||||.+..... ..++|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 295 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIIT 295 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEEE
Confidence 345899999999999999875 77899998753321 2467999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999999876555799999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. ........+..|+|||.+....++.++|||||||++|||+| |+.||...... ....+.... ..
T Consensus 373 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------------~~ 438 (495)
T 1opk_A 373 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-------------RM 438 (495)
T ss_dssp E-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------CC
T ss_pred e-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------CC
Confidence 1 11111223456999999999999999999999999999999 99999764432 222111100 01
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..+..++..+.+|+.+||+.||++|||+.||++.|+.+....
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 123344567889999999999999999999999999987644
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=367.30 Aligned_cols=267 Identities=19% Similarity=0.220 Sum_probs=205.5
Q ss_pred HHHHHHHhhh--cccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccce
Q 006178 353 QELEVACEDF--SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKL 423 (658)
Q Consensus 353 ~~l~~~~~~f--~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l 423 (658)
.+++...++| .+.||+|+||.||+|++. +++.||||++.... .....+.+.+|++++.++ +||||+++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 3333334444 489999999999999842 45689999884322 223356799999999999 89999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCCC-----------------------------------------------
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGER----------------------------------------------- 456 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~----------------------------------------------- 456 (658)
++++.+.+. ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 92 LGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEECSTTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeecCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999987653 47999999999999999975432
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 457 -----------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 457 -----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1289999999999999999999999 99999999999999999999999999998654332
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.........++..|+|||.+.+..++.++|||||||++|||+| |+.||............. ... . ...
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~-~---------~~~ 316 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEG-T---------RMR 316 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH-HHT-C---------CCC
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH-HcC-C---------CCC
Confidence 2222222234566999999999999999999999999999999 999997654322111111 110 0 001
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+...+..+.+++.+||+.||++|||+.|++++|++++.
T Consensus 317 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 122234568899999999999999999999999998764
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=359.55 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=204.5
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++. ++..||+|.+.... .....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 101 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PL 101 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ce
Confidence 3488999999999999862 34678888874322 2334567899999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGER----------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp 493 (658)
++||||+++|+|.+++..... ..+++.++..++.||++||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999975432 2489999999999999999999999 999999999
Q ss_pred cceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC
Q 006178 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572 (658)
Q Consensus 494 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~ 572 (658)
+||++++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876543322222233344567999999999999999999999999999999 9999975443
Q ss_pred c-HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 573 N-LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 573 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
. ........ .....+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 259 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ERLFNLLKTG-------------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGHHHHHHTT-------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcC-------------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 2 22111110 0111222344678899999999999999999999999998765
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=348.17 Aligned_cols=263 Identities=18% Similarity=0.235 Sum_probs=205.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. ++..||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 91 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVME 91 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccc-cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEEe
Confidence 4589999999999999976 5788999988554322 3344567999999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 92 YIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp CCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999997654 499999999999999999999999 999999999999999999999999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. ......++..|+|||.+.+..++.++||||||+++|||+||+.||....... ......... ..... ....
T Consensus 167 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--~~~~~~~~~--~~~~~----~~~~ 237 (294)
T 4eqm_A 167 T-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS--IAIKHIQDS--VPNVT----TDVR 237 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH--HHHHHHSSC--CCCHH----HHSC
T ss_pred c-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhhcc--CCCcc----hhcc
Confidence 1 1122235677999999999999999999999999999999999997543221 111111110 00000 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhccCCCch
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-SMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 641 (658)
...+..+.+++.+||+.||++|| +++++.+.|+.+......
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 22346688999999999999998 899999999998765543
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=374.39 Aligned_cols=248 Identities=22% Similarity=0.309 Sum_probs=202.0
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|.+. ++.||||.+.... ..+.|.+|++++++++||||+++++++.+.+. ..++||||
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~ 268 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 268 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEEC
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEe
Confidence 3489999999999999986 6789999885322 24579999999999999999999999876542 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++...+...+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 9999999999876555689999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
...+..+..|+|||.+.+..++.++|||||||++|||+| |+.||...... ....+... .....
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-------------~~~~~ 407 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-------------YKMDA 407 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-------------CCCCC
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCCCC
Confidence 112234567999999999999999999999999999999 99999754322 22211110 01122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+..++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 408 p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 334457788999999999999999999999999987653
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=352.74 Aligned_cols=252 Identities=18% Similarity=0.263 Sum_probs=199.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|.+.++..||+|++..... ..+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 100 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEY 100 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECC
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEec
Confidence 4489999999999999999888999998853322 2356899999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 99999999997533 2599999999999999999999999 9999999999999999999999999999765322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .......... ....+
T Consensus 177 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~----------~~~~~ 243 (283)
T 3gen_A 177 -SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGL----------RLYRP 243 (283)
T ss_dssp -STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTC----------CCCCC
T ss_pred -cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhccc----------CCCCC
Confidence 1111223456999999999999999999999999999999 99999754322 1111111110 00111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...++.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 2223568899999999999999999999999998764
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=355.13 Aligned_cols=252 Identities=20% Similarity=0.239 Sum_probs=199.3
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.+.||+|+||.||+|+.. +|+.+|+|.+....... .....+.+.+|+.++++++||||+++++++.+.+ ..++
T Consensus 15 ~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 92 (361)
T 2yab_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVL 92 (361)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEE
Confidence 34589999999999999986 57889999886544221 1223467899999999999999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccchh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSWK 513 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~ 513 (658)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++ .+||+|||+++
T Consensus 93 v~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 93 ILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 999999999999997543 599999999999999999999999 999999999999998876 79999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
.+.... ......+++.|+|||.+.+..++.++|||||||++|||++|..||..... .................
T Consensus 168 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~~~~~-- 240 (361)
T 2yab_A 168 EIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITAVSYDFDEE-- 240 (361)
T ss_dssp ECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCCCCCHH--
T ss_pred EcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCCCCch--
Confidence 654321 11223356779999999999999999999999999999999999975432 12222211111000000
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 -----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 241 -----FFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001123568899999999999999999999863
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=356.17 Aligned_cols=250 Identities=15% Similarity=0.182 Sum_probs=196.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..+... ...+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 85 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLE 85 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEE
Confidence 3489999999999999987 6788999988544321 22356889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 999999999997554 499999999999999999999999 999999999999999999999999999976543222
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
........++..|+|||.+.+..+ +.++|||||||++|||+||+.||.........+....... ... ..
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~---------~~ 230 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-TYL---------NP 230 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC-TTS---------TT
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc-ccC---------Cc
Confidence 222223345677999999988775 7899999999999999999999976543322221111110 000 00
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11234567899999999999999999999875
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=345.74 Aligned_cols=253 Identities=21% Similarity=0.335 Sum_probs=199.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhh---HHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYL---ELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++.||+|++........... .+.+.+|++++++++||||+++++++.+.. +
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~ 97 (287)
T 4f0f_A 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP----R 97 (287)
T ss_dssp EEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----E
T ss_pred eehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----e
Confidence 34588999999999999985 678899998865443222211 167899999999999999999999987644 7
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCC-----ceeccc
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFS-----PKLVDF 509 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~-----~kl~DF 509 (658)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +||+||
T Consensus 98 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEECCTTCBHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred EEEEecCCCCHHHHHhcccC-CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 99999999999998875443 699999999999999999999998 8 999999999999988776 999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccc--cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLE--ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
|+++..... .....++..|+|||.+. ...++.++|||||||++|||++|+.||...................
T Consensus 174 g~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~- 247 (287)
T 4f0f_A 174 GLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL- 247 (287)
T ss_dssp TTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC-
T ss_pred Ccccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC-
Confidence 998743221 12233456799999984 4567899999999999999999999997655443333222221110
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
. ...+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 248 -----~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 -----R---PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----C---CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 112233446788999999999999999999999999864
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=346.90 Aligned_cols=253 Identities=22% Similarity=0.300 Sum_probs=190.3
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++. ++.+|+|.+............+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 11 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 87 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVMEF 87 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEEC
T ss_pred eeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEEc
Confidence 4589999999999999985 78899998765443322334567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--------CCCceeccccchh
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------DFSPKLVDFDSWK 513 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------~~~~kl~DFGla~ 513 (658)
+++++|.+++... .+++..+..++.|+++||+|||++...+|+||||||+||+++. ++.+||+|||+++
T Consensus 88 ~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 88 ARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp CTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 9999999998643 5899999999999999999999992122999999999999986 6789999999997
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... ....++..|+|||.+.+..++.++||||||+++|||+||+.||.........+.... . .
T Consensus 165 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~-~------- 230 (271)
T 3dtc_A 165 EWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM--N-K------- 230 (271)
T ss_dssp ---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT--S-C-------
T ss_pred ccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc--C-C-------
Confidence 6543221 122346679999999999999999999999999999999999975443222211111 1 0
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 231 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 -LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00112233446788999999999999999999999999864
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=376.69 Aligned_cols=254 Identities=17% Similarity=0.250 Sum_probs=200.8
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.++..||||++..... ..+.|.+|++++++++||||+++++++.+ + ..++||||
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e~ 259 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEY 259 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECC
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEehh
Confidence 4588999999999999999888899998753321 24579999999999999999999999876 4 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY- 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce-
Confidence 9999999999754434589999999999999999999999 999999999999999999999999999987543211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
........+..|+|||.+.+..++.++|||||||++|||+| |+.||...... +........ .....+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~----------~~~~~~ 403 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERG----------YRMPCP 403 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT----------CCCCCC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC----------CCCCCC
Confidence 11111223456999999999999999999999999999999 99999754321 111111111 011123
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..++..+.+++.+||+.||++|||++++++.|+.+....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 344567889999999999999999999999999987644
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=366.71 Aligned_cols=268 Identities=13% Similarity=0.107 Sum_probs=198.9
Q ss_pred hcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccc-------hhhHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
+.+.||+|+||.||+|.+.. ++.||+|.+........ ......+..|+..++.++||||+++++++.
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 118 (364)
T 3op5_A 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118 (364)
T ss_dssp EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence 45899999999999999865 36889998754321100 011123445666777888999999999987
Q ss_pred cCCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec--CCCCc
Q 006178 429 ESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSP 504 (658)
Q Consensus 429 ~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ 504 (658)
.... ...++||||+ +++|.+++.... ..+++.+++.|+.||+.||+|||++ +|+||||||+|||++ .++.+
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~~ 193 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV 193 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTCE
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCeE
Confidence 6421 2579999999 999999997643 3599999999999999999999999 999999999999999 88999
Q ss_pred eeccccchhhhhhcCCCCC-----CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHH
Q 006178 505 KLVDFDSWKTILARSEKNP-----GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDW 577 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~ 577 (658)
||+|||+++.+........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ....
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~ 273 (364)
T 3op5_A 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273 (364)
T ss_dssp EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHH
T ss_pred EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHH
Confidence 9999999987653322111 12223567899999999999999999999999999999999999743222 2211
Q ss_pred HHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...... .......++.+. ....+.++.+++..||+.||++||++.+|++.|+++...
T Consensus 274 ~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 274 SKIRYR--ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHH--HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhh--hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 111111 111222222111 012245688999999999999999999999999987753
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=364.68 Aligned_cols=259 Identities=23% Similarity=0.328 Sum_probs=193.4
Q ss_pred hcccccCCCCeeEEEEEecC--C--CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++.+ + ..+|+|.+... ......++|.+|+.++++++||||+++++++.+.+. ..++
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~l 168 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 168 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEE
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEE
Confidence 45789999999999999742 2 25677766422 223345679999999999999999999999765432 5689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++..... .+++.++..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 169 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 9999999999999975433 589999999999999999999999 999999999999999999999999999986543
Q ss_pred cCCCC--CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC-cHHHHHHHhhcCCcccccccC
Q 006178 518 RSEKN--PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG-NLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 593 (658)
..... ......++..|+|||.+.+..++.++|||||||++|||+| |.+||..... .........
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~------------ 312 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------------ 312 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT------------
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC------------
Confidence 22111 1112223456999999999999999999999999999999 6778764432 222221111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 313 -~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 313 -RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 00111223446788999999999999999999999999998876544
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=348.79 Aligned_cols=253 Identities=18% Similarity=0.214 Sum_probs=199.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||.||+|+.. ++..+|+|.+....... .....+.+.+|+.++++++||||+++++++.+.. ..+
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~ 90 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVI 90 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 445689999999999999986 57889999886544221 1223567999999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccch
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSW 512 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla 512 (658)
+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||++++++ .+||+|||++
T Consensus 91 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999997543 599999999999999999999999 999999999999999887 7999999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
+....... .....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ................
T Consensus 166 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~- 239 (326)
T 2y0a_A 166 HKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANVSAVNYEFEDE- 239 (326)
T ss_dssp EECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHTCCCCCHH-
T ss_pred eECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHHhcCCCcCcc-
Confidence 86532221 12233567799999999999999999999999999999999999654321 1111111110000000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 240 ------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ------HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001123568899999999999999999999874
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=353.53 Aligned_cols=272 Identities=13% Similarity=0.134 Sum_probs=208.8
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|++ .+++.||+|.+..... .+.+.+|+.+++++ +|+|++++++++.+.. ..++||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~ 85 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVI 85 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEEE
Confidence 448899999999999997 4678899998743322 23478899999999 8999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC-----ceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~ 514 (658)
||+ +++|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 8999999986533 599999999999999999999999 9999999999999987776 99999999987
Q ss_pred hhhcCCC-----CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCccc
Q 006178 515 ILARSEK-----NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPEVM 588 (658)
Q Consensus 515 ~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~ 588 (658)
....... .......++..|+|||.+.+..++.++|||||||++|||+||+.||...... .............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-- 238 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-- 238 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH--
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc--
Confidence 6433221 1122234567799999999999999999999999999999999999764321 1111111110000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
...........+..+.+++.+||+.||++|||+++|++.|+++...... ....+.+|.+|
T Consensus 239 ----~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~--~~~~~~dw~~l 298 (298)
T 1csn_A 239 ----STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT--TEDENFDWNLL 298 (298)
T ss_dssp ----HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC--CSCSCCGGGCC
T ss_pred ----CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC--CCCCccccCCC
Confidence 0000000112346788999999999999999999999999998764322 23467888764
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-42 Score=358.11 Aligned_cols=262 Identities=21% Similarity=0.296 Sum_probs=201.2
Q ss_pred hhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||.||+|++. ++..||+|.+..... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-- 122 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLLGACTLSG-- 122 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC---HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--
Confidence 34589999999999999962 345799998854321 22346789999999999 9999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCC
Q 006178 434 TRMLVFDYASNGTLYEHLHYGER---------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlk 492 (658)
..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 67999999999999999975432 2389999999999999999999999 99999999
Q ss_pred CcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCC
Q 006178 493 SSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDK 571 (658)
Q Consensus 493 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~ 571 (658)
|+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987643322211112223456999999999999999999999999999998 999997654
Q ss_pred CcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 572 GNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
...... ....... . ...+...+..+.+++.+||+.||.+|||+.|+++.|+.+.....+
T Consensus 280 ~~~~~~--~~~~~~~------~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 280 VDANFY--KLIQNGF------K---MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CSHHHH--HHHHTTC------C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred cHHHHH--HHHhcCC------C---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 322111 1111100 0 011223346788999999999999999999999999998775443
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-42 Score=348.11 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=193.1
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.+.||+|+||.||+|++.+ .+|+|++..... .....+.+.+|++++++++||||+++++++... ..++||
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~ 98 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVT 98 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEEE
Confidence 3345899999999999998754 589988754432 234456799999999999999999999976543 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccc
Confidence 9999999999997543 3599999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.........++..|+|||.+. +..++.++||||||+++|||+||+.||....... ......... ...+..
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~------~~~~~~ 247 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRG------SLSPDL 247 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHT------SCCCCT
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhccc------ccCcch
Confidence 222222234567799999986 5678999999999999999999999997543321 111111110 011122
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.......+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22233445678899999999999999999999999998764
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-41 Score=347.44 Aligned_cols=266 Identities=16% Similarity=0.196 Sum_probs=205.9
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++.. ++.||+|++..... ....+.+.+|++++++++||||+++++++........++|||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 45899999999999999874 78899998753322 122456789999999999999999999998766556799999
Q ss_pred ecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccccchhhh
Q 006178 441 YASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~ 515 (658)
|+++|+|.+++..... ..+++.++..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 9999999999985432 2499999999999999999999999 99999999999999 77888999999999765
Q ss_pred hhcCCCCCCcccccCccccCCcccc--------cCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhc-C
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLE--------ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLE-L 584 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~--------~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~-~ 584 (658)
..... .....++..|+|||.+. +..++.++|||||||++|||+||+.||..... ........... .
T Consensus 167 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 167 EDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred CCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 43221 12223567799999986 57899999999999999999999999964321 11222222111 1
Q ss_pred C-ccccccc---------C---CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 585 P-EVMSYVV---------D---PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 585 ~-~~~~~~~---------~---~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
+ ....... . +............+.+++.+||+.||++|||++|+++...+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1 1111000 0 1112346778889999999999999999999999999988654
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=350.23 Aligned_cols=259 Identities=17% Similarity=0.167 Sum_probs=195.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 100 (311)
T 3niz_A 25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFEF 100 (311)
T ss_dssp EEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEEC
T ss_pred hhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEcC
Confidence 3488999999999999998899999999854432 2233467889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
++ |+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 101 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 101 ME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp CS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 97 48888887544 3599999999999999999999999 9999999999999999999999999999865422221
Q ss_pred CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCc--cccccc-----
Q 006178 522 NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPE--VMSYVV----- 592 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~--~~~~~~----- 592 (658)
.....++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .....+......+. ......
T Consensus 176 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 176 --YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred --ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 122334677999999876 5689999999999999999999999975432 22222222211110 000000
Q ss_pred -CCcC---CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 -DPEL---KHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 -~~~~---~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.... ... .+..+.++.+|+.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 000 11223568899999999999999999999863
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=353.21 Aligned_cols=254 Identities=17% Similarity=0.192 Sum_probs=196.0
Q ss_pred hcccccCCCCeeEEEEEecC-CCe----EEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++.. +.. +|+|.+..... ....+.+.+|+.++++++||||+++++++.+. ..+
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~ 90 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SLQ 90 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SEE
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---ccE
Confidence 34889999999999999753 444 56665532221 11223577899999999999999999998643 578
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 91 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 9999999999999997543 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH-HHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL-VDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 594 (658)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ......... ..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~------- 237 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER--LA------- 237 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB--CC-------
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC--CC-------
Confidence 4333222233334457999999999999999999999999999999 999997654322 222111100 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 238 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 238 ----QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ----CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ----CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111223466999999999999999999999999987643
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=345.15 Aligned_cols=252 Identities=22% Similarity=0.355 Sum_probs=201.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+++ ++.+|+|.+..... .....+.+.+|+.++++++||||+++++++.+.+....++||||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred HHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 4589999999999999986 78899998855432 23345679999999999999999999999988743377999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
+++|+|.+++.......+++.++..++.|++.||+|||++ + |+||||||+||++++++.+||+|||++.....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 9999999999876655699999999999999999999998 7 99999999999999999999998887653211
Q ss_pred CCCCCcccccCccccCCcccccCCCCc---cccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDV---QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~---ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
....++..|+|||.+.+..++. ++||||||+++|||+||+.||........ ........ ..
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~------~~--- 229 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI--GMKVALEG------LR--- 229 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH--HHHHHHSC------CC---
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH--HHHHHhcC------CC---
Confidence 1123456799999998765544 89999999999999999999975432211 11111110 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11222344668899999999999999999999999998764
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=351.09 Aligned_cols=247 Identities=11% Similarity=0.159 Sum_probs=196.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.+|+|.+.... .....+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 81 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFE 81 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEEE
Confidence 4588999999999999987 46778888774322 23456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--CCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~ 518 (658)
|+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++.+...
T Consensus 82 ~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 82 FISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 999999999997543 3599999999999999999999999 9999999999999997 789999999998765321
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. ......+++.|+|||.+.+..++.++|||||||++|||++|+.||..... ................. ..
T Consensus 158 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~---~~-- 227 (321)
T 1tki_A 158 D---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENIMNAEYTFDEE---AF-- 227 (321)
T ss_dssp C---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTCCCCCHH---HH--
T ss_pred C---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHcCCCCCChh---hh--
Confidence 1 11223356679999999988899999999999999999999999975432 22222221111100000 00
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 228 --~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 --KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1124568899999999999999999999985
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=360.30 Aligned_cols=259 Identities=20% Similarity=0.315 Sum_probs=205.7
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++. .++.||+|.+.... .......+.+|++++++++||||+++++++.+.+ ..
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~ 103 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PT 103 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SC
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--cc
Confidence 4589999999999999875 36778888874322 2234457899999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 436 MLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
++||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999987421 13579999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCc
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .........
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~-- 256 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEG-- 256 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHHHHHHTT--
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHHHHHHcC--
Confidence 9999987644332222223334567999999999999999999999999999999 89998654321 111111111
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 257 --------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~ 302 (322)
T 1p4o_A 257 --------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302 (322)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred --------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCC
Confidence 1111223344668899999999999999999999999999877543
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-42 Score=353.11 Aligned_cols=258 Identities=18% Similarity=0.269 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEe------cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
+.+.+.||+|+||.||+|++ .++..||+|.+.... .....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 34458999999999999985 245688888875322 223456799999999999 9999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcce
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGER----------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NI 496 (658)
..++||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+||||||+||
T Consensus 101 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 101 -PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred -CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 67999999999999999975432 2489999999999999999999999 999999999999
Q ss_pred eecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH
Q 006178 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV 575 (658)
Q Consensus 497 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~ 575 (658)
++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 999999999999999886543322111112223456999999999999999999999999999999 9999976543221
Q ss_pred --HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 576 --DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 576 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
........ . ..+...+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 257 ~~~~~~~~~~----------~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 FYKMIKEGFR----------M---LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHHTCC----------C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccCCC----------C---CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11111100 0 11122346688999999999999999999999999987653
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-42 Score=355.73 Aligned_cols=254 Identities=19% Similarity=0.228 Sum_probs=194.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeE----EEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEI----AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~v----avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. +++.+ ++|.+.... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~~ 92 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQ 92 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---EE
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---ce
Confidence 3489999999999999975 44444 555443221 2234567899999999999999999999998754 68
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+|+||+++|+|.+++..... .+++..++.|+.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999999976543 599999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH-HHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV-DWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 594 (658)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||........ ......
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~------------- 235 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG------------- 235 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-------------
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-------------
Confidence 4333333333344567999999999999999999999999999999 9999976543322 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.....+...+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 236 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 236 ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 01112223445688999999999999999999999999998754
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=352.52 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=205.6
Q ss_pred hhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|.+.. +..+|+|.+.... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 87 (288)
T 3kfa_A 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 87 (288)
T ss_dssp EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEE
Confidence 3345899999999999999875 6778888874322 23467899999999999999999999998877 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 9999999999999876666799999999999999999999999 9999999999999999999999999998765322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ......... .
T Consensus 165 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~-------------~ 230 (288)
T 3kfa_A 165 TY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-------------R 230 (288)
T ss_dssp SS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------C
T ss_pred cc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccC-------------C
Confidence 11 11111222456999999999999999999999999999999 99999754432 221111110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 112223346788999999999999999999999999987753
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=346.22 Aligned_cols=253 Identities=19% Similarity=0.248 Sum_probs=203.2
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+++.+|+|.+..... ..+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 84 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEF 84 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEECC
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeC
Confidence 4588999999999999998888999998854322 2357899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++........
T Consensus 85 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CTTCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHhhCcc-cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 999999999976533 589999999999999999999999 9999999999999999999999999998765321110
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .......... ....+
T Consensus 161 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~----------~~~~~ 227 (267)
T 3t9t_A 161 -SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGF----------RLYKP 227 (267)
T ss_dssp -STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC----------CCCCC
T ss_pred -ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCC----------cCCCC
Confidence 1111223456999999998999999999999999999999 89999654321 1111111110 00112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22346688999999999999999999999999988653
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=350.35 Aligned_cols=247 Identities=17% Similarity=0.139 Sum_probs=198.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~E 85 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVME 85 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEEe
Confidence 3489999999999999986 578899998854321 11223457889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 86 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp CCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999997543 489999999999999999999999 999999999999999999999999999875322211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .++
T Consensus 161 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~~-----------~~p 225 (337)
T 1o6l_A 161 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILMEEI-----------RFP 225 (337)
T ss_dssp --CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CCC
T ss_pred --cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHcCCC-----------CCC
Confidence 12223356779999999999999999999999999999999999975432 222222111110 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
...+..+.+++.+||+.||++|| +++|+++.
T Consensus 226 ~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 23346688999999999999999 89998764
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-42 Score=346.93 Aligned_cols=254 Identities=18% Similarity=0.267 Sum_probs=191.9
Q ss_pred hhhcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.+.||+|+||.||+|++.. +..+|+|..... ......+.+.+|+.++++++||||+++++++.+ + ..
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--~~ 90 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N--PV 90 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-S--SC
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-C--cc
Confidence 3345899999999999999753 345777776322 223445679999999999999999999999854 3 46
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 89999999999999997553 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 593 (658)
..... .....+.++..|+|||.+.+..++.++||||||+++|||++ |..||...... ....+..
T Consensus 167 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~------------- 232 (281)
T 1mp8_A 167 EDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN------------- 232 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-------------
T ss_pred Ccccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-------------
Confidence 43221 12223334567999999999999999999999999999997 99999754432 1111111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
......+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 233 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11111223345678899999999999999999999999998764
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-42 Score=356.30 Aligned_cols=259 Identities=22% Similarity=0.248 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES 430 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 430 (658)
+.+.+.||+|+||.||+|++. ++..||+|.+.... .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 334589999999999999874 45679998874322 233456789999999999 999999999999887
Q ss_pred CCCceEEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcce
Q 006178 431 SPFTRMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496 (658)
Q Consensus 431 ~~~~~~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NI 496 (658)
+ ..++||||+++|+|.+++..... ..+++.+++.++.||++||+|||++ +|+||||||+||
T Consensus 114 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 114 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp S--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred C--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 7 67999999999999999975432 2489999999999999999999999 999999999999
Q ss_pred eecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH
Q 006178 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV 575 (658)
Q Consensus 497 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~ 575 (658)
+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 999999999999999876543322222233334567999999998899999999999999999999 99999654322
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+......... ....+...+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 267 ~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 267 ELFKLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHHHHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2111111110 0111223346688999999999999999999999999998754
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=345.34 Aligned_cols=259 Identities=17% Similarity=0.185 Sum_probs=195.2
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+..+++.+|+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 81 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEH 81 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG--GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEEC
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc--cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEEe
Confidence 34789999999999999988999999998544321 223356889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 975 9999987543 3589999999999999999999999 9999999999999999999999999999875422211
Q ss_pred CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCc--cccc-----cc
Q 006178 522 NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPE--VMSY-----VV 592 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~~~-----~~ 592 (658)
.....++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... ..........+. .... ..
T Consensus 157 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 157 --YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred --cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 122234667999999876 458999999999999999999999997543211 111111111100 0000 00
Q ss_pred CCcCC--------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELK--------HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~--------~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
++... ......+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11110 1112244668899999999999999999998763
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-41 Score=351.64 Aligned_cols=251 Identities=19% Similarity=0.184 Sum_probs=198.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|.+. ++..||+|.+..... .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv 106 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLV 106 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEE
Confidence 444589999999999999986 578899998854432 2334567899999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+++..
T Consensus 107 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999997553 589999999999999999999999 999999999999998654 5999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... .....++..|+|||++.+..++.++|||||||++|||+||+.||..... ............. ...+.
T Consensus 182 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~---~~~~~ 253 (362)
T 2bdw_A 182 NDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAGAYD---YPSPE 253 (362)
T ss_dssp TTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCC---CCTTG
T ss_pred cCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCCCC---CCccc
Confidence 42211 1223356679999999999999999999999999999999999975432 1221111111000 00111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 254 ~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1234568899999999999999999999865
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-41 Score=359.13 Aligned_cols=252 Identities=17% Similarity=0.169 Sum_probs=197.9
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|... +++.+|+|++..+.. .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv 88 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYLI 88 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEEE
Confidence 344589999999999999975 678889988765432 2334567899999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec---CCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ +++.+||+|||+++..
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999998654 499999999999999999999999 999999999999998 4578999999999765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
....... ....+++.|+|||++.+..++.++||||+||++|||++|+.||...... ........... ....+.
T Consensus 164 ~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~---~~~~~~ 236 (444)
T 3soa_A 164 EGEQQAW--FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAY---DFPSPE 236 (444)
T ss_dssp CTTCCBC--CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCC---CCCTTT
T ss_pred cCCCcee--ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhCCC---CCCccc
Confidence 4322211 2233567799999999999999999999999999999999999654321 21121111110 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~----~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 237 WD----TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cc----cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11 234568899999999999999999999874
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=353.56 Aligned_cols=245 Identities=14% Similarity=0.192 Sum_probs=196.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+...... .....+.+.+|+++++.++||||+++++++.+.+ ..++|||
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E 89 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVIE 89 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEE
Confidence 4589999999999999974 6788999988543211 1223357889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+ +|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++........
T Consensus 90 ~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 90 YA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 99 789999987554 499999999999999999999999 999999999999999999999999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....++..|+|||.+.+..+ ++++|||||||++|||++|+.||...... ..... +.......
T Consensus 164 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------------~~~~~-i~~~~~~~ 227 (336)
T 3h4j_B 164 ---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------------NLFKK-VNSCVYVM 227 (336)
T ss_dssp ---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST------------TCBCC-CCSSCCCC
T ss_pred ---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH------------HHHHH-HHcCCCCC
Confidence 122335677999999988776 78999999999999999999999643211 11111 11111123
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 33445678899999999999999999999875
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=351.20 Aligned_cols=259 Identities=24% Similarity=0.347 Sum_probs=193.7
Q ss_pred hcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---c
Q 006178 362 FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---T 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~ 434 (658)
+.+.||+|+||.||+|+... +..||+|.+..... .....+.+.+|+.++++++||||+++++++.+.+.. .
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 34889999999999998653 34789998754332 233456789999999999999999999999875522 3
Q ss_pred eEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 435 RMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
.++||||+++|+|.+++... ....+++..++.++.|+++||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 59999999999999998532 234699999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCccc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVM 588 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~ 588 (658)
+++.+.............++..|+|||.+.+..++.++||||||+++|||+| |..||...... ...... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~---- 265 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL---HG---- 265 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH---TT----
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH---cC----
Confidence 9987644332222333344567999999999999999999999999999999 89998654432 111111 11
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 266 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 266 ------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp ------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11112223446788999999999999999999999999988654
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=359.30 Aligned_cols=264 Identities=15% Similarity=0.183 Sum_probs=199.4
Q ss_pred hhcccccCC--CCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 361 DFSNIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 361 ~f~~~lG~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.+.||+| +||.||+|++. +++.||+|++..... .....+.+.+|+.++++++|||||++++++.+.+ ..++
T Consensus 28 ~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 103 (389)
T 3gni_B 28 ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWV 103 (389)
T ss_dssp EEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEE
Confidence 345899999 99999999987 688999998865432 2344567889999999999999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999876555699999999999999999999999 999999999999999999999999998765432
Q ss_pred cCC-----CCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcC----
Q 006178 518 RSE-----KNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLEL---- 584 (658)
Q Consensus 518 ~~~-----~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~---- 584 (658)
... ........++..|+|||.+.+ ..++.++|||||||++|||+||+.||.......... .......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 111 111122244567999999987 679999999999999999999999997543221110 0000000
Q ss_pred C----cc-------------ccccc----------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 585 P----EV-------------MSYVV----------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 585 ~----~~-------------~~~~~----------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .. ..... +......+...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 00 00000 000001223345678999999999999999999999865
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=347.40 Aligned_cols=257 Identities=23% Similarity=0.310 Sum_probs=196.7
Q ss_pred hcccccCCCCeeEEEEEecCC----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++.++ ..+|+|.+... ......+.+.+|+.++++++||||+++++++.+.+. ..++
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 104 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEE
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccC---CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEE
Confidence 458999999999999997532 24677766422 223345678999999999999999999999765432 5799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999997543 3589999999999999999999999 999999999999999999999999999986543
Q ss_pred cCCC--CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccC
Q 006178 518 RSEK--NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 593 (658)
.... .......++..|+|||.+.+..++.++||||||+++|||+| |.+||...... ....... .
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~---~--------- 248 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ---G--------- 248 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT---T---------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc---C---------
Confidence 2211 11122223456999999999999999999999999999999 55666543321 1111111 1
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 249 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 249 -RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred -CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 001112223456889999999999999999999999999987654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=352.53 Aligned_cols=258 Identities=20% Similarity=0.327 Sum_probs=198.1
Q ss_pred cccccCCCCeeEEEEEecCC-----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGG-----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.||+|+||.||+|++... ..||+|.+.... .......+.+|++++++++||||+++++++.+.+ ..++
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 123 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMMI 123 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEE
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--CcEE
Confidence 47899999999999997532 358888874322 2334567899999999999999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999997543 2599999999999999999999999 999999999999999999999999999987643
Q ss_pred cCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... ....+.++..|+|||.+.+..++.++|||||||++|||+| |+.||...... ......... .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~-~--------- 267 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDG-F--------- 267 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT-C---------
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCC-C---------
Confidence 32211 1122233457999999999999999999999999999999 99999654321 111111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
....+...+..+.+++.+||+.||++||++.|+++.|+++......
T Consensus 268 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 268 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0111223446788999999999999999999999999998765443
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-41 Score=351.99 Aligned_cols=256 Identities=16% Similarity=0.159 Sum_probs=198.3
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecc-ccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.+.||+|+||.||+|++. +++.||+|.+..... .......+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~ 102 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLY 102 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 3455689999999999999986 578899998854321 111223567899999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceeccccc
Q 006178 437 LVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFDS 511 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl 511 (658)
+||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999887643 223589999999999999999999999 9999999999999986654 99999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
++........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||......... ...........
T Consensus 180 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~i~~~~~~~~~- 253 (351)
T 3c0i_A 180 AIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE---GIIKGKYKMNP- 253 (351)
T ss_dssp CEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHH---HHHHTCCCCCH-
T ss_pred eeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHH---HHHcCCCCCCc-
Confidence 9765432211 11223567799999999999999999999999999999999999754322111 11111000000
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 254 --~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 254 --RQW----SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --HHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --ccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 1123568899999999999999999999863
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=351.76 Aligned_cols=254 Identities=19% Similarity=0.254 Sum_probs=193.9
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh--ccCCCccceeeEEecCC--CCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESS--PFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~--~~~~~l 437 (658)
+.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.+.. ....++
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 458999999999999998 5788999987432 23456667777766 79999999999875432 125799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 99999999999999643 5899999999999999999999 77 9999999999999999999999999
Q ss_pred cchhhhhhcCCCC--CCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhC----------CCCCCCCC
Q 006178 510 DSWKTILARSEKN--PGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISG----------RPPCCKDK 571 (658)
Q Consensus 510 Gla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG----------~~p~~~~~ 571 (658)
|+++......... ......++..|+|||.+.+. .+++++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9987654322111 11122456779999999876 456799999999999999999 88885422
Q ss_pred ---CcHHHHHHHhhcCCcccccccCCcCC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 572 ---GNLVDWAKDYLELPEVMSYVVDPELK--HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 572 ---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
............. . ..+... ..+...+..+.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVD-Q-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHHHHHHHTTS-C-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhhhhHHHhcc-C-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1222221111111 0 011111 12345678899999999999999999999999999875
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=345.66 Aligned_cols=252 Identities=22% Similarity=0.331 Sum_probs=194.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e~ 80 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEY 80 (307)
T ss_dssp EEEEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEEC
T ss_pred eeeEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEEc
Confidence 3488999999999999985 578999987321 234678999999999999999999998864 35899999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC-ceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-PKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGla~~~~~~~ 519 (658)
+++|+|.+++..... ..+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 999999999986543 34789999999999999999999932129999999999999998886 7999999987653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
....++..|+|||.+.+..++.++||||||+++|||+||+.||................. .....
T Consensus 161 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----------~~~~~ 225 (307)
T 2eva_A 161 -----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG----------TRPPL 225 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT----------CCCCC
T ss_pred -----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC----------CCCCc
Confidence 122345679999999999999999999999999999999999975544332222111111 00111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
+...+..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 226 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 1223456889999999999999999999999999887543
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=352.61 Aligned_cols=250 Identities=16% Similarity=0.199 Sum_probs=192.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC--CCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||++...+++.||+|++..... .....+.+.+|+.++++++| |||+++++++.+.+ ..++||
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~ 88 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVM 88 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEEE
Confidence 4589999999999999998899999999864432 23345678999999999976 99999999999877 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+ .+|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++.+....
T Consensus 89 e~-~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 5789999998654 489999999999999999999999 999999999999997 5789999999998764333
Q ss_pred CCCCCcccccCccccCCccccc-----------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-----------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
.........++..|+|||++.+ ..++.++|||||||++|||+||+.||............ .......
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-~~~~~~~- 239 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHE- 239 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-HHCTTSC-
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH-HhcCCcc-
Confidence 2222223345678999999865 67899999999999999999999999754433322211 1111000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
..++...+..+.+++.+||+.||.+|||+.|+++.-
T Consensus 240 --------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 240 --------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp --------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 011222235678999999999999999999998763
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-42 Score=346.09 Aligned_cols=254 Identities=17% Similarity=0.278 Sum_probs=202.1
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|+..++..||+|.+..... ..+.+.+|++++++++||||+++++++.+. ..++|||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e 87 (279)
T 1qpc_A 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITE 87 (279)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEE
T ss_pred hheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-----cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEEe
Confidence 34589999999999999998888999998743321 245789999999999999999999998743 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 99999999999754433599999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +......... ....
T Consensus 165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~----------~~~~ 231 (279)
T 1qpc_A 165 T-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGY----------RMVR 231 (279)
T ss_dssp E-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC----------CCCC
T ss_pred c-cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhccc----------CCCC
Confidence 1 1111223456999999998899999999999999999999 99999654321 1211111110 0011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 223346788999999999999999999999999987653
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=344.03 Aligned_cols=253 Identities=18% Similarity=0.233 Sum_probs=201.7
Q ss_pred ccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.||+|+||.||+|.+. ++..||+|.+.... .....+.+.+|++++++++||||+++++++.. + ..++|||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e 89 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVME 89 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SEEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--CcEEEEE
Confidence 48999999999999864 56678998875432 23345679999999999999999999999954 3 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 90 MAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp CCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred eCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999997443 3599999999999999999999999 999999999999999999999999999886543221
Q ss_pred C-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 K-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .......++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ........ ....
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~----------~~~~ 233 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQG----------KRME 233 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTT----------CCCC
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcC----------CcCC
Confidence 1 11122233567999999998899999999999999999999 999997544321 11111111 0112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.+...+..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 234 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2334456788999999999999999999999999988653
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=355.33 Aligned_cols=266 Identities=18% Similarity=0.238 Sum_probs=199.6
Q ss_pred hhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
...+.||+|+||.||+|++ .+++.||+|++..... ....+.+.+|++++++++||||+++++++.+.+....
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp EEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3458899999999999984 3678899998854332 2234678999999999999999999999987744468
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence 999999999999999964432 599999999999999999999999 9999999999999999999999999998765
Q ss_pred hhcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc------cc
Q 006178 516 LARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE------VM 588 (658)
Q Consensus 516 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~------~~ 588 (658)
...... .......++..|+|||.+.+..++.++||||||+++|||+||..|+.... ..+......... ..
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM---ALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH---HHHHHHHCSCCGGGHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh---hHHhhccCCcccccCHHHHH
Confidence 432211 11112233456999999999999999999999999999999999864211 000000000000 00
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
...........+...+..+.+++.+||+.||++|||+.|+++.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 001111111233345577889999999999999999999999999875
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=379.26 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=198.3
Q ss_pred cccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.||+|+||.||+|.+. ++..||||.+.... .....++|.+|++++++++|||||++++++.. + ..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~--~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S--SEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C--CeEEEEEe
Confidence 7999999999999875 45578999875432 12345679999999999999999999999976 3 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 417 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 417 AGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred CCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 99999999997543 3699999999999999999999999 9999999999999999999999999999875432211
Q ss_pred -CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 -NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 -~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....+..+..|+|||++.+..++.++|||||||++|||+| |+.||........ ....... .....
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~i~~~----------~~~~~ 560 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MAFIEQG----------KRMEC 560 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH--HHHHHTT----------CCCCC
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHcC----------CCCCC
Confidence 11122333467999999999999999999999999999998 9999976543221 1111111 11122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+..++..+.+|+.+||+.||++||++.+|++.|+.+..
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 33455778899999999999999999999999998653
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=379.50 Aligned_cols=254 Identities=17% Similarity=0.250 Sum_probs=203.8
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.++..||||++..... ..++|.+|++++++++||||+++++++.+ + ..++||||
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~e~ 342 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEY 342 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECC
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEeeeh
Confidence 4589999999999999999888899998854321 24579999999999999999999999876 4 56999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.++++......+++.++..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999999754334589999999999999999999999 9999999999999999999999999999865321100
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.......+..|+|||.+....++.++|||||||++|||+| |+.||...... +........ . ....+
T Consensus 420 -~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~-~---------~~~~~ 486 (535)
T 2h8h_A 420 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERG-Y---------RMPCP 486 (535)
T ss_dssp -TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTT-C---------CCCCC
T ss_pred -cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-C---------CCCCC
Confidence 1111223456999999999999999999999999999999 99999654321 111111111 0 01122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..++..+.+|+.+||+.||++|||+.+|++.|+.+....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 334567889999999999999999999999999987643
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=357.67 Aligned_cols=243 Identities=19% Similarity=0.167 Sum_probs=190.7
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.++||+|+||.||+|+... ++.+|+|++...... .....+.+.+|..++.++ +||||+++++++.+.+ ..++||
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lV~ 132 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVI 132 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEEEE
Confidence 34899999999999999874 667888887543322 222334678999999888 8999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 133 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 133 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 9999999999997654 499999999999999999999999 99999999999999999999999999987532221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-------cHHHHHHHhhcCCccccccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-------NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 592 (658)
. ......++..|+|||++.+..++.++|||||||++|||++|+.||..... .............
T Consensus 208 ~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 278 (396)
T 4dc2_A 208 D--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 278 (396)
T ss_dssp C--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-------
T ss_pred C--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-------
Confidence 1 12223456789999999999999999999999999999999999964321 1111111111111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
..++...+..+.+|+.+||+.||++||++
T Consensus 279 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 ----IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11233344678899999999999999995
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=380.17 Aligned_cols=251 Identities=22% Similarity=0.296 Sum_probs=198.5
Q ss_pred ccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.||+|+||.||+|.+. .++.||||++.... ......+++.+|++++++++|||||++++++... ..++|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~E 449 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 449 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEEE
Confidence 57999999999999764 45689999875432 2233456899999999999999999999999754 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+.....
T Consensus 450 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 450 MAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp CCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred ccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 999999999997654 489999999999999999999999 999999999999999999999999999987653322
Q ss_pred C-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 K-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .....+.++..|+|||++.+..++.++|||||||++|||+| |+.||........ ....... ....
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~i~~~----------~~~~ 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAMLEKG----------ERMG 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTT----------CCCC
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcC----------CCCC
Confidence 1 12222334567999999999999999999999999999999 9999976543211 1111111 1112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.+..++..+.+++.+||+.||++||++.+|++.|+++.
T Consensus 593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 23344577889999999999999999999999998764
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=353.43 Aligned_cols=247 Identities=13% Similarity=0.126 Sum_probs=196.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~e 95 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVD 95 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 4589999999999999986 467788888754321 12233467889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 96 ~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 96 LLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp CCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 999999999998654 499999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcC
Q 006178 521 KNPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.......++..|+|||++.. ..++.++|||||||++|||+||+.||..... .............
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~----------- 236 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV----------- 236 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-----------
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-----------
Confidence 11222345677999999874 4589999999999999999999999975432 2222222221111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPS-MQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~ 630 (658)
..++...+..+.+|+.+||+.||++||+ ++++.+
T Consensus 237 ~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1122334467889999999999999998 666654
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-41 Score=343.75 Aligned_cols=251 Identities=16% Similarity=0.163 Sum_probs=189.8
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccc----------------------hhhHHHHHHHHHHHHhccC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT----------------------GYLELYFQREVADLARINH 417 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~H 417 (658)
.+.+.||+|+||.||+|++. +++.||+|.+........ ....+.+.+|++++++++|
T Consensus 16 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 95 (298)
T 2zv2_A 16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDH 95 (298)
T ss_dssp EEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCC
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCC
Confidence 34589999999999999976 577899998865431110 1123468899999999999
Q ss_pred CCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 418 ~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
|||+++++++.+......++||||+++|+|.+++... .+++.++..++.||++||+|||++ +|+||||||+|||
T Consensus 96 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLL 169 (298)
T ss_dssp TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence 9999999999875444789999999999999876532 599999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCC---CCccccchhhHHHHHHHHhCCCCCCCCCCcH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARH---LDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~---~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~ 574 (658)
++.++.+||+|||+++........ .....++..|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-- 245 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI-- 245 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred ECCCCCEEEecCCCcccccccccc--ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence 999999999999998765432211 11223567799999998755 47899999999999999999999965432
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+.......... .+.. ...+..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~-----~~~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 MCLHSKIKSQALE-----FPDQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHHCCCC-----CCSS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHhcccCC-----CCCc----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2222111111000 0111 122356889999999999999999999875
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=352.07 Aligned_cols=256 Identities=11% Similarity=0.120 Sum_probs=199.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+.. +++.||+|.+..... .+.+.+|+++++++ +||||+++++++.+.+ ..++||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~ 84 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVL 84 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEE
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEE
Confidence 3489999999999999974 678899998754322 13478999999999 9999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC-----ceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~ 514 (658)
||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EeC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 999 899999998643 3699999999999999999999999 9999999999999998887 99999999987
Q ss_pred hhhcCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCccc
Q 006178 515 ILARSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVM 588 (658)
Q Consensus 515 ~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 588 (658)
+....... ......++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 54322211 11233456789999999999999999999999999999999999976432 2222222111100000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
. .... ....+ ++.+++.+||+.||.+||++.+|.+.|+++..
T Consensus 240 ~---~~~~---~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 P---IEVL---CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp C---HHHH---TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred C---HHHH---hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 0 0000 00122 78899999999999999999999999987754
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=340.24 Aligned_cols=259 Identities=13% Similarity=0.122 Sum_probs=195.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+|++. +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 81 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFE 81 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEEe
Confidence 3478999999999999986 578899998864432 2334467889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9975 6666665433 2599999999999999999999999 999999999999999999999999999976532222
Q ss_pred CCCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcCC--ccccccc---
Q 006178 521 KNPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLELP--EVMSYVV--- 592 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~~--~~~~~~~--- 592 (658)
. .....++..|+|||.+.+.. ++.++|||||||++|||+||..||.......... +......+ .......
T Consensus 157 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 C--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred c--ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 1 22233466799999998765 8999999999999999999988864433221111 11111110 0000000
Q ss_pred ----------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 ----------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ----------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...........+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 001111223345678899999999999999999999863
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=350.66 Aligned_cols=246 Identities=17% Similarity=0.212 Sum_probs=184.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+.... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 128 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLE 128 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEEE
Confidence 3488999999999999987 46789999875332 2346889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~ 517 (658)
|+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999997554 489999999999999999999999 9999999999999975 88999999999886532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.. ......++..|+|||.+.+..++.++|||||||++|||+||+.||.........+ ........ ....+
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~i~~~~~---~~~~~--- 273 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF-RRILNCEY---YFISP--- 273 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH-HHHHTTCC---CCCTT---
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH-HHHHhCCC---ccCCc---
Confidence 21 1122335677999999999999999999999999999999999997654432211 11111110 01111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 274 -~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 274 -WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112234568899999999999999999999874
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=350.88 Aligned_cols=250 Identities=16% Similarity=0.217 Sum_probs=193.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--------
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP-------- 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------- 432 (658)
+.+.||+|+||.||+|++. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+...
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 3489999999999999987 78899999986433 22345679999999999999999999999865432
Q ss_pred -----------------------------------------------CceEEEEEecCCCChhhhhccCCC-CCCCHHHH
Q 006178 433 -----------------------------------------------FTRMLVFDYASNGTLYEHLHYGER-CQVSWTRR 464 (658)
Q Consensus 433 -----------------------------------------------~~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~~ 464 (658)
...++||||+++|+|.+++..... ...++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 137999999999999999986542 34677789
Q ss_pred HHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC----------CCCcccccCcccc
Q 006178 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK----------NPGTLGSQGAICI 534 (658)
Q Consensus 465 ~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~~~~~~~ 534 (658)
+.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ .......++..|+
T Consensus 167 ~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 243 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM 243 (332)
T ss_dssp HHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred HHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence 99999999999999999 9999999999999999999999999999876433211 1112234567799
Q ss_pred CCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHc
Q 006178 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLC 614 (658)
Q Consensus 535 aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 614 (658)
|||.+.+..++.++|||||||++|||++|..|+.. ........ ...............+.+++.+|
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDV----------RNLKFPLLFTQKYPQEHMMVQDM 309 (332)
T ss_dssp CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHH----------HTTCCCHHHHHHCHHHHHHHHHH
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHh----------hccCCCcccccCChhHHHHHHHH
Confidence 99999999999999999999999999999877421 11111111 11111111233446678999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 006178 615 VNPDITKRPSMQELCTM 631 (658)
Q Consensus 615 l~~dP~~RPs~~evl~~ 631 (658)
|+.||++|||+.|+++.
T Consensus 310 l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 310 LSPSPTERPEATDIIEN 326 (332)
T ss_dssp HCSSGGGSCCHHHHHHS
T ss_pred ccCCCCcCCCHHHHhhc
Confidence 99999999999999863
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=352.51 Aligned_cols=256 Identities=22% Similarity=0.319 Sum_probs=201.5
Q ss_pred hhcccccCCCCeeEEEEEecC-C-----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-G-----PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||.||+|.+.. + ..||+|.+.... .....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 123 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG-- 123 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC--
Confidence 345899999999999999753 2 368888874322 223456789999999999 8999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC
Q 006178 434 TRMLVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 501 (658)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 6799999999999999987431 23589999999999999999999999 99999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH--HHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV--DWA 578 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~--~~~ 578 (658)
+.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |..||........ ...
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 280 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence 9999999999986643322111112223456999999999999999999999999999999 9999975443221 111
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...... ..+...+..+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 281 ~~~~~~-------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 281 KDGYQM-------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCC-------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 111100 1112224568899999999999999999999999998764
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=355.47 Aligned_cols=250 Identities=16% Similarity=0.205 Sum_probs=192.9
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++ ||||+++++++...+ ..++|
T Consensus 59 ~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv 134 (390)
T 2zmd_A 59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMV 134 (390)
T ss_dssp EEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEE
Confidence 34589999999999999998889999998865432 2344567999999999996 599999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|| +.+++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++.+...
T Consensus 135 ~E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EE-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred Ee-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 99 45789999998654 589999999999999999999999 999999999999995 578999999999876433
Q ss_pred CCCCCCcccccCccccCCccccc-----------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 519 SEKNPGTLGSQGAICILPSSLEA-----------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
..........++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ..........
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~-~~~~~~~~~~ 286 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-LHAIIDPNHE 286 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHCTTSC
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH-HHHHhCcccc
Confidence 22222223345678999999865 46899999999999999999999999754332222 1221111100
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .++...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 287 ------~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 287 ------I---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ------C---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------C---CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0 1111123568899999999999999999999865
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-42 Score=365.68 Aligned_cols=265 Identities=14% Similarity=0.149 Sum_probs=201.7
Q ss_pred cHHHHHHHHhhhc--ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE
Q 006178 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (658)
Q Consensus 351 ~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 427 (658)
.+.++...+++|. ++||+|+||+||+|++.+ ++.+|+|++...... .....+.+.+|+.++..++||||+++++++
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh-hHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3445555556665 899999999999999875 667888887542211 112233488999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
.+.+ ..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 144 ~~~~--~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 144 QDDN--NLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp ECSS--EEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCC--EEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEc
Confidence 9887 7899999999999999998633 2599999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhh
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL 582 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 582 (658)
|||+|+........ ......+++.|+|||++. ...++.++|||||||++|||+||+.||...... +......
T Consensus 218 DFGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--~~~~~i~ 294 (437)
T 4aw2_A 218 DFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIM 294 (437)
T ss_dssp CCTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHH
T ss_pred chhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--HHHHhhh
Confidence 99999765332211 112234567899999987 467999999999999999999999999754321 1111111
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
.... .. .........+..+.+|+.+||+.+|++ ||+++|+++.
T Consensus 295 ~~~~---~~---~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 295 NHKE---RF---QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp THHH---HC---CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hccc---cc---cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1000 00 000111123356889999999998888 9999999875
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=350.35 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=191.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 168 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEYV 168 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 67999999999999975 57889999875432 123567899999999999999999999999877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee--cCCCCceeccccchhhhhhcCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL--TEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGla~~~~~~~~ 520 (658)
++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+.....
T Consensus 169 ~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 169 DGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp TTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 9999999987543 3589999999999999999999999 99999999999999 5678899999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ............. ......
T Consensus 245 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~~~~~~---~~~~~~--- 313 (373)
T 2x4f_A 245 ---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--ETLNNILACRWDL---EDEEFQ--- 313 (373)
T ss_dssp ---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCCCS---CSGGGT---
T ss_pred ---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCCC---Chhhhc---
Confidence 12223567799999999889999999999999999999999999754321 1222221111000 011111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+|+.+||+.||++|||+.|+++.
T Consensus 314 -~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 314 -DISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 223568899999999999999999999873
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=351.04 Aligned_cols=259 Identities=19% Similarity=0.231 Sum_probs=201.8
Q ss_pred hcccccCCCCeeEEEEEe------cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.||+|+||.||+|++ .+++.||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+. .
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~-~ 106 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-P 106 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-C
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC-c
Confidence 348999999999999985 245788888874322 223446789999999999 79999999999877542 4
Q ss_pred eEEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC
Q 006178 435 RMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 500 (658)
.++||||+++|+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE 183 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECC
Confidence 7999999999999999986542 1289999999999999999999999 9999999999999999
Q ss_pred CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHH
Q 006178 501 DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 501 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 579 (658)
++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||.......... .
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~-~ 262 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-R 262 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH-H
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHH-H
Confidence 99999999999976543222111112223456999999999999999999999999999999 999997544322111 1
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
..... .. ...+...+..+.+++.+||+.||.+|||+.|+++.|+.+.+.
T Consensus 263 ~~~~~-~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 263 RLKEG-TR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHHHT-CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhccC-cc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11111 00 011122345688999999999999999999999999988753
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=348.05 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=188.3
Q ss_pred hhcccccCCCCeeEEEEEe----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|+. .+++.+|+|.+..............+.+|++++++++||||+++++++.+.+ ..+
T Consensus 20 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~ 97 (327)
T 3a62_A 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KLY 97 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS--CEE
T ss_pred EEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EEE
Confidence 3458999999999999997 4688999998865432222233456889999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 98 LILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999997544 489999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
...... ....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............
T Consensus 173 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~---------- 238 (327)
T 3a62_A 173 HDGTVT--HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTIDKILKCKL---------- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTCC----------
T ss_pred cCCccc--cccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCCC----------
Confidence 222111 122346679999999999999999999999999999999999975432 122222211110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
.++...+..+.+++.+||+.||++|| ++.|+++.
T Consensus 239 -~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 -NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11223346688999999999999999 77787764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=355.70 Aligned_cols=272 Identities=18% Similarity=0.237 Sum_probs=203.2
Q ss_pred hhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||.||+|++ .++..||+|++... .....+.+.+|++++++++||||+++++++...+....
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 3458999999999999984 35778999987433 22345678999999999999999999999875544478
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 999999999999999975332 599999999999999999999999 9999999999999999999999999998865
Q ss_pred hhcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcC---Ccccccc
Q 006178 516 LARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL---PEVMSYV 591 (658)
Q Consensus 516 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~---~~~~~~~ 591 (658)
...... .......++..|+|||.+.+..++.++||||||+++|||+||+.||................. .......
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 422211 112223345569999999999999999999999999999999999853221110000000000 0000001
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
........+...+..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1111112234455778899999999999999999999999999876544
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=343.07 Aligned_cols=256 Identities=20% Similarity=0.267 Sum_probs=199.0
Q ss_pred cccccCCCCeeEEEEEecCC-C---eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGG-P---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~-~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.||+|+||.||+|++.++ . .+|+|.+... ......+.+.+|+.++++++||||+++++++.+.+. ..++|
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v 101 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI---TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVL 101 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEE
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeecccc---ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEE
Confidence 37899999999999996432 2 5788876422 223345678999999999999999999999986652 34899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+.+|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+...
T Consensus 102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999997643 3689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC--CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCC-CCCCC-cHHHHHHHhhcCCcccccccCC
Q 006178 519 SE--KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC-CKDKG-NLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 519 ~~--~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. ........++..|+|||.+.+..++.++||||||+++|||+||..|+ ..... ..........
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------------ 245 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR------------ 245 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC------------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC------------
Confidence 21 11222233456799999999999999999999999999999965554 33222 1221111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
....+...+..+.+++.+||+.||.+|||+.|+++.|+++....
T Consensus 246 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 246 -RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 01112223466889999999999999999999999999987643
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=350.35 Aligned_cols=249 Identities=14% Similarity=0.183 Sum_probs=196.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. +++.+|+|.+.... ......+.+|++++++++||||+++++++.+.. ..++||
T Consensus 54 ~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~ 127 (387)
T 1kob_A 54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLIL 127 (387)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEE
Confidence 34589999999999999986 56778887774332 123457889999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--CCCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~ 517 (658)
||+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++.+..
T Consensus 128 E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 128 EFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp ECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999999997543 2589999999999999999999999 9999999999999974 46799999999876532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. .......++..|+|||++.+..++.++|||||||++|||+||+.||..... ............. .++.
T Consensus 204 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~----~~~~-- 272 (387)
T 1kob_A 204 D---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDWE----FDED-- 272 (387)
T ss_dssp T---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCCC----CCSS--
T ss_pred C---cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCC----CCcc--
Confidence 2 112223456779999999999999999999999999999999999975432 1111111111000 0110
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 273 -~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 -AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 111234568899999999999999999999875
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=346.22 Aligned_cols=252 Identities=16% Similarity=0.251 Sum_probs=193.5
Q ss_pred hhcccccCCCCeeEEEEEecCC--------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGG--------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~--------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 432 (658)
.+.+.||+|+||.||+|++... ..||+|.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred eeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 3458999999999999997642 358888774322 234567999999999999999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--------c
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--------P 504 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~ 504 (658)
..++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +
T Consensus 86 -~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 -ENILVQEFVKFGSLDTYLKKNKN-CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp -CCEEEEECCTTCBHHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred -CCEEEEECCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccccee
Confidence 66999999999999999986533 489999999999999999999999 9999999999999998887 9
Q ss_pred eeccccchhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhc
Q 006178 505 KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE 583 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 583 (658)
||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+||..|+......... ... ..
T Consensus 161 kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-~~~-~~ 232 (289)
T 4fvq_A 161 KLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-LQF-YE 232 (289)
T ss_dssp EECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHH-HH
T ss_pred eeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-HHH-hh
Confidence 99999988654211 11223456999999987 67999999999999999999965544332221111 111 11
Q ss_pred CCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 584 LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
........ .+..+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 233 ~~~~~~~~-----------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 233 DRHQLPAP-----------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp TTCCCCCC-----------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred ccCCCCCC-----------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 11111111 123467999999999999999999999999998875443
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=353.09 Aligned_cols=248 Identities=18% Similarity=0.159 Sum_probs=195.4
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|++. +++.||+|++..... ......+.+.+|.++++.+ +||||+++++++.+.+ ..++
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 101 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFF 101 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEE
Confidence 334589999999999999986 578899998854321 1223345688999999998 7999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 102 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999997654 499999999999999999999999 999999999999999999999999999875322
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
... ......++..|+|||++.+..++.++|||||||++|||+||+.||..... ............
T Consensus 177 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~----------- 241 (353)
T 3txo_A 177 NGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILNDEV----------- 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------
T ss_pred CCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCC-----------
Confidence 211 12223456779999999998999999999999999999999999975432 222222221111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSM------QELCT 630 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~------~evl~ 630 (658)
.++...+..+.+++.+||+.||++||++ .|+++
T Consensus 242 ~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1222234568899999999999999998 66664
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=339.30 Aligned_cols=266 Identities=19% Similarity=0.171 Sum_probs=198.4
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCCC
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPF 433 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.+.||+|+||.||+|++. +++.||+|++...... ........+.+|++++++++ ||||+++++++......
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~ 89 (308)
T 3g33_A 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD 89 (308)
T ss_dssp CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence 3444589999999999999974 6788999998654421 11222345678888887775 99999999999765421
Q ss_pred ---ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 434 ---TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 434 ---~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
..++||||+. |+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 90 REIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp SEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred CceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCc
Confidence 4689999996 5999999877665699999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCc--c
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPE--V 587 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~ 587 (658)
+++..... .......++..|+|||.+.+..++.++|||||||++|||+||+.||....... ...+......+. .
T Consensus 166 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 166 LARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp CTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 99765322 12223345677999999999999999999999999999999999997644221 111111111100 0
Q ss_pred ccc-------ccCCcCC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSY-------VVDPELK----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~-------~~~~~~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... ...+... ...++.+..+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 0000000 0011234678899999999999999999999863
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=348.87 Aligned_cols=260 Identities=19% Similarity=0.224 Sum_probs=200.5
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 433 (658)
+.+.+.||+|+||.||+|++. ++..||+|.+.... ......++.+|+.++++++||||+++++++.+.+
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 334589999999999999843 46689999874321 2334567899999999999999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCce
Q 006178 434 TRMLVFDYASNGTLYEHLHYGER-----CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPK 505 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~k 505 (658)
..++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 67999999999999999985432 3589999999999999999999999 9999999999999994 44699
Q ss_pred eccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcC
Q 006178 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLEL 584 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 584 (658)
|+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .........
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~ 261 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSG 261 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTT
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcC
Confidence 999999987654333223333344567999999999999999999999999999999 99999654321 111111111
Q ss_pred CcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
. ....+...+..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 262 -~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 262 -G---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp -C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -C---------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 0 01112233466889999999999999999999999999887643
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=351.08 Aligned_cols=268 Identities=18% Similarity=0.233 Sum_probs=203.5
Q ss_pred hcccccCCCCeeEEEEEec-----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||++.+. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+....+
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3488999999999998753 57789999885332 233456799999999999999999999999876544789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 112 lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999999754 389999999999999999999999 99999999999999999999999999988754
Q ss_pred hcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHH---hhcCCccccccc
Q 006178 517 ARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD---YLELPEVMSYVV 592 (658)
Q Consensus 517 ~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~ 592 (658)
..... .......++..|+|||.+.+..++.++||||||+++|||+||+.||............. ............
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 32211 11122334556999999999999999999999999999999999986422111100000 000000000001
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.......+...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 1111123334456789999999999999999999999999987654
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=342.10 Aligned_cols=253 Identities=17% Similarity=0.208 Sum_probs=197.3
Q ss_pred hcccccCCCCeeEEEEEecCC----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++.+. ..||+|.+.... .....+.+.+|+.++++++||||+++++++.+. ..++
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 89 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTWI 89 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCEE
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCEE
Confidence 348999999999999986532 248888764322 223456799999999999999999999998754 3589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999997543 2589999999999999999999999 999999999999999999999999999886543
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.... ......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... ..........
T Consensus 166 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~------------ 232 (281)
T 3cc6_A 166 EDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR------------ 232 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC------------
T ss_pred cccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC------------
Confidence 2211 1122233456999999999999999999999999999999 99999654322 2222111100
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+...++.+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 233 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 233 -LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 011222345688999999999999999999999999988653
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=350.67 Aligned_cols=267 Identities=12% Similarity=0.072 Sum_probs=194.5
Q ss_pred hhcccccCCCCeeEEEEEec----CCCeEEEEEEeeecccc-------chhhHHHHHHHHHHHHhccCCCccceeeEEec
Q 006178 361 DFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHW-------TGYLELYFQREVADLARINHENTGKLLGYCRE 429 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 429 (658)
.+.+.||+|+||.||+|++. .+..+|+|+........ .....+.+.+|+..++.++||||+++++++..
T Consensus 40 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~ 119 (345)
T 2v62_A 40 VLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT 119 (345)
T ss_dssp EEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEE
T ss_pred EEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccc
Confidence 34589999999999999986 56788998876443211 01122347788999999999999999999877
Q ss_pred C--CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC--Cce
Q 006178 430 S--SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF--SPK 505 (658)
Q Consensus 430 ~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~--~~k 505 (658)
. +....++||||+ +++|.+++...+ .+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++ .+|
T Consensus 120 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 120 EFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp ESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEE
T ss_pred ccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEE
Confidence 2 122789999999 999999998654 599999999999999999999999 999999999999999887 999
Q ss_pred eccccchhhhhhcCCCCC-----CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--H
Q 006178 506 LVDFDSWKTILARSEKNP-----GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--A 578 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~ 578 (658)
|+|||+++.+........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||.......... .
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 999999987643322111 122345677999999999999999999999999999999999996432222111 1
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
..... ............ ....+..+.+++.+||+.||++|||+.+|++.|+++..
T Consensus 274 ~~~~~--~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLL--DELPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHH--HTTTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhc--ccccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11110 001110000000 00233568899999999999999999999999998653
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=343.97 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=197.7
Q ss_pred cccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.||+|+||.||+|.+. .++.||+|.+..... .....+++.+|++++++++||||+++++++.. + ..++||||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e~ 98 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVMEM 98 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEEC
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEEe
Confidence 8999999999999653 357889988754322 23345679999999999999999999999943 3 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 99 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 99 AELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp CTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 99999999998654 489999999999999999999999 9999999999999999999999999998765332211
Q ss_pred -CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 -NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 -~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....+.++..|+|||.+.+..++.++||||||+++|||+| |+.||........ ....... . ....
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~~-~---------~~~~ 241 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAMLEKG-E---------RMGC 241 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTT-C---------CCCC
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHHHHcC-C---------CCCC
Confidence 11122333467999999998889999999999999999999 9999975443211 1111111 0 1112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+...+..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 242 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 242 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 233456788999999999999999999999999988654
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=342.20 Aligned_cols=244 Identities=15% Similarity=0.175 Sum_probs=197.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+.+|+.+++.++||||+++++++.+.+ ..++|||
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~e 86 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMD 86 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEEe
Confidence 3489999999999999986 6788999988543211 1223456889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 87 YIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 999999999998654 489999999999999999999999 9999999999999999999999999999764321
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .++
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~-----------~~p 223 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKILNAEL-----------RFP 223 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHCCC-----------CCC
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC-----------CCC
Confidence 1223356679999999999999999999999999999999999965432 222222221110 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
...+..+.+++.+||+.||++|| +++|+++.
T Consensus 224 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 23346688999999999999999 88888853
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-40 Score=339.48 Aligned_cols=253 Identities=20% Similarity=0.232 Sum_probs=200.1
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||.||+|++. +++.+|+|.+....... .....+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 91 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVV 91 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEE
Confidence 445689999999999999986 57889999886544221 1223567999999999999999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccch
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSW 512 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla 512 (658)
+||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++++++ .+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999997543 589999999999999999999999 999999999999999887 7999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
+....... .....++..|+|||.+.+..++.++||||||+++|||+||+.||..... ..................
T Consensus 167 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~ 241 (321)
T 2a2a_A 167 HEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITSVSYDFDEEF 241 (321)
T ss_dssp EECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCCCCCHHH
T ss_pred eecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcccccChhh
Confidence 76543211 1222356679999999999999999999999999999999999965432 122222111110000000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+++.+||+.||++|||+.|+++.
T Consensus 242 -------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 242 -------FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -------hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01123568899999999999999999999874
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-41 Score=346.32 Aligned_cols=242 Identities=18% Similarity=0.217 Sum_probs=177.9
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|++. +++.||+|.+... ....+.+|+.+++++. ||||+++++++.+.. ..++||||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~ 87 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVMEL 87 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEEc
Confidence 68999999999999986 5788999987432 2356789999999996 999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 88 LNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 99999999998654 599999999999999999999999 999999999999998765 7999999998754322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-----cHHHHHHHhhcCCcccccccC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-----NLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 593 (658)
... .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+........
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~--------- 231 (325)
T 3kn6_A 163 NQP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG--------- 231 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT---------
T ss_pred CCc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC---------
Confidence 211 1222346679999999999999999999999999999999999975432 112222221111
Q ss_pred CcCCCCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFS---YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~---~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 232 -~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 232 -DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp -CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred -CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 111011 1234678899999999999999999998754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=349.33 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=189.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+++.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 23 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 95 (361)
T 3uc3_A 23 DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-----IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIM 95 (361)
T ss_dssp EEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEE
Confidence 34589999999999999987 678899998854322 2346889999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--ceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~~~ 517 (658)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 96 EYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 9999999999997544 499999999999999999999999 9999999999999987765 99999999875322
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCcc-ccchhhHHHHHHHHhCCCCCCCCC--CcHHHHHHHhhcCCcccccccCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQ-GNIYAFGVLLLEIISGRPPCCKDK--GNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~k-sDVwS~Gvvl~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. ......++..|+|||.+.+..++.+ +|||||||++|||++|+.||.... ..................
T Consensus 171 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~----- 242 (361)
T 3uc3_A 171 HS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP----- 242 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC-----
T ss_pred cC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC-----
Confidence 11 1122335677999999988887655 899999999999999999997533 223333332222111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 243 ~----~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 D----DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp T----TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C----cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 01123567899999999999999999999875
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=357.14 Aligned_cols=271 Identities=10% Similarity=0.114 Sum_probs=204.1
Q ss_pred hhcccccCCCCeeEEEEEecC---------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccc---------
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG---------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGK--------- 422 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~--------- 422 (658)
.+.+.||+|+||.||+|++.. ++.||+|.+... +.+.+|++++++++||||++
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 345899999999999999874 788999987432 24789999999999999988
Q ss_pred ------eeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcce
Q 006178 423 ------LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496 (658)
Q Consensus 423 ------l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NI 496 (658)
+++++...+. ..++||||+ +++|.+++.......+++.++..++.||+.||+|||++ +|+||||||+||
T Consensus 116 ~~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp TCSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred ccCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 5667665222 789999999 99999999866445699999999999999999999999 999999999999
Q ss_pred eecCCC--CceeccccchhhhhhcCCCCC-----CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCC
Q 006178 497 YLTEDF--SPKLVDFDSWKTILARSEKNP-----GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCK 569 (658)
Q Consensus 497 Ll~~~~--~~kl~DFGla~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~ 569 (658)
+++.++ .+||+|||+++.+........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 899999999987654322111 1222456779999999999999999999999999999999999975
Q ss_pred CCCcHH---HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhcc
Q 006178 570 DKGNLV---DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKA 646 (658)
Q Consensus 570 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 646 (658)
...... .......... ....+.... ....+..+.+++.+||+.||++|||+.|+++.|+++...... ...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~--~~~ 343 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVDKP---GPFVGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV--SPY 343 (352)
T ss_dssp GTTCHHHHHHHHHHHHHSC---CCEECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC--CTT
T ss_pred CCcCHHHHHHHHHhccCCh---hhhhhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC--CcC
Confidence 432221 1211111111 111111100 011235688999999999999999999999999998754322 123
Q ss_pred chhHHh
Q 006178 647 SSLAWA 652 (658)
Q Consensus 647 ~~~~~~ 652 (658)
.+.+|.
T Consensus 344 ~~~dw~ 349 (352)
T 2jii_A 344 DPIGLP 349 (352)
T ss_dssp SCCCCC
T ss_pred ccccCc
Confidence 455554
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=333.71 Aligned_cols=251 Identities=16% Similarity=0.191 Sum_probs=197.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 84 (276)
T 2yex_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFL 84 (276)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEE
Confidence 34589999999999999986 678899998754332 223467899999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..+....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 9999999999997543 489999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.........++..|+|||.+.+..+ +.++||||||+++|||+||+.||.........+.... ...... .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~---------~ 229 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-EKKTYL---------N 229 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH-TTCTTS---------T
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh-hccccc---------C
Confidence 2111222334667999999987765 7899999999999999999999976543322221111 110000 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 011234567899999999999999999999763
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=342.66 Aligned_cols=248 Identities=23% Similarity=0.299 Sum_probs=193.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+.. ++.||+|.+.... ..+.+.+|++++++++||||+++++++.+.+. ..++||||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~ 96 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 96 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECC
T ss_pred EEeEEecCCCceEEEEEEc-CCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEec
Confidence 4589999999999999885 6789999874322 24578999999999999999999999765432 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 9999999999765443489999999999999999999999 99999999999999999999999999987643221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....+..|+|||.+.+..++.++||||||+++|||+| |+.||........ ....... .....+
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~~~~~----------~~~~~~ 236 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEKG----------YKMDAP 236 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHHHTTT----------CCCCCC
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhcC----------CCCCCc
Confidence 12233566999999999999999999999999999999 9999975432211 1111110 011122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 3345678899999999999999999999999998764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=344.55 Aligned_cols=243 Identities=19% Similarity=0.160 Sum_probs=192.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|++. +++.+|+|++..... ......+.+.+|..++.++ +||||+++++++.+.+ ..++||
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~ 89 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVI 89 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEEE
Confidence 3489999999999999986 467888888754332 2233456788999999998 8999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 90 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999997544 499999999999999999999999 99999999999999999999999999987532211
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-------cHHHHHHHhhcCCccccccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-------NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 592 (658)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .............
T Consensus 165 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 235 (345)
T 3a8x_A 165 D--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 235 (345)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-------
T ss_pred C--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-------
Confidence 1 12223456779999999999999999999999999999999999964221 1111111111110
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
..++...+..+.+++.+||+.||++||++
T Consensus 236 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 236 ----IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11223344678899999999999999995
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=346.77 Aligned_cols=243 Identities=17% Similarity=0.178 Sum_probs=197.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++. +++.||+|.+...... .....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 122 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEY 122 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEcC
Confidence 489999999999999986 5788999988543211 1223457889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 123 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-- 195 (350)
T 1rdq_E 123 VAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-- 195 (350)
T ss_dssp CTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCc--
Confidence 99999999998644 489999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .++.
T Consensus 196 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~~-----------~~p~ 259 (350)
T 1rdq_E 196 ---WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSGKV-----------RFPS 259 (350)
T ss_dssp ---CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CCCT
T ss_pred ---ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcCCC-----------CCCC
Confidence 122356779999999999999999999999999999999999975432 222222221110 1222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
..+..+.+++.+||+.||++||+ ++||++.
T Consensus 260 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 33466889999999999999998 7887753
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=340.28 Aligned_cols=271 Identities=14% Similarity=0.188 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++ .+++.||+|.+...... +.+.+|++++++++|++++..++++...+. ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv 83 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMV 83 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------CCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEE
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------hHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEEE
Confidence 33458999999999999997 46788999876443322 247889999999998888888777654332 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~ 515 (658)
|||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+ ++++.+||+|||+++..
T Consensus 84 ~e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEcc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9999 8999999975433 599999999999999999999999 99999999999999 78899999999999875
Q ss_pred hhcCCC-----CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC----c-HHHHHHHhhcCC
Q 006178 516 LARSEK-----NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG----N-LVDWAKDYLELP 585 (658)
Q Consensus 516 ~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~----~-~~~~~~~~~~~~ 585 (658)
...... .......++..|+|||.+.+..++.++|||||||++|||+||+.||..... . ...........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence 433221 112233456779999999999999999999999999999999999975321 1 111111111110
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
.... ....+..+.+++.+||+.||++|||+.|+++.|+++...... ....+.+|..+
T Consensus 239 ---~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~--~~~~~~dw~~~ 295 (296)
T 4hgt_A 239 ---IEVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF--SYDYVFDWNML 295 (296)
T ss_dssp ---HHHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC--CTTCCCGGGGC
T ss_pred ---hhhh-------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC--CccCccchhhc
Confidence 0000 011235688999999999999999999999999998753211 23346778765
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=344.09 Aligned_cols=258 Identities=16% Similarity=0.152 Sum_probs=193.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeec-cccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~-~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|+.. ++..+|+|.+.... ........+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 105 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ--YICL 105 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC--eEEE
Confidence 334589999999999999985 56788888875432 1112334567999999999999999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHhh
Q 006178 438 VFDYASNGTLYEHLHYGE--------------------------------------RCQVSWTRRMKIVIGIARGLKYLH 479 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qia~gL~yLH 479 (658)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985210 112467788899999999999999
Q ss_pred hcCCCCeeeccCCCcceeecCCC--CceeccccchhhhhhcCCCC--CCcccccCccccCCccccc--CCCCccccchhh
Q 006178 480 TELGPPFTISELNSSAVYLTEDF--SPKLVDFDSWKTILARSEKN--PGTLGSQGAICILPSSLEA--RHLDVQGNIYAF 553 (658)
Q Consensus 480 ~~~~~~ivHrDlkp~NILl~~~~--~~kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~ 553 (658)
++ +|+||||||+||+++.++ .+||+|||+++.+....... ......++..|+|||.+.+ ..++.++|||||
T Consensus 186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 99 999999999999998776 89999999998654322111 1223345677999999875 678999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 554 GVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 554 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
||++|||+||+.||...... ............. ..+.. ...+..+.+++.+||+.||.+|||+.|+++.
T Consensus 263 G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~---~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDA--DTISQVLNKKLCF---ENPNY----NVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCT---TSGGG----GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHHCCCCCCCCChH--HHHHHHHhccccc---CCccc----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999999999654322 1112221111100 01111 1234568899999999999999999999874
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=353.01 Aligned_cols=269 Identities=16% Similarity=0.182 Sum_probs=208.1
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++.. ++.||+|.+..... ....+.+.+|++++++++||||+++++++.+.+....++|||
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 45899999999999999874 78899998853322 122456789999999999999999999998766546799999
Q ss_pred ecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccccchhhh
Q 006178 441 YASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~ 515 (658)
|+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 9999999999975432 2399999999999999999999999 99999999999999 77788999999999765
Q ss_pred hhcCCCCCCcccccCccccCCccccc--------CCCCccccchhhHHHHHHHHhCCCCCCCCC--CcHHHHHHHhhc-C
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEA--------RHLDVQGNIYAFGVLLLEIISGRPPCCKDK--GNLVDWAKDYLE-L 584 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~--~~~~~~~~~~~~-~ 584 (658)
...... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ....+....... .
T Consensus 167 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 167 EDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp CCGGGS---SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred cCCCcc---ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 432211 12234667999999865 567889999999999999999999996422 122222222221 1
Q ss_pred Cc-cccccc------------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 585 PE-VMSYVV------------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 585 ~~-~~~~~~------------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
+. ...... -+.....+......+.+++.+||+.||++||++.|+++.++++.+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11 110000 01112345778889999999999999999999999999999987653
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=348.71 Aligned_cols=245 Identities=16% Similarity=0.173 Sum_probs=194.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+++ +++.||+|.+...... .....+.+.+|..++..+ +||||+++++++.+.+ ..++||
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~~lv~ 97 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVM 97 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EEEEEE
Confidence 3489999999999999986 5778999988543211 122345678899999987 9999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 98 EYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 9999999999997543 489999999999999999999999 99999999999999999999999999987542211
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .+
T Consensus 173 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~~-----------~~ 237 (345)
T 1xjd_A 173 A--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDNP-----------FY 237 (345)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CC
T ss_pred C--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhCCC-----------CC
Confidence 1 12223456779999999999999999999999999999999999975432 122222111111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQ-ELC 629 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~-evl 629 (658)
+...+..+.+++.+||+.||++||++. ||+
T Consensus 238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 222346688999999999999999997 554
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=338.89 Aligned_cols=262 Identities=14% Similarity=0.119 Sum_probs=195.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++. +++.||+|.+.... .......+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 37 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 113 (309)
T 2h34_A 37 RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL-SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDM 113 (309)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGG-GGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccc-ccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEE
Confidence 34589999999999999986 57788888774332 222334567999999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 114 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 114 RLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp ECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999998543 489999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. ......++..|+|||.+.+..++.++||||||+++|||+||+.||...... .............. ..
T Consensus 189 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~-------~~ 257 (309)
T 2h34_A 189 LT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VMGAHINQAIPRPS-------TV 257 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HHHHHHHSCCCCGG-------GT
T ss_pred cc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HHHHHhccCCCCcc-------cc
Confidence 11 111223456799999999999999999999999999999999999754322 11111111110000 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhccCCCch
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-SMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 641 (658)
+...+..+.+++.+||+.||++|| +++++++.|+........
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 222345688999999999999999 999999999988765443
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=338.72 Aligned_cols=269 Identities=14% Similarity=0.185 Sum_probs=205.1
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++ .+++.||+|.+..... .+++.+|+.++++++|++++..++++...+. ..++|||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e 85 (296)
T 3uzp_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVME 85 (296)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEE
T ss_pred EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEE
Confidence 348999999999999997 4678899998754332 2358899999999999888777776654332 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~ 517 (658)
|+ +++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 8899999974433 599999999999999999999999 99999999999999 4788999999999987543
Q ss_pred cCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC----cH-HHHHHHhhcCCcc
Q 006178 518 RSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG----NL-VDWAKDYLELPEV 587 (658)
Q Consensus 518 ~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~----~~-~~~~~~~~~~~~~ 587 (658)
..... ......++..|+|||.+.+..++.++|||||||++|||+||+.||..... .. ..........+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc--
Confidence 32211 12233456779999999999999999999999999999999999975321 11 11111111110
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
.... ....+..+.+++.+||+.||++|||+.|+++.|+++...... ....+.+|..+
T Consensus 239 -~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~--~~~~~~dw~~~ 295 (296)
T 3uzp_A 239 -IEVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF--SYDYVFDWNML 295 (296)
T ss_dssp -HHHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC--CSSCCCGGGGC
T ss_pred -hHHH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC--ccccccccccc
Confidence 0000 011235688999999999999999999999999998754322 23446778765
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=351.84 Aligned_cols=243 Identities=16% Similarity=0.205 Sum_probs=185.8
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEec--CCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE--SSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~--~~~~~~~lv~ 439 (658)
+.||+|+||.||+|++. +++.||+|++.. ...+.+|++++.++ +||||+++++++.. .+....++||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 68999999999999986 577899998742 13467889887555 89999999998865 1112689999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 516 (658)
||+++|+|.+++.......+++.++..|+.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++...
T Consensus 139 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp ECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999999876555699999999999999999999999 9999999999999997 7899999999987643
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-----HHHHHHHhhcCCcccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-----LVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 591 (658)
... ......++..|+|||++.+..++.++|||||||++|||+||+.||...... ....+.. ... ..
T Consensus 216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---~~~---~~ 286 (400)
T 1nxk_A 216 SHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---GQY---EF 286 (400)
T ss_dssp --------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH---TCC---CC
T ss_pred CCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc---Ccc---cC
Confidence 221 112233466799999999999999999999999999999999999754321 1111111 000 00
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.. ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 287 ~~~~~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 287 PNPEW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CTTTT----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111 1234568899999999999999999999985
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=356.68 Aligned_cols=259 Identities=17% Similarity=0.162 Sum_probs=198.3
Q ss_pred HHHHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC
Q 006178 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (658)
Q Consensus 354 ~l~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 430 (658)
++.....+|. +.||+|+||.||+|++. +++.+|+|.+...... .....+.+.+|+.+++.++|||||++++++.+.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh-hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3333444554 89999999999999987 4678888887542211 111223578999999999999999999999987
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 431 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
+ ..++||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 142 ~--~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 R--YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp S--EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred C--EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 7 889999999999999999754 489999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCC----CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARH----LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
+|+.+...... ......+++.|+|||++.+.. ++.++|||||||++|||+||+.||..... ............
T Consensus 214 ~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~ 290 (410)
T 3v8s_A 214 TCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKIMNHKN 290 (410)
T ss_dssp TCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTHHH
T ss_pred eeEeeccCCcc-cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--hhHHHHHHhccc
Confidence 99765322111 111234567899999998765 88999999999999999999999975432 111111111000
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
...-+... ..+..+.+|+.+||+.+|.+ ||+++||+++
T Consensus 291 ---~~~~p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 ---SLTFPDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---HCCCCTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cccCCCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00011111 12356889999999999988 9999999875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=341.97 Aligned_cols=259 Identities=17% Similarity=0.194 Sum_probs=186.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 83 (317)
T 2pmi_A 9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVFE 83 (317)
T ss_dssp ----------CEEEEEECSSSCCEEEEEEEECCST---TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEEE
T ss_pred EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc---cccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEEE
Confidence 3478999999999999976 578899998854432 122356889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 441 YASNGTLYEHLHYGE----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
|++ |+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 59999886421 23589999999999999999999999 99999999999999999999999999998654
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-ccc-ccc-
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EVM-SYV- 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~-~~~- 591 (658)
..... .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ....+......+ ... ...
T Consensus 160 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCCC--CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCccc--CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 22211 122334677999999876 46899999999999999999999999755432 111111111110 000 000
Q ss_pred ----cCCcCCC-------------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 ----VDPELKH-------------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ----~~~~~~~-------------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000 011234568899999999999999999999864
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-41 Score=343.77 Aligned_cols=245 Identities=15% Similarity=0.134 Sum_probs=187.7
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+...++||+|+||+||+|++. +++.||||++...... ......+..|+..+.++ +||||+++++++.+.+ ..+
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~ 133 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG--PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILY 133 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC--hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEE
Confidence 3444589999999999999987 6889999987543222 22334556677666666 9999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +++|.+++..... .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 134 lv~e~~-~~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEEECC-CCBHHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEEecc-CCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 999999 6799998875433 599999999999999999999999 99999999999999999999999999987653
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... ......++..|+|||++.+ .++.++|||||||++|||++|..|+... ..+.. .. . ......
T Consensus 209 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~-~~-~-~~~~~~----- 272 (311)
T 3p1a_A 209 TAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQ-LR-Q-GYLPPE----- 272 (311)
T ss_dssp ---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHH-HT-T-TCCCHH-----
T ss_pred cCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHH-Hh-c-cCCCcc-----
Confidence 221 1222335677999998875 7999999999999999999997766432 11111 11 0 000000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+...+..+.+++.+||+.||++|||+.|+++
T Consensus 273 --~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 --FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 01123466889999999999999999999986
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=352.45 Aligned_cols=266 Identities=19% Similarity=0.276 Sum_probs=201.2
Q ss_pred hhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...+....
T Consensus 44 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp EEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred eeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 3458999999999999984 35788999987532 22345679999999999999999999999876553367
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTT-SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 999999999999999986533 589999999999999999999999 9999999999999999999999999998865
Q ss_pred hhcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc------cc
Q 006178 516 LARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE------VM 588 (658)
Q Consensus 516 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~------~~ 588 (658)
...... .......++..|+|||.+.+..++.++||||||+++|||+||..|+........ ........ .+
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMIGNDKQGQMIVFHL 272 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH---HHHCTTCCTHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH---HhhccccchhhhHHHH
Confidence 432211 111222334569999999988999999999999999999999999753211111 00000000 00
Q ss_pred -ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 589 -SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 589 -~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
..+........+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0000111112233445678899999999999999999999999998754
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=341.84 Aligned_cols=262 Identities=16% Similarity=0.212 Sum_probs=193.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC--ceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--TRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--~~~l 437 (658)
.+.+.||+|+||.||+|++. +++.||+|.+..... ......+.+.+|++++++++||||+++++++...... ..++
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 34589999999999999974 678899998754322 2334456789999999999999999999998765422 3489
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++...+ .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 94 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999997554 489999999999999999999999 999999999999999999999999999987643
Q ss_pred cCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 518 RSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 518 ~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
...... .....++..|+|||.+.+..++.++|||||||++|||+||+.||......... ..............
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~---- 242 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA--YQHVREDPIPPSAR---- 242 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHCCCCCHHHH----
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHhcCCCCCcccc----
Confidence 322111 11223467799999999999999999999999999999999999754432221 11111111100000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHH-HHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQE-LCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e-vl~~L~~~~~ 637 (658)
....+..+.+++.+||+.||++||++.+ +...+.....
T Consensus 243 ---~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 243 ---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ---STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ---cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 0112356889999999999999996555 4455665543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=335.50 Aligned_cols=244 Identities=20% Similarity=0.247 Sum_probs=194.2
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++.. +..+|+|.+..... ......+.+.+|+.++++++||||+++++++.+.+ ..++||||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 90 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEY 90 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEEec
Confidence 4889999999999999874 56788888754321 12223467899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-- 163 (279)
T 3fdn_A 91 APLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 163 (279)
T ss_dssp CTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCccc--
Confidence 99999999997543 489999999999999999999999 99999999999999999999999999886543221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........... ..+.
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~-----------~~~~ 228 (279)
T 3fdn_A 164 --RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRVEF-----------TFPD 228 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCC-----------CCCT
T ss_pred --ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHHHhCCC-----------CCCC
Confidence 12223456799999999999999999999999999999999999754321 11111111100 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 229 FVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 234567899999999999999999999975
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-41 Score=347.62 Aligned_cols=256 Identities=21% Similarity=0.337 Sum_probs=199.5
Q ss_pred hhcccccCCCCeeEEEEEecC-CCe--EEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPE--IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~--vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++.. +.. +|+|.+.... .....+.+.+|+++++++ +||||+++++++.+.+ ..+
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 102 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLY 102 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEE
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceE
Confidence 345899999999999999764 444 4777764322 122345688999999999 9999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC
Q 006178 437 LVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 502 (658)
+||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997543 23689999999999999999999999 999999999999999999
Q ss_pred CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHh
Q 006178 503 SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 503 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 581 (658)
.+||+|||+++..... ........+..|+|||.+.+..++.++||||||+++|||+| |+.||..... .......
T Consensus 180 ~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~ 254 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKL 254 (327)
T ss_dssp CEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHG
T ss_pred eEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--HHHHHHh
Confidence 9999999998743221 11222334567999999998889999999999999999998 9999965432 2222211
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
... .....+...+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 255 ~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 PQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp GGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred hcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 111 001122234467889999999999999999999999999887643
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=340.74 Aligned_cols=250 Identities=16% Similarity=0.226 Sum_probs=198.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--------
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES-------- 430 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-------- 430 (658)
+...+.||+|+||.||+|++. +++.||+|++.... +.+.+|++++++++||||+++++++...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred cceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 334589999999999999986 68899999885432 2467899999999999999999988541
Q ss_pred ------CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCc
Q 006178 431 ------SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (658)
Q Consensus 431 ------~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 504 (658)
.....++||||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 111579999999999999999765445699999999999999999999999 99999999999999999999
Q ss_pred eeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcC
Q 006178 505 KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 584 (658)
||+|||+++....... .....++..|+|||.+.+..++.++||||||+++|||+||..|+... .........
T Consensus 162 kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~- 233 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRD- 233 (284)
T ss_dssp EECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHT-
T ss_pred EECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhc-
Confidence 9999999876543221 12223566799999999999999999999999999999999986321 111111111
Q ss_pred CcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
... +...+..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 234 ---------~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 234 ---------GII---SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ---------TCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ---------ccc---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 001 11123557899999999999999999999999998876543
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=358.24 Aligned_cols=265 Identities=16% Similarity=0.134 Sum_probs=200.8
Q ss_pred ccHHHHHHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeE
Q 006178 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (658)
Q Consensus 350 ~~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~ 426 (658)
+.++++....++|. +.||+|+||.||+|+.+ +++.||+|++...... .....+.+.+|..++.+++||||++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~-~~~~~~~~~~E~~il~~~~hp~Iv~l~~~ 129 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML-KRGEVSCFREERDVLVNGDRRWITQLHFA 129 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 34445555556665 89999999999999986 6788999988543211 11223458899999999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCcee
Q 006178 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKL 506 (658)
Q Consensus 427 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl 506 (658)
+.+.+ ..|+||||+++|+|.+++.+.+ ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 130 ~~~~~--~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL 203 (412)
T 2vd5_A 130 FQDEN--YLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRL 203 (412)
T ss_dssp EECSS--EEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EeeCC--EEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEE
Confidence 99887 8899999999999999997543 2599999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccc-------cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLE-------ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-------~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~ 579 (658)
+|||+++.+..... .......++..|+|||++. ...++.++|||||||++|||+||+.||...... +...
T Consensus 204 ~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~ 280 (412)
T 2vd5_A 204 ADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYG 280 (412)
T ss_dssp CCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH
T ss_pred eechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 99999976533211 1112234567899999987 356899999999999999999999999754321 1111
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKR---PSMQELCTM 631 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R---Ps~~evl~~ 631 (658)
........ . .....+...+.++.+|+.+||+ +|.+| |+++|++++
T Consensus 281 ~i~~~~~~---~---~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 281 KIVHYKEH---L---SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHTHHHH---C---CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHhcccC---c---CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11110000 0 0011112234678899999999 99998 589988764
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=343.73 Aligned_cols=248 Identities=17% Similarity=0.178 Sum_probs=193.0
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|++. +++.+|+|.+..... ...+|++++.++ +||||+++++++.+.+ ..++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~l 93 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVYV 93 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEEE
Confidence 344589999999999999986 577899998743321 234688889888 7999999999999877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC----CCceeccccchh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKLVDFDSWK 513 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 513 (658)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+.++ +.+||+|||+++
T Consensus 94 v~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 999999999999997654 499999999999999999999999 99999999999998543 349999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCccccccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 592 (658)
........ .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+............ .
T Consensus 169 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~---~ 243 (342)
T 2qr7_A 169 QLRAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL---S 243 (342)
T ss_dssp ECBCTTCC--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC---C
T ss_pred cCcCCCCc--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc---C
Confidence 65432221 1223346779999999888899999999999999999999999975432 2223222222111100 0
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ......+..+.+|+.+||+.||++|||+.|+++.
T Consensus 244 ~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 244 G----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp S----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred c----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1112334668899999999999999999999864
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=345.71 Aligned_cols=248 Identities=18% Similarity=0.145 Sum_probs=196.5
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|+... ++.||+|.+...... .....+.+.+|..++..+ +||||+++++++.+.+ ..++|
T Consensus 23 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv 99 (353)
T 2i0e_A 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFV 99 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEEE
Confidence 345899999999999999875 678899887543211 122345688999999988 8999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999997544 499999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .
T Consensus 175 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~-----------~ 239 (353)
T 2i0e_A 175 GV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHNV-----------A 239 (353)
T ss_dssp TC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------C
T ss_pred Cc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCCC-----------C
Confidence 11 12223456779999999999999999999999999999999999975432 222222221111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
++...+..+.+++.+||+.||++||+ ++||++.
T Consensus 240 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 22234467889999999999999995 4666543
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=347.70 Aligned_cols=253 Identities=19% Similarity=0.161 Sum_probs=193.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-----CCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++. +++.||+|.+... ....+.+..|+.+++++. ||||+++++++...+ ..
T Consensus 39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~--~~ 111 (360)
T 3llt_A 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD--HM 111 (360)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT--EE
T ss_pred EEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC--ee
Confidence 3489999999999999985 6778999987421 223456788999999996 999999999999877 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---------------
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------------- 500 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------------- 500 (658)
++||||+ +++|.+++.......+++.++..++.||+.||+|||++ +|+||||||+|||+++
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcccc
Confidence 9999999 88999999876655699999999999999999999999 9999999999999975
Q ss_pred ----------CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCC
Q 006178 501 ----------DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570 (658)
Q Consensus 501 ----------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~ 570 (658)
++.+||+|||+++...... ....++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 7889999999987643211 1223466799999999999999999999999999999999999754
Q ss_pred CCc-HHHHHHHhhcC-Cc---------ccccccCC-c----CCCC--C---------------HHHHHHHHHHHHHccCC
Q 006178 571 KGN-LVDWAKDYLEL-PE---------VMSYVVDP-E----LKHF--S---------------YDDLKVICEVVNLCVNP 617 (658)
Q Consensus 571 ~~~-~~~~~~~~~~~-~~---------~~~~~~~~-~----~~~~--~---------------~~~~~~~~~li~~cl~~ 617 (658)
... ....+...... +. ......+. . .... . ....+.+.+|+.+||+.
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 342 (360)
T 3llt_A 263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQI 342 (360)
T ss_dssp SHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCS
T ss_pred cHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcC
Confidence 321 11111111100 00 00000000 0 0000 0 00125678999999999
Q ss_pred CCCCCCCHHHHHH
Q 006178 618 DITKRPSMQELCT 630 (658)
Q Consensus 618 dP~~RPs~~evl~ 630 (658)
||++|||+.|+++
T Consensus 343 dP~~Rpta~elL~ 355 (360)
T 3llt_A 343 DPTLRPSPAELLK 355 (360)
T ss_dssp SGGGSCCHHHHTT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999875
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=345.19 Aligned_cols=241 Identities=18% Similarity=0.205 Sum_probs=193.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. +++.||+|.+....... .....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~ 105 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--FFQ 105 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--EEE
Confidence 3489999999999999975 57789999886543111 1112335778999999999999999999998877 789
Q ss_pred EEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 437 LVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 437 lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
+||||+.+| +|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++..
T Consensus 106 lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 106 LVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999999777 9999998654 499999999999999999999999 9999999999999999999999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.... ......++..|+|||.+.+..+ +.++|||||||++|||++|+.||..... ......
T Consensus 181 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~~-- 241 (335)
T 3dls_A 181 ERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAAI-- 241 (335)
T ss_dssp CTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTCC--
T ss_pred CCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhcc--
Confidence 3221 1122335677999999988876 8899999999999999999999954211 000000
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 242 ---~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 242 ---HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111234568899999999999999999999985
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-40 Score=338.07 Aligned_cols=246 Identities=20% Similarity=0.243 Sum_probs=189.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++.++ +||||+++++++.+.+ ..++||||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 92 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFEK 92 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEEc
Confidence 67999999999999975 67899999885432 12345788999999995 7999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+++.....
T Consensus 93 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 93 MRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred CCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999997643 489999999999999999999999 9999999999999998775 999999998765322
Q ss_pred CCC-----CCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-------------H
Q 006178 519 SEK-----NPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-------------V 575 (658)
Q Consensus 519 ~~~-----~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-------------~ 575 (658)
... .......++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... .
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 110 11112235677999999875 568899999999999999999999997543211 1
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSY----DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......... . ..++. ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~i~~~----------~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 248 MLFESIQEG----------K-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHC----------C-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhcc----------C-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111111 0 01111 124568899999999999999999999874
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=330.61 Aligned_cols=258 Identities=18% Similarity=0.228 Sum_probs=199.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc--cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||.||+|+.. +++.+|+|.+...... ......+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVV 84 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEE
Confidence 445689999999999999987 5789999988654322 11223567999999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccch
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSW 512 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla 512 (658)
+||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||++++++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999997543 489999999999999999999999 999999999999999877 7999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
........ .....++..|+|||.+.+..++.++||||||+++|||+||+.||...... ................
T Consensus 160 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~- 233 (283)
T 3bhy_A 160 HKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTNISAVNYDFDEE- 233 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCCCCCHH-
T ss_pred eeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHHhHhcccCCcch-
Confidence 76532211 11223456799999999999999999999999999999999999754321 1111111110000000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRI 636 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 636 (658)
.....+..+.+++.+||+.||++|||+.|+++. ++.+.
T Consensus 234 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 234 ------YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp ------HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ------hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 001123568899999999999999999999973 44443
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=358.26 Aligned_cols=247 Identities=17% Similarity=0.205 Sum_probs=198.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++. +|+.||+|.+...... .....+.+.+|+++++.++||||+++++++.+.+ ..++||
T Consensus 19 ~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~ 95 (476)
T 2y94_A 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVM 95 (476)
T ss_dssp EEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-HTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEE
Confidence 34588999999999999986 6889999988543211 1223457899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999997554 499999999999999999999999 99999999999999999999999999988653221
Q ss_pred CCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
......++..|+|||.+.+..+ +.++|||||||++|||++|+.||...... ........... .
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~~-----------~ 234 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFKKICDGIF-----------Y 234 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHHHHHTTCC-----------C
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcCCc-----------C
Confidence 1122345677999999988776 78999999999999999999999754322 22222111100 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 122233568899999999999999999999973
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=330.06 Aligned_cols=249 Identities=19% Similarity=0.190 Sum_probs=196.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 85 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFD 85 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEEe
Confidence 3488999999999999986 578899998754432 2334467889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~ 517 (658)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++.....
T Consensus 86 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 86 LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999887553 489999999999999999999999 9999999999999986655 99999999876532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........... ....+...
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~---~~~~~~~~ 232 (284)
T 3kk8_A 161 SEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAY---DYPSPEWD 232 (284)
T ss_dssp SCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC---CCCTTTTT
T ss_pred Ccc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhccc---cCCchhhc
Confidence 221 11233466799999999999999999999999999999999999654322 11111111100 01111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 233 ----TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ----TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ----ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 233568899999999999999999999874
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=337.79 Aligned_cols=249 Identities=15% Similarity=0.157 Sum_probs=195.8
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.||+|.+...... ......+.+|+.+++++ +||||+++++++.+.+ ..++||||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e~ 110 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILEY 110 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEEe
Confidence 78999999999999987 5789999988654322 22346789999999999 5799999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 9999999999765555799999999999999999999999 9999999999999997 789999999999865422
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. .....++..|+|||.+.+..++.++|||||||++|||+||+.||........ .......... ... .
T Consensus 188 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~~~~~---~~~----~ 255 (327)
T 3lm5_A 188 CE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--YLNISQVNVD---YSE----E 255 (327)
T ss_dssp ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHTCCC---CCT----T
T ss_pred cc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHHHhcccc---cCc----h
Confidence 21 1122356779999999999999999999999999999999999975443211 1111111000 001 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||++|+++.
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 256 TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 112234568899999999999999999999875
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=341.15 Aligned_cols=254 Identities=19% Similarity=0.199 Sum_probs=197.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|.+..... .....+.+.+|++++++++||||+++++++.+......++|||
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 3488999999999999986 578888888754332 2334567999999999999999999999886533337899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-----eeeccCCCcceeecCCCCceeccccchh
Q 006178 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPP-----FTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 441 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-----ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
|+++|+|.+++... ....+++..+..++.|++.||+|||+. + |+||||||+||++++++.+||+|||+++
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999743 233599999999999999999999998 7 9999999999999999999999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... ......++..|+|||.+.+..++.++||||||+++|||+||+.||...... .........
T Consensus 165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~--------- 231 (279)
T 2w5a_A 165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREG--------- 231 (279)
T ss_dssp HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT---------
T ss_pred eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhc---------
Confidence 6532211 011123456799999999999999999999999999999999999754321 111111111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.+..
T Consensus 232 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 -KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -ccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1111222344678899999999999999999999987654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-40 Score=354.24 Aligned_cols=256 Identities=17% Similarity=0.152 Sum_probs=190.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
+.+.||+|+||.||+|++. +++.||+|++.... ......+++.+|+.++++++||||+++++++..... ...+
T Consensus 66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 3488999999999999976 57889999885432 223345678899999999999999999999975431 2579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++ +|.+.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 144 lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 144 LVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 99999965 67777753 389999999999999999999999 99999999999999999999999999998654
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH--HhhcCC--cc-----
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK--DYLELP--EV----- 587 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~--~~~~~~--~~----- 587 (658)
... ......++..|+|||++.+..|+.++||||+||++|||++|+.||.+.+. ...+.. .....+ +.
T Consensus 216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 216 TSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp -CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTTSC
T ss_pred CCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHcc
Confidence 321 12223456779999999999999999999999999999999999975432 111111 111000 00
Q ss_pred --cc---------------cccCCcCCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 --MS---------------YVVDPELKH----FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 --~~---------------~~~~~~~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ......... ........+.+|+.+||+.||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 000000000 011235678999999999999999999999875
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=351.17 Aligned_cols=262 Identities=17% Similarity=0.210 Sum_probs=187.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|+.+++++. ||||+++++++...+....++|
T Consensus 12 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv 89 (388)
T 3oz6_A 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ--NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89 (388)
T ss_dssp EEEEC-------CEEEEEETTTCCEEEEEEECC--C--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred EEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence 34589999999999999975 678999998854322 2334567889999999996 9999999999986554468999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||++ |+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 90 ~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 90 FDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred ecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 99997 6999999753 589999999999999999999999 9999999999999999999999999999865321
Q ss_pred CC-------------------CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHH
Q 006178 519 SE-------------------KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDW 577 (658)
Q Consensus 519 ~~-------------------~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~ 577 (658)
.. ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 242 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 10 011112345677999999986 67999999999999999999999999754321 1111
Q ss_pred HHHhhcCCcc--ccccc------------------CCcCCCCCH-------------HHHHHHHHHHHHccCCCCCCCCC
Q 006178 578 AKDYLELPEV--MSYVV------------------DPELKHFSY-------------DDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 578 ~~~~~~~~~~--~~~~~------------------~~~~~~~~~-------------~~~~~~~~li~~cl~~dP~~RPs 624 (658)
+......+.. ...+. ......... ..+..+.+|+.+||+.||++|||
T Consensus 243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t 322 (388)
T 3oz6_A 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS 322 (388)
T ss_dssp HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence 1111111100 00000 000000000 22456889999999999999999
Q ss_pred HHHHHHH
Q 006178 625 MQELCTM 631 (658)
Q Consensus 625 ~~evl~~ 631 (658)
++|+++.
T Consensus 323 ~~e~l~H 329 (388)
T 3oz6_A 323 ANDALKH 329 (388)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9999886
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=328.64 Aligned_cols=243 Identities=15% Similarity=0.154 Sum_probs=193.8
Q ss_pred hhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++.. +..+|+|++..... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 84 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLV 84 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEE
Confidence 3445899999999999999875 56788888754322 22457899999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~ 515 (658)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 85 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999999987544 489999999999999999999999 99999999999999 78889999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.... ......++..|+|||.+.+ .++.++||||||+++|||+||+.||...... ...........
T Consensus 160 ~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~--------- 224 (277)
T 3f3z_A 160 KPGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLKIREGTF--------- 224 (277)
T ss_dssp CTTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC---------
T ss_pred cCcc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCC---------
Confidence 3221 1122335667999998865 4999999999999999999999999754322 11111111100
Q ss_pred CCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 596 LKHFSY----DDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 596 ~~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 225 --TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111 12466889999999999999999999986
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=343.75 Aligned_cols=246 Identities=18% Similarity=0.204 Sum_probs=194.5
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~ 135 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEY 135 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEEec
Confidence 478999999999999974 6788999988543322 2334467899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+. |+|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 136 ~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 136 CL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp CS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred CC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 96 68888886433 3599999999999999999999999 9999999999999999999999999998765321
Q ss_pred CCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
....++..|+|||.+. ...++.++|||||||++|||+||+.||...... .......... .+..
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~~~~~~~~-------~~~~-- 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQNE-------SPAL-- 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC-------CCCC--
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhcC-------CCCC--
Confidence 1223567799999984 567999999999999999999999999654321 1111111110 0000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
.+...+..+.+++.+||+.||++|||+.|+++..-
T Consensus 274 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 274 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11123456889999999999999999999987643
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=331.94 Aligned_cols=249 Identities=15% Similarity=0.199 Sum_probs=190.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|+.. ++..+|+|++..... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 98 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS---QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIV 98 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeecccc---chhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEE
Confidence 445689999999999999986 577888888754432 223467899999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchh
Q 006178 439 FDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWK 513 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~ 513 (658)
|||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 9999999999998642 123599999999999999999999999 99999999999999 456789999999997
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... .....++..|+|||.+. ..++.++||||||+++|||++|+.||......... .......... .
T Consensus 176 ~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~--~~~~~~~~~~----~ 245 (285)
T 3is5_A 176 LFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--QKATYKEPNY----A 245 (285)
T ss_dssp C-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHCCCCC----C
T ss_pred ecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH--hhhccCCccc----c
Confidence 6543221 12233566799999875 57899999999999999999999999754422211 1111110000 0
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..... .++.+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VECRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C--CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111 2356789999999999999999999986
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=348.57 Aligned_cols=248 Identities=13% Similarity=0.095 Sum_probs=196.0
Q ss_pred hcccccCCCCeeEEEEE------ecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCC
Q 006178 362 FSNIIGSSPDSLVYKGT------MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSP 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~------~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~ 432 (658)
+.+.||+|+||.||+|. ..+++.||+|++... ...++.+|++++++++ |+||+++++++...+
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~- 140 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN- 140 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS-
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC-
Confidence 34889999999999994 346789999987432 1346778888888886 999999999999887
Q ss_pred CceEEEEEecCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---------
Q 006178 433 FTRMLVFDYASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------- 500 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------- 500 (658)
..++||||+++|+|.+++... ....+++..++.|+.||++||+|||++ +|+||||||+|||++.
T Consensus 141 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 141 -GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp -CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred -CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 779999999999999999742 234699999999999999999999999 9999999999999998
Q ss_pred --CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHH
Q 006178 501 --DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578 (658)
Q Consensus 501 --~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~ 578 (658)
++.+||+|||+|+.+.............++..|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----- 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG----- 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-----
Confidence 8999999999997654222222222334567899999999999999999999999999999999998532110
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhhccCC
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKR-PSMQELCTMLEGRIDT 638 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~~ 638 (658)
........+..+ ..+.+.+++..|++.+|.+| |+++++.+.|++....
T Consensus 292 ----------~~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 292 ----------ECKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ----------EEEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------ceeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 001111122221 23556789999999999999 6889999998887654
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=336.07 Aligned_cols=243 Identities=16% Similarity=0.217 Sum_probs=191.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|++. +++.||+|.+...... .....++.+|+..+.++ +||||+++++++.+.+ ..++|
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~lv 89 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLIQ 89 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT--SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEEE
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEE
Confidence 34489999999999999987 6889999987643322 23456788999999999 9999999999998877 78999
Q ss_pred EEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---------------
Q 006178 439 FDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--------------- 501 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--------------- 501 (658)
|||+++|+|.+++.... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997542 13589999999999999999999999 99999999999999844
Q ss_pred ----CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHH
Q 006178 502 ----FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVD 576 (658)
Q Consensus 502 ----~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~ 576 (658)
..+||+|||.+....... ...++..|+|||.+.+. .+++++|||||||++|||++|.+|+.... .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~-- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--Q-- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--H--
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--H--
Confidence 478999999987653221 12356779999999876 57789999999999999999998764321 1
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.. .. .......+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~-~~----------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHE-IR----------QGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHH-HH----------TTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHH-HH----------cCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111 01 111111222334668899999999999999999998764
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=339.55 Aligned_cols=254 Identities=15% Similarity=0.138 Sum_probs=195.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|.+. ++..+|+|.+............+.+.+|++++++++||||+++++++...+....++||
T Consensus 8 ~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (305)
T 2wtk_C 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVM 87 (305)
T ss_dssp CCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEE
T ss_pred eEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEe
Confidence 34589999999999999985 57789999886543222223456799999999999999999999998654433789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||++++ |.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 88 EYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp ECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred hhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 999875 87877765555799999999999999999999999 99999999999999999999999999987653222
Q ss_pred CCCCCcccccCccccCCcccccCC--CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.........++..|+|||.+.+.. ++.++||||||+++|||+||+.||.... .............
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~~~~~----------- 230 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--IYKLFENIGKGSY----------- 230 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHCCC-----------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHhcCCC-----------
Confidence 222222233567799999987644 4789999999999999999999997543 2222221111100
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1122234568899999999999999999999975
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=338.92 Aligned_cols=259 Identities=19% Similarity=0.190 Sum_probs=194.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 82 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVFE 82 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEEE
Confidence 3488999999999999986 478899998754332 2334567889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887543 489999999999999999999999 999999999999999999999999999876543222
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhcC-----------Ccc
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLEL-----------PEV 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~-----------~~~ 587 (658)
.. ....++..|+|||.+.+ ..++.++||||||+++|||+||+.||........ ......... ...
T Consensus 158 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 YY--DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cc--CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 11 12234567999999876 6789999999999999999999999976542211 111111100 000
Q ss_pred cccccCCcCCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKHF------SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+..... .+..+..+.+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000000 01234568899999999999999999999875
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=332.74 Aligned_cols=248 Identities=19% Similarity=0.232 Sum_probs=179.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLE 91 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEEe
Confidence 3488999999999999974 6788999988543211 1223467899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 92 MCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp CCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred cCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999999998543 3689999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.. ....++..|+|||.+.+..++.++||||||+++|||+||+.||........ . ........ ..+
T Consensus 168 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~----------~~~~~~~~-~~~ 232 (278)
T 3cok_A 168 KH--YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--L----------NKVVLADY-EMP 232 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------------CCSSCC-CCC
T ss_pred cc--eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--H----------HHHhhccc-CCc
Confidence 11 122345679999999998999999999999999999999999965432110 0 00111111 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 2334678899999999999999999998863
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=347.30 Aligned_cols=247 Identities=20% Similarity=0.190 Sum_probs=187.0
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHH-HHhccCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+.+. +..+|+|.+...... .....+.+.+|..+ ++.++||||+++++++.+.+ ..|+||
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~ 118 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVL 118 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEEE
Confidence 45899999999999999874 677888888544322 22233456777776 56789999999999999887 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 119 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 119 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999997544 489999999999999999999999 99999999999999999999999999998643222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... .+
T Consensus 194 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~-----------~~ 258 (373)
T 2r5t_A 194 ST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNKPL-----------QL 258 (373)
T ss_dssp CC--CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHHHHHHSCC-----------CC
T ss_pred Cc--cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhccc-----------CC
Confidence 21 2223456779999999999999999999999999999999999975432 222222222111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++||++.+.++.
T Consensus 259 ~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 259 KPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 12234568899999999999999998644433
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=361.38 Aligned_cols=249 Identities=18% Similarity=0.146 Sum_probs=200.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++. +|+.||+|++...... .......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy 265 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTL 265 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEEc
Confidence 389999999999999986 6889999988543311 1223456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-- 340 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340 (576)
T ss_dssp CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc--
Confidence 9999999999876555699999999999999999999999 99999999999999999999999999997653221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||++.+..++.++|||||||++|||++|+.||..... ............+. .+
T Consensus 341 -~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-----------~~ 408 (576)
T 2acx_A 341 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-----------EY 408 (576)
T ss_dssp -CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-----------CC
T ss_pred -cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc-----------cC
Confidence 11223456779999999998999999999999999999999999976432 12222222111111 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
+...+..+.+|+.+||+.||++|| +++||+++
T Consensus 409 p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 223346688999999999999999 78888754
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=340.96 Aligned_cols=261 Identities=18% Similarity=0.232 Sum_probs=198.2
Q ss_pred hhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--CCCceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~~~l 437 (658)
.+.+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|++++++++||||+++++++... .....++
T Consensus 32 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 32 LFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp EEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred EEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 3458999999999999998 468899999885432 23456789999999999999999999998732 1226799
Q ss_pred EEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 438 VFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
||||+++|+|.+++... ....+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999998752 234699999999999999999999999 9999999999999999999999999987654
Q ss_pred hhcCCCCC-------CcccccCccccCCcccccCC---CCccccchhhHHHHHHHHhCCCCCCC---CCCcHHHHHHHhh
Q 006178 516 LARSEKNP-------GTLGSQGAICILPSSLEARH---LDVQGNIYAFGVLLLEIISGRPPCCK---DKGNLVDWAKDYL 582 (658)
Q Consensus 516 ~~~~~~~~-------~~~~~~~~~~~aPE~~~~~~---~~~ksDVwS~Gvvl~elltG~~p~~~---~~~~~~~~~~~~~ 582 (658)
........ .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.. .............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 21111000 01112356799999987654 68999999999999999999999842 1111111111100
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
.. ..+...+..+.+++.+||+.||.+|||+.|+++.|+.+....+.
T Consensus 265 ---------~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 265 ---------SI----PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ----------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred ---------CC----CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 00 11122346688999999999999999999999999998765544
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=333.40 Aligned_cols=261 Identities=19% Similarity=0.242 Sum_probs=196.8
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|... +++.||+|++..... ......+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 35 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 111 (310)
T 2wqm_A 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVL 111 (310)
T ss_dssp EEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEE
Confidence 34589999999999999974 688999998854322 22344567899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||+++|+|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 999999999998641 234589999999999999999999999 999999999999999999999999999876543
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
..... ....++..|+|||.+.+..++.++||||||+++|||++|+.||.................. ... .
T Consensus 189 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~-----~- 258 (310)
T 2wqm_A 189 KTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPP-----L- 258 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--SCC-----C-
T ss_pred CCccc--cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--CCC-----C-
Confidence 22211 1223456799999999999999999999999999999999999765544443333222110 000 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.....+..+.+++.+||+.||++|||+.||++.|+++...
T Consensus 259 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~ 298 (310)
T 2wqm_A 259 -PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC 298 (310)
T ss_dssp -CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0112345688999999999999999999999999988653
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=342.10 Aligned_cols=266 Identities=18% Similarity=0.258 Sum_probs=197.6
Q ss_pred HHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc--cCCCccceeeEEecCCC--
Q 006178 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLLGYCRESSP-- 432 (658)
Q Consensus 357 ~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~~~-- 432 (658)
...+.+.+.||+|+||.||+|++. ++.||+|++.... ...+.+|.+++... +||||+++++++.+...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc-------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 334455699999999999999986 7899999874321 23455666666655 99999999999987631
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeccCCCcceeecCCCCceec
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+++ .++|+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 2689999999999999999754 4899999999999999999999752 3489999999999999999999999
Q ss_pred cccchhhhhhcCCCCC--CcccccCccccCCcccccCCCCcc------ccchhhHHHHHHHHhC----------CCCCCC
Q 006178 508 DFDSWKTILARSEKNP--GTLGSQGAICILPSSLEARHLDVQ------GNIYAFGVLLLEIISG----------RPPCCK 569 (658)
Q Consensus 508 DFGla~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~k------sDVwS~Gvvl~elltG----------~~p~~~ 569 (658)
|||+++.+........ .....++..|+|||.+.+...+.+ +|||||||++|||+|| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 9999876543222111 112245677999999987776665 9999999999999999 666643
Q ss_pred CC---CcHHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 570 DK---GNLVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 570 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.. ...... ...... ....+.... .+..++..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 265 ~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 265 LVPSDPSYEDM-REIVCI-----KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TSCSSCCHHHH-HHHHTT-----SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hcCCCCchhhh-HHHHhh-----hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 21 111111 111111 001111111 12367788999999999999999999999999999987643
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-40 Score=334.25 Aligned_cols=247 Identities=14% Similarity=0.169 Sum_probs=197.2
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|+||.||+|++.+ ++.+|+|.+.... .......+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 95 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 95 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhh-ccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEEe
Confidence 34899999999999999874 5677777764332 223344567899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 96 LCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999987543 489999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....++..|+|||.+.+..++.++||||||+++|||+||+.||...... +.......... ..+
T Consensus 171 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-----------~~~ 235 (294)
T 2rku_A 171 R--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKKNEY-----------SIP 235 (294)
T ss_dssp C--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCC-----------CCC
T ss_pred c--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhhccC-----------CCc
Confidence 1 12233456799999999989999999999999999999999999654321 11111111100 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2233568899999999999999999999875
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=328.68 Aligned_cols=248 Identities=20% Similarity=0.211 Sum_probs=191.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--CCCceEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~~~lv 438 (658)
+.+.||+|+||.||+|.+. ++..||+|.+..... .....+.+.+|+.++++++||||+++++++... +....++|
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhh--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 3478999999999999986 466788887754332 234456799999999999999999999998653 22257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeec-CCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLT-EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ + |+||||||+||+++ +++.+||+|||++...
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999997543 489999999999999999999998 7 99999999999998 7889999999998653
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
... ......++..|+|||.+. +.++.++||||||+++|||+||+.||...... ........... .....
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~--~~~~~--- 251 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSGV--KPASF--- 251 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTTC--CCGGG---
T ss_pred ccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-HHHHHHHhccC--Ccccc---
Confidence 221 122233566799999876 46999999999999999999999999654332 22222211110 00001
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 252 ----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 252 ----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11122568899999999999999999999863
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=349.53 Aligned_cols=251 Identities=16% Similarity=0.172 Sum_probs=187.0
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.+.||+|+||.||+|.+. +++.||+|.+..+.... .......+.+|++++++++||||+++++++... .
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~ 213 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---D 213 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---E
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---c
Confidence 344589999999999999976 56889999886543111 111223578999999999999999999998654 4
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccc
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDS 511 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl 511 (658)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred eEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccc
Confidence 689999999999999987554 499999999999999999999999 99999999999999754 4599999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPE 586 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~ 586 (658)
++...... ......++..|+|||++.+ ..++.++|||||||++|||+||+.||..... ........... .
T Consensus 289 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~--~ 363 (419)
T 3i6u_A 289 SKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY--N 363 (419)
T ss_dssp TTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC--C
T ss_pred ceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC--C
Confidence 98753221 1122335677999999853 6788999999999999999999999975432 22221111000 0
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... . .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 364 ~~~----~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 FIP----E----VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCH----H----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCc----h----hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000 0 001124668899999999999999999999874
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-40 Score=341.10 Aligned_cols=247 Identities=14% Similarity=0.166 Sum_probs=197.1
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|+||.||++++.+ ++.+|+|.+.... .......+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 121 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 121 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhh-hcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEe
Confidence 34889999999999999875 5677777764332 223345567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 122 ~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 122 LCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp CCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 999999999987543 489999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....++..|+|||.+.+..++.++||||||+++|||+||+.||..... ............ ..+
T Consensus 197 ~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~-----------~~~ 261 (335)
T 2owb_A 197 R--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KETYLRIKKNEY-----------SIP 261 (335)
T ss_dssp C--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTCC-----------CCC
T ss_pred c--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHhcCCC-----------CCC
Confidence 1 1223345679999999999999999999999999999999999965432 111111111100 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2233567899999999999999999999874
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-40 Score=356.11 Aligned_cols=263 Identities=15% Similarity=0.126 Sum_probs=181.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---CCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---~~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++.||+|++.... ......+++.+|++++++++|||||++++++.... ....|
T Consensus 56 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 56 EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp EECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred EEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 34589999999999999976 67889999885332 22334567899999999999999999999985432 12689
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 134 lv~e~~-~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEECCC-SEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEecc-ccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 999998 579999997553 499999999999999999999999 99999999999999999999999999998764
Q ss_pred hcCCCC-------------------------CCcccccCccccCCccc-ccCCCCccccchhhHHHHHHHHh--------
Q 006178 517 ARSEKN-------------------------PGTLGSQGAICILPSSL-EARHLDVQGNIYAFGVLLLEIIS-------- 562 (658)
Q Consensus 517 ~~~~~~-------------------------~~~~~~~~~~~~aPE~~-~~~~~~~ksDVwS~Gvvl~ellt-------- 562 (658)
...... ......++..|+|||++ ....++.++|||||||++|||+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 221110 11122346679999986 45679999999999999999999
Q ss_pred ---CCCCCCCCCC---------------------cHHHHHHHhhcCCcc-----------------cccccCCcCCCCCH
Q 006178 563 ---GRPPCCKDKG---------------------NLVDWAKDYLELPEV-----------------MSYVVDPELKHFSY 601 (658)
Q Consensus 563 ---G~~p~~~~~~---------------------~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ 601 (658)
|+++|.+... +....+......+.. ........+....+
T Consensus 288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (458)
T 3rp9_A 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP 367 (458)
T ss_dssp GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence 5666643221 000000000100000 00000000001112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+|+.+||+.||++|||++|+++.
T Consensus 368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 368 ASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 235678899999999999999999999986
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=334.40 Aligned_cols=246 Identities=16% Similarity=0.201 Sum_probs=196.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. ++..+|+|.+...... .....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 17 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 93 (284)
T 2vgo_A 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLML 93 (284)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEE
Confidence 34589999999999999987 4667888887543211 1223467899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 9999999999997654 489999999999999999999999 9999999999999999999999999988654321
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||.+.+..++.++||||||+++|||++|+.||...... .......... ..+
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~-----------~~~ 231 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRIVNVD-----------LKF 231 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTC-----------CCC
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHHhccc-----------cCC
Confidence 112223466799999999999999999999999999999999999654321 1111111110 012
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 22334668899999999999999999999863
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=357.58 Aligned_cols=247 Identities=18% Similarity=0.141 Sum_probs=188.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+...... .......+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e 228 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVME 228 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETT--EEEEEEC
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEEEEe
Confidence 3489999999999999976 5788999988543211 1223456789999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+|+......
T Consensus 229 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 229 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp CCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred eCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999997544 48999999999999999999998 7 99999999999999999999999999987543222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||++.+..++.++|||||||++|||+||+.||...... ........... .+
T Consensus 304 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~~-----------~~ 368 (446)
T 4ejn_A 304 AT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI-----------RF 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-----------CC
T ss_pred cc--cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCCC-----------CC
Confidence 11 12234567799999999999999999999999999999999999654322 12121111111 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
+...+..+.+|+.+||+.||++|| +++|+++.
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 223346688999999999999999 99999863
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=344.21 Aligned_cols=272 Identities=20% Similarity=0.266 Sum_probs=193.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHH--HHhccCCCccceeeEEec---CCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD--LARINHENTGKLLGYCRE---SSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~---~~~~~~~ 436 (658)
+.+.||+|+||.||+|+. +++.||+|++.... ...+..|.++ +..++||||+++++++.. .+....+
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 348999999999999987 56899999884322 2234445444 445899999999986542 2222568
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCCeeeccCCCcceeecCCCCceecccc
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------GPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
+||||+++|+|.+++.... .++..+..++.||++||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 89 lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 9999999999999997553 589999999999999999999863 3389999999999999999999999999
Q ss_pred chhhhhhcCC------CCCCcccccCccccCCccccc-------CCCCccccchhhHHHHHHHHhCCCCCCCCCC-----
Q 006178 511 SWKTILARSE------KNPGTLGSQGAICILPSSLEA-------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG----- 572 (658)
Q Consensus 511 la~~~~~~~~------~~~~~~~~~~~~~~aPE~~~~-------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~----- 572 (658)
+++.+..... ........++..|+|||.+.+ ..++.++|||||||++|||+||..||.....
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9986543211 111112335678999999876 4567899999999999999999777643211
Q ss_pred -----------cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 573 -----------NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 573 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
....+ ........ ...... .........+..+.+++.+||+.||++|||+.|+++.|++++.....
T Consensus 246 ~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDM-QVLVSREK-QRPKFP-EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CTTHHHHCSSCCHHHH-HHHHTTSC-CCCCCC-TTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HhhhcccCCCchHHHH-Hhhhcccc-cCCCCC-cccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 00000 00000000 000001 11112334677899999999999999999999999999999987766
Q ss_pred hhhccc
Q 006178 642 VELKAS 647 (658)
Q Consensus 642 ~~~~~~ 647 (658)
...+.+
T Consensus 323 ~~~~~~ 328 (336)
T 3g2f_A 323 NKSVSP 328 (336)
T ss_dssp ------
T ss_pred cccCCC
Confidence 555443
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=342.65 Aligned_cols=260 Identities=16% Similarity=0.155 Sum_probs=191.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
+.+.||+|+||.||+|++. +|+.||+|++.... ......+++.+|++++++++||||+++++++...+. ...+
T Consensus 29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 3478999999999999985 68899999884432 223345678999999999999999999999976531 1459
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +++|.+++... .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 107 lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp EEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 999999 78999999753 489999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-cc------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EV------ 587 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~------ 587 (658)
.. .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ....+......+ ..
T Consensus 180 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 180 SE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp SS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred cc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 21 122234667999999887 67999999999999999999999999754321 111111111000 00
Q ss_pred ----------cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 006178 588 ----------MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGR 635 (658)
Q Consensus 588 ----------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~ 635 (658)
........+.......+..+.+|+.+||+.||++|||+.|+++. +++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 00000111111222345678899999999999999999999985 4443
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=330.62 Aligned_cols=248 Identities=17% Similarity=0.196 Sum_probs=195.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+ ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 84 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLV 84 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEE
Confidence 445589999999999999986 678899998864322 12346889999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~ 515 (658)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 85 MQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp ECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 99999999999987543 489999999999999999999999 99999999999999 78889999999988653
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.. .......++..|+|||.+.+..++.++||||||+++|||+||+.||...... ............ ...
T Consensus 160 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~---~~~-- 228 (304)
T 2jam_A 160 QN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYYE---FES-- 228 (304)
T ss_dssp CC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCCC---CCT--
T ss_pred CC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCC---CCc--
Confidence 21 1112233567799999999999999999999999999999999999654321 111111111000 001
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+..+.+++.+||+.||++|||+.|+++.
T Consensus 229 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 --PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234668899999999999999999999874
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=347.15 Aligned_cols=252 Identities=17% Similarity=0.170 Sum_probs=196.2
Q ss_pred hcccccCCCCeeEEEEEe----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|+. .+++.||+|++............+.+.+|+++++++ +||||+++++++...+ ..+
T Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 135 (355)
T 1vzo_A 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLH 135 (355)
T ss_dssp EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEE
T ss_pred EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eEE
Confidence 458999999999999997 368899999886443221222334577899999999 6999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 136 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999997544 489999999999999999999999 99999999999999999999999999987653
Q ss_pred hcCCCCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCC--CcHHHHHHHhhcCCccccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDK--GNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~ 592 (658)
..... ......++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..............
T Consensus 211 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~------- 282 (355)
T 1vzo_A 211 ADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------- 282 (355)
T ss_dssp GGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-------
T ss_pred cCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC-------
Confidence 22111 1112235677999999985 347899999999999999999999996433 22333322222111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCTML 632 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~L 632 (658)
..++...+..+.+++.+||+.||++|| +++|+++..
T Consensus 283 ----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 112223346688999999999999999 899998764
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=342.02 Aligned_cols=266 Identities=19% Similarity=0.227 Sum_probs=204.2
Q ss_pred HHHHHHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh--ccCCCccceeeEEecC
Q 006178 353 QELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRES 430 (658)
Q Consensus 353 ~~l~~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~ 430 (658)
.+.....+.+.+.||+|+||.||+|++ +++.||+|.+... ..+.+.+|++++.. ++||||+++++++...
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 344444555669999999999999998 4789999987422 23467889999888 6999999999999876
Q ss_pred CC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeeccCCCcceeecC
Q 006178 431 SP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 431 ~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~ 500 (658)
.. ...++||||+++|+|.+++... .+++.++..++.|++.||+||| +. +|+||||||+||+++.
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 42 1579999999999999999754 4899999999999999999999 77 9999999999999999
Q ss_pred CCCceeccccchhhhhhcCCCC--CCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhC---------
Q 006178 501 DFSPKLVDFDSWKTILARSEKN--PGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISG--------- 563 (658)
Q Consensus 501 ~~~~kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG--------- 563 (658)
++.+||+|||+++......... ......++..|+|||.+.+. .++.++|||||||++|||+||
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 9999999999987654322110 11223456779999998765 334789999999999999999
Q ss_pred -CCCCCCCC---CcHHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 564 -RPPCCKDK---GNLVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 564 -~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+.||.... .....+....... ...+.... ...+.+..+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 263 ~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 263 YQLPYYDLVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCccccCcCcccHHHHHHHHHHH------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 77885432 1223332222111 11111111 123667789999999999999999999999999999875
Q ss_pred C
Q 006178 638 T 638 (658)
Q Consensus 638 ~ 638 (658)
.
T Consensus 337 ~ 337 (342)
T 1b6c_B 337 Q 337 (342)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=336.03 Aligned_cols=250 Identities=19% Similarity=0.262 Sum_probs=195.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.||+|+||.||+|++. +|+.||||.+....... .....+.+.+|+.+++++ +||||+++++++.... ..+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 176 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--FMF 176 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--EEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--EEE
Confidence 389999999999999986 68899999886543211 122345688999999999 8999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++..+.
T Consensus 177 lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 177 LVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999997543 499999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCCCCcccccCccccCCccccc------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
... ......++..|+|||++.+ ..++.++|||||||++|||+||+.||...... ..............
T Consensus 252 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~- 325 (365)
T 2y7j_A 252 PGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMIMEGQYQFS- 325 (365)
T ss_dssp TTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCC-
T ss_pred CCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCCCC-
Confidence 321 1122345677999999863 35889999999999999999999999654321 11111111100000
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+... ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 326 --~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 326 --SPEWD----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp --HHHHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --Ccccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00001 123568899999999999999999999863
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=339.70 Aligned_cols=257 Identities=18% Similarity=0.145 Sum_probs=186.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 113 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHLIFE 113 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEEEEe
Confidence 3489999999999999976 677899998754332 2223456789999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-----CCCCceeccccchhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-----EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-----~~~~~kl~DFGla~~~ 515 (658)
|++ |+|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||++ +++.+||+|||+++.+
T Consensus 114 ~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 114 YAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp CCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred cCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 997 59999998654 489999999999999999999999 999999999999994 4556999999999876
Q ss_pred hhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhcCCc--ccccc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLELPE--VMSYV 591 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~--~~~~~ 591 (658)
....... ....++..|+|||.+.+. .++.++|||||||++|||++|+.||........ .........+. .....
T Consensus 188 ~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 188 GIPIRQF--THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp C-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred CCccccc--CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhh
Confidence 4322221 222346679999999874 489999999999999999999999975442211 11111111100 00000
Q ss_pred c--------CCcCCCCC------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 V--------DPELKHFS------YDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ~--------~~~~~~~~------~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
. .+...... ...+..+.+|+.+||+.||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 00001111 113467889999999999999999999986
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=342.51 Aligned_cols=257 Identities=18% Similarity=0.225 Sum_probs=196.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. ++..+|+|.+.... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 111 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICME 111 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEEE
Confidence 3488999999999999987 56788888775432 2334567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 187 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187 (360)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccc
Confidence 999999999997654 4899999999999999999999831 799999999999999999999999999987643321
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc--------------
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE-------------- 586 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-------------- 586 (658)
....++..|+|||.+.+..++.++|||||||++|||+||+.||...................
T Consensus 188 ----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 188 ----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp -------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred ----cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 12234567999999999999999999999999999999999997544322211110000000
Q ss_pred ----------------ccccccCCcCCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 ----------------VMSYVVDPELKHF-SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ----------------~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
............. ....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000000001 11234568899999999999999999999874
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=355.34 Aligned_cols=248 Identities=19% Similarity=0.144 Sum_probs=198.3
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+|++. +|+.||+|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~~ 267 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTIM 267 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEec
Confidence 78999999999999986 5889999988543321 1223457889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 443 SNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 443 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 9999999987543 34699999999999999999999999 999999999999999999999999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .....++..|+|||++.+..++.++|||||||++|||+||+.||..... .............. .
T Consensus 345 ~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~-----------~ 411 (543)
T 3c4z_A 345 K--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-----------T 411 (543)
T ss_dssp C--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-----------C
T ss_pred c--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhccc-----------C
Confidence 1 1122456779999999999999999999999999999999999975432 22222222222111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSM-----QELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~ 630 (658)
++...+..+.+++.+||+.||++||++ +||++
T Consensus 412 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 223344678899999999999999975 56653
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=339.32 Aligned_cols=262 Identities=18% Similarity=0.137 Sum_probs=193.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|++. +++.||+|++...... ......+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 13 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 90 (346)
T 1ua2_A 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLV 90 (346)
T ss_dssp CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEE
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEEE
Confidence 34589999999999999986 5788999988543321 11122346889999999999999999999998877 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++ +|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 91 ~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 91 FDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 999975 8999887543 3589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcC-CcccccccC-
Q 006178 519 SEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLEL-PEVMSYVVD- 593 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~- 593 (658)
... .....++..|+|||.+.+. .++.++|||||||++|||++|.+||...... +.......... .........
T Consensus 166 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred ccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccC
Confidence 222 2223346779999998764 5899999999999999999999998754421 11111111110 000000000
Q ss_pred ------CcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 ------PELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ------~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0001111 2234678999999999999999999999976
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-39 Score=350.87 Aligned_cols=250 Identities=18% Similarity=0.211 Sum_probs=196.1
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++. +++.||+|++...... ......+.+|++++++++||||+++++++.+.. ..++|
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 99 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIV 99 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEEE
Confidence 455689999999999999986 6788999988543321 123467899999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec---CCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||+++.+
T Consensus 100 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999987554 499999999999999999999999 999999999999995 4567999999999765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.... ......+++.|+|||++.+ .++.++||||+||++|||++|+.||...... ............. ..+.
T Consensus 175 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~---~~~~ 245 (486)
T 3mwu_A 175 QQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAF---DLPQ 245 (486)
T ss_dssp CCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCS---CSGG
T ss_pred CCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCC---CCcc
Confidence 3221 1122335677999999875 5999999999999999999999999754321 2222211110000 0011
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 W----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred c----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1234568899999999999999999999985
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=347.25 Aligned_cols=199 Identities=16% Similarity=0.135 Sum_probs=160.0
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++.||+|++.... ......+++.+|++++++++||||+++++++..... ...|
T Consensus 29 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 29 IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred EEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 34589999999999999986 46789999885322 223345678999999999999999999999976531 2689
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+. |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 107 lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9999996 59999998653 499999999999999999999999 99999999999999999999999999998764
Q ss_pred hcCCC--------------------CCCcccccCccccCCccc-ccCCCCccccchhhHHHHHHHHhCCCCC
Q 006178 517 ARSEK--------------------NPGTLGSQGAICILPSSL-EARHLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 517 ~~~~~--------------------~~~~~~~~~~~~~aPE~~-~~~~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
..... .......++..|+|||.+ ....++.++||||+||++|||++|..||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 32211 011233456779999986 5567999999999999999999865444
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=337.43 Aligned_cols=259 Identities=20% Similarity=0.256 Sum_probs=193.6
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++.. ++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 104 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVFE 104 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC--chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEEe
Confidence 34899999999999999864 78899998754332 2344567889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 105 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 105 FVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999988876444 499999999999999999999999 999999999999999999999999999976543222
Q ss_pred CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH--HHHHHhh----------cCCcc
Q 006178 521 KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV--DWAKDYL----------ELPEV 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~--~~~~~~~----------~~~~~ 587 (658)
.. ....++..|+|||.+.+. .++.++|||||||++|||+||+.||........ ....... .....
T Consensus 180 ~~--~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 VY--DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred cc--CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 21 122345679999999875 789999999999999999999999976542211 1110000 00000
Q ss_pred cccccCCcCCC-C-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKH-F-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~-~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+.... . .+..++.+.+|+.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11111111111 1 11235678999999999999999999998864
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=335.91 Aligned_cols=261 Identities=20% Similarity=0.241 Sum_probs=192.2
Q ss_pred hhcccccCCCCeeEEEEEec--CCC--eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK--GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~--~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++ .||+|.+...... .....+.+.+|++++++++||||+++++++.+.. .+
T Consensus 21 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~ 96 (291)
T 1u46_A 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---MK 96 (291)
T ss_dssp EEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---CE
T ss_pred eeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---ce
Confidence 34589999999999999864 233 5788877543221 2334567999999999999999999999998754 58
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999997543 2589999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ............
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~------- 243 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEGER------- 243 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSCCC-------
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHccCCC-------
Confidence 322111 1112223456999999998889999999999999999999 99999754322 222222111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
...+...+..+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 244 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 244 --LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred --CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 01122344678899999999999999999999999998876443
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=342.36 Aligned_cols=258 Identities=18% Similarity=0.199 Sum_probs=190.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|++...... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 80 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFE 80 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEEE
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEec
Confidence 3478999999999999986 6788999988543221 11123557999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ |+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CCS-EEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred ccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 997 599999876543 589999999999999999999999 999999999999999999999999999875432221
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--cccccccC---
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMSYVVD--- 593 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~--- 593 (658)
.. ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ....+......+ ........
T Consensus 156 ~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 156 TY--DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cc--ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 11 12234667999999876 56899999999999999999999999765422 122222221111 11111100
Q ss_pred ------CcCCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 ------PELKH-----FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ------~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.... .....+..+.+|+.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 011234568899999999999999999999874
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=338.31 Aligned_cols=256 Identities=19% Similarity=0.314 Sum_probs=192.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+ .+|+|++...... ....+.+.+|+.++++++||||+++++++.+.+ ..++||||
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~ 110 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN--EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITSL 110 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCC--CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBC
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCC--HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeec
Confidence 45899999999999999864 5899887544322 122345778999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC-
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE- 520 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~- 520 (658)
+++++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++.......
T Consensus 111 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 111 CKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999997643 3589999999999999999999999 999999999999998 67999999999876432111
Q ss_pred --CCCCcccccCccccCCccccc---------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 521 --KNPGTLGSQGAICILPSSLEA---------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 521 --~~~~~~~~~~~~~~aPE~~~~---------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
........++..|+|||.+.. ..++.++||||||+++|||+||+.||.........+ ..... .
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~--~-- 259 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW--QMGTG--M-- 259 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH--HHHTT--C--
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HhccC--C--
Confidence 111222334567999999864 457899999999999999999999997554322221 11111 0
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.+... ....+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 260 ---~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 ---KPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp ---CCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ---CCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 00000 0012245789999999999999999999999999988654
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=332.71 Aligned_cols=245 Identities=21% Similarity=0.281 Sum_probs=196.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 101 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEY 101 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEEe
Confidence 478999999999999975 577899988754332 223567899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.........
T Consensus 102 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp CTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 9999999999743 589999999999999999999999 9999999999999999999999999998765432211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||.+.+..++.++||||||+++|||+||+.||........ ........ .+ ..+.
T Consensus 176 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~-------~~---~~~~ 241 (303)
T 3a7i_A 176 --RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIPKNN-------PP---TLEG 241 (303)
T ss_dssp --BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHSC-------CC---CCCS
T ss_pred --cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--HHHhhcCC-------CC---CCcc
Confidence 1222345679999999999999999999999999999999999965432211 11111100 01 1112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
..+..+.+++.+||+.||++|||+.|+++..
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 2335688999999999999999999999864
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=345.37 Aligned_cols=258 Identities=17% Similarity=0.170 Sum_probs=178.7
Q ss_pred ccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
++||+|+||.||+|++. ++..||+|++..... .+.+.+|++++++++||||+++++++........++|||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSSC------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 68999999999999976 467899998843221 246789999999999999999999996544447899999
Q ss_pred ecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccc
Q 006178 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDF 509 (658)
Q Consensus 441 ~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DF 509 (658)
|+. |+|.+++... ....+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 996 5888887521 122499999999999999999999999 99999999999999 67789999999
Q ss_pred cchhhhhhcCCC-CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc----------HHHH
Q 006178 510 DSWKTILARSEK-NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN----------LVDW 577 (658)
Q Consensus 510 Gla~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~----------~~~~ 577 (658)
|+|+.+...... .......++..|+|||.+.+. .++.++|||||||++|||+||+.||...... ....
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 999876432211 111223456779999999874 5899999999999999999999999654321 1111
Q ss_pred HHHhhcCCc--cccccc-------------CCcCCCCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 578 AKDYLELPE--VMSYVV-------------DPELKHFSY---------DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 578 ~~~~~~~~~--~~~~~~-------------~~~~~~~~~---------~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+......+. ....+. ......... .....+.+|+.+||+.||++|||++|+++.
T Consensus 257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111111100 000000 000000000 013467899999999999999999999985
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=339.86 Aligned_cols=255 Identities=17% Similarity=0.203 Sum_probs=182.3
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecC------CC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRES------SP 432 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~------~~ 432 (658)
.+.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++++. ||||+++++++... ..
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 34589999999999999975 67889999884432 233457889999999995 99999999998421 12
Q ss_pred CceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCCceeccc
Q 006178 433 FTRMLVFDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
...++||||+. |+|.+++... ....+++.+++.++.||+.||+|||++ + |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 25799999995 7999988641 223599999999999999999999998 7 999999999999999999999999
Q ss_pred cchhhhhhcCCCC----------CCcccccCccccCCccc---ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHH
Q 006178 510 DSWKTILARSEKN----------PGTLGSQGAICILPSSL---EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVD 576 (658)
Q Consensus 510 Gla~~~~~~~~~~----------~~~~~~~~~~~~aPE~~---~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~ 576 (658)
|+++......... ......++..|+|||.+ .+..++.++|||||||++|||+||+.||...... .
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~ 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--R 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--H
Confidence 9988654322111 01122345679999998 5677899999999999999999999999643211 1
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
........ + .....+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 261 ~~~~~~~~---------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 261 IVNGKYSI---------P----PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp -----CCC---------C----TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhcCcccC---------C----cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11100000 0 0111123477999999999999999999999999988653
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=329.78 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=192.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..||+|+||.||+|++. ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 101 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQV 101 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEeC
Confidence 48999999999999975 57789999875432 223457899999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchhhhhhcCC
Q 006178 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~ 520 (658)
++++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999997543 33578999999999999999999999 9999999999999997 89999999999876532211
Q ss_pred CCCCcccccCccccCCcccccCC--CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .....++..|+|||.+.+.. ++.++||||||+++|||+||+.||................. .. ..
T Consensus 179 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-------~~---~~ 246 (295)
T 2clq_A 179 C--TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-------VH---PE 246 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC-------CC---CC
T ss_pred c--ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc-------cc---cc
Confidence 1 11223456799999987643 88999999999999999999999965433222211111100 00 11
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222344678899999999999999999999864
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-39 Score=350.42 Aligned_cols=250 Identities=19% Similarity=0.216 Sum_probs=191.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++. ++..+|+|.+...... ......+.+|+.++++++||||+++++++.+.. ..++|
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 114 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLV 114 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEE
Confidence 445589999999999999986 5778999988644322 122457889999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.. +.+||+|||+++..
T Consensus 115 ~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999999887553 489999999999999999999999 99999999999999764 45999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... .....++..|+|||++. ..++.++||||+||++|||++|+.||...... ............ ...+.
T Consensus 190 ~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~---~~~~~ 260 (494)
T 3lij_A 190 ENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGKYT---FDSPE 260 (494)
T ss_dssp BTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC---CCSGG
T ss_pred CCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC---CCchh
Confidence 43221 12233567799999876 57999999999999999999999999754322 222221111110 11111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 261 ~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 WK----NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cc----cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11 223568899999999999999999999854
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-40 Score=354.23 Aligned_cols=272 Identities=13% Similarity=0.148 Sum_probs=201.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.++||+|+||.||+|++. +++.||||.+...... .++.+|+++++.++| +++..+..++.+.+ ..++||
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lvm 82 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLVM 82 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEEE
Confidence 3489999999999999974 6788999976443321 247889999999976 45555555555555 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~ 516 (658)
||+ +++|.+++..... .+++.+++.|+.||+.||+|||++ +|+||||||+|||+ ++++.+||+|||+++.+.
T Consensus 83 e~~-g~sL~~ll~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 8999999975433 599999999999999999999999 99999999999999 688999999999998765
Q ss_pred hcCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCccccc
Q 006178 517 ARSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 517 ~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 590 (658)
...... ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ ....
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--~~~~ 235 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--KVAT 235 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH--HHHS
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc--cccc
Confidence 332211 11233456779999999999999999999999999999999999976432 111111111100 0000
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
... ......+.++.+++.+||+.||++||++.+|++.|+++...... ......+|..+
T Consensus 236 ~~~----~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~--~~~~~~dW~~~ 293 (483)
T 3sv0_A 236 SIE----ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF--QFDYVFDWTIL 293 (483)
T ss_dssp CHH----HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC--CCSSCCHHHHH
T ss_pred cHH----HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC--CccCCcCchhh
Confidence 000 00011235688999999999999999999999999988653211 12234556544
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=332.07 Aligned_cols=247 Identities=16% Similarity=0.240 Sum_probs=192.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++. +++.||+|.+.... ..+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 32 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 103 (314)
T 3com_A 32 DVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVM 103 (314)
T ss_dssp EEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred hhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEe
Confidence 34489999999999999986 47889999875432 1356889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp ECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 9999999999986332 2589999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.||.........+. ...... +.. ..
T Consensus 180 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~-------~~~-~~ 247 (314)
T 3com_A 180 AK--RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM--IPTNPP-------PTF-RK 247 (314)
T ss_dssp SC--BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHHSCC-------CCC-SS
T ss_pred cc--cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HhcCCC-------ccc-CC
Confidence 11 1122345679999999999999999999999999999999999975432211111 111100 000 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 22234668899999999999999999999863
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=345.41 Aligned_cols=255 Identities=15% Similarity=0.169 Sum_probs=187.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---------
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--------- 431 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--------- 431 (658)
+.+.||+|+||.||+|++. +++.||+|++...... ..+|++++++++||||+++++++....
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS--------CCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch--------HHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 3489999999999999974 6889999988543222 237999999999999999999985432
Q ss_pred ---------------------------CCceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 006178 432 ---------------------------PFTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTEL 482 (658)
Q Consensus 432 ---------------------------~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~ 482 (658)
....++||||++ |+|.+.+.. .....+++..+..++.||++||+|||++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 124789999997 588877753 2233699999999999999999999999
Q ss_pred CCCeeeccCCCcceeec-CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHH
Q 006178 483 GPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEI 560 (658)
Q Consensus 483 ~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~el 560 (658)
+|+||||||+|||++ +++.+||+|||+|+.+..... .....++..|+|||.+.+. .++.++||||+||++|||
T Consensus 161 --gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 161 --GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp --TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred --cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 999999999999998 688999999999986533221 1222345679999998875 489999999999999999
Q ss_pred HhCCCCCCCCCCc--HHHHHHHhhcCC--------cccccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCC
Q 006178 561 ISGRPPCCKDKGN--LVDWAKDYLELP--------EVMSYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 561 ltG~~p~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs 624 (658)
++|+.||...... +...+....... .......-+.... ++...+..+.+|+.+||+.||++|||
T Consensus 236 l~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 315 (383)
T 3eb0_A 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315 (383)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 9999999764321 111111110000 0000001111111 12234567889999999999999999
Q ss_pred HHHHHHH
Q 006178 625 MQELCTM 631 (658)
Q Consensus 625 ~~evl~~ 631 (658)
+.|+++.
T Consensus 316 ~~e~l~h 322 (383)
T 3eb0_A 316 PYEAMAH 322 (383)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 9999853
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=338.43 Aligned_cols=264 Identities=17% Similarity=0.210 Sum_probs=194.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC------CC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~ 433 (658)
.+.+.||+|+||.||+|++. +++.||+|++...... ......+.+|++++++++||||+++++++.... ..
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 20 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp EEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred eEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 34589999999999999985 6789999988554322 223456789999999999999999999997643 12
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..++||||+++ +|.+.+..... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEeccCC-CHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 57999999975 88888765433 599999999999999999999999 99999999999999999999999999998
Q ss_pred hhhhcCCC--CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhc-CC-cc
Q 006178 514 TILARSEK--NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLE-LP-EV 587 (658)
Q Consensus 514 ~~~~~~~~--~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~-~~-~~ 587 (658)
.+...... .......++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... ...+..... .+ ..
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 65422211 11122334677999999876 458999999999999999999999997654321 111111111 10 00
Q ss_pred cccccC-----------CcCCCCCHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVD-----------PELKHFSYD-----DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~-----------~~~~~~~~~-----~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... ......... ....+.+|+.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 000000011 13458899999999999999999999985
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=344.84 Aligned_cols=195 Identities=18% Similarity=0.173 Sum_probs=165.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc------cCCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI------NHENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||.||+|++. +++.||||++... ....+.+.+|+++++.+ +|+||+++++++...+
T Consensus 100 ~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp EEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred EEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 34589999999999999976 4778999887432 22345677898888887 5679999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--ceeccccc
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKLVDFDS 511 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl 511 (658)
..++||||+. ++|.+++.......+++..+..|+.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 7899999995 6999999876655699999999999999999999999 9999999999999999887 99999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK 571 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~ 571 (658)
++..... .....++..|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 249 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 249 SCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 8654321 122334667999999999999999999999999999999999997654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=340.57 Aligned_cols=273 Identities=14% Similarity=0.118 Sum_probs=197.3
Q ss_pred cHHHHHHHHhhhc--ccccCCCCeeEEEEEecCCCeEEEEEEeeecccc-------chhhHHHHHHHHHHHHhccCCCcc
Q 006178 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW-------TGYLELYFQREVADLARINHENTG 421 (658)
Q Consensus 351 ~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~H~nIv 421 (658)
...++......|. +.||+|+||.||+|...++..||+|++....... .....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3455666556665 8999999999999999889999999986543221 122336799999999999999999
Q ss_pred ceeeEEecCC---CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 422 KLLGYCRESS---PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 422 ~l~~~~~~~~---~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
++++++...+ ....++||||++ |+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEE
Confidence 9999985432 225799999997 69999887543 3699999999999999999999999 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVD 576 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~ 576 (658)
+.++.+||+|||+++....... .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999975432211 122234566999999877 67999999999999999999999999754321 111
Q ss_pred HHHHhhcCCcc----------cccccCCcCCC--------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 577 WAKDYLELPEV----------MSYVVDPELKH--------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 577 ~~~~~~~~~~~----------~~~~~~~~~~~--------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........+.. ........... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11111111000 00000000100 112234568899999999999999999999975
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=338.19 Aligned_cols=259 Identities=10% Similarity=0.086 Sum_probs=198.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccch-------------hhHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG-------------YLELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
+.+.||+|+||.||+|+. +++.||+|.+......... ...+.+.+|++++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 458999999999999999 8899999998654321110 11167999999999999999999999999
Q ss_pred cCCCCceEEEEEecCCCChhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCC
Q 006178 429 ESSPFTRMLVFDYASNGTLYEH------LHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~ 501 (658)
+.+ ..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ + +|+||||||+||+++.+
T Consensus 114 ~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 114 NYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKN 188 (348)
T ss_dssp SSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTT
T ss_pred eCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCC
Confidence 887 78999999999999999 665435579999999999999999999999 8 99999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-CCCc-cccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-HLDV-QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~-ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~ 579 (658)
+.+||+|||++...... ......++..|+|||.+.+. .++. ++||||||+++|||+||+.||....... ....
T Consensus 189 ~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~ 263 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-ELFN 263 (348)
T ss_dssp SCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-HHHH
T ss_pred CcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHH
Confidence 99999999998765322 11223345679999999887 6766 9999999999999999999997554322 1222
Q ss_pred HhhcCCccccc----ccCCcC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 580 DYLELPEVMSY----VVDPEL----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 580 ~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........... ...+.. .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22111111100 000000 00113345678899999999999999999999873
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=331.98 Aligned_cols=249 Identities=15% Similarity=0.201 Sum_probs=191.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+..+++.+|+|++..... .....+.+.+|++++++++ ||||+++++++.+.+ ..++||
T Consensus 32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~ 107 (313)
T 3cek_A 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVM 107 (313)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEEE
Confidence 3489999999999999998899999998855432 2334567899999999996 599999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||++++ +.+||+|||+++.+....
T Consensus 108 e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 108 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp C-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred e-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 9 45789999998654 589999999999999999999999 9999999999999975 789999999998764332
Q ss_pred CCCCCcccccCccccCCccccc-----------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-----------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
.........++..|+|||.+.+ ..++.++||||||+++|||+||+.||.......... .........
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~- 258 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL-HAIIDPNHE- 258 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-HHHHCTTSC-
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH-HHHHhcccc-
Confidence 2222223345677999999875 478899999999999999999999997544332222 111111000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 259 -----~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 259 -----I---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp -----C---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----c---CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 1111223568899999999999999999999875
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=339.58 Aligned_cols=248 Identities=19% Similarity=0.276 Sum_probs=189.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC----CCceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS----PFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~----~~~~~ 436 (658)
.+.||+|+||.||+|++. +++.||+|.+..... ..+.+.+|+.+++++ +||||+++++++.... ....+
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 489999999999999985 678899998754322 235788999999999 8999999999997632 22689
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 999999999999999865545699999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
..... .....++..|+|||.+. +..++.++|||||||++|||+||+.||.........+ ...... ....
T Consensus 181 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~--~~~~ 254 (326)
T 2x7f_A 181 RTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF--LIPRNP--APRL 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHHSC--CCCC
T ss_pred cCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--HhhcCc--cccC
Confidence 32211 11223456799999987 5678999999999999999999999996543221111 111110 0000
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 255 K-------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp S-------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred C-------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 11223568899999999999999999999874
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=332.44 Aligned_cols=252 Identities=14% Similarity=0.130 Sum_probs=192.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|++. +++.||+|.+... ..+.+.+|++++++++ ||||+++++++.+......++||
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 4489999999999999974 6788999887422 1356889999999996 99999999999875444789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-Cceeccccchhhhhhc
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILAR 518 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~ 518 (658)
||+++++|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 9999999999985 389999999999999999999999 999999999999999776 8999999999765332
Q ss_pred CCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh--hcC-----------
Q 006178 519 SEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--LEL----------- 584 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~~~----------- 584 (658)
.. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.............. ...
T Consensus 185 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 QE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred Cc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 21 122334567999999887 6799999999999999999999999965443222111100 000
Q ss_pred ---CcccccccCC--------cC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 585 ---PEVMSYVVDP--------EL-KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 585 ---~~~~~~~~~~--------~~-~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......... .. .......+..+.+|+.+||+.||++|||++|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000 00 00112235678899999999999999999999873
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-40 Score=335.29 Aligned_cols=258 Identities=19% Similarity=0.254 Sum_probs=179.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..... ....+++.+|+.++++++||||+++++++...+ ..++|||
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 93 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMK 93 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSS--CEEEEEE
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEeh
Confidence 3489999999999999975 678899998744321 123456889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 441 YASNGTLYEHLHY------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 441 ~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|+++|+|.+++.. .....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 1233589999999999999999999999 999999999999999999999999999876
Q ss_pred hhhcCCCC---CCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc-c
Q 006178 515 ILARSEKN---PGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM-S 589 (658)
Q Consensus 515 ~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-~ 589 (658)
........ ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||........... ......... .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~ 249 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQNDPPSLET 249 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHTSSCCCTTC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-HhccCCCcccc
Confidence 54322111 1112234567999999876 5689999999999999999999999976543222111 111111111 1
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...++. .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 GVQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -----C---CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccch---hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111111 111233568899999999999999999999873
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=348.26 Aligned_cols=255 Identities=19% Similarity=0.231 Sum_probs=187.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~~ 436 (658)
..+.||+|+||.||+|++. +++.||||++..... .+.+|++++++++|||||++++++.... ....+
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 3478999999999999986 588999998854322 1347999999999999999999985422 12467
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchh
Q 006178 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWK 513 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~ 513 (658)
+||||+++ +|.+.+.. .....+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999975 77766642 1234699999999999999999999999 99999999999999965 568999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCC-----
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELP----- 585 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~----- 585 (658)
.+..... .....++..|+|||++.+. .++.++|||||||++|||++|+.||..... .+.+.++......
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 6533221 1222346679999998764 799999999999999999999999976542 1222221110000
Q ss_pred ---cccccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 ---EVMSYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 ---~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......-+.... ++...+.++.+|+.+||+.||++|||+.|+++.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0001111111111 112334678999999999999999999999864
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=336.53 Aligned_cols=256 Identities=17% Similarity=0.150 Sum_probs=188.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
+.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+++++++...+. ...+
T Consensus 29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred EeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 3488999999999999976 578899998854322 23345678899999999999999999999976542 2579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||++ |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 107 lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 107 IVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred EEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 9999996 588888863 389999999999999999999999 99999999999999999999999999998653
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc--------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM-------- 588 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-------- 588 (658)
... ......++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+...........
T Consensus 179 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 179 TSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHhh
Confidence 221 11223345679999999999999999999999999999999999975432 111111110000000
Q ss_pred ----------------------ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 ----------------------SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ----------------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+.........+..+.+|+.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000112346779999999999999999999999975
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=350.05 Aligned_cols=250 Identities=19% Similarity=0.210 Sum_probs=192.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc---------chhhHHHHHHHHHHHHhccCCCccceeeEEecCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW---------TGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~---------~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 431 (658)
+.+.||+|+||.||+|++. ++..+|+|.+....... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 3489999999999999986 46789999886433111 0123467899999999999999999999999877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceecc
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVD 508 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~D 508 (658)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|
T Consensus 120 --~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 120 --YFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred --EEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 7899999999999999987544 499999999999999999999999 999999999999998775 699999
Q ss_pred ccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 509 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
||+++.+.... ......+++.|+|||.+. +.++.++||||+||++|||++|+.||...... .............
T Consensus 193 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 193 FGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVEKGKYYF 266 (504)
T ss_dssp CTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC
T ss_pred CCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCC
Confidence 99997653321 112233567799999986 56999999999999999999999999754322 2222211111000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .+... ..+..+.+++.+||+.||.+|||+.|+++.
T Consensus 267 ~---~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 267 D---FNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C---HHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---ccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 00001 123568899999999999999999999864
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=350.93 Aligned_cols=240 Identities=14% Similarity=0.104 Sum_probs=182.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHH---HHHHhccCCCcccee-------eEEecCC
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV---ADLARINHENTGKLL-------GYCRESS 431 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~~~~~~ 431 (658)
.+.||+|+||.||+|++. +++.||||++...... .....+.+.+|+ +++++++|||||+++ +++.+.+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 488999999999999974 6889999998654322 233456799999 555566899999999 6665442
Q ss_pred C----------C-----ceEEEEEecCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccC
Q 006178 432 P----------F-----TRMLVFDYASNGTLYEHLHYGER-----CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL 491 (658)
Q Consensus 432 ~----------~-----~~~lv~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDl 491 (658)
. . ..++||||+ +|+|.+++..... ..+++..+..|+.||+.||+|||++ +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 1 0 268999999 6899999975321 1344688999999999999999999 9999999
Q ss_pred CCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-----------CCCccccchhhHHHHHHH
Q 006178 492 NSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-----------HLDVQGNIYAFGVLLLEI 560 (658)
Q Consensus 492 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----------~~~~ksDVwS~Gvvl~el 560 (658)
||+|||++.++.+||+|||+|+..... .....+ ..|+|||.+.+. .++.++|||||||++|||
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 999999999999999999998753221 111223 779999999887 899999999999999999
Q ss_pred HhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 561 ISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 561 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
+||+.||...... .....+.. .... .+..+.+++.+||+.||++|||+.|+++
T Consensus 307 ltg~~Pf~~~~~~------------~~~~~~~~-~~~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 307 WCADLPITKDAAL------------GGSEWIFR-SCKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHSSCCC------------------CCSGGGGS-SCCC----CCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHCCCCCcccccc------------cchhhhhh-hccC----CCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999643210 11111111 1112 2356889999999999999999999986
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=327.39 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=191.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..... ......+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVME 91 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEEe
Confidence 4588999999999999986 688999998854321 11223457899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 165 (276)
T 2h6d_A 92 YVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 165 (276)
T ss_dssp CCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred ccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc-
Confidence 999999999997554 489999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||.+.+..+ +.++||||||+++|||++|+.||..... ........... ...
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~-----------~~~ 230 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGGV-----------FYI 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-----------CCC
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcCc-----------ccC
Confidence 1112234567999999987765 6899999999999999999999965432 11111111110 011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 22233568899999999999999999999874
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=330.16 Aligned_cols=248 Identities=17% Similarity=0.189 Sum_probs=191.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. ++..+|+|.+..... ...+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 96 (302)
T 2j7t_A 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIE 96 (302)
T ss_dssp EEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEEE
Confidence 3488999999999999987 477888888754322 23467889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred eCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence 9999999999875332 599999999999999999999999 999999999999999999999999998865432221
Q ss_pred CCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
... ...++..|+|||.+. ...++.++||||||+++|||+||+.||...... ........... +
T Consensus 173 ~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~-------~- 240 (302)
T 2j7t_A 173 KRD--SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKSDP-------P- 240 (302)
T ss_dssp C-------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCC-------C-
T ss_pred ccc--cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHHhccCC-------c-
Confidence 111 123456799999983 667899999999999999999999999754321 11111111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001122334668899999999999999999999864
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=329.83 Aligned_cols=249 Identities=14% Similarity=0.138 Sum_probs=181.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++..... .....+.+.++...++.++||||+++++++.+.+ ..++|||
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e 86 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICME 86 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEEE
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEEe
Confidence 3489999999999999985 678899998854322 1222334555555688889999999999999877 7899999
Q ss_pred ecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|++ |+|.+++.. .....+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 997 588887753 12336999999999999999999999853 8999999999999999999999999999765432
Q ss_pred CCCCCCcccccCccccCCccc----ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 519 SEKNPGTLGSQGAICILPSSL----EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~----~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. .....++..|+|||.+ .+..++.++||||||+++|||+||+.||....................
T Consensus 164 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 233 (290)
T 3fme_A 164 VA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ------- 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-------
T ss_pred cc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC-------
Confidence 21 1122345679999996 456789999999999999999999999975444333332222111000
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 011123456889999999999999999999987
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=345.35 Aligned_cols=260 Identities=16% Similarity=0.192 Sum_probs=190.7
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
.+.+.||+|+||.||+|++..+..+|+|++...... ..+|++++++++||||+++++++...+. ...+
T Consensus 43 ~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred EEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 345899999999999999988888999998644322 2369999999999999999999865431 1378
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceeccccchh
Q 006178 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWK 513 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~ 513 (658)
+||||+++ ++.+.+.. .....+++..+..++.||++||+|||++ +|+||||||+|||++ .++.+||+|||+|+
T Consensus 115 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999976 44444331 1233599999999999999999999999 999999999999999 78999999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCC-----
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELP----- 585 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~----- 585 (658)
.+..... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||.+.... +....+......
T Consensus 191 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 191 ILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp ECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 6533221 1222346679999998765 5899999999999999999999999765421 111111110000
Q ss_pred ---cccccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 006178 586 ---EVMSYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGR 635 (658)
Q Consensus 586 ---~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~ 635 (658)
.......-+.... ++...+..+.+|+.+||+.||++|||+.|+++. ++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 0000000011111 112244678999999999999999999999975 4444
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-40 Score=345.68 Aligned_cols=253 Identities=11% Similarity=0.011 Sum_probs=177.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc--cCCCcccee-------eEEecCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLL-------GYCRESS 431 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~-------~~~~~~~ 431 (658)
+.+.||+|+||.||+|++. +++.||+|++...... .....+.+.+|+.+++.+ +||||++++ +++...+
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 3489999999999999976 6788999988654322 234455788886555555 699988755 4443322
Q ss_pred C---------------CceEEEEEecCCCChhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHhhhcCCCCeeecc
Q 006178 432 P---------------FTRMLVFDYASNGTLYEHLHYGERCQVSWTRR------MKIVIGIARGLKYLHTELGPPFTISE 490 (658)
Q Consensus 432 ~---------------~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~~~~ivHrD 490 (658)
. ...++||||++ |+|.+++..... .+++..+ ..++.||++||+|||++ +|+|||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD 219 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH 219 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence 1 13799999998 899999985432 3455666 78889999999999999 999999
Q ss_pred CCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 491 LNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 491 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
|||+|||++.++.+||+|||+|+...... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998653211 12334478999999987 679999999999999999999999997
Q ss_pred CCCCcHHHHHHHhhcCCcccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 569 KDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
........ .... ............ ......+..+.+|+.+||+.||++|||+.|+++
T Consensus 295 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 295 LVTPGIKG----SWKR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp BCCTTCTT----CCCB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CcCccccc----chhh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 54321100 0000 000000000000 111234567889999999999999999999875
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=349.29 Aligned_cols=252 Identities=19% Similarity=0.211 Sum_probs=198.6
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.+.+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 103 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYL 103 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEE
Confidence 3445689999999999999986 6789999988543321 2234567899999999999999999999999877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~ 514 (658)
||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 104 v~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 999999999999997554 499999999999999999999999 99999999999999 4678999999999986
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
+... .......+++.|+|||.+.+ .++.++||||+||++|||++|+.||...... ............. ..+
T Consensus 179 ~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~---~~~ 249 (484)
T 3nyv_A 179 FEAS---KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYTF---ELP 249 (484)
T ss_dssp BCCC---CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC---CSG
T ss_pred cccc---cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCCC---CCc
Confidence 5322 11222345677999999875 6999999999999999999999999754321 1112111111000 001
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QW----KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11 1234568899999999999999999999864
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=365.54 Aligned_cols=255 Identities=18% Similarity=0.252 Sum_probs=198.5
Q ss_pred hhhcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.+.||+|+||.||+|++.. +..+|+|++... ......+.+.+|+.++++++||||+++++++.+ + ..
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~--~~ 465 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N--PV 465 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST---TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SC
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C--ce
Confidence 3445889999999999999753 345777776322 223345679999999999999999999999854 3 46
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 99999999999999997543 3589999999999999999999999 9999999999999999999999999999865
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.... ......+.++..|+|||.+.+..++.++|||||||++|||++ |..||...... .........
T Consensus 542 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~---------- 608 (656)
T 2j0j_A 542 EDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENG---------- 608 (656)
T ss_dssp CC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHT----------
T ss_pred CCCc-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcC----------
Confidence 3222 111223334567999999999999999999999999999997 99999754322 111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 609 ~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 609 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0111223345678899999999999999999999999998764
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=339.11 Aligned_cols=256 Identities=17% Similarity=0.167 Sum_probs=177.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~~ 436 (658)
+.+.||+|+||.||+|.+. +|+.||+|++.... ......+.+.+|++++++++||||+++++++.... ....+
T Consensus 33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 3488999999999999975 57889999875432 22334567889999999999999999999987542 12569
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 111 lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp EEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 999999 68999998752 599999999999999999999999 99999999999999999999999999998653
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--cccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--VMSYVV 592 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~ 592 (658)
.. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.+.... ....+......+. ....+.
T Consensus 184 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 184 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred cc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 22 112234567999999887 67999999999999999999999999754421 1111111111110 000000
Q ss_pred C----------CcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 D----------PELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~----------~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. +.....+ ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000111 1224568899999999999999999999875
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=330.99 Aligned_cols=261 Identities=19% Similarity=0.194 Sum_probs=194.1
Q ss_pred hcccccCCCCeeEEEEEec--CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc---cCCCccceeeEEecC---CCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES---SPF 433 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~---~~~ 433 (658)
+.+.||+|+||.||+|++. +++.||+|++....... .....+.+|+.+++++ +||||+++++++... ...
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 3489999999999999983 57789999886544221 1122466788877777 899999999998721 112
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..++||||++ |+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 6899999997 6999999876555699999999999999999999999 99999999999999999999999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--cccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--VMSY 590 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~~ 590 (658)
....... .....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ....+......+. ....
T Consensus 169 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 169 IYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred cccCCCC---ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence 6532211 11223456799999999999999999999999999999999999754421 1111111111100 0000
Q ss_pred -------cc----CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 -------VV----DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 -------~~----~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ......+....+..+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 000111222345678899999999999999999999964
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=331.13 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=188.7
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc----cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.+.||+|+||.||+|++. +++.||+|.+...... ........+.+|++++++++||||+++++++....
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 88 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-- 88 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS--
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc--
Confidence 3455689999999999999986 4678999987543211 11122345889999999999999999999987653
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceecccc
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFD 510 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFG 510 (658)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred -eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 699999999999999987544 599999999999999999999999 9999999999999987654 9999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCC
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELP 585 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~ 585 (658)
+++...... ......++..|+|||.+. ...++.++|||||||++|||+||+.||..... .+.........
T Consensus 163 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-- 237 (322)
T 2ycf_A 163 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-- 237 (322)
T ss_dssp TCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC--
T ss_pred cceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc--
Confidence 987642110 011223456799999974 46789999999999999999999999965432 22222211100
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 NFIPE--------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCHH--------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCch--------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 00112456889999999999999999999985
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=365.20 Aligned_cols=247 Identities=17% Similarity=0.139 Sum_probs=197.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|++. +++.||+|++..... ......+.+..|..++..+ +||||+++++++.+.+ ..|+|
T Consensus 344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~lV 420 (674)
T 3pfq_A 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFV 420 (674)
T ss_dssp EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEEE
Confidence 34489999999999999986 467799998854321 1122345688999999988 7999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++...+ .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 421 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999998654 499999999999999999999999 9999999999999999999999999999853322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......++..|+|||++.+..|+.++|||||||++|||+||+.||..... .+.......... .
T Consensus 496 ~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~~~-----------~ 560 (674)
T 3pfq_A 496 GV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHNV-----------A 560 (674)
T ss_dssp TC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHSSCC-----------C
T ss_pred Cc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCCC-----------C
Confidence 21 12223456789999999999999999999999999999999999975432 222222222111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSM-----QELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~ 630 (658)
++...+.++.+|+.+||+.||++||++ +||++
T Consensus 561 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 561 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 233345678899999999999999997 66654
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=332.03 Aligned_cols=256 Identities=16% Similarity=0.177 Sum_probs=196.6
Q ss_pred hhhcccccCCCCeeEEEEEe-c-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC------ccceeeEEecCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESS 431 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~ 431 (658)
+.+.+.||+|+||.||+|.+ . +++.||+|.+... ....+.+.+|++++++++|++ ++++++++.+.+
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 34458999999999999997 3 5778899887422 223467889999999997665 999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-----------
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----------- 500 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~----------- 500 (658)
..++||||+ +++|.+++.......+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 91 --~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 --HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp --EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred --cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 789999999 88999999877655799999999999999999999999 9999999999999987
Q ss_pred --------CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC
Q 006178 501 --------DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG 572 (658)
Q Consensus 501 --------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~ 572 (658)
++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999998764321 1122345679999999999999999999999999999999999976543
Q ss_pred cHH-HHHHHhhc-CCcccc------c---------------------ccC--CcCCCCCHHHHHHHHHHHHHccCCCCCC
Q 006178 573 NLV-DWAKDYLE-LPEVMS------Y---------------------VVD--PELKHFSYDDLKVICEVVNLCVNPDITK 621 (658)
Q Consensus 573 ~~~-~~~~~~~~-~~~~~~------~---------------------~~~--~~~~~~~~~~~~~~~~li~~cl~~dP~~ 621 (658)
... ........ .+.... . ... ..........++.+.+++.+||+.||++
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 211 11111111 000000 0 000 0001123455778999999999999999
Q ss_pred CCCHHHHHHH
Q 006178 622 RPSMQELCTM 631 (658)
Q Consensus 622 RPs~~evl~~ 631 (658)
|||+.|+++.
T Consensus 320 Rpt~~ell~h 329 (339)
T 1z57_A 320 RITLREALKH 329 (339)
T ss_dssp SCCHHHHTTS
T ss_pred ccCHHHHhcC
Confidence 9999999864
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=322.82 Aligned_cols=249 Identities=20% Similarity=0.193 Sum_probs=194.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-----cchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCce
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-----WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.||+|+||.||+|++. +++.||+|.+...... ......+.+.+|+++++++. ||||+++++++.+.+ ..
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~ 99 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FF 99 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--eE
Confidence 488999999999999986 5778999988543211 11233467889999999995 999999999998877 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++++|.+++.... .+++..+..++.||+.||+|||++ +++||||||+||+++.++.+||+|||++...
T Consensus 100 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 100 FLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 99999999999999997543 589999999999999999999999 9999999999999999999999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccc------cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLE------ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
.... ......++..|+|||.+. ...++.++||||||+++|||++|+.||...... ............
T Consensus 175 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~-- 247 (298)
T 1phk_A 175 DPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMIMSGNYQ-- 247 (298)
T ss_dssp CTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC--
T ss_pred CCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHHHHHhcCCcc--
Confidence 3221 112233456799999985 456899999999999999999999999654321 111111111000
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...+. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 248 -~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 -FGSPE----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -CCTTT----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -cCccc----ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00111 1223466889999999999999999999986
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=339.32 Aligned_cols=259 Identities=15% Similarity=0.100 Sum_probs=194.5
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--------CCCccceeeEEecC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--------HENTGKLLGYCRES 430 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~~~ 430 (658)
+.+.+.||+|+||.||+|++. +++.||+|++... ....+.+.+|++++++++ |+||+++++++...
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 444589999999999999975 5678889887422 233567889999999995 78899999998732
Q ss_pred --CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC------
Q 006178 431 --SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF------ 502 (658)
Q Consensus 431 --~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~------ 502 (658)
.....++||||+ +++|.+++.......+++..++.|+.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 112689999999 667777776555456999999999999999999999864 899999999999999775
Q ss_pred -------------------------------------------CceeccccchhhhhhcCCCCCCcccccCccccCCccc
Q 006178 503 -------------------------------------------SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL 539 (658)
Q Consensus 503 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~ 539 (658)
.+||+|||+++...... ....++..|+|||.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----TEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----CSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----ccCCCCCcccCChhh
Confidence 79999999987654221 222346779999999
Q ss_pred ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc----HHH---HHHHhhcC-Cc-------ccccccCC----------
Q 006178 540 EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN----LVD---WAKDYLEL-PE-------VMSYVVDP---------- 594 (658)
Q Consensus 540 ~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~----~~~---~~~~~~~~-~~-------~~~~~~~~---------- 594 (658)
.+..++.++|||||||++|||+||+.||...... ... ........ +. ........
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 9999999999999999999999999999754321 111 11111100 00 00000000
Q ss_pred ----------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ----------ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ----------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012356777889999999999999999999999863
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=332.25 Aligned_cols=255 Identities=18% Similarity=0.195 Sum_probs=189.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC----ceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~----~~~ 436 (658)
+.+.||+|+||.||+|++. +++.||+|++.... ......+.+.+|+.++++++||||+++++++...+.. ..+
T Consensus 46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEeEEecCCCeEEEEEEECCCCCEEEEEEecccc--cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 3478999999999999976 57889999875432 2234456789999999999999999999999876521 239
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+. ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 124 lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp EEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 9999996 689888743 389999999999999999999999 99999999999999999999999999998653
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-ccc-cc--
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EVM-SY-- 590 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~-~~-- 590 (658)
... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...........+ ... ..
T Consensus 196 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 196 AEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred cCc-----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence 321 11234567999999887 67999999999999999999999999754321 111111111000 000 00
Q ss_pred ----------ccCCcCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 ----------VVDPELK---HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ----------~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....... ......+..+.+|+.+||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000 0111234678899999999999999999999876
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=334.11 Aligned_cols=262 Identities=16% Similarity=0.155 Sum_probs=181.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC-----CceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP-----FTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-----~~~~ 436 (658)
.+.||+|+||.||+|++. ++..||||++...... ...+.+|++.++.++||||+++++++...+. ...+
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~ 102 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN 102 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTC-----CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEE
Confidence 489999999999999986 5788999988543222 2346678888999999999999999865431 1378
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhh--hcCCCCeeeccCCCcceeecC-CCCceeccccc
Q 006178 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLH--TELGPPFTISELNSSAVYLTE-DFSPKLVDFDS 511 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH--~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl 511 (658)
+||||+++ +|.+.+.. .....+++..+..++.|++.||+||| ++ +|+||||||+|||++. ++.+||+|||+
T Consensus 103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 99999976 65554432 23346899999999999999999999 88 9999999999999997 89999999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCCccc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEVM 588 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~ 588 (658)
++.+..... .....++..|+|||.+.+.. ++.++|||||||++|||+||+.||...... ...............
T Consensus 179 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
T 3e3p_A 179 AKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV 255 (360)
T ss_dssp CBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHH
Confidence 986543221 12223466799999987654 899999999999999999999999764421 111111110000000
Q ss_pred ----------ccccCCc-------CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 006178 589 ----------SYVVDPE-------LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRI 636 (658)
Q Consensus 589 ----------~~~~~~~-------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 636 (658)
....... ........+..+.+|+.+||+.||.+|||+.|+++. ++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 0000000 011122246779999999999999999999999975 44443
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=331.26 Aligned_cols=260 Identities=18% Similarity=0.170 Sum_probs=194.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~l 437 (658)
+.+.||+|+||.||+|++. ++..||+|++.... .....+.+.+|++++++++||||+++++++..... ...++
T Consensus 31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 3489999999999999976 56789999875322 22344678999999999999999999999975431 25799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+. |+|.+++... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 999996 5999998754 489999999999999999999999 999999999999999999999999999986543
Q ss_pred cCCCCC-CcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcc--cccc-
Q 006178 518 RSEKNP-GTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEV--MSYV- 591 (658)
Q Consensus 518 ~~~~~~-~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~--~~~~- 591 (658)
...... .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .....+......+.. ....
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 322111 122345677999998764 4589999999999999999999999975442 111111111111000 0000
Q ss_pred ---------cCCcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 ---------VDPELKHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ---------~~~~~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..... ....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000001 11234568899999999999999999999875
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=318.41 Aligned_cols=252 Identities=18% Similarity=0.208 Sum_probs=195.3
Q ss_pred HHhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 358 ACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 358 ~~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
..+.+.+.||+|+||.||+|+.. +++.||+|.+...... ....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 97 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFY 97 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEE
Confidence 34455689999999999999986 6788999987543322 223567899999999999999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWK 513 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~ 513 (658)
+||||+++++|.+++.... .+++.++..++.|++.||+|||++ +++||||||+||+++.+ +.+||+|||++.
T Consensus 98 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 9999999999999887543 489999999999999999999999 99999999999999754 469999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... .....++..|+|||.+.+ .++.++||||||+++|||++|+.||...... ............. ..
T Consensus 173 ~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~---~~ 243 (287)
T 2wei_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAF---DL 243 (287)
T ss_dssp TBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC---CS
T ss_pred eecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCC---Cc
Confidence 6532211 112234566999998865 5899999999999999999999999754322 2222211111000 00
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+... ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 244 PQWR----TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GGGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhh----hcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1111 223568899999999999999999999873
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=325.00 Aligned_cols=258 Identities=16% Similarity=0.214 Sum_probs=184.8
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----------
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---------- 431 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---------- 431 (658)
.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 4789999999999999874 7889999875432 234567899999999999999999999885321
Q ss_pred --CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceecc
Q 006178 432 --PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVD 508 (658)
Q Consensus 432 --~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~D 508 (658)
....++||||++ |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+||+|
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 126799999997 6999999643 589999999999999999999999 999999999999997 567999999
Q ss_pred ccchhhhhhcCC-CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCC
Q 006178 509 FDSWKTILARSE-KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELP 585 (658)
Q Consensus 509 FGla~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~ 585 (658)
||+++....... ........++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... ...........
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999886542211 111223334667999998865 679999999999999999999999997544211 11111100000
Q ss_pred c---------ccccc----c-CCcC--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 E---------VMSYV----V-DPEL--KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 ~---------~~~~~----~-~~~~--~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ..... . .+.. .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 00000 0 0000 00011234678899999999999999999999874
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=329.67 Aligned_cols=255 Identities=18% Similarity=0.199 Sum_probs=192.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC----ceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~----~~~ 436 (658)
+.+.||+|+||.||+|++. +|+.||+|++.... ......+.+.+|+.++++++||||+++++++...+.. ..+
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 3478999999999999986 57889999885432 2233456789999999999999999999999875421 349
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+. |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 106 lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp EEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 9999996 699888753 389999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE-------- 586 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~-------- 586 (658)
... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...........+.
T Consensus 178 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 178 AEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CCc-----cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 221 12234567999999887 67899999999999999999999999754421 1111111100000
Q ss_pred ---------ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 ---------VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ---------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......+.........+..+.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000001111222233445778999999999999999999999875
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=321.83 Aligned_cols=251 Identities=20% Similarity=0.280 Sum_probs=188.0
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC--------
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS-------- 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-------- 431 (658)
.+.+.||+|+||.||+|+.. +++.||+|.+... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 33489999999999999975 6889999988432 223467899999999999999999999886532
Q ss_pred ---CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 432 ---PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 432 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
....++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 126799999999999999997543 3578999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhcCC------------CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH
Q 006178 509 FDSWKTILARSE------------KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575 (658)
Q Consensus 509 FGla~~~~~~~~------------~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~ 575 (658)
||+++....... ........++..|+|||.+.+. .++.++|||||||++|||++ ||.... ...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-~~~ 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ERV 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-hHH
Confidence 999876532110 0111122345679999998864 78999999999999999998 553211 111
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
............ .. ..++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~----~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 NILKKLRSVSIE----FP---PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHSTTCC----CC---TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHhccccccc----cC---ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111000 11 11233444668899999999999999999999874
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=333.75 Aligned_cols=260 Identities=15% Similarity=0.132 Sum_probs=192.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---CCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---~~~~~l 437 (658)
+.+.||+|+||.||+|++. +++.||+|++.... .......+.+|++++++++||||+++++++.... ....++
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 3488999999999999986 57889999884322 2334557889999999999999999999886541 126799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 92 v~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 92 IQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 999996 6999998753 489999999999999999999999 999999999999999999999999999986542
Q ss_pred cCCCCC--------CcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCcc
Q 006178 518 RSEKNP--------GTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPEV 587 (658)
Q Consensus 518 ~~~~~~--------~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~ 587 (658)
...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ..........+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 211111 111234667999998765 679999999999999999999999997654211 1111111111100
Q ss_pred ---cccccC----------CcCCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 ---MSYVVD----------PELKH-----FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ---~~~~~~----------~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... +.... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 00000 011234678899999999999999999999874
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=340.53 Aligned_cols=246 Identities=15% Similarity=0.151 Sum_probs=184.2
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+ ..++||||+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~~ 91 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-------CDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALELC 91 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG-------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECCC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEecC
Confidence 7899999999987777788999999884321 24578999999987 8999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-------------CCc
Q 006178 443 SNGTLYEHLHYGERCQ-----VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-------------FSP 504 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~-----l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-------------~~~ 504 (658)
. |+|.+++....... .++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 69999998654211 13334678999999999999999 99999999999999754 489
Q ss_pred eeccccchhhhhhcCCCC--CCcccccCccccCCccccc-------CCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH
Q 006178 505 KLVDFDSWKTILARSEKN--PGTLGSQGAICILPSSLEA-------RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL 574 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~-------~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~ 574 (658)
||+|||+++.+....... ......++..|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999998764322111 1112345677999999875 678999999999999999999 999996544333
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.......... . ......+...+.++.+++.+||+.||++|||+.||++
T Consensus 248 ~~i~~~~~~~----~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIFSL----D----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCCCC----C----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCc----c----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 2222211111 0 0011124567788999999999999999999999986
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=331.00 Aligned_cols=246 Identities=15% Similarity=0.226 Sum_probs=168.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHH-HHHHhccCCCccceeeEEecCC--CCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV-ADLARINHENTGKLLGYCRESS--PFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~-~~l~~l~H~nIv~l~~~~~~~~--~~~~~lv~ 439 (658)
+.||+|+||.||+|++. +++.||+|++.... ...+|+ ..++.++||||+++++++.... ....++||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH---------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 57999999999999987 67899999874321 122333 3356669999999999987522 11579999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 516 (658)
||+++|+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++...
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 999999999999876655799999999999999999999999 9999999999999986 4559999999987543
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH-HHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW-AKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 595 (658)
... .....++..|+|||.+.+..++.++||||||+++|||+||+.||.......... ....... .......+.
T Consensus 183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 256 (336)
T 3fhr_A 183 QNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL--GQYGFPNPE 256 (336)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTTT
T ss_pred ccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc--cccccCchh
Confidence 211 122234567999999988889999999999999999999999996543221100 0000000 000000111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+++.+||+.||++|||+.|+++.
T Consensus 257 ----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 ----WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ----STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----hccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 12334668899999999999999999999984
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=330.83 Aligned_cols=196 Identities=22% Similarity=0.190 Sum_probs=162.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CC-----CccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HE-----NTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~~~~~ 434 (658)
+.+.||+|+||.||+|++. +++.||+|++... ....+++.+|+++++.++ |+ +|+++++++...+ .
T Consensus 58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~ 130 (382)
T 2vx3_A 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN--H 130 (382)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT--E
T ss_pred EEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC--c
Confidence 3489999999999999976 5678999987432 123456788999998884 55 4999999998877 8
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec--CCCCceeccccch
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKLVDFDSW 512 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla 512 (658)
.++||||++ |+|.+++.......+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 899999996 5999999876555699999999999999999999952 12899999999999995 4778999999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK 571 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~ 571 (658)
+..... .....++..|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 765322 122334567999999999999999999999999999999999997543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=328.74 Aligned_cols=241 Identities=13% Similarity=0.176 Sum_probs=190.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||.||+|+.. +++.||+|.+....... .....+.+.+|+.++++++ |+||+++++++.+.+ ..
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~ 123 (320)
T 3a99_A 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SF 123 (320)
T ss_dssp EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cE
Confidence 34589999999999999975 67889999886543211 0012235678999999995 599999999999877 78
Q ss_pred EEEEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceeccccchh
Q 006178 436 MLVFDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWK 513 (658)
Q Consensus 436 ~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~ 513 (658)
++||||+.+ ++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++ +++.+||+|||+++
T Consensus 124 ~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 124 VLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 999999976 89999997643 489999999999999999999999 999999999999999 78899999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
...... .....++..|+|||.+.+..+ +.++||||||+++|||+||+.||.... .... ....
T Consensus 199 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~~----~~~~----- 261 (320)
T 3a99_A 199 LLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIR----GQVF----- 261 (320)
T ss_dssp ECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH----CCCC-----
T ss_pred cccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----hhhc----cccc-----
Confidence 653221 112235667999999987776 688999999999999999999995421 1111 0000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 262 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 262 ------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111223568899999999999999999999874
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=325.14 Aligned_cols=256 Identities=13% Similarity=0.143 Sum_probs=193.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC------ccceeeEEecCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESS 431 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~ 431 (658)
+.+.+.||+|+||.||+|+.. ++ ..||+|.+... ....+.+.+|++++++++|++ ++.+++++...+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 344589999999999999975 33 57888887422 233467889999999997766 899999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee-------------
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL------------- 498 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl------------- 498 (658)
..++||||+ ++++.+++.......+++.++..++.||+.||+|||++ +|+||||||+|||+
T Consensus 96 --~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 --HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp --EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred --eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 789999999 66888888766555699999999999999999999999 99999999999999
Q ss_pred ------cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC
Q 006178 499 ------TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG 572 (658)
Q Consensus 499 ------~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~ 572 (658)
+.++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 66789999999998764321 1223356779999999999999999999999999999999999975442
Q ss_pred cH-HHHHHHhhc-CCccc-------ccccCC----------------------cCCCCCHHHHHHHHHHHHHccCCCCCC
Q 006178 573 NL-VDWAKDYLE-LPEVM-------SYVVDP----------------------ELKHFSYDDLKVICEVVNLCVNPDITK 621 (658)
Q Consensus 573 ~~-~~~~~~~~~-~~~~~-------~~~~~~----------------------~~~~~~~~~~~~~~~li~~cl~~dP~~ 621 (658)
.. ...+..... .+... ...... .........+..+.+|+.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 21 111111111 00000 000000 000112344668899999999999999
Q ss_pred CCCHHHHHHH
Q 006178 622 RPSMQELCTM 631 (658)
Q Consensus 622 RPs~~evl~~ 631 (658)
|||+.|+++.
T Consensus 325 Rpt~~e~l~h 334 (355)
T 2eu9_A 325 RITLAEALLH 334 (355)
T ss_dssp SCCHHHHTTS
T ss_pred CcCHHHHhcC
Confidence 9999999853
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=323.72 Aligned_cols=250 Identities=18% Similarity=0.204 Sum_probs=172.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHH-HHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|+||.||+|... +++.||+|++..... .....++.+|+. +++.++||||+++++++.+.+ ..++|||
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e 101 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICME 101 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEe
Confidence 478999999999999986 678899998854322 223345566666 677789999999999999877 7899999
Q ss_pred ecCCCChhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHY---GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+++ +|.+++.. .....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9975 88887752 22346899999999999999999999853 899999999999999999999999999876543
Q ss_pred cCCCCCCcccccCccccCCccc----ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 518 RSEKNPGTLGSQGAICILPSSL----EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
... .....++..|+|||.+ .+..++.++||||||+++|||+||+.||......... .. . ......
T Consensus 179 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~------~-~~~~~~ 247 (327)
T 3aln_A 179 SIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LT------Q-VVKGDP 247 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------C------C-CCCSCC
T ss_pred ccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-HH------H-HhcCCC
Confidence 221 1122345679999998 4567899999999999999999999999653221110 00 0 000001
Q ss_pred CcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.+. ......+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 1111 0112234568899999999999999999999763
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=325.61 Aligned_cols=242 Identities=16% Similarity=0.225 Sum_probs=186.5
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccc--hhhHHHHHHHHHHHHhc----cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT--GYLELYFQREVADLARI----NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~E~~~l~~l----~H~nIv~l~~~~~~~~~ 432 (658)
+.+.+.||+|+||.||+|++. +++.||+|.+........ ......+.+|+.++.++ +||||+++++++.+.+
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~- 111 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE- 111 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----
T ss_pred eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC-
Confidence 445589999999999999975 677899998754332110 01223466799999999 8999999999998877
Q ss_pred CceEEEEEe-cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceecccc
Q 006178 433 FTRMLVFDY-ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFD 510 (658)
Q Consensus 433 ~~~~lv~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFG 510 (658)
..++|||| +.+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ +++.+||+|||
T Consensus 112 -~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 112 -GFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred -eEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 67999999 78999999998644 489999999999999999999999 999999999999999 88999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCC-ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLD-VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~-~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
+++...... .....++..|+|||.+.+..+. .++||||||+++|||++|+.||.... .... ..
T Consensus 186 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~----~~---- 249 (312)
T 2iwi_A 186 SGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----EILE----AE---- 249 (312)
T ss_dssp SCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH----TC----
T ss_pred hhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----HHhh----hc----
Confidence 987653221 1222345679999999877764 59999999999999999999995321 1111 00
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 250 -------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122234568899999999999999999999984
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=319.22 Aligned_cols=249 Identities=17% Similarity=0.192 Sum_probs=174.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..... .....+.+..+..+++.++||||+++++++.+.+ ..++|||
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e 104 (318)
T 2dyl_A 29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAME 104 (318)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred ccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEe
Confidence 3478999999999999986 678999998854322 1222334555556788889999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+ ++.+..+.... ...+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred cc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 99 54555554432 2358999999999999999999998 6 89999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 520 EKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
. .....++..|+|||.+. ...++.++|||||||++|||+||+.||.........+........... +
T Consensus 180 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~ 251 (318)
T 2dyl_A 180 A---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-----P 251 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-----C
T ss_pred c---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-----C
Confidence 1 11223456799999984 456889999999999999999999999754433222222111111100 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ...+..+.+++.+||+.||.+|||+.|+++.
T Consensus 252 ~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 252 GH----MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp SS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cc----CCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 1123568899999999999999999999864
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=329.01 Aligned_cols=259 Identities=19% Similarity=0.188 Sum_probs=194.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-----------CCCccceeeEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYC 427 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~ 427 (658)
+.+.+.||+|+||.||+|++. +++.||+|.+... ....+.+.+|+.++++++ ||||+++++++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 344589999999999999975 6788999987422 223456889999999886 89999999998
Q ss_pred ecCCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec------
Q 006178 428 RESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT------ 499 (658)
Q Consensus 428 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~------ 499 (658)
...++ ...++||||+ +++|.+++.......+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 75432 2579999999 889999998765556999999999999999999999953 899999999999995
Q ss_pred CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc------
Q 006178 500 EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN------ 573 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~------ 573 (658)
..+.+||+|||+++...... ....++..|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 34479999999987654321 1223466799999999999999999999999999999999999754311
Q ss_pred --HHHHHHHhhcCC-----------------cccccccC----------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006178 574 --LVDWAKDYLELP-----------------EVMSYVVD----------PELKHFSYDDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 574 --~~~~~~~~~~~~-----------------~~~~~~~~----------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs 624 (658)
+..........+ .....+.. .....++...+..+.+|+.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 111111000000 00000000 0011345677889999999999999999999
Q ss_pred HHHHHHH
Q 006178 625 MQELCTM 631 (658)
Q Consensus 625 ~~evl~~ 631 (658)
+.|+++.
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999874
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=335.08 Aligned_cols=244 Identities=16% Similarity=0.194 Sum_probs=180.7
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||.....+++.||||++...... .+.+|+++++++ +|||||++++++.+.. ..++||||
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~ 99 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-------FADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIEL 99 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-------ECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-------HHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEEC
Confidence 3789999999976555667899999998532211 245799999999 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-----CCCceeccccchhhhh
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla~~~~ 516 (658)
+. |+|.+++..... ...+.++..++.||++||+|||++ +|+||||||+|||++. ...+||+|||+|+.+.
T Consensus 100 ~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 96 699999986543 355556789999999999999999 9999999999999953 2357799999998764
Q ss_pred hcCCC-CCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 517 ARSEK-NPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~-~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
..... .......++..|+|||++. ...++.++|||||||++|||+| |..||........... ... .
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~---~~~-~----- 245 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL---LGA-C----- 245 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH---TTC-C-----
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH---hcc-C-----
Confidence 32211 1122234567799999997 4567889999999999999999 9999864433222111 110 0
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..............+.+|+.+||+.||++|||+.||++
T Consensus 246 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 -SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00111112344566889999999999999999999984
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=311.53 Aligned_cols=230 Identities=14% Similarity=0.082 Sum_probs=180.3
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++.. ++.||+|.+..... ......+.+.+|+.++.+++||||+++++++.+.+ ..|+||
T Consensus 34 ~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 110 (286)
T 3uqc_A 34 RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVA 110 (286)
T ss_dssp EEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEE
Confidence 345889999999999999864 78899998754322 22334567999999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++..+ ....++.+|+.|++.||+|||++ +|+||||||+|||+++++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999643 35667899999999999999999 99999999999999999999998664
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC--
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK-- 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 597 (658)
|++ .++.++|||||||++|||+||+.||....... ..............
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---------~~~~~~~~~~~~~~~~ 225 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRS---------GLAPAERDTAGQPIEP 225 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCC---------CSEECCBCTTSCBCCH
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcch---------hhHHHHHHhccCCCCh
Confidence 222 36889999999999999999999997543210 00000000111100
Q ss_pred -CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 598 -HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 598 -~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
......+..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 226 ~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 226 ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0112344678899999999999999 9999999999987644
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=312.03 Aligned_cols=221 Identities=15% Similarity=0.226 Sum_probs=174.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHH-HhccCCCccceeeEEec----CCCCceEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL-ARINHENTGKLLGYCRE----SSPFTRML 437 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~~~~l 437 (658)
+.||+|+||.||+|.+. +++.||+|.+.. ...+.+|+.++ +..+||||+++++++.. .. ..++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~--~~~l 92 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK--CLLI 92 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE--EEEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc--eEEE
Confidence 67999999999999985 678899998732 13467899988 55599999999999876 33 6899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~ 514 (658)
||||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++..
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 99999999999999876655799999999999999999999999 9999999999999998 78899999998754
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. +..++.++|||||||++|||+||+.||........ . ..........
T Consensus 170 ~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~--~~~~~~~~~~ 217 (299)
T 3m2w_A 170 TT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------S--PGMKTRIRMG 217 (299)
T ss_dssp CT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------CCSCCSSCTT
T ss_pred cc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------h--HHHHHHHhhc
Confidence 21 24567899999999999999999999965322100 0 0000111111
Q ss_pred cCCCCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFS----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 218 -~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 218 -QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11122 1235678999999999999999999999974
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=341.85 Aligned_cols=270 Identities=17% Similarity=0.168 Sum_probs=199.9
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC----CCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES----SPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~~~~ 434 (658)
+.+.+.||+|+||.||+|.+. +++.||+|.+... ......+.+.+|++++++++||||+++++++... ....
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 445689999999999999985 5788999987432 1234456799999999999999999999987651 1226
Q ss_pred eEEEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceecccc
Q 006178 435 RMLVFDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFD 510 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFG 510 (658)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998643 23589999999999999999999999 9999999999999997765 8999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCC---cc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP---EV 587 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~---~~ 587 (658)
+++....... .....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...|........ ..
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-PVQWHGKVREKSNEHIV 245 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-HHHSSTTCC------CC
T ss_pred cccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-hhhhhhhhhcccchhhh
Confidence 9986543221 1223456679999999999999999999999999999999999965321 111111100000 00
Q ss_pred ccccc------C---CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHhhccCCC
Q 006178 588 MSYVV------D---PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQE-----LCTMLEGRIDTS 639 (658)
Q Consensus 588 ~~~~~------~---~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~~~~ 639 (658)
..... . +.........+..+.+++.+||+.||++|||+.| ..+.++.+....
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 00000 0 1112234557788999999999999999999987 556666665543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=342.76 Aligned_cols=240 Identities=15% Similarity=0.208 Sum_probs=186.3
Q ss_pred hhhcccccCCCCeeEEEEEec--CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---c
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---T 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~ 434 (658)
+.+.+.||+|+||.||+|++. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+.. .
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 334589999999999999986 57889999874322 223456789999999999999999999999876521 1
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||++ +|+||||||+|||++++ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 6999999999999988754 499999999999999999999999 99999999999999986 899999999876
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.... ....++..|+|||++.+.. +.++|||||||++|||++|..||..... ... ..
T Consensus 231 ~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~~~-~~ 286 (681)
T 2pzi_A 231 INSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------DGL-PE 286 (681)
T ss_dssp TTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------------SSC-CT
T ss_pred cccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------------ccc-cc
Confidence 5322 2223556799999987654 8999999999999999999988753110 000 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhhcc
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPS-MQELCTMLEGRI 636 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~~L~~~~ 636 (658)
.......+..+.+++.+||+.||++||+ ++++.+.|..+.
T Consensus 287 --~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 287 --DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp --TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0011223467889999999999999995 666777666543
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=315.03 Aligned_cols=242 Identities=13% Similarity=0.052 Sum_probs=179.0
Q ss_pred HhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccc----cchhhHHHHHHHHHHHHhcc---------CCCccceee
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARIN---------HENTGKLLG 425 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~---------H~nIv~l~~ 425 (658)
.+.+.+.||+|+||.||+|++ +++.||+|++...... ......+.+.+|+.++++++ |||||++.+
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred cchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 344568999999999999998 6789999998765321 12223467889999999986 555555555
Q ss_pred E-----------------Eec-------------CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 006178 426 Y-----------------CRE-------------SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL 475 (658)
Q Consensus 426 ~-----------------~~~-------------~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL 475 (658)
+ +.+ .+ ..++||||+++|++.+.+.+ ..+++..++.|+.||+.||
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD--QLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTT--CEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccC--eEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 4 332 33 78999999999987777643 2489999999999999999
Q ss_pred HHhh-hcCCCCeeeccCCCcceeecCCC--------------------CceeccccchhhhhhcCCCCCCcccccCcccc
Q 006178 476 KYLH-TELGPPFTISELNSSAVYLTEDF--------------------SPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534 (658)
Q Consensus 476 ~yLH-~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~ 534 (658)
+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...++..|+
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~ 244 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSM 244 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTT
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeeccc
Confidence 9999 88 999999999999999887 8999999999865321 224567799
Q ss_pred CCcccccCCCCccccchhhHHH-HHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc--ccCCcCCCCCHHHHHHHHHHH
Q 006178 535 LPSSLEARHLDVQGNIYAFGVL-LLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY--VVDPELKHFSYDDLKVICEVV 611 (658)
Q Consensus 535 aPE~~~~~~~~~ksDVwS~Gvv-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li 611 (658)
|||.+.+.. +.++||||+|++ .+++++|..||.. ..|....... .... .............+.++.+|+
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDK--MLKQMTFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHH--HHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHh--hhhhhccCcccchhhhhhcCHHHHHHH
Confidence 999998766 899999998777 7889999999832 1121111000 0000 000111112346778899999
Q ss_pred HHccCCCCCCCCCHHHHH
Q 006178 612 NLCVNPDITKRPSMQELC 629 (658)
Q Consensus 612 ~~cl~~dP~~RPs~~evl 629 (658)
.+||+.| |++|++
T Consensus 317 ~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 317 RTMLNFS-----SATDLL 329 (336)
T ss_dssp HHGGGSS-----SHHHHH
T ss_pred HHHhccC-----CHHHHH
Confidence 9999976 898887
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=319.39 Aligned_cols=240 Identities=12% Similarity=0.094 Sum_probs=174.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCcccee---------eE-----
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLL---------GY----- 426 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~---------~~----- 426 (658)
.+.||+|+||.||+|++. +|+.||||++...... .....+.+.+|+.+++.++| +|...+. +.
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 378999999999999965 6889999987533322 22335679999999999977 3221111 11
Q ss_pred -------EecCC---CCceEEEEEecCCCChhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccC
Q 006178 427 -------CRESS---PFTRMLVFDYASNGTLYEHLH-----YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL 491 (658)
Q Consensus 427 -------~~~~~---~~~~~lv~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDl 491 (658)
+.... ....+++|+++ +++|.+++. ......+++..++.++.||++||+|||++ +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 11111 11357777776 679999985 22334588999999999999999999999 9999999
Q ss_pred CCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCccc----------ccCCCCccccchhhHHHHHHHH
Q 006178 492 NSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----------EARHLDVQGNIYAFGVLLLEII 561 (658)
Q Consensus 492 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~----------~~~~~~~ksDVwS~Gvvl~ell 561 (658)
||+|||++.++.+||+|||+++...... ....+ ..|+|||++ ....++.++|||||||++|||+
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~-----~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASA-----VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEE-----CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCcc-----ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999987654331 11122 779999999 5556889999999999999999
Q ss_pred hCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 562 SGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 562 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
||+.||...... .....+.. ..... ++.+.+|+.+||+.||++||++.|+++
T Consensus 312 tg~~Pf~~~~~~------------~~~~~~~~-~~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 312 CADLPNTDDAAL------------GGSEWIFR-SCKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HSSCCCCTTGGG------------SCSGGGGS-SCCCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HCCCCCCCcchh------------hhHHHHHh-hcccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999643211 11111111 11122 356889999999999999999877754
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-30 Score=262.83 Aligned_cols=219 Identities=29% Similarity=0.505 Sum_probs=190.6
Q ss_pred CCchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCC--ccceeecCCC--CCEEEEEecCCCCcc--cCCccccCCCCC
Q 006178 23 AFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYL 96 (658)
Q Consensus 23 ~~~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c~--w~gv~C~~~~--~~v~~l~L~~n~l~g--~~~~~~~~l~~L 96 (658)
.|.+.|+.||++||+++. +|. .+.+|+. +.+||. |.||+|+... ++|+.|+|++|.++| .+|+.++.+++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 367889999999999995 665 6899975 568998 9999998543 799999999999999 999999999999
Q ss_pred cEEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCC
Q 006178 97 QELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (658)
Q Consensus 97 ~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 175 (658)
++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..+.++++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCC
Q 006178 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQN 246 (658)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~ 246 (658)
|+++|.+|..... ....+..++++.|.+++ +..++ |+.|++++|.+++.+|..+..+ ..+++++|.+.+
T Consensus 159 N~l~~~~p~~l~~-l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 159 NRISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp SCCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred CcccCcCCHHHhh-hhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 9999999874332 22367788888888763 44565 9999999999998888776554 456778887764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-30 Score=284.62 Aligned_cols=190 Identities=14% Similarity=0.066 Sum_probs=130.4
Q ss_pred ccccCCCCeeEEEEEe-cCCCeEEEEEEeeecc------ccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEE------HWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~------~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 435 (658)
...+.|++|.+++++. --|+.+++|.+..... .......++|.+|+++|+++ .|+||+++++++++.+ ..
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~ 317 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SG 317 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EE
Confidence 4567788887777653 3578899998864321 11233456799999999999 7999999999999988 88
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
||||||++|++|.++|...+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+..
T Consensus 318 yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999999998654 36654 5899999999999999 9999999999999999999999999999875
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p 566 (658)
..... ......+++.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 43222 1222345677999999875 567889999999999988776554
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=271.41 Aligned_cols=214 Identities=24% Similarity=0.362 Sum_probs=164.2
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeecCCCCCEEEEEecCCCCccc---CC-------------
Q 006178 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGF---LA------------- 87 (658)
Q Consensus 24 ~~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~v~~l~L~~n~l~g~---~~------------- 87 (658)
+.+.|+.||++||+++. ||. .+++|+. +.+||+|.||+|+ .++|+.|+|+++.+.|. +|
T Consensus 9 ~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp CHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred CCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 45789999999999997 777 8999974 5689999999998 68999999999999987 54
Q ss_pred ----------ccccCCCCCcEEeccCCcccccCCc--ccCCCCCCCEEEccCCcCCCCCcccc-cCCcccceeecccccC
Q 006178 88 ----------PELGLLTYLQELILHGNNLIGIIPK--ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGL 154 (658)
Q Consensus 88 ----------~~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l 154 (658)
..++.+++|++|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 4667778888888888888887777 78888888888888888887777765 6788888888888888
Q ss_pred CCCChhh---hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccC
Q 006178 155 TGRLPAE---LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 155 ~g~~p~~---~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~i 227 (658)
++..|.. +.++++|++|++++|++++.+|.. ...++..++++.|.+++ +.++++|++|++++|.+++.+
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~----~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVS----RCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCCBCT----TCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccCCcc----cCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 8777776 677777777877777777666542 22456667777776654 456677777777777777777
Q ss_pred cccCCCCC---CCccCCCccCC
Q 006178 228 PKCLEYLP---STSFQGNCLQN 246 (658)
Q Consensus 228 p~~l~~l~---~~~~~~n~~~~ 246 (658)
|..+..++ .+++++|.+.+
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~ 261 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVG 261 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEE
T ss_pred cHHHhcCCCCCEEECCCCcccC
Confidence 76665443 35566665554
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-26 Score=262.22 Aligned_cols=216 Identities=21% Similarity=0.349 Sum_probs=183.0
Q ss_pred hhHHHHHHHHHHhcccCCCC-------CCCCCCCCCCCCCCc---cceeecCCCCCEEEEEecCCCCcccCCccccCCCC
Q 006178 26 TNEFWALTTFKEAIYEDPHL-------VLSNWNALDADPCHW---TGIACSDARDRVLKINISGSSLKGFLAPELGLLTY 95 (658)
Q Consensus 26 ~~~~~~l~~~k~~~~~~~~~-------~l~~w~~~~~~~c~w---~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~ 95 (658)
..|+.||.++++++..+... ...+|+. +.+||.| .||+|+. .++|+.|+|++++++|.+|++|++|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcC-CCCEEEEEecCcccCCcCChHHhcCcc
Confidence 36899999999998643322 2347985 5789999 9999986 489999999999999999999999999
Q ss_pred CcEEeccCC-----------------------------------------------------------------------
Q 006178 96 LQELILHGN----------------------------------------------------------------------- 104 (658)
Q Consensus 96 L~~L~L~~N----------------------------------------------------------------------- 104 (658)
|++|+|++|
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 999999988
Q ss_pred -------cccccCCcccCCCCCCCEEEccCCcCCCC-----------------Cccccc--CCcccceeecccccCCCCC
Q 006178 105 -------NLIGIIPKELGLLKRLKILDLGTNQLTGP-----------------IPPEIG--NLTGLVKINLQSNGLTGRL 158 (658)
Q Consensus 105 -------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~ 158 (658)
+++| +|.+|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|.+.|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 4456 899999999999999999999986 999999 9999999999999999999
Q ss_pred hhhhcCCCCCCEEeCCCCC-Ccc-cCCCCCCC----CccccccccccCCCCccc------ccCCCCCcEEEccCCcCccc
Q 006178 159 PAELGNLISLEELHLDRNR-LQG-AVPAGSNS----GYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 159 p~~~~~l~~L~~L~L~~N~-l~g-~~p~~~~~----~~~~~l~~~~l~~n~l~~------~~~l~~L~~l~ls~N~l~g~ 226 (658)
|..|+++++|++|+|++|+ ++| .+|..... ....++..+++++|.++. +.++++|+.|++++|.++|.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccc
Confidence 9999999999999999998 998 88864221 012467788888888764 45688999999999999999
Q ss_pred CcccCC---CCCCCccCCCccC
Q 006178 227 IPKCLE---YLPSTSFQGNCLQ 245 (658)
Q Consensus 227 ip~~l~---~l~~~~~~~n~~~ 245 (658)
+| .+. +|..+++++|.+.
T Consensus 346 ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 346 LP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp CC-CCEEEEEESEEECCSSEEE
T ss_pred hh-hhCCCCCCCEEECCCCccc
Confidence 99 664 4556778888766
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-27 Score=259.25 Aligned_cols=187 Identities=11% Similarity=0.065 Sum_probs=144.0
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|+||.||+|.. .+..+++|+...+.... .....+++.+|++++++++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 6899999999999954 46788998876543221 1122456899999999999999996666666555 569999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||+++ .+||+|||+|+......
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 99999999999974 568999999999999999 9999999999999998 99999999998753221
Q ss_pred CCC-----CCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 520 EKN-----PGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 520 ~~~-----~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
... ......++..|||||++.. ..|+..+|+||..+-.++-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 110 0012234667899999987 668889999999999999998887763
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=262.10 Aligned_cols=212 Identities=22% Similarity=0.304 Sum_probs=178.7
Q ss_pred chhHHHHHHHHHHhcccCCCCCCCCCCCCC----CCC--CCc------------cceeecCCCCCEEEEEecCCCCcccC
Q 006178 25 ATNEFWALTTFKEAIYEDPHLVLSNWNALD----ADP--CHW------------TGIACSDARDRVLKINISGSSLKGFL 86 (658)
Q Consensus 25 ~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~C~~~~~~v~~l~L~~n~l~g~~ 86 (658)
...|+.||++||+++. +| +|+..+ .+| |.| .||+|+. .++|+.|+|++++++|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcC
Confidence 3468999999999995 44 786543 456 999 9999986 689999999999999999
Q ss_pred CccccCCCCCcEEec-cCCccccc--------------------------------------------------------
Q 006178 87 APELGLLTYLQELIL-HGNNLIGI-------------------------------------------------------- 109 (658)
Q Consensus 87 ~~~~~~l~~L~~L~L-~~N~l~g~-------------------------------------------------------- 109 (658)
|++|++|++|+.|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 77766555
Q ss_pred --------------------CCcccCCCCCCCEEEccCCcCCC-----------------CCccccc--CCcccceeecc
Q 006178 110 --------------------IPKELGLLKRLKILDLGTNQLTG-----------------PIPPEIG--NLTGLVKINLQ 150 (658)
Q Consensus 110 --------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~Ls 150 (658)
+|..|++|++|++|+|++|+|+| .+|..++ ++++|+.|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88899999999999999999998 3999988 99999999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCC-Ccc-cCCCCCCC-----CccccccccccCCCCccc------ccCCCCCcEEE
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNR-LQG-AVPAGSNS-----GYTANIHGMYASSANLTG------LCHLSQLKVAD 217 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~g-~~p~~~~~-----~~~~~l~~~~l~~n~l~~------~~~l~~L~~l~ 217 (658)
+|.+.|.+|..|++|++|++|+|++|+ ++| .+|..... ....++..+++++|.++. +.++++|+.|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEE
Confidence 999999999999999999999999998 998 78863211 112367778888888754 45678899999
Q ss_pred ccCCcCcccCcccCCCC---CCCccCCCccC
Q 006178 218 FSYNFFVGSIPKCLEYL---PSTSFQGNCLQ 245 (658)
Q Consensus 218 ls~N~l~g~ip~~l~~l---~~~~~~~n~~~ 245 (658)
|++|.++ .+| .+..+ ..+.+++|.+.
T Consensus 580 Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred CCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 9999998 888 66554 45677888766
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=236.67 Aligned_cols=219 Identities=17% Similarity=0.241 Sum_probs=186.1
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCC---CCCCCCCCccceeecC--------CCCCEEEEEecCCCCcccCCccccC
Q 006178 24 FATNEFWALTTFKEAIYEDPHLVLSNWN---ALDADPCHWTGIACSD--------ARDRVLKINISGSSLKGFLAPELGL 92 (658)
Q Consensus 24 ~~~~~~~~l~~~k~~~~~~~~~~l~~w~---~~~~~~c~w~gv~C~~--------~~~~v~~l~L~~n~l~g~~~~~~~~ 92 (658)
+..+|+.||++||+.+..|+.+.+.+|. ....++|.|.|+.|.. ...+|+.|+|++|.++ .+|+.++.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 5568899999999999778877778894 3456899999999952 2468999999999998 68889999
Q ss_pred CCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcC--------
Q 006178 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN-------- 164 (658)
Q Consensus 93 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-------- 164 (658)
+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred -CCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccCcccCCCCC---C
Q 006178 165 -LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSIPKCLEYLP---S 236 (658)
Q Consensus 165 -l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~ip~~l~~l~---~ 236 (658)
+++|++|+|++|+++ .+|.... ...++..+++++|.+++ +..+++|+.|++++|++.+.+|..+..++ .
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~--~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIA--NLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGG--GCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred cCCCCCEEECcCCCcC-cchHhhc--CCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999998 7776422 23577788888888875 45688999999999999999998876654 4
Q ss_pred CccCCCccCCCC
Q 006178 237 TSFQGNCLQNKD 248 (658)
Q Consensus 237 ~~~~~n~~~~~~ 248 (658)
+++++|.+.+..
T Consensus 258 L~L~~n~~~~~~ 269 (328)
T 4fcg_A 258 LILKDCSNLLTL 269 (328)
T ss_dssp EECTTCTTCCBC
T ss_pred EECCCCCchhhc
Confidence 677777655543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-23 Score=211.83 Aligned_cols=133 Identities=11% Similarity=0.089 Sum_probs=107.2
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccc--------------hhhHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT--------------GYLELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~--------------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
.+.||+|+||.||+|++.+|+.||+|.+........ ......+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 389999999999999997789999998854321100 023467899999999999 5 67777654
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
. + ..++||||+++|+|.+ +.. .....++.|++.||+|||+. +|+||||||+|||++ ++.+||+|
T Consensus 172 ~-~--~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-E--GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-E--TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-c--ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEE
Confidence 4 3 4599999999999998 431 22447999999999999999 999999999999999 99999999
Q ss_pred ccchhh
Q 006178 509 FDSWKT 514 (658)
Q Consensus 509 FGla~~ 514 (658)
||+|+.
T Consensus 236 FG~a~~ 241 (282)
T 1zar_A 236 FPQSVE 241 (282)
T ss_dssp CTTCEE
T ss_pred CCCCeE
Confidence 998864
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=189.71 Aligned_cols=174 Identities=22% Similarity=0.239 Sum_probs=108.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+|++|.+++..+..|..+++|++|+|++|.++...+..|.++++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45667777777766555567777777777777777765545555667777777777777765545556667777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcc
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g 225 (658)
+|.+++..|..|.++++|++|+|++|++++ +|..... ...++..+++++|.++. +..+++|+.|++++|.+++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFD-KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTT-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHcc-CCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 777776666666777777777777777763 3332111 12455666666666553 3345667777777777765
Q ss_pred cCcccCC---CCCCCccCCCccCC
Q 006178 226 SIPKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 226 ~ip~~l~---~l~~~~~~~n~~~~ 246 (658)
..+..+. +|..+++.+|.+..
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 196 VPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCHHHhccccCCCEEEecCCCeeC
Confidence 4443343 33445566665544
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=225.48 Aligned_cols=115 Identities=37% Similarity=0.550 Sum_probs=98.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.++|.+|..++.+++|++|+|++|+++|.+|..+.++++|++|+|++|+++|.+|..++.+++|+.|+|
T Consensus 442 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 521 (768)
T 3rgz_A 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEEC
Confidence 46788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
++|+++|.+|..++++++|+.|+|++|+++|.+|.
T Consensus 522 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred CCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 88888888888888888888888888888888775
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.9e-21 Score=184.31 Aligned_cols=176 Identities=20% Similarity=0.241 Sum_probs=144.9
Q ss_pred CCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
.|.|.+|.|+.. ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999742 23689999999999987777789999999999999999987777789999999999999
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~ 207 (658)
|++++..+..+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+... . ...++..+++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~l~~L~~L~l~~N~~~~- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVF-D-RLTSLQYIWLHDNPWDC- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT-T-TCTTCCEEECCSCCBCC-
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHh-c-cCCCccEEEecCCCeec-
Confidence 99997666678999999999999999998777778999999999999999995444221 1 12466777888886653
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l~~ 236 (658)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 -~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 -TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4567888888888888888887776654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=185.28 Aligned_cols=184 Identities=20% Similarity=0.244 Sum_probs=126.5
Q ss_pred CCCCccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc
Q 006178 56 DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (658)
Q Consensus 56 ~~c~w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (658)
+||.|.|.+|.. ..+.++++++.++. +|..+. +.|+.|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 477888888842 23457777777764 454443 567777777777777666677777777777777777776666
Q ss_pred ccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCC
Q 006178 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHL 210 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l 210 (658)
..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+. ... ....+..+++++|.+++ +..+
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSG-VFD-RLTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-TTT-TCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChh-Hhc-cCCcccEEECcCCcCCccCHHHcCcC
Confidence 6677777777777777777766666677777777777777777743332 111 12456666777776654 4467
Q ss_pred CCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCCC
Q 006178 211 SQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNK 247 (658)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~~ 247 (658)
++|+.|+|++|++++..|..+.. |..+++.+|.+...
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88999999999998776666654 45567888877654
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-21 Score=199.19 Aligned_cols=174 Identities=26% Similarity=0.399 Sum_probs=136.7
Q ss_pred CCEEEEEecC-CCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~-n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.+++.|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 4789999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCChhhhcCCC-CCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 149 LQSNGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
|++|.++|.+|..+++++ +|++|+|++|+++|.+|...... .+..++++.|.+++ +..+++|+.|++++|.
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l---~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC---CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC---cccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 999999999999999998 99999999999998888643221 25555566555442 3344555555555555
Q ss_pred CcccCcc--cCCCCCCCccCCCccCC
Q 006178 223 FVGSIPK--CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 223 l~g~ip~--~l~~l~~~~~~~n~~~~ 246 (658)
+++.+|. .+.+|..+++++|.+.+
T Consensus 233 l~~~~~~~~~l~~L~~L~Ls~N~l~~ 258 (313)
T 1ogq_A 233 LAFDLGKVGLSKNLNGLDLRNNRIYG 258 (313)
T ss_dssp ECCBGGGCCCCTTCCEEECCSSCCEE
T ss_pred eeeecCcccccCCCCEEECcCCcccC
Confidence 5544443 12233344455554443
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=176.79 Aligned_cols=153 Identities=27% Similarity=0.335 Sum_probs=117.7
Q ss_pred CCCCCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEE
Q 006178 54 DADPCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124 (658)
Q Consensus 54 ~~~~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 124 (658)
....|+|++|.|+.. ...++.|+|++|.+++..|..|..+++|++|+|++|+|.+..+..|..+++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 357899999999741 24577888888888887777888888888888888888765556678888888888
Q ss_pred ccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|..
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-~~~~------------------- 153 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-IPHG------------------- 153 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCC-CCTT-------------------
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCc-cCHH-------------------
Confidence 8888888665666778888888888888888 678888888888888888888874 3321
Q ss_pred ccccCCCCCcEEEccCCcCcccCc
Q 006178 205 TGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 205 ~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
.+..+++|+.|++++|.+++..+
T Consensus 154 -~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 154 -AFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp -TTTTCTTCCEEECTTSCBCTTBG
T ss_pred -HHhCCCCCCEEEeeCCCccCCcc
Confidence 24456778888888888876544
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-19 Score=178.53 Aligned_cols=177 Identities=22% Similarity=0.206 Sum_probs=151.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc-CCCCCcccccCCccccee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNLTGLVKI 147 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L 147 (658)
...++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3578999999999999888889999999999999999999889999999999999999997 776668889999999999
Q ss_pred ecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
+|++|.+++..|..+.++++|++|+|++|++++..+.... ...++..+++++|.+++ +..+++|+.|++++|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR--DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc--cCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 9999999988888999999999999999999854443221 23577888999998864 5568899999999999
Q ss_pred CcccCcccCCCC---CCCccCCCccCCC
Q 006178 223 FVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 223 l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
+++..|..+..+ ..+++++|.+...
T Consensus 189 l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 216 (285)
T 1ozn_A 189 VAHVHPHAFRDLGRLMTLYLFANNLSAL 216 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred ccccCHhHccCcccccEeeCCCCcCCcC
Confidence 998888877654 5567888877764
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-19 Score=186.32 Aligned_cols=175 Identities=18% Similarity=0.252 Sum_probs=147.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccC---------
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN--------- 140 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------- 140 (658)
.+++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 47889999999999 78999999999999999999999 78999999999999999999998999988765
Q ss_pred CcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcE
Q 006178 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKV 215 (658)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~ 215 (658)
+++|+.|+|++|+++ .+|..++++++|++|+|++|++++ +|... ....++..+++++|++.+ +..+++|+.
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAI--HHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGG--GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhh--ccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999999 889999999999999999999985 55421 223567788888887653 567889999
Q ss_pred EEccCCcCcccCcccCCCC---CCCccCCCccCCCCcc
Q 006178 216 ADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNKDPK 250 (658)
Q Consensus 216 l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~~~~ 250 (658)
|++++|++.+.+|..+.++ ..+++++|.+.+..|.
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH
Confidence 9999999999999876554 4567888877665543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.7e-20 Score=181.60 Aligned_cols=138 Identities=14% Similarity=0.216 Sum_probs=104.4
Q ss_pred hcccccCCCCeeEEEEEe-cCCCe--EEEEEEeeecccc--------------------chhhHHHHHHHHHHHHhccCC
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPE--IAVISLCIKEEHW--------------------TGYLELYFQREVADLARINHE 418 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~--vavk~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~H~ 418 (658)
+.+.||+|+||.||+|.+ .+|+. ||||.+....... .......+.+|+.++.++.|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 347899999999999998 67888 9999864321110 011224688999999999888
Q ss_pred Cc--cceeeEEecCCCCceEEEEEecCC-C----ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeecc
Q 006178 419 NT--GKLLGYCRESSPFTRMLVFDYASN-G----TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH-TELGPPFTISE 490 (658)
Q Consensus 419 nI--v~l~~~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~ivHrD 490 (658)
++ ..++++ + ..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|||
T Consensus 131 ~i~~p~~~~~----~--~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 131 GVSVPQPYTY----M--KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp TCCCCCEEEE----E--TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCCeEEEc----C--CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 64 444432 2 34899999942 4 66665432 234567899999999999999 88 999999
Q ss_pred CCCcceeecCCCCceeccccchhhh
Q 006178 491 LNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 491 lkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 8999999998653
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=5e-19 Score=171.69 Aligned_cols=112 Identities=18% Similarity=0.175 Sum_probs=60.7
Q ss_pred EEEEEecCCCCcccCCc-cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 72 VLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
++.|+|++|.+++..+. .|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 44555555555554332 34555555555555555555555455555555555555555554444445555555555555
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
+|++++..|..|.++++|++|+|++|++++..|
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 555555555555555555555555555554333
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9e-19 Score=169.87 Aligned_cols=147 Identities=19% Similarity=0.247 Sum_probs=126.7
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|..|.|... ...++.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67999999642 246899999999999887778999999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccccc
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~ 208 (658)
+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+. .+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~~ 149 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG---------------------TFS 149 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT---------------------TTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH---------------------HHh
Confidence 99955555578999999999999999988889999999999999999999854432 245
Q ss_pred CCCCCcEEEccCCcCcc
Q 006178 209 HLSQLKVADFSYNFFVG 225 (658)
Q Consensus 209 ~l~~L~~l~ls~N~l~g 225 (658)
.+++|+.|++++|.+..
T Consensus 150 ~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEEeCCCCcCC
Confidence 57889999999999864
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=175.81 Aligned_cols=178 Identities=19% Similarity=0.146 Sum_probs=151.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCc-ccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCccccee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 147 (658)
..+++.|+|++|.+++..|..|..+++|++|+|++|. +....|..|..+++|++|+|++|.+++..|..+.++++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3579999999999999889999999999999999997 777678899999999999999999998888899999999999
Q ss_pred ecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
+|++|.+++..+..|.++++|++|+|++|++++..+... . ...++..+++++|.+++ +..+++|+.|++++|.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAF-R-GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTT-T-TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHh-c-CccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 999999997777779999999999999999995444322 1 13577888999998865 5578899999999999
Q ss_pred CcccCcccCC---CCCCCccCCCccCCCC
Q 006178 223 FVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (658)
Q Consensus 223 l~g~ip~~l~---~l~~~~~~~n~~~~~~ 248 (658)
+++..|..+. +|..+++++|.+...+
T Consensus 213 l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 213 LSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 9986665555 4556788999776643
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=187.19 Aligned_cols=187 Identities=19% Similarity=0.175 Sum_probs=148.3
Q ss_pred ccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcC
Q 006178 60 WTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (658)
Q Consensus 60 w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 130 (658)
|..|.|... ...++.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 567777631 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---c
Q 006178 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---L 207 (658)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~ 207 (658)
++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|++|+..+.+|...... ..++..++++.|.+++ +
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG-LFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CTTCCEEECTTSCCSSCCCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccC-CCCCCEEECCCCcccccccc
Confidence 97666779999999999999999997666788899999999999866555676543322 2466777777777665 3
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
..+++|+.|+|++|.+++..|..+..+ ..+.+++|.+...
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 456677778888887777767665544 3455666655543
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.77 E-value=6e-19 Score=180.43 Aligned_cols=189 Identities=19% Similarity=0.193 Sum_probs=151.7
Q ss_pred CCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEc
Q 006178 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDL 125 (658)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L 125 (658)
.|.|.++.|+.. ...++.|+|++|.++...+..|..+++|++|+|++|.++. ..|..+..+++|++|+|
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 378999999742 2478999999999997555568999999999999999984 34677778999999999
Q ss_pred cCCcCCCCCcccccCCcccceeecccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
++|.++ .+|..+..+++|++|+|++|.+++..+ ..+.++++|++|++++|.+++..|..... ..++..+++++|.+
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l 162 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG--LSSLEVLKMAGNSF 162 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT--CTTCCEEECTTCEE
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc--CcCCCEEECCCCcc
Confidence 999998 678889999999999999999986554 57889999999999999998776653221 24677788888877
Q ss_pred cc------ccCCCCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCCCC
Q 006178 205 TG------LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNKD 248 (658)
Q Consensus 205 ~~------~~~l~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~~~ 248 (658)
++ +..+++|+.|++++|.+++..|..+.. |..+++++|.+....
T Consensus 163 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 163 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred ccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 54 556788999999999998877877654 445678888776643
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=175.19 Aligned_cols=173 Identities=25% Similarity=0.192 Sum_probs=142.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++. +.++.+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..++.+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 35789999999999883 5789999999999999999988888889999999999999999977777789999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
|++|++++..|..++++++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD--KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhc--CCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 999999987777789999999999999999965543211 23577888999998875 45688999999999999
Q ss_pred cccCcccCCCCCCCccCCCccCCCCc
Q 006178 224 VGSIPKCLEYLPSTSFQGNCLQNKDP 249 (658)
Q Consensus 224 ~g~ip~~l~~l~~~~~~~n~~~~~~~ 249 (658)
+|..| ++..+....|.+.+..|
T Consensus 218 ~~~~~----~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 218 DCTCP----GIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CCCTT----TTHHHHHHHHHTGGGBB
T ss_pred cccCc----HHHHHHHHHHhCCCccc
Confidence 87766 34445556666655433
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.8e-18 Score=172.79 Aligned_cols=172 Identities=28% Similarity=0.284 Sum_probs=145.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|++|+|++|+++ .+|..+..+++|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4789999999999998889999999999999999999975443 78999999999999998 78999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----cCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~~l~~L~~l~ls~N~l~ 224 (658)
++|++++..|..|.++++|++|+|++|++++. |..... ...++..+++++|+++.+ ..+++|+.|++++|+++
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTL-PPGLLT-PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCC-CTTTTT-TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCcc-Chhhcc-cccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 99999987778899999999999999999954 443222 235778889999988753 45889999999999998
Q ss_pred ccCcccCCC---CCCCccCCCccCCC
Q 006178 225 GSIPKCLEY---LPSTSFQGNCLQNK 247 (658)
Q Consensus 225 g~ip~~l~~---l~~~~~~~n~~~~~ 247 (658)
.+|..+.. +..+.+.+|.+...
T Consensus 186 -~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 186 -TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred -ccChhhcccccCCeEEeCCCCccCc
Confidence 77876654 45567788876653
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-19 Score=189.97 Aligned_cols=150 Identities=22% Similarity=0.219 Sum_probs=118.5
Q ss_pred CCCCccc--eeecCC--------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccC-CcccCCCCCCCEEE
Q 006178 56 DPCHWTG--IACSDA--------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILD 124 (658)
Q Consensus 56 ~~c~w~g--v~C~~~--------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~ 124 (658)
..|.|.+ |.|+.. ..+++.|+|++|.+++..|..|+.+++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3465555 777642 256899999999999988899999999999999999987665 56789999999999
Q ss_pred ccCCcCCCCCcccccCCcccceeecccccCCCCChhh--hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCC
Q 006178 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202 (658)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n 202 (658)
|++|++++..|..|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|++++..|..... ...++..+++++|
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~L~~L~L~~n 164 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL-NMRRFHVLDLTFN 164 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG-GCTTCCEEECTTC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC-CCCcccEEeCCCC
Confidence 9999999888889999999999999999998866666 888999999999999998776653211 1245566666666
Q ss_pred Cccc
Q 006178 203 NLTG 206 (658)
Q Consensus 203 ~l~~ 206 (658)
.+.+
T Consensus 165 ~l~~ 168 (455)
T 3v47_A 165 KVKS 168 (455)
T ss_dssp CBSC
T ss_pred cccc
Confidence 6543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=168.87 Aligned_cols=174 Identities=24% Similarity=0.215 Sum_probs=146.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++.. +.+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+++..|..++.+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 4688999999998753 468999999999999999987 3 47899999999999999999877777899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|++++..|..|+++++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD--KLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc--cCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 99999988788899999999999999999965543221 23578888999998875 456889999999999999
Q ss_pred ccCcccCCC---CCCCccCCCccCCCCc
Q 006178 225 GSIPKCLEY---LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 225 g~ip~~l~~---l~~~~~~~n~~~~~~~ 249 (658)
+..|..+.. |..+++.+|.+.+.+|
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 887766554 5557889998776554
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-18 Score=173.84 Aligned_cols=110 Identities=21% Similarity=0.181 Sum_probs=70.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..+.++++|+.|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 46666666666666555566666666666666666666555566666666666666666665555566666666666666
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
+|.+++..+..++++++|++|+|++|++++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccce
Confidence 666665444456666666666666666654
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-19 Score=199.13 Aligned_cols=176 Identities=18% Similarity=0.301 Sum_probs=155.4
Q ss_pred CCCEEEEEecCCCCccc-----------------CCcccc--CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc
Q 006178 69 RDRVLKINISGSSLKGF-----------------LAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~-----------------~~~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 129 (658)
..+++.|+|++|.++|. +|+.++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 35789999999999996 999999 99999999999999999999999999999999999998
Q ss_pred -CCC-CCcccccCC------cccceeecccccCCCCChh--hhcCCCCCCEEeCCCCCCcccCCCCCCCCcccccccccc
Q 006178 130 -LTG-PIPPEIGNL------TGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199 (658)
Q Consensus 130 -l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l 199 (658)
++| .+|..++.+ ++|+.|+|++|+++ .+|. .++++++|++|+|++|+++|.+| .. ....++..+++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~--~~l~~L~~L~L 360 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF--GSEIKLASLNL 360 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC--EEEEEESEEEC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh--CCCCCCCEEEC
Confidence 998 899999887 99999999999999 8998 99999999999999999999999 22 23457888899
Q ss_pred CCCCccc----ccCCCC-CcEEEccCCcCcccCcccCCC-----CCCCccCCCccCCCCc
Q 006178 200 SSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 200 ~~n~l~~----~~~l~~-L~~l~ls~N~l~g~ip~~l~~-----l~~~~~~~n~~~~~~~ 249 (658)
+.|.++. +..+++ |+.|++++|.++ .+|..+.. |..+++++|.+.+..|
T Consensus 361 ~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p 419 (636)
T 4eco_A 361 AYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDG 419 (636)
T ss_dssp CSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTT
T ss_pred CCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcch
Confidence 9998764 456778 999999999999 88987653 5567888998877544
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.3e-18 Score=182.09 Aligned_cols=187 Identities=20% Similarity=0.195 Sum_probs=150.2
Q ss_pred ccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcC
Q 006178 60 WTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (658)
Q Consensus 60 w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 130 (658)
|..|.|... ...++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 567888631 24678999999999999889999999999999999999988889999999999999999999
Q ss_pred CCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---c
Q 006178 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---L 207 (658)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~ 207 (658)
++..+..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|+..+.+|...... ..++..+++++|.++. +
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG-LSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CSSCCEEECTTSCCSSCCCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhc-ccccCeecCCCCcCcccccc
Confidence 96666689999999999999999997777789999999999999966656777643332 2467777888887765 4
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
..+++|+.|+|++|.+++..|..+..+ ..+.+++|.+...
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 246 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEE
Confidence 456778888888888887777666544 4456677766544
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=170.95 Aligned_cols=179 Identities=20% Similarity=0.193 Sum_probs=148.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|++++|++++..+..++.+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 35789999999999998888999999999999999999998889999999999999999999977777899999999999
Q ss_pred cccccCCC-CChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCcccccc----ccccCCCCccccc----CCCCCcEEEcc
Q 006178 149 LQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH----GMYASSANLTGLC----HLSQLKVADFS 219 (658)
Q Consensus 149 Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~----~~~l~~n~l~~~~----~l~~L~~l~ls 219 (658)
|++|.+++ .+|..+.++++|++|+|++|++++..+..... ...+. .++++.|.++++. ...+|+.|+++
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~ 208 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV--LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALD 208 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH--HHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh--hhhccccceeeecCCCcccccCccccCCCcccEEECC
Confidence 99999987 47999999999999999999999654432111 11222 5788888887542 34589999999
Q ss_pred CCcCcccCcccCC---CCCCCccCCCccCCCCc
Q 006178 220 YNFFVGSIPKCLE---YLPSTSFQGNCLQNKDP 249 (658)
Q Consensus 220 ~N~l~g~ip~~l~---~l~~~~~~~n~~~~~~~ 249 (658)
+|.+++..+..+. ++..+++++|.+.+.++
T Consensus 209 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 209 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 9999976665555 45567899998887654
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-18 Score=175.91 Aligned_cols=173 Identities=19% Similarity=0.212 Sum_probs=94.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
+++.|+|++|.+++ +|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+++..|..+..+++|+.|+|
T Consensus 79 ~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 44555555555543 44445556666666666666554433 34555666666666666665555555556666666666
Q ss_pred ccccCCC-CChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 150 QSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 150 s~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
++|.+++ .+|..+..+++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.+
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN--SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT--TCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhc--CCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 6666654 3555556666666666666666544443221 12345555566665543 23455666666666666
Q ss_pred cccCcccCCCC----CCCccCCCccCC
Q 006178 224 VGSIPKCLEYL----PSTSFQGNCLQN 246 (658)
Q Consensus 224 ~g~ip~~l~~l----~~~~~~~n~~~~ 246 (658)
++..|..+..+ ..+++++|.+.+
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCHHHHHhhhccCCEEEccCCCeec
Confidence 66655554433 234555655544
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=190.29 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=63.8
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.|++++|.++...+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 44555666555554444455566666666666666655555566666666666666666655555555666666666666
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|.+++..+..|+++++|++|+|++|.+++..|
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 66654333334556666666666666654444
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=181.87 Aligned_cols=173 Identities=22% Similarity=0.203 Sum_probs=127.1
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCcccc-CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
|.+..+.|... ...++.|+|++|.+++..+..+. .+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777777531 23467788888888887776676 788888888888888877777788888888888888
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~ 207 (658)
|+|++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++ +|.... .++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~-----------------~~~ 159 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELI-----------------KDG 159 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGT-----------------C--
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHh-----------------cCc
Confidence 88886666677888888888888888887777788888888888888888873 443111 122
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCC-----CCCccCCCccCCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYL-----PSTSFQGNCLQNKD 248 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l-----~~~~~~~n~~~~~~ 248 (658)
..+++|+.|||++|+|++..+..+..+ ..+.+.+|.+...|
T Consensus 160 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp --CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 567889999999999996544555554 45788899777654
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=171.27 Aligned_cols=185 Identities=21% Similarity=0.304 Sum_probs=149.6
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|..+.|... ...++.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 78999999642 246899999999999988889999999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc--cCCCCCCCCccccccccccCCCCccc
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTG 206 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~~~l~~~~l~~n~l~~ 206 (658)
+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|.++. ..|... ... .+..++++.|.+++
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~l--~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF-DGL--KLNYLRISEAKLTG 186 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSS-CSC--CCSCCBCCSSBCSS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccc-cCC--ccCEEECcCCCCCc
Confidence 998 7887776 899999999999997767779999999999999999963 344322 222 66777888887766
Q ss_pred ccC--CCCCcEEEccCCcCcccCcccCC---CCCCCccCCCccCCCC
Q 006178 207 LCH--LSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (658)
Q Consensus 207 ~~~--l~~L~~l~ls~N~l~g~ip~~l~---~l~~~~~~~n~~~~~~ 248 (658)
+.. .++|+.|++++|.+++..|..+. +|..+++++|.+....
T Consensus 187 l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 233 (332)
T 2ft3_A 187 IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE 233 (332)
T ss_dssp CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC
T ss_pred cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC
Confidence 432 25788888888888877666554 3455677777766643
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.74 E-value=5e-19 Score=181.52 Aligned_cols=173 Identities=17% Similarity=0.126 Sum_probs=85.0
Q ss_pred EEEEEecCCCC-cccCCcccc-------CCCCCcEEeccCCcccccCCccc--CCCCCCCEEEccCCcCCCCCcccccCC
Q 006178 72 VLKINISGSSL-KGFLAPELG-------LLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNL 141 (658)
Q Consensus 72 v~~l~L~~n~l-~g~~~~~~~-------~l~~L~~L~L~~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~~l 141 (658)
++.|+|++|.+ .+.+|..+. .+++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44455555555 334444443 45555555555555555555544 5555555555555555544 5444444
Q ss_pred -----cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccC--CCCCCCCccccccccccCCCCcccc-------
Q 006178 142 -----TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV--PAGSNSGYTANIHGMYASSANLTGL------- 207 (658)
Q Consensus 142 -----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~--p~~~~~~~~~~l~~~~l~~n~l~~~------- 207 (658)
++|++|+|++|++++..|..|+++++|++|+|++|++.|.+ |.........++..+++++|.++++
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 55555555555555544455555555555555555554431 1111111123444555555555421
Q ss_pred -cCCCCCcEEEccCCcCcccCcc-c---CCCCCCCccCCCccC
Q 006178 208 -CHLSQLKVADFSYNFFVGSIPK-C---LEYLPSTSFQGNCLQ 245 (658)
Q Consensus 208 -~~l~~L~~l~ls~N~l~g~ip~-~---l~~l~~~~~~~n~~~ 245 (658)
..+++|+.|++++|.+++.+|. . +.+|..+++++|.+.
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 1345555555555555554431 1 233444455555444
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=161.08 Aligned_cols=151 Identities=20% Similarity=0.248 Sum_probs=126.4
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
.+++++|.++. +|..+. ..++.|+|++|++++..| ..|..+++|++|+|++|++++..|..|.++++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 57778888876 676554 457899999999998765 45899999999999999999877779999999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcccCC
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLE 232 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~l~ 232 (658)
++++..|..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|++++..|..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGND---------------------SFIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTT---------------------SSTTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHh---------------------HcCCCccCCEEECCCCcCCEECHHHhc
Confidence 99988888899999999999999999976664 245677889999999999888787766
Q ss_pred CC---CCCccCCCccCCCC
Q 006178 233 YL---PSTSFQGNCLQNKD 248 (658)
Q Consensus 233 ~l---~~~~~~~n~~~~~~ 248 (658)
.+ ..+++++|.+.+.+
T Consensus 151 ~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 151 TLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TCTTCCEEECCSCCEECSG
T ss_pred CCCCCCEEEecCcCCcCCC
Confidence 54 44677888776644
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-18 Score=189.66 Aligned_cols=188 Identities=18% Similarity=0.212 Sum_probs=152.3
Q ss_pred CCCccceeecCC-----------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEc
Q 006178 57 PCHWTGIACSDA-----------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL 125 (658)
Q Consensus 57 ~c~w~gv~C~~~-----------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 125 (658)
.|.|.|+ |+.. ..+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5889887 8631 247899999999999988899999999999999999999988899999999999999
Q ss_pred cCCcCCCCCcccccCCcccceeecccccCCC-CChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|++.+.+|...... ..++..++++.|.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~-l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG-LTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT-CCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc-ccccCeeeccCCcc
Confidence 9999998777779999999999999999986 467889999999999999999767777533222 34667777777776
Q ss_pred cc-----ccCCCCCcEEEccCCcCcccCccc----CCCCCCCccCCCccCCC
Q 006178 205 TG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 205 ~~-----~~~l~~L~~l~ls~N~l~g~ip~~----l~~l~~~~~~~n~~~~~ 247 (658)
++ +..+++|+.|+++.|.+. .+|.. +.++..+++++|.+.+.
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred cccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 54 556778888888888765 34432 45666777888876653
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.2e-18 Score=178.82 Aligned_cols=188 Identities=17% Similarity=0.216 Sum_probs=148.1
Q ss_pred CCCCCccceeecCC-----------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEE
Q 006178 55 ADPCHWTGIACSDA-----------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123 (658)
Q Consensus 55 ~~~c~w~gv~C~~~-----------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 123 (658)
..+|.|.|+ |+.. ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 457889887 6521 2478999999999998777789999999999999999999888899999999999
Q ss_pred EccCCcCCCCCcccccCCcccceeecccccCCCCChh--hhcCCCCCCEEeCCCCC-CcccCCCCCCCCccccccccccC
Q 006178 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYAS 200 (658)
Q Consensus 124 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~-l~g~~p~~~~~~~~~~l~~~~l~ 200 (658)
+|++|++++..+..++++++|++|+|++|++++ +|. .+.++++|++|++++|+ ++ .++..... ...++..++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~-~l~~L~~L~l~ 182 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFA-GLTFLEELEID 182 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTT-TCCEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCcccc-ccCHHHcc-CCCCCCEEECC
Confidence 999999996544558999999999999999994 555 78999999999999995 55 44432222 13467777888
Q ss_pred CCCccc-----ccCCCCCcEEEccCCcCcccCccc----CCCCCCCccCCCccCCC
Q 006178 201 SANLTG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 201 ~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~----l~~l~~~~~~~n~~~~~ 247 (658)
+|.+++ +..+++|+.|++++|.++ .+|.. +.++..+++++|.+...
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~ 237 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTF 237 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTC
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccc
Confidence 887654 556788899999999885 44542 45667778888877664
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=170.53 Aligned_cols=185 Identities=19% Similarity=0.242 Sum_probs=133.8
Q ss_pred CCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
.|.|+.+.|.+. ...++.|+|++|.+++..+..|+.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 368999999641 24688999999999998888999999999999999999998899999999999999999
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc--cCCCCCCCCccccccccccCCCCcc
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLT 205 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~~~l~~~~l~~n~l~ 205 (658)
|+++ .+|..+. ++|+.|++++|.+++..+..|.++++|++|++++|.++. ..+... ....++..++++.|.++
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF--QGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG--GGCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhc--cCCCCcCEEECCCCccc
Confidence 9998 6777665 788888888888887777778888888888888888853 333211 11234455555555554
Q ss_pred cccC--CCCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCC
Q 006178 206 GLCH--LSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQN 246 (658)
Q Consensus 206 ~~~~--l~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~ 246 (658)
.+.. .++|+.|++++|.+++..|..+.. |..+++++|.+..
T Consensus 185 ~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 185 TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred cCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 4321 245666666666665555544433 3334455554443
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.2e-18 Score=165.07 Aligned_cols=175 Identities=12% Similarity=0.121 Sum_probs=142.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCc-ccccCCcccCCCCCCCEEEccC-CcCCCCCcccccCCccccee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKI 147 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L 147 (658)
..++.|+|++|.+++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..|..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999999877789999999999999997 8877777899999999999998 99997666789999999999
Q ss_pred ecccccCCCCChhhhcCCCCCC---EEeCCCC-CCcccCCCCCCCCcccccc-ccccCCCCccccc----CCCCCcEEEc
Q 006178 148 NLQSNGLTGRLPAELGNLISLE---ELHLDRN-RLQGAVPAGSNSGYTANIH-GMYASSANLTGLC----HLSQLKVADF 218 (658)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~---~L~L~~N-~l~g~~p~~~~~~~~~~l~-~~~l~~n~l~~~~----~l~~L~~l~l 218 (658)
+|++|.+++ +|. +..+++|+ +|++++| ++++ +|..... ...++. .+++++|.++.+. ..++|+.|++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~-i~~~~~~-~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L 186 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS-IPVNAFQ-GLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYL 186 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE-ECTTTTT-TTBSSEEEEECCSCCCCEECTTTTTTCEEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhh-cCccccc-chhcceeEEEcCCCCCcccCHhhcCCCCCCEEEc
Confidence 999999996 776 88899998 9999999 8885 4443222 134677 8888888886532 2368999999
Q ss_pred cCCc-CcccCcccCC----CCCCCccCCCccCCCC
Q 006178 219 SYNF-FVGSIPKCLE----YLPSTSFQGNCLQNKD 248 (658)
Q Consensus 219 s~N~-l~g~ip~~l~----~l~~~~~~~n~~~~~~ 248 (658)
++|. +++..+..+. ++..+++++|.+....
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 9995 8855555554 4556788888877643
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=159.59 Aligned_cols=150 Identities=21% Similarity=0.252 Sum_probs=129.0
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.+++++++++. +|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 58999999986 566554 789999999999998888899999999999999999998889999999999999999999
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcccCCC
Q 006178 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEY 233 (658)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~l~~ 233 (658)
|++..+..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|.+++..+..+..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVD---------------------AFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTT---------------------TTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHH---------------------HcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 9966556689999999999999999966553 3556889999999999999877766655
Q ss_pred C---CCCccCCCccCCC
Q 006178 234 L---PSTSFQGNCLQNK 247 (658)
Q Consensus 234 l---~~~~~~~n~~~~~ 247 (658)
+ ..+++++|.+...
T Consensus 151 l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CTTCCEEECCSSCEECS
T ss_pred CCCCCEEEeCCCCcCCC
Confidence 4 5577889977654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.9e-18 Score=174.01 Aligned_cols=174 Identities=17% Similarity=0.167 Sum_probs=104.7
Q ss_pred CEEEEEecCCCCcccCCccc--cCCCCCcEEeccCCcccccCC----cccCCCCCCCEEEccCCcCCCCCcccccCCccc
Q 006178 71 RVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~--~~l~~L~~L~L~~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (658)
+++.|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47777777777777777776 777777777777777776544 234456777777777777776666677777777
Q ss_pred ceeecccccCCCC--Chh--hhcCCCCCCEEeCCCCCCcccCCCCC--CCCccccccccccCCCCcccc-----cCC---
Q 006178 145 VKINLQSNGLTGR--LPA--ELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASSANLTGL-----CHL--- 210 (658)
Q Consensus 145 ~~L~Ls~N~l~g~--~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~~~~~l~~~~l~~n~l~~~-----~~l--- 210 (658)
++|+|++|++.+. ++. .++.+++|++|+|++|+++. +|... .......+..+++++|.+++. ..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 7777777776542 221 22456666666666666652 11100 000113455566666665543 222
Q ss_pred CCCcEEEccCCcCcccCcccC-CCCCCCccCCCccCC
Q 006178 211 SQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQN 246 (658)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~l-~~l~~~~~~~n~~~~ 246 (658)
++|++|++++|+++ .+|..+ .+|..+++++|.+.+
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 46666666666666 455443 355566666666554
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-18 Score=196.84 Aligned_cols=173 Identities=19% Similarity=0.280 Sum_probs=151.6
Q ss_pred CCCEEEEEecCCCCcc-----------------cCCcccc--CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc
Q 006178 69 RDRVLKINISGSSLKG-----------------FLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g-----------------~~~~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 129 (658)
..+++.|+|++|.|+| .+|+.++ ++++|++|+|++|++.|.+|..|++|++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3578999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCcccccCCc-------ccceeecccccCCCCChh--hhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccc
Q 006178 130 -LTG-PIPPEIGNLT-------GLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (658)
Q Consensus 130 -l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~ 198 (658)
++| .+|..++.++ +|+.|+|++|+++ .+|. .|+++++|+.|+|++|+++ .+|. .....++..++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~---~~~L~~L~~L~ 601 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEA---FGTNVKLTDLK 601 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCC---CCTTSEESEEE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchh---hcCCCcceEEE
Confidence 998 8998887776 9999999999999 8998 9999999999999999999 8882 22346788889
Q ss_pred cCCCCccc----ccCCCC-CcEEEccCCcCcccCcccCCC-----CCCCccCCCccCCC
Q 006178 199 ASSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQNK 247 (658)
Q Consensus 199 l~~n~l~~----~~~l~~-L~~l~ls~N~l~g~ip~~l~~-----l~~~~~~~n~~~~~ 247 (658)
++.|.++. +.++++ |+.|++++|.++ .+|..+.. |..+++++|.+.+.
T Consensus 602 Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ 659 (876)
T 4ecn_A 602 LDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSE 659 (876)
T ss_dssp CCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCc
Confidence 99998864 456777 999999999999 88987655 45578888877664
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-17 Score=179.96 Aligned_cols=183 Identities=19% Similarity=0.172 Sum_probs=152.8
Q ss_pred CccceeecC---------CCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc
Q 006178 59 HWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (658)
Q Consensus 59 ~w~gv~C~~---------~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 129 (658)
.|..|.|.. ....++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 366778863 13468899999999999889999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---
Q 006178 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (658)
Q Consensus 130 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--- 206 (658)
+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|.... ...++..++++.|.+++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS--GLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSST--TCTTCCEEEEESCCCSSCCH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhcc--CCCCCCEEECCCCcCcccCh
Confidence 9965556789999999999999999998899999999999999999999976664332 23567788888888765
Q ss_pred --ccCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCc
Q 006178 207 --LCHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNC 243 (658)
Q Consensus 207 --~~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~ 243 (658)
+.++++|+.|++++|.+++..+..+..+ ..+++++|.
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 4578899999999999987777666554 445566653
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.8e-18 Score=189.16 Aligned_cols=174 Identities=21% Similarity=0.169 Sum_probs=137.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 35789999999999998888999999999999999999998899999999999999999999988899999999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcc-cCCCCCCCCccccccccccCCCCccccc-----CCCC----CcEEEc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGLC-----HLSQ----LKVADF 218 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~~~~~~l~~~~l~~n~l~~~~-----~l~~----L~~l~l 218 (658)
|++|.+++..|..++++++|++|+|++|++++ .+|.... ...++..+++++|.++++. .+.+ +..|++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS--NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG--TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHh--hcCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 99999998777889999999999999999986 5665321 1245566666666665422 1222 346777
Q ss_pred cCCcCcccCcccCC--CCCCCccCCCcc
Q 006178 219 SYNFFVGSIPKCLE--YLPSTSFQGNCL 244 (658)
Q Consensus 219 s~N~l~g~ip~~l~--~l~~~~~~~n~~ 244 (658)
++|.+++..+..+. ++..+++++|.+
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~ 216 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFN 216 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCS
T ss_pred cCCCcceeCcccccCceeeeeeccCCcc
Confidence 77777654444333 344455666644
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.3e-17 Score=159.03 Aligned_cols=160 Identities=25% Similarity=0.284 Sum_probs=132.6
Q ss_pred ccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc
Q 006178 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG 139 (658)
Q Consensus 60 w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 139 (658)
|..-.|+. +.++.+++.++. +|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 44556752 458999999875 565543 8999999999999999899999999999999999999865556689
Q ss_pred CCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEcc
Q 006178 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFS 219 (658)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls 219 (658)
.+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+ .+|. .+..+++|+.|+|+
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~---------------------~~~~l~~L~~L~L~ 143 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPR---------------------GIERLTHLTHLALD 143 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCT---------------------TGGGCTTCSEEECC
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCc---------------------ccccCCCCCEEECC
Confidence 9999999999999999877777899999999999999998 6664 24567899999999
Q ss_pred CCcCcccCcccCCC---CCCCccCCCccCCCCc
Q 006178 220 YNFFVGSIPKCLEY---LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 220 ~N~l~g~ip~~l~~---l~~~~~~~n~~~~~~~ 249 (658)
+|++++..+..+.. |..+.+.+|.+...++
T Consensus 144 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 144 QNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999666655554 5567789997776543
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=188.85 Aligned_cols=143 Identities=21% Similarity=0.168 Sum_probs=117.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|||++|.|++..+.+|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 46889999999999887888999999999999999999888888999999999999999999666677899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCccc-CCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
++|++++..+..|+++++|++|+|++|++++. +|. .+..+++|++|++++|++++..|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE---------------------YFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG---------------------GGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCch---------------------hhccchhhhhhcccCcccccccc
Confidence 99999976667799999999999999998743 232 23445667777777777766666
Q ss_pred ccCCC
Q 006178 229 KCLEY 233 (658)
Q Consensus 229 ~~l~~ 233 (658)
..+..
T Consensus 191 ~~l~~ 195 (635)
T 4g8a_A 191 TDLRV 195 (635)
T ss_dssp GGGHH
T ss_pred ccccc
Confidence 55543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-18 Score=184.70 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=137.8
Q ss_pred CCCCCCCCCCCC-----Cccce-eecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCC
Q 006178 47 LSNWNALDADPC-----HWTGI-ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120 (658)
Q Consensus 47 l~~w~~~~~~~c-----~w~gv-~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 120 (658)
+.+|.. +.+|| .|.|+ .|. ..+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHH--HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHhc-cCCccccccchhhhccccc--cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 345654 45678 79999 786 4579999999999998 777663 88999999999998 577 457899
Q ss_pred CEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccC
Q 006178 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYAS 200 (658)
Q Consensus 121 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~ 200 (658)
++|+|++|+|++ +|. +.+ +|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. ...++..++++
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-----~l~~L~~L~Ls 168 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-----LPTSLEVLSVR 168 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-----CCTTCCEEECC
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-----cCCCcCEEECC
Confidence 999999999996 787 665 89999999999997 776 68899999999999986 665 23567788888
Q ss_pred CCCcccccCC-CCCcEEEccCCcCcccCcccCCCC-------CCCccCCCccCCC
Q 006178 201 SANLTGLCHL-SQLKVADFSYNFFVGSIPKCLEYL-------PSTSFQGNCLQNK 247 (658)
Q Consensus 201 ~n~l~~~~~l-~~L~~l~ls~N~l~g~ip~~l~~l-------~~~~~~~n~~~~~ 247 (658)
+|.++++..+ ++|+.|+|++|+|+ .+|....+| ..+++++|.+...
T Consensus 169 ~N~L~~lp~l~~~L~~L~Ls~N~L~-~lp~~~~~L~~~~~~L~~L~Ls~N~l~~l 222 (571)
T 3cvr_A 169 NNQLTFLPELPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRITHI 222 (571)
T ss_dssp SSCCSCCCCCCTTCCEEECCSSCCS-SCCCCC--------CCEEEECCSSCCCCC
T ss_pred CCCCCCcchhhCCCCEEECcCCCCC-chhhHHHhhhcccccceEEecCCCcceec
Confidence 8887764333 67889999999888 677622345 6677888877653
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.2e-17 Score=160.96 Aligned_cols=156 Identities=25% Similarity=0.229 Sum_probs=137.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46899999999999988889999999999999999999988888999999999999999999777788899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|++++..+..|..+++|++|+|++|++++..+... . ...++..+++++|.+++ +..+++|+.|++++|.|+
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAF-D-KLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-T-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHc-C-cCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 9999997777778999999999999999995544322 1 23578889999999875 446789999999999998
Q ss_pred ccC
Q 006178 225 GSI 227 (658)
Q Consensus 225 g~i 227 (658)
+..
T Consensus 193 c~~ 195 (251)
T 3m19_A 193 CSR 195 (251)
T ss_dssp TTS
T ss_pred CCc
Confidence 763
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-17 Score=173.96 Aligned_cols=171 Identities=19% Similarity=0.173 Sum_probs=117.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 35677888888877655555778888888888888888777778888888888888888888777777888888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc--ccCCCCCcEEEccCCcCcccC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--~~~l~~L~~l~ls~N~l~g~i 227 (658)
++|.++...+..|.++++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~- 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL- 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS--SCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE-
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc--CCCCCCEEECCCCcCCccccccccccceeeccccccccc-
Confidence 88888843334467888888888888888765554221 12456666777776654 34456666666666666532
Q ss_pred cccCCCCCCCccCCCcc
Q 006178 228 PKCLEYLPSTSFQGNCL 244 (658)
Q Consensus 228 p~~l~~l~~~~~~~n~~ 244 (658)
+ ....+..+++++|.+
T Consensus 202 ~-~~~~L~~L~l~~n~l 217 (390)
T 3o6n_A 202 A-IPIAVEELDASHNSI 217 (390)
T ss_dssp E-CCSSCSEEECCSSCC
T ss_pred C-CCCcceEEECCCCee
Confidence 1 112344445555543
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.3e-18 Score=174.56 Aligned_cols=175 Identities=19% Similarity=0.201 Sum_probs=132.6
Q ss_pred CCEEEEEecCCCCcccCCccc--cCCCCCcEEeccCCcccccCCcccCCC-----CCCCEEEccCCcCCCCCcccccCCc
Q 006178 70 DRVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIGNLT 142 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~--~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~ 142 (658)
.+++.|+|++|.+++.+|..+ +.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..++.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 468888888888888888876 8888888888888888876 7777766 8888888888888877778888888
Q ss_pred ccceeecccccCCCC--Chhhh--cCCCCCCEEeCCCCCCcc--cCCCCCCCCccccccccccCCCCcccc------cCC
Q 006178 143 GLVKINLQSNGLTGR--LPAEL--GNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGL------CHL 210 (658)
Q Consensus 143 ~L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~~~l~~~~l~~n~l~~~------~~l 210 (658)
+|++|+|++|+++|. +|..+ .++++|++|+|++|++++ .++.... ....++..+++++|.+++. ..+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALA-AARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHH-HTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHH-hcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 888888888888765 34455 788888888888888873 2221100 0113667778888887652 235
Q ss_pred CCCcEEEccCCcCcccCcccCC-CCCCCccCCCccCCC
Q 006178 211 SQLKVADFSYNFFVGSIPKCLE-YLPSTSFQGNCLQNK 247 (658)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~l~-~l~~~~~~~n~~~~~ 247 (658)
++|+.|++++|.++ .+|..+. +|..+++++|.+.+.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCSC
T ss_pred CCCCEEECCCCccC-hhhhhccCCceEEECCCCCCCCC
Confidence 78888888888888 7777664 566778888877664
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-17 Score=181.17 Aligned_cols=173 Identities=22% Similarity=0.195 Sum_probs=116.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcc--------------
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-------------- 136 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-------------- 136 (658)
+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 46666666666666555566666666666666666665444 55566666555555555421110
Q ss_pred --cccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc---cCCC
Q 006178 137 --EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLS 211 (658)
Q Consensus 137 --~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~---~~l~ 211 (658)
....+++|+.|+|++|.+++..|..++++++|++|+|++|.+++.+|..... ....+..+++++|.++++ ..++
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-~l~~L~~L~Ls~N~l~~~~~~~~l~ 191 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFA 191 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCT
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh-hCCcccEEecCCCccccccccccCC
Confidence 0124577888888889988888888888999999999999998877654321 125677888888888753 3578
Q ss_pred CCcEEEccCCcCcccCcc--cCCCCCCCccCCCccCC
Q 006178 212 QLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 212 ~L~~l~ls~N~l~g~ip~--~l~~l~~~~~~~n~~~~ 246 (658)
+|+.|+|++|.+++..|. .+.+|..+++++|.+.+
T Consensus 192 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp TCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE
T ss_pred CCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc
Confidence 889999999999875553 13455667888887765
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-17 Score=190.83 Aligned_cols=190 Identities=21% Similarity=0.203 Sum_probs=157.9
Q ss_pred CCCccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccC-CcccCCCCCCCEEEccCCcCCCCCc
Q 006178 57 PCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIP 135 (658)
Q Consensus 57 ~c~w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (658)
.|.|..|.+ ...+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 356777777 3678999999999999999999999999999999999777666 7889999999999999999998889
Q ss_pred ccccCCcccceeecccccCCCCChhh--hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----c
Q 006178 136 PEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----C 208 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~ 208 (658)
..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..|.... ....++..+++++|.+++. .
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~-~~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSF-GKLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGG-GTCSSCCEEEEESSCCCCCCSGGGH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhH-hhCCCCCEEECCCCcCCeeCHHHcc
Confidence 99999999999999999999877776 99999999999999999976554221 2235677888888887653 3
Q ss_pred CC--CCCcEEEccCCcCcccCcccCCC---------CCCCccCCCccCCCCc
Q 006178 209 HL--SQLKVADFSYNFFVGSIPKCLEY---------LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 209 ~l--~~L~~l~ls~N~l~g~ip~~l~~---------l~~~~~~~n~~~~~~~ 249 (658)
.+ ++|+.|+++.|.+++.+|..+.. +..+++++|.+.+..+
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~ 221 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDIT 221 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTT
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHH
Confidence 33 78999999999999888876554 4556778887665443
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.71 E-value=5.8e-17 Score=175.18 Aligned_cols=173 Identities=16% Similarity=0.145 Sum_probs=117.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 35789999999999998888999999999999999999987777799999999999999999865556777788888888
Q ss_pred cccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 149 LQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 149 Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
|++|...+.+| ..|.++++|++|+|++|++++ +|... ...++..+++++|.+++ +.++++|+.|++++|+
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~---~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLT---PLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCT---TCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSC
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-ccccc---ccccccEEECcCCcCcccCcccccCccCCCEEEeCCCc
Confidence 87743333444 356777777777777777763 34311 12344555555555443 3344555555555555
Q ss_pred CcccCcccCCC---CCCCccCCCccC
Q 006178 223 FVGSIPKCLEY---LPSTSFQGNCLQ 245 (658)
Q Consensus 223 l~g~ip~~l~~---l~~~~~~~n~~~ 245 (658)
+++..|..+.. |..+++++|.+.
T Consensus 254 l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 254 VSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CceECHHHhcCCCCCCEEECCCCcCC
Confidence 55444443332 223344444444
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.7e-17 Score=154.13 Aligned_cols=131 Identities=26% Similarity=0.340 Sum_probs=109.0
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCc-ccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
.+++++|+++ .+|..+.. +|++|+|++|++++..|. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4666677774 46665543 899999999999876664 4889999999999999999888899999999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
+|++..|..|.++++|++|+|++|++++.+|. .+..+++|++|++++|.|++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPG---------------------SFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTT---------------------SSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHH---------------------HhhcCCCCCEEEeCCCCccCcCc
Confidence 99988888899999999999999999987764 24557788999999999887765
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-17 Score=174.26 Aligned_cols=173 Identities=17% Similarity=0.141 Sum_probs=113.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47888999999998887788889999999999999998766677888999999999999888655556777777777777
Q ss_pred ccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 150 QSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 150 s~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
++|+..+.+| ..|.++++|++|+|++|+++ .+|.. ....++..+++++|.+++ +.++++|+.|++++|++
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNL---TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCC---TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-ccccc---CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCce
Confidence 7743333333 35667777777777777766 44431 112344555555555443 23445555555555555
Q ss_pred cccCcccCCC---CCCCccCCCccCC
Q 006178 224 VGSIPKCLEY---LPSTSFQGNCLQN 246 (658)
Q Consensus 224 ~g~ip~~l~~---l~~~~~~~n~~~~ 246 (658)
++..|..+.. |..+++++|.+..
T Consensus 244 ~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 244 QVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp CEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred eEEChhhhcCCCCCCEEECCCCCCCc
Confidence 5444443332 2233444444443
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-17 Score=176.79 Aligned_cols=177 Identities=21% Similarity=0.285 Sum_probs=120.3
Q ss_pred CCEEEEEecCCCCcccCCcc--ccCCCCCcEEeccCCcccccCCcc-cCCCCCCCEEEccCCcCCCCCcccccCC-----
Q 006178 70 DRVLKINISGSSLKGFLAPE--LGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNL----- 141 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~--~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l----- 141 (658)
.+++.|+|++|.+++.++.. ++.+++|++|+|++|++++..|.. +.++++|++|+|++|++++..|..+..+
T Consensus 103 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L 182 (455)
T 3v47_A 103 ANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHF 182 (455)
T ss_dssp TTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEE
T ss_pred ccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccc
Confidence 45677777777777655444 677777777777777777666655 6677777777777777766555443322
Q ss_pred --------------------------------------------------------------------------------
Q 006178 142 -------------------------------------------------------------------------------- 141 (658)
Q Consensus 142 -------------------------------------------------------------------------------- 141 (658)
T Consensus 183 ~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 262 (455)
T 3v47_A 183 TLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFK 262 (455)
T ss_dssp EEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSC
T ss_pred cccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhc
Confidence
Q ss_pred ------------cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---
Q 006178 142 ------------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (658)
Q Consensus 142 ------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--- 206 (658)
++|+.|+|++|.+++.+|..++++++|++|+|++|++++..|..... ...+..+++++|.+++
T Consensus 263 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~ 340 (455)
T 3v47_A 263 DPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG--LTHLLKLNLSQNFLGSIDS 340 (455)
T ss_dssp CCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECG
T ss_pred cCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC--cccCCEEECCCCccCCcCh
Confidence 34556666666666667888888888888888888888766653321 2466777788877754
Q ss_pred --ccCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCCCC
Q 006178 207 --LCHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNKD 248 (658)
Q Consensus 207 --~~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~~ 248 (658)
+..+++|+.|++++|.+++..|..+..+ ..+++++|.+....
T Consensus 341 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (455)
T 3v47_A 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387 (455)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCC
Confidence 4567788888888888887777666544 44567777776643
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-17 Score=185.07 Aligned_cols=163 Identities=21% Similarity=0.222 Sum_probs=141.6
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35799999999999998888899999999999999999999999999999999999999999965555799999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-------cCCCCCcEEEccCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-------CHLSQLKVADFSYN 221 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-------~~l~~L~~l~ls~N 221 (658)
|++|++++..|..|+++++|++|+|++|.+++..|.... ...++..++++.|.++++ ..+++|+.|++++|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQV--QLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSS--CCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhc--ccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 999999987778999999999999999999987665432 235788889999988764 24588999999999
Q ss_pred cCcccCcccCCC
Q 006178 222 FFVGSIPKCLEY 233 (658)
Q Consensus 222 ~l~g~ip~~l~~ 233 (658)
.+++..|.++..
T Consensus 182 ~l~~~~~~~~~~ 193 (680)
T 1ziw_A 182 QIKEFSPGCFHA 193 (680)
T ss_dssp CCCCBCTTGGGG
T ss_pred cccccChhhhhh
Confidence 999888876543
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.2e-17 Score=183.23 Aligned_cols=160 Identities=19% Similarity=0.160 Sum_probs=142.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|.+++..|..|+.+++|++|+|++|++.+..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47899999999999998999999999999999999999999999999999999999999999888999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCccc-CCCCCCCCccccccccccCCCCccc-----ccCCCCCc--EEEccCC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLK--VADFSYN 221 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~--~l~ls~N 221 (658)
++|.+++..|..++++++|++|+|++|++++. +|.... ..++..+++++|.+++ +..+++|+ .|++++|
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n 189 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP---TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC---CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccC---CcccCEEEcccCcccccChhhhhhhcccceeEEecCCC
Confidence 99999987688899999999999999999963 344322 4678888999998875 45688888 8999999
Q ss_pred cCcccCcccCC
Q 006178 222 FFVGSIPKCLE 232 (658)
Q Consensus 222 ~l~g~ip~~l~ 232 (658)
.+++..|..+.
T Consensus 190 ~l~~~~~~~~~ 200 (606)
T 3t6q_A 190 DIAGIEPGAFD 200 (606)
T ss_dssp CCCEECTTTTT
T ss_pred ccCccChhHhh
Confidence 99988876654
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.5e-17 Score=181.18 Aligned_cols=154 Identities=19% Similarity=0.190 Sum_probs=110.2
Q ss_pred cCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccceeecccccCCCCChhh-hcCCCC
Q 006178 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~ 167 (658)
..+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..++++++|+.|+|++|++++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 567778888888888887777778888888888888888775 23456777888888888888887756553 677788
Q ss_pred CCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc----cCCCCCcEEEccCCcCcccCccc-CCC---CCCCcc
Q 006178 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKC-LEY---LPSTSF 239 (658)
Q Consensus 168 L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~----~~l~~L~~l~ls~N~l~g~ip~~-l~~---l~~~~~ 239 (658)
|++|+|++|++++.+|.... ..+..+++++|.++.+ ..+++|+.|++++|+++ .+|.. +.. +..+++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~----~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP----PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC----TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred CCEEECCCCCCCcchhhhhc----CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 88888888888777665322 3566777788777643 35678888888888888 56654 443 445677
Q ss_pred CCCccCCCCc
Q 006178 240 QGNCLQNKDP 249 (658)
Q Consensus 240 ~~n~~~~~~~ 249 (658)
++|.+.+.|+
T Consensus 505 ~~N~~~c~c~ 514 (562)
T 3a79_B 505 HDNPWDCTCP 514 (562)
T ss_dssp CSCCBCCCHH
T ss_pred cCCCcCCCcc
Confidence 7887766543
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=158.58 Aligned_cols=156 Identities=22% Similarity=0.223 Sum_probs=134.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 57899999999999866667799999999999999999877778899999999999999999887788999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|.+++..+..|..+++|++|+|++|++++..+.. .. ...++..++++.|.++. +..+++|+.|++++|.+.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGA-FD-KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT-TT-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhH-hc-cCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 999999766667999999999999999998644432 22 23577888999998875 446789999999999987
Q ss_pred ccC
Q 006178 225 GSI 227 (658)
Q Consensus 225 g~i 227 (658)
..-
T Consensus 219 c~c 221 (270)
T 2o6q_A 219 CTC 221 (270)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-17 Score=155.11 Aligned_cols=126 Identities=24% Similarity=0.329 Sum_probs=114.9
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCc-cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
|.|+.+.|+.. ...++.|+|++|.+++..+. .++.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 77888888641 23789999999999987665 489999999999999999999999999999999999999
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999999999999999999999999999987654
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.4e-18 Score=194.79 Aligned_cols=195 Identities=21% Similarity=0.137 Sum_probs=79.0
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeecCCCCCEEEEEecCCCCccc--------------------
Q 006178 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGF-------------------- 85 (658)
Q Consensus 26 ~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~v~~l~L~~n~l~g~-------------------- 85 (658)
..++.+|+++..+........-..|.......+.|.++.++ .++++.|+|.+|.+...
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceec--CCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 45677888888877533333334565444456789988886 35666666666655442
Q ss_pred -------CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCC
Q 006178 86 -------LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL 158 (658)
Q Consensus 86 -------~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 158 (658)
.+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 1233444444444444444444 34444444444444444444444 44444444444444444444444 44
Q ss_pred hhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcccCCCCC---
Q 006178 159 PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP--- 235 (658)
Q Consensus 159 p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~l~~l~--- 235 (658)
|..|++|++|++|+|++|.|+ .+|. ++..+++|+.|+|++|.|+|.+|..+..+.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~---------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~ 343 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPW---------------------EFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTG 343 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCS---------------------STTSCTTCCCEECTTSCCCSHHHHHHHHHHHHH
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccCh---------------------hhhcCCCccEEeCCCCccCCCChHHHhhcchhh
Confidence 444444444444444444443 3333 244566777777777777777666554321
Q ss_pred -CCccCCCccCCC
Q 006178 236 -STSFQGNCLQNK 247 (658)
Q Consensus 236 -~~~~~~n~~~~~ 247 (658)
.+.+.+|.+.+.
T Consensus 344 ~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 344 LIFYLRDNRPEIP 356 (727)
T ss_dssp HHHHHHHCCCCCC
T ss_pred hHHhhccCcccCc
Confidence 134455555443
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-17 Score=180.74 Aligned_cols=152 Identities=18% Similarity=0.187 Sum_probs=73.4
Q ss_pred cCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccceeecccccCCCCChhh-hcCCCC
Q 006178 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~ 167 (658)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..++.+++|+.|+|++|.+++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 344455555555555555455555555555555555555543 33344555555555555555555434432 444455
Q ss_pred CCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccCccc-CCC---CCCCcc
Q 006178 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSIPKC-LEY---LPSTSF 239 (658)
Q Consensus 168 L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~ip~~-l~~---l~~~~~ 239 (658)
|++|+|++|++++.+|.... ..+..+++++|.++. +..+++|+.|++++|+++ .+|.. +.. +..+++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~----~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 475 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP----PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWL 475 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC----TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCEEECcCCCCCcchhhhhc----ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEEC
Confidence 55555555555544443211 244445555555443 224555555555555555 34433 322 333445
Q ss_pred CCCccCCC
Q 006178 240 QGNCLQNK 247 (658)
Q Consensus 240 ~~n~~~~~ 247 (658)
++|.+.+.
T Consensus 476 ~~N~~~c~ 483 (520)
T 2z7x_B 476 HTNPWDCS 483 (520)
T ss_dssp CSSCBCCC
T ss_pred cCCCCccc
Confidence 55554443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=152.96 Aligned_cols=166 Identities=20% Similarity=0.139 Sum_probs=122.1
Q ss_pred EEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 73 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 468889988876 45433 568999999999999877777899999999999999999666666899999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccC
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~i 227 (658)
++++..+..|.++++|++|+|++|++++..+... . ...++..++++.|.+++ +..+++|+.|++++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVF-D-KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-T-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHh-c-cCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 9997767778999999999999999985444321 1 12345556666666543 334566666666666666544
Q ss_pred cccCCCCCCCccCCCccCCC
Q 006178 228 PKCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 228 p~~l~~l~~~~~~~n~~~~~ 247 (658)
| .+..+....|.+.+.
T Consensus 165 ~----~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 165 P----GIRYLSEWINKHSGV 180 (208)
T ss_dssp T----TTHHHHHHHHHCTTT
T ss_pred C----CHHHHHHHHHhCCce
Confidence 3 233344445544443
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-16 Score=180.12 Aligned_cols=176 Identities=18% Similarity=0.154 Sum_probs=117.1
Q ss_pred CCEEEEEecCCCCcccCCcc-ccCCCCCcEEeccCCcccccC--CcccCCCCCCCEEEccCCcCCCCCcccccCCcccce
Q 006178 70 DRVLKINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGII--PKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~-~~~l~~L~~L~L~~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (658)
..++.|+|++|.+.+.+|.. +..+++|++|+|++|.+.+.. |..+..+++|++|+|++|.+++..|..+..+++|+.
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 45777778777777666654 777777777777777777654 666777777777777777777666777777777777
Q ss_pred eecccccCCCCChhh-hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc--------ccCCCCCcEEE
Q 006178 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--------LCHLSQLKVAD 217 (658)
Q Consensus 147 L~Ls~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--------~~~l~~L~~l~ 217 (658)
|+|++|.+++..|.. +.++++|++|++++|.+++..|..... ..++..+++++|.+++ +..+++|+.|+
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~ 482 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG--LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILV 482 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT--CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEE
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC--CCCCCEEECCCCCCCccccccchhhccCCCccEEE
Confidence 777777777665543 677777777777777777655543211 2455666666666543 44566677777
Q ss_pred ccCCcCcccCcccCCCC---CCCccCCCccCCC
Q 006178 218 FSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 218 ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
+++|.+++..|..+..+ ..+++++|.+.+.
T Consensus 483 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 515 (606)
T 3t6q_A 483 LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSS 515 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCGG
T ss_pred CCCCccCccChhhhccccCCCEEECCCCccCcC
Confidence 77777776666655443 3345666655543
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.8e-17 Score=182.75 Aligned_cols=174 Identities=17% Similarity=0.098 Sum_probs=132.1
Q ss_pred CCEEEEEecCCCCccc--CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc-ccccCCcccce
Q 006178 70 DRVLKINISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~--~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (658)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+.+ +|..+..+++|+.|++++|++++..| ..+..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4688888888888876 47778888888888888888875 56778888888888888888887766 57788888888
Q ss_pred eecccccCCCCChhhhcCCCCCCEEeCCCCCCccc-CCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
|++++|.+++..|..+.++++|++|++++|++++. +|.... ...++..+++++|.+++ +..+++|+.|++++
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFA--NTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT--TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhc--cCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 88888888888888888888888888888888874 454322 12466777778877654 45677888888888
Q ss_pred CcCcccCcccCCCC---CCCccCCCccCC
Q 006178 221 NFFVGSIPKCLEYL---PSTSFQGNCLQN 246 (658)
Q Consensus 221 N~l~g~ip~~l~~l---~~~~~~~n~~~~ 246 (658)
|++++.+|..+..+ ..+++++|.+..
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 88887777776554 446677776664
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-17 Score=170.45 Aligned_cols=133 Identities=20% Similarity=0.193 Sum_probs=106.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcc--cccCCcccce
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP--EIGNLTGLVK 146 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 146 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|. .+..+++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 357899999999999988888999999999999999999755555899999999999999998 4555 7889999999
Q ss_pred eecccc-cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 147 INLQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 147 L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
|++++| .+++..|..|.++++|++|++++|++++..|..... ..++..++++.|.+
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~--l~~L~~L~l~~n~l 210 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS--IQNVSHLILHMKQH 210 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSCS
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhc--cccCCeecCCCCcc
Confidence 999998 477666778999999999999999998877764322 12344444444443
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=159.87 Aligned_cols=171 Identities=25% Similarity=0.243 Sum_probs=140.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.+++++++++. +|+.+. +.|+.|+|++|.+++..|..|..+++|++|+|++|.+++ +|.. +.+++|+.|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEE
Confidence 3468899999999986 666554 789999999999999889999999999999999999985 4543 8899999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
|++|+++ .+|..+..+++|++|+|++|++++..|... . ...++..+++++|.+++ +..+++|+.|+|++|++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~-~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGAL-R-GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTT-T-TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHH-c-CCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 9999999 789999999999999999999995544322 2 23578888999998875 35678999999999999
Q ss_pred cccCcccC---CCCCCCccCCCccCCC
Q 006178 224 VGSIPKCL---EYLPSTSFQGNCLQNK 247 (658)
Q Consensus 224 ~g~ip~~l---~~l~~~~~~~n~~~~~ 247 (658)
++..+..+ .+|..+++++|.+...
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~i 187 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYTI 187 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCcc
Confidence 95544444 4556678899977753
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.3e-17 Score=190.83 Aligned_cols=85 Identities=21% Similarity=0.179 Sum_probs=49.1
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 291 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 45555555555555555555555666666666666555555555556666666666666554444455555666666665
Q ss_pred cccCC
Q 006178 151 SNGLT 155 (658)
Q Consensus 151 ~N~l~ 155 (658)
+|.++
T Consensus 371 ~N~l~ 375 (844)
T 3j0a_A 371 DNALT 375 (844)
T ss_dssp TCCSC
T ss_pred CCCCC
Confidence 55554
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=149.03 Aligned_cols=126 Identities=24% Similarity=0.325 Sum_probs=95.7
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|.++.|+.. ...++.|+|++|.+++..+..++.+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 78999999641 236778888888888766666778888888888888888666666778888888888888
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
++++..+..+..+++|+.|+|++|.+++..+..+..+++|++|+|++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8886656667788888888888888886555556778888888888888876554
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=151.02 Aligned_cols=149 Identities=13% Similarity=0.175 Sum_probs=115.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. +| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 368899999999984 55 6999999999999999775 3457899999999999999999888999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc-
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP- 228 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip- 228 (658)
++|.+++..|..++.+++|++|+|++|++.+.+|. +..+++|+.|++++|.+++..+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~----------------------l~~l~~L~~L~l~~n~i~~~~~l 177 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP----------------------LKTLPELKSLNIQFDGVHDYRGI 177 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG----------------------GGGCSSCCEEECTTBCCCCCTTG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh----------------------hcCCCCCCEEECCCCCCcChHHh
Confidence 99999988899999999999999999983334442 3345566666666666654211
Q ss_pred ccCCCCCCCccCCCcc
Q 006178 229 KCLEYLPSTSFQGNCL 244 (658)
Q Consensus 229 ~~l~~l~~~~~~~n~~ 244 (658)
..+.+|..+++.+|.+
T Consensus 178 ~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 178 EDFPKLNQLYAFSQTI 193 (197)
T ss_dssp GGCSSCCEEEECBC--
T ss_pred ccCCCCCEEEeeCccc
Confidence 1233444455555543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=172.79 Aligned_cols=178 Identities=21% Similarity=0.211 Sum_probs=129.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|.++++|+.|+|
T Consensus 80 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 159 (477)
T 2id5_A 80 FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 159 (477)
T ss_dssp TTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEE
T ss_pred ccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEEC
Confidence 47889999999998866667888999999999999999888888999999999999999998877888888999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCC----------------------ccccccccccCCCCccc-
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG----------------------YTANIHGMYASSANLTG- 206 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~----------------------~~~~l~~~~l~~n~l~~- 206 (658)
++|++++..+..|.++++|+.|+|++|++++..+...... ...++..+++++|.++.
T Consensus 160 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 239 (477)
T 2id5_A 160 EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAV 239 (477)
T ss_dssp ESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSC
T ss_pred CCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccccc
Confidence 9999987767778888888888888888876544321110 00134445555565543
Q ss_pred ----ccCCCCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCCC
Q 006178 207 ----LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNK 247 (658)
Q Consensus 207 ----~~~l~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~~ 247 (658)
+.++++|+.|+|++|.+++..+..+.. |..+.+++|.+...
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEE
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceE
Confidence 335667777777777776555554443 34455666655543
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.67 E-value=8e-17 Score=166.29 Aligned_cols=137 Identities=10% Similarity=0.066 Sum_probs=96.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccc----------cchhhH--------HHHHHHHHHHHhccCCCccce
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----------WTGYLE--------LYFQREVADLARINHENTGKL 423 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----------~~~~~~--------~~~~~E~~~l~~l~H~nIv~l 423 (658)
+.+.||+|+||.||+|...+|+.||||.+...... ...... ....+|...|.++.+..+.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 44789999999999999999999999986432100 000001 112356667777755443222
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
.-+... ..+|||||+++++|.++... .....++.|++.+|.|||+. +||||||||.|||+++++.
T Consensus 179 ~p~~~~----~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 179 EPIAQS----RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CEEEEE----TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEEC
T ss_pred eeeecc----CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCC
Confidence 222222 23799999999888776431 12456889999999999998 9999999999999988763
Q ss_pred ----------ceeccccchh
Q 006178 504 ----------PKLVDFDSWK 513 (658)
Q Consensus 504 ----------~kl~DFGla~ 513 (658)
+.|+||+-+.
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCE
T ss_pred cccccccccceEEEEeCCcc
Confidence 7899998553
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=9.9e-17 Score=182.71 Aligned_cols=113 Identities=20% Similarity=0.246 Sum_probs=74.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|+|++|.+++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 56667777777766666666667777777777776665444456667777777777776665555666666777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
+|.+++..|..++++++|++|++++|++++..|
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 776666666666666666666666666664433
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.7e-16 Score=160.73 Aligned_cols=170 Identities=18% Similarity=0.252 Sum_probs=141.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|+.|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 357999999999999988999999999999999999998 5776654 7999999999999987777899999999999
Q ss_pred cccccCC--CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCC
Q 006178 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (658)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N 221 (658)
|++|.++ +..|..+.++++|++|++++|+++ .+|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 226 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP----PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 226 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC----TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSS
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc----ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 377888999999999999999998 4665432 467777888887754 456788888888888
Q ss_pred cCcccCcccCC---CCCCCccCCCccCC
Q 006178 222 FFVGSIPKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 222 ~l~g~ip~~l~---~l~~~~~~~n~~~~ 246 (658)
.+++..|..+. +|..+++++|.+..
T Consensus 227 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 254 (330)
T 1xku_A 227 SISAVDNGSLANTPHLRELHLNNNKLVK 254 (330)
T ss_dssp CCCEECTTTGGGSTTCCEEECCSSCCSS
T ss_pred cCceeChhhccCCCCCCEEECCCCcCcc
Confidence 88877665554 45566778886664
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.1e-17 Score=167.06 Aligned_cols=176 Identities=16% Similarity=0.099 Sum_probs=103.2
Q ss_pred CEEEEEecCCCCcccCCc---cccCCCCCcEEeccCCcccccCCccc--CCCCCCCEEEccCCcCCCCCc----ccccCC
Q 006178 71 RVLKINISGSSLKGFLAP---ELGLLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIP----PEIGNL 141 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~---~~~~l~~L~~L~L~~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l 141 (658)
+++.+.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 455666666655421100 11234557777777777776666666 667777777777777765544 334456
Q ss_pred cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCccc--CCCCCCCCccccccccccCCCCcccc--------cCCC
Q 006178 142 TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA--VPAGSNSGYTANIHGMYASSANLTGL--------CHLS 211 (658)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--~p~~~~~~~~~~l~~~~l~~n~l~~~--------~~l~ 211 (658)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. ++.........++..+++++|.++.+ ..++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 6777777777777666666667777777777777766542 22222111224566666677666532 2456
Q ss_pred CCcEEEccCCcCcccCcccCC------CCCCCccCCCccCC
Q 006178 212 QLKVADFSYNFFVGSIPKCLE------YLPSTSFQGNCLQN 246 (658)
Q Consensus 212 ~L~~l~ls~N~l~g~ip~~l~------~l~~~~~~~n~~~~ 246 (658)
+|++|||++|.+++.+|..+. +|..+++++|.+..
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~ 265 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ 265 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc
Confidence 677777777777666554432 44456666666653
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=147.02 Aligned_cols=139 Identities=22% Similarity=0.175 Sum_probs=116.1
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.+++.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56889999999998 78898899999999999999999875 7789999999999999999987888888899999999
Q ss_pred cccccCCCCC-hhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccC
Q 006178 149 LQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 149 Ls~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~i 227 (658)
|++|.+++.. +..+..+++|++|++++|.+++..+-. ...+..+++|+.|++++|.+. .+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~------------------~~~~~~l~~L~~L~l~~n~~~-~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYR------------------ESVFKLLPQLTYLDGYDREDQ-EA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHH------------------HHHHTTCSSCCEETTEETTSC-BC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHH------------------HHHHHhCccCcEecCCCCChh-hc
Confidence 9999998632 278999999999999999998443200 012556788999999999876 45
Q ss_pred cc
Q 006178 228 PK 229 (658)
Q Consensus 228 p~ 229 (658)
|.
T Consensus 163 ~~ 164 (168)
T 2ell_A 163 PD 164 (168)
T ss_dssp CS
T ss_pred cc
Confidence 53
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.9e-17 Score=164.78 Aligned_cols=165 Identities=19% Similarity=0.138 Sum_probs=91.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|++|+|++|++++..+ +++|++|++++|++++..+ ..+++|+.|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSC---SRGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCSEEEE---CCCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC-----CCCcCEEECCCCccCCcCc---cccCCCCEEEC
Confidence 456777777777766543 6777777777777777664321 2444455555444443222 12455666666
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc---cCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~---~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++..|..++.+++|++|+|++|++++..|..... ....+..+++++|.++++ ..+++|+.|++++|.+++.
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh-ccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcc
Confidence 666666555556666666666666666666544432111 123455566666665432 2355666666666666643
Q ss_pred CcccC---CCCCCCccCCCccCC
Q 006178 227 IPKCL---EYLPSTSFQGNCLQN 246 (658)
Q Consensus 227 ip~~l---~~l~~~~~~~n~~~~ 246 (658)
.| .+ .+|..+++++|.+..
T Consensus 207 ~~-~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 207 GP-EFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp CG-GGGGGTTCSEEECTTSCCCE
T ss_pred hh-hhcccCcccEEECcCCcccc
Confidence 22 23 334445566665543
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.65 E-value=6.2e-16 Score=158.01 Aligned_cols=165 Identities=21% Similarity=0.356 Sum_probs=111.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 467778888887776433 7778888888888888775 33 57778888888888888774 443 777888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|.+++ +|. +..+++|++|+|++|++++..+ .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 137 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~----l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 137 DLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP----LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh----hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcc
Confidence 8888875 333 7777888888888887775332 1122456667777777665 34567778888888877755
Q ss_pred Cc-ccCCCCCCCccCCCccCC
Q 006178 227 IP-KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 227 ip-~~l~~l~~~~~~~n~~~~ 246 (658)
.| ..+.+|..+++++|.+..
T Consensus 211 ~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 211 SPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GGGTTCTTCCEEEEEEEEEEC
T ss_pred ccccCCCCCCEEEccCCeeec
Confidence 43 112334445666776554
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-16 Score=173.79 Aligned_cols=177 Identities=19% Similarity=0.123 Sum_probs=125.9
Q ss_pred CCEEEEEecCCCCcccC--CccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc-ccccCCcccce
Q 006178 70 DRVLKINISGSSLKGFL--APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~--~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (658)
.+++.|+|++|.+++.. |..+..+++|++|+|++|.+.+..+. +..+++|+.|++++|.+++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 45677777777776543 56677778888888888877764443 7778888888888888876655 45777888888
Q ss_pred eecccccCCCCChhhhcCCCCCCEEeCCCCCCc-ccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~-g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
|+|++|.+++..|..+.++++|++|+|++|+++ +.+|.... ...++..+++++|.+++ +..+++|+.|++++
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT--ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT--TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh--cccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 888888888777777888888888888888876 56664322 23466777777777654 34567788888888
Q ss_pred CcCcccCcccCCCC---CCCccCCCccCCCCc
Q 006178 221 NFFVGSIPKCLEYL---PSTSFQGNCLQNKDP 249 (658)
Q Consensus 221 N~l~g~ip~~l~~l---~~~~~~~n~~~~~~~ 249 (658)
|++++..|..+..+ ..+++++|.+.+.++
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 88887766665544 445677777666544
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.5e-16 Score=174.27 Aligned_cols=162 Identities=20% Similarity=0.168 Sum_probs=128.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 35789999999999998888999999999999999999998888999999999999999999987788999999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcc-cCCCCCCCCccccccccccCCCCcccc-----cCCCCC----cEEEc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQL----KVADF 218 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~~l~~L----~~l~l 218 (658)
|++|++++..+..++++++|++|+|++|.+++ .+|.... ...+++.+++++|.++++ ..+.+| ..|++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhc--ccCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99999997555579999999999999999986 4564321 123455556666655432 233344 56666
Q ss_pred cCCcCcccCcccCC
Q 006178 219 SYNFFVGSIPKCLE 232 (658)
Q Consensus 219 s~N~l~g~ip~~l~ 232 (658)
++|.+++..|..+.
T Consensus 185 ~~n~l~~~~~~~~~ 198 (570)
T 2z63_A 185 SLNPMNFIQPGAFK 198 (570)
T ss_dssp TTCCCCEECTTTTT
T ss_pred CCCCceecCHHHhc
Confidence 66666655554443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.64 E-value=8.5e-16 Score=158.90 Aligned_cols=168 Identities=19% Similarity=0.250 Sum_probs=131.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|.++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 357899999999999988999999999999999999998 5776655 7999999999999976666799999999999
Q ss_pred cccccCC--CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCC
Q 006178 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (658)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N 221 (658)
+++|.++ +..|..+..+ +|++|++++|++++ +|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP----ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC----SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc----CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 4778888888 89999999999884 565322 356666777776653 445667777777777
Q ss_pred cCcccCcccCC---CCCCCccCCCccC
Q 006178 222 FFVGSIPKCLE---YLPSTSFQGNCLQ 245 (658)
Q Consensus 222 ~l~g~ip~~l~---~l~~~~~~~n~~~ 245 (658)
.+++..|..+. +|..+++++|.+.
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 77766554443 3444566666555
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-16 Score=143.29 Aligned_cols=131 Identities=22% Similarity=0.170 Sum_probs=112.1
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.+++.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999998 88999999999999999999999976 7799999999999999999987999888899999999
Q ss_pred cccccCCCC-ChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccC
Q 006178 149 LQSNGLTGR-LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSY 220 (658)
Q Consensus 149 Ls~N~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~ 220 (658)
|++|.+++. .|..+..+++|++|++++|.+++..+-. ...+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~------------------~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYR------------------ENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHH------------------HHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHH------------------HHHHHHCCCcccccCCC
Confidence 999999963 4488999999999999999998543300 01245577888888763
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.63 E-value=2e-15 Score=140.84 Aligned_cols=132 Identities=26% Similarity=0.289 Sum_probs=113.0
Q ss_pred EEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 73 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
+.+++++++++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 578999999986 45433 479999999999999877778899999999999999999766667899999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
++++..+..+.++++|++|+|++|++++ +|.. .+..+++|+.|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~--------------------~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKS-VPDG--------------------IFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTT--------------------TTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceE-eCHH--------------------HhcCCcccCEEEecCCCeeccCc
Confidence 9998777778999999999999999984 4432 23457889999999999998765
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.2e-16 Score=172.11 Aligned_cols=173 Identities=18% Similarity=0.126 Sum_probs=154.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 46889999999999988889999999999999999999988888999999999999999999555555799999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK 229 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~ 229 (658)
++|.+++..|..|+++++|++|+|++|.+++. +. .....+..++++.|.++++....+|+.|++++|.++...+.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~----~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~ 229 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DL----SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 229 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CG----GGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-Ch----hhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc
Confidence 99999998888999999999999999999864 32 12356778899999999999999999999999999977667
Q ss_pred cCCCCCCCccCCCccCCC
Q 006178 230 CLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 230 ~l~~l~~~~~~~n~~~~~ 247 (658)
...+|..+.+++|.+.+.
T Consensus 230 ~~~~L~~L~L~~n~l~~~ 247 (597)
T 3oja_B 230 VNVELTILKLQHNNLTDT 247 (597)
T ss_dssp CCSCCCEEECCSSCCCCC
T ss_pred cCCCCCEEECCCCCCCCC
Confidence 778899999999988874
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-15 Score=142.53 Aligned_cols=127 Identities=30% Similarity=0.393 Sum_probs=109.5
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.+++++|+++. +|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 46777888874 566543 68999999999998 688999999999999999999998878889999999999999999
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
+++..|..|.++++|++|+|++|++++ +|.. .+..+++|+.|++++|.+.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~-~~~~--------------------~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISV-VPEG--------------------AFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCB-CCTT--------------------TTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCe-eChh--------------------hhhcCccccEEEeCCCCeec
Confidence 998888899999999999999999984 4432 24567889999999999874
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-15 Score=153.79 Aligned_cols=166 Identities=23% Similarity=0.344 Sum_probs=137.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. ++ .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 478999999999987 44 68999999999999999996544 9999999999999999985 44 7999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++ +|. +..+++|++|+|++|++++..+ .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~----l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP----LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG----GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc----ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcC
Confidence 9999996 554 9999999999999999986543 1223577888999998875 55788999999999999865
Q ss_pred Cc-ccCCCCCCCccCCCccCCC
Q 006178 227 IP-KCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 227 ip-~~l~~l~~~~~~~n~~~~~ 247 (658)
.| ..+.+|..+++++|.+.+.
T Consensus 189 ~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 189 SPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp GGGGGCTTCCEEECTTSCCCBC
T ss_pred hhhcCCCCCCEEEccCCccCcc
Confidence 44 2345667788899977764
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.3e-16 Score=173.72 Aligned_cols=175 Identities=19% Similarity=0.196 Sum_probs=144.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCC-CCcccccCCccccee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 147 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|+.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3579999999999999888999999999999999999998888789999999999999999986 467889999999999
Q ss_pred ecccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----cCCCCCcEEEccCC
Q 006178 148 NLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221 (658)
Q Consensus 148 ~Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~~l~~L~~l~ls~N 221 (658)
+|++|.+.+.+| ..|.++++|++|++++|++++.+|..... ..++..++++.|.+..+ ..+++|+.|++++|
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~--l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS--IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc--cccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 999999655665 68999999999999999999988875432 34667777777776542 35788999999999
Q ss_pred cCcccC------cccCCCCCCCccCCCccC
Q 006178 222 FFVGSI------PKCLEYLPSTSFQGNCLQ 245 (658)
Q Consensus 222 ~l~g~i------p~~l~~l~~~~~~~n~~~ 245 (658)
++++.. .....++..+.+.+|.+.
T Consensus 207 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 236 (549)
T 2z81_A 207 NLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236 (549)
T ss_dssp BCTTCCCCCCSSCCCCCCCCEEEEESCEEE
T ss_pred ccccccccccchhhhhhcccceeccccccc
Confidence 998742 223455666777776554
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=7.5e-16 Score=169.63 Aligned_cols=155 Identities=23% Similarity=0.253 Sum_probs=136.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEccCCcCCCCCccc-ccCCcccc
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLV 145 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 145 (658)
...++.|+|++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4578999999999999999999999999999999999997 57788999999999999999999867765 88899999
Q ss_pred eeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|.... ....+..+++++|.++. +..+++|+.|++++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV--KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG--GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh--cCCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 999999999988887765 79999999999999 7886433 24577888999998875 45678999999999
Q ss_pred CcCcccCc
Q 006178 221 NFFVGSIP 228 (658)
Q Consensus 221 N~l~g~ip 228 (658)
|.+++..+
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99987654
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-15 Score=157.61 Aligned_cols=151 Identities=23% Similarity=0.130 Sum_probs=127.9
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccC-CCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
.+++++++|+. +|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 68999999987 666554 4689999999999998888887 9999999999999999777788999999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCccc--
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC-- 230 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~-- 230 (658)
+|++..+..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|.|++..+..
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~l~~~~~~ 157 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN---------------------AFEDMAQLQKLYLSQNQISRFPVELIK 157 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTT---------------------TTTTCTTCCEEECCSSCCCSCCGGGTC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHH---------------------HhCCcccCCEEECCCCcCCeeCHHHhc
Confidence 99987777899999999999999999865543 3556889999999999999643333
Q ss_pred ----CCCCCCCccCCCccCCCC
Q 006178 231 ----LEYLPSTSFQGNCLQNKD 248 (658)
Q Consensus 231 ----l~~l~~~~~~~n~~~~~~ 248 (658)
+.+|..+++++|.+....
T Consensus 158 ~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 158 DGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp ----CTTCCEEECCSSCCCCCC
T ss_pred CcccCCcCCEEECCCCCCCccC
Confidence 345667889999887654
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=144.18 Aligned_cols=122 Identities=21% Similarity=0.295 Sum_probs=109.6
Q ss_pred CCccceeecC---------CCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~---------~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|..+.|+. ....++.|+|++|.++ .+|..|..+++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 5677788863 1247899999999998 57889999999999999999999988889999999999999999
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
+|++..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888889999999999999999997666679999999999999999874
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.3e-15 Score=169.29 Aligned_cols=155 Identities=21% Similarity=0.230 Sum_probs=135.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEccCCcCCCCCccc-ccCCcccc
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLV 145 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 145 (658)
..+++.|+|++|.+++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4679999999999999999999999999999999999997 34577999999999999999999867764 88899999
Q ss_pred eeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
.|+|++|++++.+|..+. ++|++|+|++|+++ .+|.... ....+..+++++|.++. +..+++|+.|++++
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT--HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT--SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc--CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 999999999988777655 79999999999998 7887554 24578889999999875 45678999999999
Q ss_pred CcCcccCc
Q 006178 221 NFFVGSIP 228 (658)
Q Consensus 221 N~l~g~ip 228 (658)
|.+++..|
T Consensus 507 N~~~c~c~ 514 (562)
T 3a79_B 507 NPWDCTCP 514 (562)
T ss_dssp CCBCCCHH
T ss_pred CCcCCCcc
Confidence 99998765
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=159.87 Aligned_cols=171 Identities=19% Similarity=0.164 Sum_probs=116.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccc-ccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ 148 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. +.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 35667777777777766667777777777777777777666666777777777777777777 34443 56777777777
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
|++|.+++..|..|.++++|++|++++|++++. +. .....+..++++.|.++++....+|+.|++++|.++....
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~----~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~ 222 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DL----SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 222 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CG----GGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEEC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc-cc----ccccccceeecccccccccCCCCcceEEECCCCeeeeccc
Confidence 777777766666677777777777777777643 21 1123556667777777777777777777777777775544
Q ss_pred ccCCCCCCCccCCCccCC
Q 006178 229 KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 229 ~~l~~l~~~~~~~n~~~~ 246 (658)
....++..+.+++|.+..
T Consensus 223 ~~~~~L~~L~l~~n~l~~ 240 (390)
T 3o6n_A 223 PVNVELTILKLQHNNLTD 240 (390)
T ss_dssp CCCSSCCEEECCSSCCCC
T ss_pred cccccccEEECCCCCCcc
Confidence 445566667777776554
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.61 E-value=5e-16 Score=167.42 Aligned_cols=164 Identities=23% Similarity=0.161 Sum_probs=68.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCC--------------------------------
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLK-------------------------------- 118 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-------------------------------- 118 (658)
+++.|++++|.+ |.+|+++++|++|++|+|++|.+.|.+|.++++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~ 90 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELP 90 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCc
Confidence 455566666666 55666666666666666666666655665555443
Q ss_pred -CCCEEEccCCcCCCCCcccccC----------------C-cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 119 -RLKILDLGTNQLTGPIPPEIGN----------------L-TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 119 -~L~~L~Ls~N~l~g~~p~~~~~----------------l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
+|++|++++|++++ +|..+.+ + ++|++|+|++|++++ +| .|+++++|++|++++|++++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~ 167 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK 167 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC
T ss_pred CCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc
Confidence 34555555555543 3432211 1 244445555555543 44 35555555555555555543
Q ss_pred cCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccCcccCCCCCCCccCCCccC
Q 006178 181 AVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245 (658)
Q Consensus 181 ~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ip~~l~~l~~~~~~~n~~~ 245 (658)
+|... .++..++++.|.+++ +.++++|+.|++++|.+++ +|....++..+++++|.+.
T Consensus 168 -lp~~~-----~~L~~L~L~~n~l~~l~~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 168 -LPDLP-----PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp -CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCS
T ss_pred -cCCCc-----ccccEEECcCCcCCcCccccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCC
Confidence 33321 234444455554433 2344555555555555553 4444444555555555443
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-15 Score=164.47 Aligned_cols=155 Identities=28% Similarity=0.281 Sum_probs=126.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 57899999999998 466 568999999999999997 777 665 99999999999996 776 6899999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCC-CC-------cEEEccCC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS-QL-------KVADFSYN 221 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~-~L-------~~l~ls~N 221 (658)
++|.|++ +|. .+++|++|+|++|+|++ +|. .. .++..+++++|.++.+..+. +| +.|+|++|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~----~~L~~L~Ls~N~L~~lp~~~~~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP----ESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCREN 217 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC----TTCCEEECCSSCCSSCCCCC--------CCEEEECCSS
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh----CCCCEEECcCCCCCchhhHHHhhhcccccceEEecCCC
Confidence 9999996 776 67899999999999996 776 22 67888999999887654322 56 99999999
Q ss_pred cCcccCcccCCCCC---CCccCCCccCCC
Q 006178 222 FFVGSIPKCLEYLP---STSFQGNCLQNK 247 (658)
Q Consensus 222 ~l~g~ip~~l~~l~---~~~~~~n~~~~~ 247 (658)
+|+ .+|..+..++ .+++++|.+.+.
T Consensus 218 ~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 218 RIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp CCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred cce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 999 6887665554 567888977664
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.6e-16 Score=168.07 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=89.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-CCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (658)
..++.|+|++|.+++..+. .+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++.+|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 4677888888888876543 467889999999999988888888899999999999999888888876 789999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|++|.|++. |. +..+++|+.|+|++|++++.+|
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH
Confidence 999999865 33 4468899999999999986444
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.6e-15 Score=150.96 Aligned_cols=163 Identities=23% Similarity=0.328 Sum_probs=107.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|++++|.++.. +.+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ +| .+..+++|+.|+|+
T Consensus 47 ~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 567777777777654 347777777777777777776443 7777777777777777764 33 47777777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|++++ + +.+..+++|++|++++|++++. +. .....++..+++++|.+++ +..+++|+.|++++|.+++ +
T Consensus 121 ~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~---l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l 193 (291)
T 1h6t_A 121 HNGISD-I-NGLVHLPQLESLYLGNNKITDI-TV---LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-L 193 (291)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GG---GGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-C
T ss_pred CCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hh---hccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-C
Confidence 777775 3 4577777777777777777643 21 1122456666777776654 4567788888888888874 4
Q ss_pred cc--cCCCCCCCccCCCccCC
Q 006178 228 PK--CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 228 p~--~l~~l~~~~~~~n~~~~ 246 (658)
|. .+.+|..+++++|.+..
T Consensus 194 ~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 194 RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGGTTCTTCSEEEEEEEEEEC
T ss_pred hhhccCCCCCEEECcCCcccC
Confidence 43 12334445667775544
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-15 Score=156.91 Aligned_cols=189 Identities=13% Similarity=0.146 Sum_probs=141.3
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCc-ccCCCCCCCE-EEcc
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKI-LDLG 126 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~-L~Ls 126 (658)
|.|..|.|++. ...++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.++++|.. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 68889999641 24688999999999986666899999999999999998776664 6888988775 6777
Q ss_pred CCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCC-CCcccCCCCCCCCccccccccccCCCCcc
Q 006178 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN-RLQGAVPAGSNSGYTANIHGMYASSANLT 205 (658)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N-~l~g~~p~~~~~~~~~~l~~~~l~~n~l~ 205 (658)
.|+++...|..|..+++|++|++++|++++..+..+....++..|++.++ ++. .+|..........+..++++.|.++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccccc
Confidence 89999777888999999999999999999766666777778888888664 454 5665544444445666778888776
Q ss_pred ccc----CCCCCcEEEccCCcCcccCccc-C---CCCCCCccCCCccCCC
Q 006178 206 GLC----HLSQLKVADFSYNFFVGSIPKC-L---EYLPSTSFQGNCLQNK 247 (658)
Q Consensus 206 ~~~----~l~~L~~l~ls~N~l~g~ip~~-l---~~l~~~~~~~n~~~~~ 247 (658)
.+. ...+|+.+++++|+..+.||.. + .+|..+++++|.++..
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 532 3456788888765444466642 3 4456677888877664
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.2e-15 Score=142.10 Aligned_cols=130 Identities=18% Similarity=0.237 Sum_probs=111.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. ++.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..++.+++|+.|+|
T Consensus 66 ~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 478999999997653 468999999999999999999888999999999999999999999888999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
++|.+.+.+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~----------------------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR----------------------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT----------------------TGGGCSSCCEEEECBC----
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH----------------------HhccCCCCCEEEeeCcccCC
Confidence 9998444677 79999999999999999984 32 25567889999999998864
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-15 Score=168.52 Aligned_cols=155 Identities=29% Similarity=0.348 Sum_probs=96.0
Q ss_pred CCCCCCCCCCCCCCcccee--------ecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCC
Q 006178 46 VLSNWNALDADPCHWTGIA--------CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117 (658)
Q Consensus 46 ~l~~w~~~~~~~c~w~gv~--------C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 117 (658)
.+..|.. +.+||.|.|.. |. ...++.|++++|+|+ .+|..+. ++|+.|+|++|+++ .+|. .+
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~--~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACL--NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHH--HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHHh-cCCcchhccccccCccccccc--CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 3456754 45688887643 32 234777888888887 5666655 77888888888887 4555 46
Q ss_pred CCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCcccccccc
Q 006178 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197 (658)
Q Consensus 118 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~ 197 (658)
++|++|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. .+++|+.|++++|++++ +|... .++..+
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l-----~~L~~L 146 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLP-----PGLQEL 146 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCC-----TTCCEE
T ss_pred CCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCC-----CCCCEE
Confidence 77888888888887 4665 56777788888877774 444 45667777777777663 44321 344555
Q ss_pred ccCCCCccccc-CCCCCcEEEccCCcCc
Q 006178 198 YASSANLTGLC-HLSQLKVADFSYNFFV 224 (658)
Q Consensus 198 ~l~~n~l~~~~-~l~~L~~l~ls~N~l~ 224 (658)
++++|.++++. .+.+|+.|++++|.++
T Consensus 147 ~Ls~N~l~~l~~~~~~L~~L~L~~N~l~ 174 (622)
T 3g06_A 147 SVSDNQLASLPALPSELCKLWAYNNQLT 174 (622)
T ss_dssp ECCSSCCSCCCCCCTTCCEEECCSSCCS
T ss_pred ECcCCcCCCcCCccCCCCEEECCCCCCC
Confidence 55555554432 1233344444444433
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.58 E-value=6.1e-15 Score=159.94 Aligned_cols=165 Identities=25% Similarity=0.390 Sum_probs=74.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc---------------
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP--------------- 135 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p--------------- 135 (658)
+++.|++++|.+++..| ++.+++|+.|+|++|.+++. ..+..+++|+.|++++|.+++..|
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n 275 (466)
T 1o6v_A 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGAN 275 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSS
T ss_pred CCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCC
Confidence 45555555555555333 44455555555555554431 234444455555555555443222
Q ss_pred ------ccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---
Q 006178 136 ------PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (658)
Q Consensus 136 ------~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--- 206 (658)
. +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..|- .....+..+++++|.+++
T Consensus 276 ~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~----~~l~~L~~L~l~~n~l~~~~~ 348 (466)
T 1o6v_A 276 QISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPV----SSLTKLQRLFFYNNKVSDVSS 348 (466)
T ss_dssp CCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGG----GGCTTCCEEECCSSCCCCCGG
T ss_pred ccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhh----ccCccCCEeECCCCccCCchh
Confidence 2 4444444455554444443222 44445555555555554443331 112334444555554443
Q ss_pred ccCCCCCcEEEccCCcCcccCc-ccCCCCCCCccCCCccCC
Q 006178 207 LCHLSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 207 ~~~l~~L~~l~ls~N~l~g~ip-~~l~~l~~~~~~~n~~~~ 246 (658)
+..+++|+.|++++|++++.+| ..+.++..+.+.+|.+.+
T Consensus 349 l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 349 LANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred hccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 3344555555555555555544 112223334445554443
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=156.30 Aligned_cols=159 Identities=22% Similarity=0.257 Sum_probs=94.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++ +| ++++++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECC
Confidence 566777777777763 3 567777777777777777653 3 6677777777777777765 33 6677777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcc---cccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~---~~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|++++ +| ++.+++|++|++++|++++ +|-. ....+..++++.|... .+..+++|+.|++++|++++ +
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~l~----~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l 185 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTE-IDVS----HNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-L 185 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSC-CCCT----TCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-C
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccce-eccc----cCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-e
Confidence 777775 44 6677777777777777765 3311 1234455555555321 23445556666666666654 2
Q ss_pred c-ccCCCCCCCccCCCccCC
Q 006178 228 P-KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 228 p-~~l~~l~~~~~~~n~~~~ 246 (658)
| ..+.++..+.+++|.+.+
T Consensus 186 ~l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 186 DVSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp CCTTCTTCCEEECCSSCCSC
T ss_pred ccccCCCCCEEECcCCcCCe
Confidence 3 222333444555554444
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-14 Score=155.47 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=92.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++. | ++.+++|++|+|++|.+++. | ++.+++|++|+|++|++++ +| ++.+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 4677888888888874 3 78888888888888888863 3 7788888888888888875 44 778888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc--ccCCCCCcEEEccCCcCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--~~~l~~L~~l~ls~N~l~g 225 (658)
++|++++ +| ++++++|++|++++|+..+.++-.. ...+..++++.|.+++ +..+++|+.|++++|.+++
T Consensus 135 ~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~----l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 135 ARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTP----QTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp TTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTT----CTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSC
T ss_pred CCCccce-ec--cccCCcCCEEECCCCCccccccccc----CCcCCEEECCCCccceeccccCCCCCEEECcCCcCCe
Confidence 8888876 33 6667777777777775555543211 1344444555554443 2233444444444444443
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.58 E-value=6.7e-15 Score=149.01 Aligned_cols=145 Identities=26% Similarity=0.364 Sum_probs=125.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 579999999999998544 9999999999999999986 44 49999999999999999985 4 57899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++. ..+..+++|++|+|++|++++..| .....++..+++++|.++. +..+++|+.|++++|.++..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~----l~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP----LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh----hcCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccCC
Confidence 99999964 679999999999999999997655 1223578889999998875 56788999999999999853
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=161.23 Aligned_cols=145 Identities=26% Similarity=0.365 Sum_probs=111.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|+.|+|++|.+.+ +| .+..|++|+.|+|++|++++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 468888888888887544 8888888888888888875 34 68888888888888888885 3 45888888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|.+++. ..+..|++|+.|+|++|++++..|- ....+|..++++.|.+++ +..+++|+.|+|++|.+++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l----~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL----AGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGG----TTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhh----ccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 88888864 5788888888888888888876551 123466777777777654 45567788888888877754
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.5e-16 Score=176.58 Aligned_cols=112 Identities=29% Similarity=0.432 Sum_probs=105.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|||++|.|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 457889999999998 68888999999999999999999 89999999999999999999999 8899999999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
|++|.|+ .+|..|++|++|++|+|++|+|+|.+|.
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 9999998 7899999999999999999999988875
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-14 Score=154.97 Aligned_cols=159 Identities=27% Similarity=0.323 Sum_probs=121.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|++++|.+++ +|. ..++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 456666666666665 221 12689999999999986 77 58999999999999999985 67544 58999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++ +| .++++++|++|++++|++++ +|... ..+..+++++|.++. +..+++|+.|++++|++++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-----~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~- 251 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT- 251 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-----CcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCc-
Confidence 9999996 67 68999999999999999985 55422 356677777777654 4567788888888888885
Q ss_pred CcccCCCCCCCccCCCccCCC
Q 006178 227 IPKCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 227 ip~~l~~l~~~~~~~n~~~~~ 247 (658)
+|..+.++..+++++|.+.+.
T Consensus 252 l~~~~~~L~~L~l~~N~l~~l 272 (454)
T 1jl5_A 252 LPDLPPSLEALNVRDNYLTDL 272 (454)
T ss_dssp CCSCCTTCCEEECCSSCCSCC
T ss_pred ccccccccCEEECCCCccccc
Confidence 676677788888888877663
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.56 E-value=5e-15 Score=133.91 Aligned_cols=123 Identities=21% Similarity=0.230 Sum_probs=105.3
Q ss_pred CCCCCcEEeccCCccc-ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCE
Q 006178 92 LLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (658)
Q Consensus 92 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (658)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 88999999999999999999999965 78999999999999999999889999999999999
Q ss_pred EeCCCCCCccc-CCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc---ccCCCCCCC
Q 006178 171 LHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEYLPST 237 (658)
Q Consensus 171 L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip---~~l~~l~~~ 237 (658)
|++++|++++. .| ..+..+++|+.|++++|.+++..+ ..+..++.+
T Consensus 93 L~ls~N~i~~~~~~---------------------~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L 142 (149)
T 2je0_A 93 LNLSGNKIKDLSTI---------------------EPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQL 142 (149)
T ss_dssp EECTTSCCCSHHHH---------------------GGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTC
T ss_pred EECCCCcCCChHHH---------------------HHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCc
Confidence 99999999853 11 235678899999999999997665 345544443
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1e-14 Score=134.84 Aligned_cols=131 Identities=22% Similarity=0.173 Sum_probs=109.3
Q ss_pred CCCCCcEEeccCCccc-ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCE
Q 006178 92 LLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (658)
Q Consensus 92 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (658)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4588999999999998 78999999999999999999999965 78999999999999999999889999999999999
Q ss_pred EeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc---ccCCC---CCCCccCCCcc
Q 006178 171 LHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEY---LPSTSFQGNCL 244 (658)
Q Consensus 171 L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip---~~l~~---l~~~~~~~n~~ 244 (658)
|+|++|++++. |. +..+..+++|+.|++++|.+++..+ ..+.. |..+++.+|.+
T Consensus 100 L~Ls~N~l~~~-~~-------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 100 LNLSGNKLKDI-ST-------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EECBSSSCCSS-GG-------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeccCCccCcc-hh-------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 99999999853 21 0235678899999999999996655 34444 44556666643
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-14 Score=149.78 Aligned_cols=169 Identities=24% Similarity=0.289 Sum_probs=124.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 3468888999888876543 8888889999999888875433 7788888888888888875433 77888888888
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
|++|.+++ +|. +..+++|++|++++|.+++ ++. .....++..+++++|.+++ +..+++|+.|++++|.+++
T Consensus 228 l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~---~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKITD-LSP-LANLSQLTWLEIGTNQISD-INA---VKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG---GTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-Chh---HhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCC
Confidence 88888885 444 8888888888888888875 332 1123466777788877765 4567788888888888887
Q ss_pred cCcccCC---CCCCCccCCCccCCCCc
Q 006178 226 SIPKCLE---YLPSTSFQGNCLQNKDP 249 (658)
Q Consensus 226 ~ip~~l~---~l~~~~~~~n~~~~~~~ 249 (658)
..|..+. +|..+++++|.+....|
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred cChhHhhccccCCEEEccCCccccccC
Confidence 7776554 44556778887766543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=7.5e-15 Score=162.11 Aligned_cols=109 Identities=26% Similarity=0.268 Sum_probs=101.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|+.|++|++|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47789999999998 565 999999999999999999 789999999999999999999996 78 89999999999999
Q ss_pred cccCCCCC-hhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 151 SNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 151 ~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
+|+|++.. |..|++|++|+.|+|++|++++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999876 99999999999999999999976653
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=161.07 Aligned_cols=166 Identities=23% Similarity=0.327 Sum_probs=136.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+... +.+..|++|+.|+|++|++.+..| +..|++|+.|+|++|.|++ +| .+..+++|+.|+
T Consensus 42 L~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 34688899999999864 369999999999999999997655 8999999999999999985 44 799999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
|++|.+++ + +.+..|++|+.|+|++|++++. +. .....+|..++++.|.+++ +..+++|+.|+|++|.|++
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~---l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TV---LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GG---GGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hh---hcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC
Confidence 99999996 4 4699999999999999999864 32 1223578888999998876 4678899999999999986
Q ss_pred cCcc--cCCCCCCCccCCCccCCC
Q 006178 226 SIPK--CLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 226 ~ip~--~l~~l~~~~~~~n~~~~~ 247 (658)
+|. .+.+|..|++++|.+...
T Consensus 190 -l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 190 -LRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -CGGGTTCTTCSEEECCSEEEECC
T ss_pred -ChHHccCCCCCEEEccCCcCcCC
Confidence 442 234555677888876653
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=163.39 Aligned_cols=176 Identities=19% Similarity=0.212 Sum_probs=115.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+..++++.+.+.+ ++..+..++.|+.++++.|++....+ ..+..+++|+.++++.|.+.+..|..+..+++|+.|+|
T Consensus 398 ~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~L 476 (635)
T 4g8a_A 398 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 476 (635)
T ss_dssp CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred hhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 45666666666654 34456666667777766666554433 34566666666666666666666666666666666666
Q ss_pred ccccCC-CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 150 QSNGLT-GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 150 s~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
++|.+. +.+|..|..+++|++|+|++|++++.+|..... ..+++.+++++|++++ +.++++|++|||++|+|
T Consensus 477 s~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~--l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 477 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS--LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhcccccccCchhhhhccccCEEECCCCccCCcChHHHcC--CCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 666533 345556666666666666666666555543211 2355566666666654 45688999999999999
Q ss_pred cccCcccCCCC----CCCccCCCccCCCCc
Q 006178 224 VGSIPKCLEYL----PSTSFQGNCLQNKDP 249 (658)
Q Consensus 224 ~g~ip~~l~~l----~~~~~~~n~~~~~~~ 249 (658)
++..|..+..+ ..+++++|.+...|.
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999887654 457889998887653
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=132.19 Aligned_cols=107 Identities=30% Similarity=0.324 Sum_probs=94.8
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.|++++|.++. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 57778888876 66655 3899999999999999889999999999999999999997666678999999999999999
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 154 LTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|++..|..|.++++|++|+|++|.++...+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 997777779999999999999999985543
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.54 E-value=5.1e-15 Score=151.95 Aligned_cols=158 Identities=18% Similarity=0.142 Sum_probs=115.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-CCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (658)
..++.|++++|.+++..+. .+++|++|+|++|++++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4678888888888876543 367899999999999988788888899999999999999877677664 789999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~ 224 (658)
|++|.+++. |. ...+++|++|+|++|++++..+. . ....++..+++++|.++. +..+++|+.|++++|.++
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~-~--~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-F--QSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-G--GGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCB
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcchhh-h--cccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCcc
Confidence 999999854 43 34588999999999999854332 1 112455566666666553 334566777777777776
Q ss_pred -ccCcccCCCCC
Q 006178 225 -GSIPKCLEYLP 235 (658)
Q Consensus 225 -g~ip~~l~~l~ 235 (658)
+.+|..+..++
T Consensus 251 ~~~~~~~~~~~~ 262 (317)
T 3o53_A 251 CGTLRDFFSKNQ 262 (317)
T ss_dssp HHHHHHHHHTCH
T ss_pred CcCHHHHHhccc
Confidence 55555555443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-14 Score=142.22 Aligned_cols=142 Identities=25% Similarity=0.328 Sum_probs=101.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. ++ .+..+++|++|+|++|++++..| +..+++|++|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 468889999999886 44 78899999999999999987544 8999999999999999985 55433 3 89999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~ 224 (658)
++|++++ +| .+..+++|+.|+|++|++++. |. .....++..+++++|.+++ +..+++|+.|++++|.++
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~---l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VM---LGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GG---GGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEE
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hH---HccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCccc
Confidence 9999986 44 588999999999999999853 31 1111234444444444432 233444555555555544
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.3e-14 Score=153.25 Aligned_cols=167 Identities=26% Similarity=0.399 Sum_probs=136.9
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.|++++|.+++. +.+..+++|++|++++|.+.+..| ++.+++|+.|++++|++++ + ..+..+++|+.|+
T Consensus 176 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 249 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLD 249 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEE
Confidence 35789999999999874 458999999999999999998665 7889999999999999985 4 4688999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
+++|.+++..| +..+++|++|++++|++++..|- .....+..+++++|.+.+ +..+++|+.|++++|++++
T Consensus 250 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~----~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 250 LANNQISNLAP--LSGLTKLTELKLGANQISNISPL----AGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGG----TTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred CCCCccccchh--hhcCCCCCEEECCCCccCccccc----cCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCC
Confidence 99999997554 89999999999999999865441 123567778888888775 4567889999999999987
Q ss_pred cCc-ccCCCCCCCccCCCccCCC
Q 006178 226 SIP-KCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 226 ~ip-~~l~~l~~~~~~~n~~~~~ 247 (658)
..| ..+.+|..+++.+|.+.+.
T Consensus 324 ~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 324 ISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CGGGGGCTTCCEEECCSSCCCCC
T ss_pred chhhccCccCCEeECCCCccCCc
Confidence 766 2345566678888877664
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.7e-16 Score=164.44 Aligned_cols=41 Identities=22% Similarity=0.040 Sum_probs=19.8
Q ss_pred cCCCCCcEEeccCCcccc----cCCcccCCCCCCCEEEccCCcCC
Q 006178 91 GLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.++
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 344555555555555444 24444444455555555555443
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.3e-14 Score=130.66 Aligned_cols=106 Identities=25% Similarity=0.266 Sum_probs=93.9
Q ss_pred EEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 73 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
+.+++++|.++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 468999999954 777664 89999999999999988999999999999999999999755556789999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCccc
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGA 181 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 181 (658)
+|++..+..|..+++|++|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99976666699999999999999999743
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.2e-14 Score=146.31 Aligned_cols=168 Identities=23% Similarity=0.319 Sum_probs=132.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|++++|...+.++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++ ++. +..+++|+.|+
T Consensus 131 l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 205 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFT 205 (347)
T ss_dssp CTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceee
Confidence 35788999999976665544 8999999999999999886544 8889999999999999984 444 88899999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
+++|.+++..+ +..+++|++|++++|++++..+ .....++..+++++|.++. +..+++|+.|++++|.+++
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~----~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSP----LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcc----hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCC
Confidence 99999986444 8899999999999999985443 1223567788888888765 5578899999999999986
Q ss_pred cCcc--cCCCCCCCccCCCccCCCC
Q 006178 226 SIPK--CLEYLPSTSFQGNCLQNKD 248 (658)
Q Consensus 226 ~ip~--~l~~l~~~~~~~n~~~~~~ 248 (658)
. |. .+.++..+++++|.+....
T Consensus 280 ~-~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 280 I-SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCGGG
T ss_pred C-hhhcCCCCCCEEECcCCcCCCcC
Confidence 4 42 3456677888888776543
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.9e-14 Score=134.06 Aligned_cols=132 Identities=23% Similarity=0.252 Sum_probs=107.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCC-CCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..++.|+|++|.++. +| .+..+. +|++|+|++|.+++. ..|..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 368999999999996 44 455555 999999999999975 5799999999999999999954444458999999999
Q ss_pred cccccCCCCChh--hhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCc
Q 006178 149 LQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 149 Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~ 224 (658)
|++|.++ .+|. .+..+++|+.|++++|.++ .+|... ...+..+++|+.||++.|...
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~-----------------~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYR-----------------LYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHH-----------------HHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHH-----------------HHHHHHCCccceeCCCcCCHH
Confidence 9999996 6776 8999999999999999997 444310 001456788999999999764
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-15 Score=160.17 Aligned_cols=177 Identities=22% Similarity=0.272 Sum_probs=137.9
Q ss_pred CCEEEEEecCCCCcccC----CccccCCCCCcEEeccCC---cccccCCccc-------CCCCCCCEEEccCCcCCC---
Q 006178 70 DRVLKINISGSSLKGFL----APELGLLTYLQELILHGN---NLIGIIPKEL-------GLLKRLKILDLGTNQLTG--- 132 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~----~~~~~~l~~L~~L~L~~N---~l~g~~p~~~-------~~l~~L~~L~Ls~N~l~g--- 132 (658)
.+++.|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 46899999999998763 345778999999999995 5666777655 789999999999999997
Q ss_pred -CCcccccCCcccceeecccccCCCCChhhhc----CC---------CCCCEEeCCCCCCc-ccCCCCC-CCCccccccc
Q 006178 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELG----NL---------ISLEELHLDRNRLQ-GAVPAGS-NSGYTANIHG 196 (658)
Q Consensus 133 -~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l---------~~L~~L~L~~N~l~-g~~p~~~-~~~~~~~l~~ 196 (658)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+|... ......++..
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4788899999999999999999754444444 44 89999999999997 4444200 0001236778
Q ss_pred cccCCCCcc----------cccCCCCCcEEEccCCcCc----ccCcccCC---CCCCCccCCCccCC
Q 006178 197 MYASSANLT----------GLCHLSQLKVADFSYNFFV----GSIPKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 197 ~~l~~n~l~----------~~~~l~~L~~l~ls~N~l~----g~ip~~l~---~l~~~~~~~n~~~~ 246 (658)
+++++|.++ .+..+++|+.|+|++|.++ +.+|..+. +|..+++++|.+..
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 899999887 5668899999999999996 67776654 55667888886654
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.5e-15 Score=156.24 Aligned_cols=176 Identities=19% Similarity=0.206 Sum_probs=100.7
Q ss_pred CEEEEEecCCCCcccCC----ccccCCC-CCcEEeccCCcccccCCcccCCC-----CCCCEEEccCCcCCCCCcccccC
Q 006178 71 RVLKINISGSSLKGFLA----PELGLLT-YLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIGN 140 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~ 140 (658)
.++.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46777777777766554 4556666 67777777777766655555553 67777777777776555554333
Q ss_pred ----C-cccceeecccccCCCCChhhhcC-----CCCCCEEeCCCCCCcccCCCCCC---CCccccccccccCCCCcccc
Q 006178 141 ----L-TGLVKINLQSNGLTGRLPAELGN-----LISLEELHLDRNRLQGAVPAGSN---SGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 141 ----l-~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~L~~N~l~g~~p~~~~---~~~~~~l~~~~l~~n~l~~~ 207 (658)
+ ++|+.|+|++|.+++..+..+.. .++|++|+|++|++++..+.... ......+..+++++|.+++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 3 66777777777776655544432 25777777777776632211000 00112455566666666432
Q ss_pred ---------cCC-CCCcEEEccCCcCccc----CcccC----CCCCCCccCCCccCC
Q 006178 208 ---------CHL-SQLKVADFSYNFFVGS----IPKCL----EYLPSTSFQGNCLQN 246 (658)
Q Consensus 208 ---------~~l-~~L~~l~ls~N~l~g~----ip~~l----~~l~~~~~~~n~~~~ 246 (658)
... ++|+.|||++|.++.. +|..+ .+|..+++++|.+..
T Consensus 183 ~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 183 NCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred hHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 123 4666677776666642 33322 245556666665444
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.7e-15 Score=156.87 Aligned_cols=170 Identities=19% Similarity=0.156 Sum_probs=114.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCccccc-CCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777775544 55678888888888887765 677777788888888888887777777777788888888
Q ss_pred cccc-cCCC-CChhhhcCCCCCCEEeCCCC-CCccc-CCCCCCCCccc-cccccccCCCC--cc------cccCCCCCcE
Q 006178 149 LQSN-GLTG-RLPAELGNLISLEELHLDRN-RLQGA-VPAGSNSGYTA-NIHGMYASSAN--LT------GLCHLSQLKV 215 (658)
Q Consensus 149 Ls~N-~l~g-~~p~~~~~l~~L~~L~L~~N-~l~g~-~p~~~~~~~~~-~l~~~~l~~n~--l~------~~~~l~~L~~ 215 (658)
|++| .+++ .+|..+.++++|++|+|++| .+++. ++... .... ++..+++++|. ++ .+.++++|+.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~--~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~ 226 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV--AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 226 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH--HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH--HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCE
Confidence 8887 5665 26666777888888888888 77643 22210 0112 56667777773 33 1345677888
Q ss_pred EEccCCc-CcccCcccCCC---CCCCccCCC
Q 006178 216 ADFSYNF-FVGSIPKCLEY---LPSTSFQGN 242 (658)
Q Consensus 216 l~ls~N~-l~g~ip~~l~~---l~~~~~~~n 242 (658)
|++++|. +++..+..+.. |..+++++|
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 8888877 66565655443 344555655
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.48 E-value=6e-14 Score=137.68 Aligned_cols=169 Identities=20% Similarity=0.179 Sum_probs=144.8
Q ss_pred CCCEEEEEecCCC-CcccCCccccCCCCCcEEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccc-
Q 006178 69 RDRVLKINISGSS-LKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV- 145 (658)
Q Consensus 69 ~~~v~~l~L~~n~-l~g~~~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 145 (658)
..+++.|+|++|. +++..+..|..+++|++|+|++ |++++..+..|.++++|++|+|++|.+++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3579999999997 8887777899999999999999 99998878889999999999999999995 776 88899998
Q ss_pred --eeecccc-cCCCCChhhhcCCCCCC-EEeCCCCCCcccCCCCCCCCccccccccccCCCC-ccc-----ccCC-CCCc
Q 006178 146 --KINLQSN-GLTGRLPAELGNLISLE-ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN-LTG-----LCHL-SQLK 214 (658)
Q Consensus 146 --~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~-l~~-----~~~l-~~L~ 214 (658)
.|++++| .+++..+..|.++++|+ +|++++|+++ .+|...... ..+..+++++|. ++. +..+ ++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~--~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~ 208 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG--TKLDAVYLNKNKYLTVIDKDAFGGVYSGPS 208 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT--CEEEEEECTTCTTCCEECTTTTTTCSBCCS
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC--CCCCEEEcCCCCCcccCCHHHhhccccCCc
Confidence 9999999 99977777799999999 9999999999 777754443 578889999994 764 4567 8999
Q ss_pred EEEccCCcCcccCcccCCCCCCCccCCC
Q 006178 215 VADFSYNFFVGSIPKCLEYLPSTSFQGN 242 (658)
Q Consensus 215 ~l~ls~N~l~g~ip~~l~~l~~~~~~~n 242 (658)
.|++++|++++..+..+.+++.+.+.++
T Consensus 209 ~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 209 LLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp EEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred EEECCCCccccCChhHhccCceeeccCc
Confidence 9999999999655556778887777654
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-13 Score=151.05 Aligned_cols=53 Identities=30% Similarity=0.394 Sum_probs=27.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCC
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
+++.|+|++|.++. +|. .+++|++|+|++|++++ +|. .+++|++|+|++|+++
T Consensus 62 ~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~ 114 (622)
T 3g06_A 62 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLT 114 (622)
T ss_dssp TCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCC
T ss_pred CCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCC
Confidence 45556666665553 333 34555555555555553 333 3445555555555554
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.48 E-value=8.3e-14 Score=138.66 Aligned_cols=161 Identities=23% Similarity=0.293 Sum_probs=126.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.++++++.+++.. .+..+++|+.|++++|.++. +| .+..+++|++|+|++|++++ +|. +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECC
Confidence 3456677888887643 68899999999999999984 66 78999999999999999995 454 9999999999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|++++ +|.. .. ++|++|+|++|++++ +|. .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 94 ~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~~---l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TDS---LIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SGG---GTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcc-cc-CcccEEEccCCccCC-Chh---hcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch-
Confidence 999995 5543 33 999999999999986 342 1223577788899988875 45678899999999999876
Q ss_pred cccCC---CCCCCccCCCccCC
Q 006178 228 PKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 228 p~~l~---~l~~~~~~~n~~~~ 246 (658)
..+. +|..+++++|.+..
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEEC
T ss_pred -HHhccCCCCCEEeCCCCcccC
Confidence 3444 44556777776554
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-16 Score=151.69 Aligned_cols=134 Identities=22% Similarity=0.297 Sum_probs=112.8
Q ss_pred CEEEEEecCCCCcccCCc------cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCccc
Q 006178 71 RVLKINISGSSLKGFLAP------ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~------~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (658)
+++.++++.+.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455666777777777766 89999999999999999997 77 8999999999999999998 789888888999
Q ss_pred ceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCc
Q 006178 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~ 224 (658)
+.|+|++|++++ +| .+..+++|++|+|++|++++..+ +..+..+++|++|++++|.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~--------------------~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE--------------------IDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH--------------------HHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH--------------------HHHHhcCCCCCEEEecCCccc
Confidence 999999999996 66 68999999999999999874211 013556889999999999998
Q ss_pred ccCcc
Q 006178 225 GSIPK 229 (658)
Q Consensus 225 g~ip~ 229 (658)
+.+|.
T Consensus 154 ~~~~~ 158 (198)
T 1ds9_A 154 NDYKE 158 (198)
T ss_dssp HHHHT
T ss_pred ccccc
Confidence 88765
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.47 E-value=2.4e-13 Score=125.76 Aligned_cols=109 Identities=23% Similarity=0.254 Sum_probs=94.3
Q ss_pred CcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCC
Q 006178 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (658)
Q Consensus 96 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 175 (658)
.+.|++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999985 777664 8999999999999988899999999999999999999977777789999999999999
Q ss_pred CCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
|+|++..+. .+..+++|+.|+|++|.|++..+
T Consensus 88 N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRG---------------------AFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTT---------------------TTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHH---------------------HhcCCCCCCEEEeCCCCCCCCch
Confidence 999954432 24567889999999999986543
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.9e-15 Score=155.09 Aligned_cols=172 Identities=17% Similarity=0.140 Sum_probs=99.7
Q ss_pred EEecCCCCcccCCccccCCCCCcEEeccCCcccccCC----cccCCCC-CCCEEEccCCcCCCCCcccccCC-----ccc
Q 006178 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP----KELGLLK-RLKILDLGTNQLTGPIPPEIGNL-----TGL 144 (658)
Q Consensus 75 l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L 144 (658)
.+|+.|+++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666766666666666667777777777665544 5556666 67777777777666555555554 667
Q ss_pred ceeecccccCCCCChhhhcC----C-CCCCEEeCCCCCCcccCCCCCCC---CccccccccccCCCCccc---------c
Q 006178 145 VKINLQSNGLTGRLPAELGN----L-ISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG---------L 207 (658)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~L~~N~l~g~~p~~~~~---~~~~~l~~~~l~~n~l~~---------~ 207 (658)
+.|+|++|.+++..+..++. + ++|++|+|++|++++..+..... .....+..+++++|.++. +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 77777777776655554333 2 66777777777665433211100 001255566666666652 1
Q ss_pred cCCC-CCcEEEccCCcCcccCcccC--------CCCCCCccCCCccCC
Q 006178 208 CHLS-QLKVADFSYNFFVGSIPKCL--------EYLPSTSFQGNCLQN 246 (658)
Q Consensus 208 ~~l~-~L~~l~ls~N~l~g~ip~~l--------~~l~~~~~~~n~~~~ 246 (658)
..+. +|+.|+|++|.+++..+..+ .+|..+++++|.+..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 2233 66777777776665554321 245556666665554
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.45 E-value=8.4e-15 Score=151.58 Aligned_cols=171 Identities=19% Similarity=0.189 Sum_probs=129.5
Q ss_pred CCEEEEEecCCCCccc-CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC-cCCCC-CcccccCCcccce
Q 006178 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGP-IPPEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~-~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 146 (658)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.++++|+.
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5789999999998876 7888899999999999999999888888999999999999999 67753 6777888999999
Q ss_pred eecccc-cCCCC-ChhhhcCCC-CCCEEeCCCC--CCc-ccCCCCCCCCccccccccccCCCC-cc-----cccCCCCCc
Q 006178 147 INLQSN-GLTGR-LPAELGNLI-SLEELHLDRN--RLQ-GAVPAGSNSGYTANIHGMYASSAN-LT-----GLCHLSQLK 214 (658)
Q Consensus 147 L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~L~~N--~l~-g~~p~~~~~~~~~~l~~~~l~~n~-l~-----~~~~l~~L~ 214 (658)
|+|++| .+++. +|..+..++ +|++|+|++| .++ +.+|... ....++..+++++|. ++ .+..+++|+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~--~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLV--RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHH--HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHH--hhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 999999 88864 677888999 9999999999 455 3343311 112466777777777 43 356778899
Q ss_pred EEEccCCc-CcccCccc---CCCCCCCccCCC
Q 006178 215 VADFSYNF-FVGSIPKC---LEYLPSTSFQGN 242 (658)
Q Consensus 215 ~l~ls~N~-l~g~ip~~---l~~l~~~~~~~n 242 (658)
.|++++|. ++...... +.+|..+++.+|
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 99999885 22211112 345556677776
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-13 Score=150.74 Aligned_cols=107 Identities=27% Similarity=0.322 Sum_probs=57.8
Q ss_pred CcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCC
Q 006178 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (658)
Q Consensus 96 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 175 (658)
|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +| .+++|++|++|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4445555555553 343 555555555555555555 455555555555555555555553 44 455555555555555
Q ss_pred CCCcccC-CCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 176 NRLQGAV-PAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 176 N~l~g~~-p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
|+|++.+ |. .+..+++|+.|+|++|.|++.+|
T Consensus 518 N~l~~~~~p~---------------------~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQ---------------------PLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTG---------------------GGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcH---------------------HHhcCCCCCEEEecCCcCCCCcc
Confidence 5555433 32 23456667777777777765544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.9e-13 Score=142.14 Aligned_cols=108 Identities=25% Similarity=0.260 Sum_probs=94.4
Q ss_pred CCccceeecCCCCCEEEEEecCC-CCcccCCccccCCCCCcEEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCc
Q 006178 58 CHWTGIACSDARDRVLKINISGS-SLKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (658)
Q Consensus 58 c~w~gv~C~~~~~~v~~l~L~~n-~l~g~~~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (658)
|.|..|.|+ ++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|
T Consensus 8 C~~~~v~~~------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECC------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcC------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 777777775 44 6766 777 99999999999996 99999888899999999999999999999888
Q ss_pred ccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|.|..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8999999999999999999975555566665 9999999999873
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.44 E-value=5.9e-13 Score=123.52 Aligned_cols=106 Identities=24% Similarity=0.276 Sum_probs=91.8
Q ss_pred cEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCC
Q 006178 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (658)
Q Consensus 97 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 176 (658)
+.+++++|++. .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999996 6787665 89999999999999888999999999999999999999766666799999999999999
Q ss_pred CCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCccc
Q 006178 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ 226 (658)
+|++ +|.. .+..+++|+.|+|++|.|...
T Consensus 92 ~l~~-l~~~--------------------~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKS-IPRG--------------------AFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCC-CCTT--------------------TTTTCTTCSEEECCSSCBCTT
T ss_pred ccce-eCHH--------------------HhccccCCCEEEeCCCCcccc
Confidence 9984 4431 255678999999999999844
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.38 E-value=6.2e-13 Score=123.75 Aligned_cols=131 Identities=20% Similarity=0.134 Sum_probs=103.6
Q ss_pred ccccCCCCCcEEeccCCcccccCCcccCCCC-CCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCC
Q 006178 88 PELGLLTYLQELILHGNNLIGIIPKELGLLK-RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (658)
Q Consensus 88 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 166 (658)
+.+.++.+|+.|+|++|+++. +|. +..+. +|++|+|++|.+++. ..++.+++|++|+|++|.+++..|..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 456788999999999999995 565 55554 999999999999964 6899999999999999999965555569999
Q ss_pred CCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCccc----CC---CCCCCcc
Q 006178 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC----LE---YLPSTSF 239 (658)
Q Consensus 167 ~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~----l~---~l~~~~~ 239 (658)
+|++|+|++|+++ .+|. +..+..+++|+.|++++|.++ .+|.. +. ++..+++
T Consensus 89 ~L~~L~L~~N~i~-~~~~-------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGD-------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp TCCEEECCSCCCC-CGGG-------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CCCEEECCCCcCC-cchh-------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 9999999999996 4442 023567889999999999998 55653 44 4444556
Q ss_pred CCCc
Q 006178 240 QGNC 243 (658)
Q Consensus 240 ~~n~ 243 (658)
++|.
T Consensus 148 ~~n~ 151 (176)
T 1a9n_A 148 QKVK 151 (176)
T ss_dssp EECC
T ss_pred CcCC
Confidence 6553
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.6e-12 Score=135.32 Aligned_cols=171 Identities=19% Similarity=0.147 Sum_probs=133.6
Q ss_pred CCCEEEEEecCCCCcccCCc-cccCCCCCcE-EeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccce
Q 006178 69 RDRVLKINISGSSLKGFLAP-ELGLLTYLQE-LILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~-~~~~l~~L~~-L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (658)
..+++.|+|++|.+.+.+|+ .|.++++|+. +++++|++++..|..|..+++|++|++++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 35799999999999887765 6788988775 677789999888999999999999999999999766667777888899
Q ss_pred eeccc-ccCCCCChhhhcCCC-CCCEEeCCCCCCcccCCCCCCCCccccccccccCC-CCccc-----ccCCCCCcEEEc
Q 006178 147 INLQS-NGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS-ANLTG-----LCHLSQLKVADF 218 (658)
Q Consensus 147 L~Ls~-N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~-n~l~~-----~~~l~~L~~l~l 218 (658)
|++++ |++....+..|..+. .|+.|+|++|+|+ .+|...... ..+..++++. |.++. +..+++|+.||+
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~--~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNG--TQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTT--EEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccc--cchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 99966 567654555677765 6899999999998 566644332 3566677764 55543 467889999999
Q ss_pred cCCcCcccCcccCCCCCCCccCCC
Q 006178 219 SYNFFVGSIPKCLEYLPSTSFQGN 242 (658)
Q Consensus 219 s~N~l~g~ip~~l~~l~~~~~~~n 242 (658)
++|+|+...+..+.+++.+...++
T Consensus 210 s~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 210 SRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp TTSCCCCCCSSSCTTCCEEECTTC
T ss_pred CCCCcCccChhhhccchHhhhccC
Confidence 999999544456788887776554
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-11 Score=128.40 Aligned_cols=105 Identities=20% Similarity=0.136 Sum_probs=89.3
Q ss_pred cEEeccCC-cccccCCcccCCCCCCCEEEccC-CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCC
Q 006178 97 QELILHGN-NLIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (658)
Q Consensus 97 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 174 (658)
..++++++ +|++ +|. |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788988 8985 888 99999999999996 99998777899999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 175 ~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
+|+|++ +|... +..+. |+.|+|++|.|..
T Consensus 89 ~N~l~~-~~~~~--------------------~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALES-LSWKT--------------------VQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSC-CCSTT--------------------TCSCC-CCEEECCSSCCCC
T ss_pred CCccce-eCHHH--------------------cccCC-ceEEEeeCCCccC
Confidence 999995 44322 11223 8888888888864
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.9e-11 Score=121.59 Aligned_cols=137 Identities=14% Similarity=0.097 Sum_probs=104.5
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+...++.|+.+.||++... ++.+++|........ ....+.+|+++++.+ .|..+.++++++.+.+ ..++|||
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e 90 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMS 90 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEE
Confidence 3467788888999999865 578888876432111 123588999999999 4778889999988766 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------------------------------------- 482 (658)
|++|.+|.+.+. +......++.+++++|+.||+..
T Consensus 91 ~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 999999987642 11234578899999999999810
Q ss_pred ------------------CCCeeeccCCCcceeecCCCCceeccccch
Q 006178 483 ------------------GPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 483 ------------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
.+.++|+|++|.||+++++..+.|+||+.+
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 136999999999999987656679999854
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-13 Score=149.37 Aligned_cols=177 Identities=23% Similarity=0.160 Sum_probs=115.1
Q ss_pred CCEEEEEecCCCCcccCCcc-ccCCCCCcEEeccCCcccc----cCCcccCCCCCCCEEEccCCcCCCCCccccc-CCc-
Q 006178 70 DRVLKINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLT- 142 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~-~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~- 142 (658)
.+++.|+|++|.++...... +..+++|++|+|++|.++. .+|..+..+++|++|||++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 35778888888876543333 6677888888888888774 3566677778888888888887654333332 344
Q ss_pred ---ccceeecccccCCC----CChhhhcCCCCCCEEeCCCCCCcccCCCCCCC---CccccccccccCCCCccc------
Q 006178 143 ---GLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG------ 206 (658)
Q Consensus 143 ---~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~---~~~~~l~~~~l~~n~l~~------ 206 (658)
+|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+..... ....++..++++.|.++.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 58888888888873 55777888888888888888876432221000 001246667777777654
Q ss_pred ---ccCCCCCcEEEccCCcCcccCccc--------CCCCCCCccCCCccCC
Q 006178 207 ---LCHLSQLKVADFSYNFFVGSIPKC--------LEYLPSTSFQGNCLQN 246 (658)
Q Consensus 207 ---~~~l~~L~~l~ls~N~l~g~ip~~--------l~~l~~~~~~~n~~~~ 246 (658)
+..+++|+.|++++|.++...+.. ..++..+++++|.+..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 213 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS 213 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBT
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcH
Confidence 234577888888888876543322 2366777777775544
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.23 E-value=2.4e-13 Score=147.10 Aligned_cols=175 Identities=19% Similarity=0.163 Sum_probs=130.1
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCcEEeccCCcccccC-----CcccCCCCCCCEEEccCCcCCCC----Ccc
Q 006178 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGII-----PKELGLLKRLKILDLGTNQLTGP----IPP 136 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~----~~~~~~~l~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 136 (658)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++.- +..+..+++|++|+|++|.+++. +|.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 4788999999999874 5777888999999999999987642 33334688999999999999854 677
Q ss_pred cccCCcccceeecccccCCCCChhhhcC-----CCCCCEEeCCCCCCccc----CCCCCCCCccccccccccCCCCcccc
Q 006178 137 EIGNLTGLVKINLQSNGLTGRLPAELGN-----LISLEELHLDRNRLQGA----VPAGSNSGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~L~~N~l~g~----~p~~~~~~~~~~l~~~~l~~n~l~~~ 207 (658)
.+..+++|+.|+|++|.+++..+..+.. .++|++|+|++|.+++. +|... .....+..+++++|.++..
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l--~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL--AQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHH--HHCSSCCEEECCSSBCHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHH--hhCCCccEEEccCCccccc
Confidence 7888999999999999987654444443 36899999999998754 22110 0114667788888887641
Q ss_pred -----c-----CCCCCcEEEccCCcCcc----cCcccC---CCCCCCccCCCccCC
Q 006178 208 -----C-----HLSQLKVADFSYNFFVG----SIPKCL---EYLPSTSFQGNCLQN 246 (658)
Q Consensus 208 -----~-----~l~~L~~l~ls~N~l~g----~ip~~l---~~l~~~~~~~n~~~~ 246 (658)
. ..++|+.|++++|.+++ .+|..+ .+|..+++++|.+..
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 1 15689999999999986 677654 566677888887654
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-13 Score=131.83 Aligned_cols=131 Identities=25% Similarity=0.269 Sum_probs=109.4
Q ss_pred ccCCCCCcEEeccCCcccccCCc------ccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhc
Q 006178 90 LGLLTYLQELILHGNNLIGIIPK------ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELG 163 (658)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 163 (658)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55677889999999999999887 89999999999999999996 78 8999999999999999999 7898888
Q ss_pred CCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc-cc---CCCCCCCcc
Q 006178 164 NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP-KC---LEYLPSTSF 239 (658)
Q Consensus 164 ~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip-~~---l~~l~~~~~ 239 (658)
.+++|++|+|++|++++ +| .+..+++|+.|++++|.+++..+ .. +.+|..+.+
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~----------------------~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l 147 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS----------------------GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLL 147 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH----------------------HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEE
T ss_pred cCCcCCEEECcCCcCCc-CC----------------------ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEe
Confidence 89999999999999985 33 24456789999999999985322 23 445666788
Q ss_pred CCCccCC
Q 006178 240 QGNCLQN 246 (658)
Q Consensus 240 ~~n~~~~ 246 (658)
.+|.+.+
T Consensus 148 ~~N~l~~ 154 (198)
T 1ds9_A 148 AGNPLYN 154 (198)
T ss_dssp CSCHHHH
T ss_pred cCCcccc
Confidence 8886654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-10 Score=115.09 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=95.9
Q ss_pred ccc-CCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC--ccceeeEEecCCCCceEEEEEe
Q 006178 365 IIG-SSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG-~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.++ .|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++....+ ..++||||
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~ 96 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGE 96 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEEC
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEe
Confidence 344 56669999998877888999875322 1134778999999995544 566888887765 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL--------------------------------------- 482 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--------------------------------------- 482 (658)
++|.+|. ... .+ ...++.++++.|+.||+..
T Consensus 97 i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 97 VPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred cCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 9998884 221 12 2367788888888888742
Q ss_pred ----------------CCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 483 ----------------GPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 483 ----------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
.+.++|+|++|.||+++++..++|+|||.+.
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999887667799999653
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.11 E-value=3e-10 Score=118.41 Aligned_cols=143 Identities=11% Similarity=0.104 Sum_probs=105.1
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEe--eeccccchhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCC-CceEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLC--IKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSP-FTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~--~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~-~~~~lv 438 (658)
+.|+.|.++.||+....+ ..+++|+.. ..... .....+.+|+.+++.+. +..+.++++++.+... ...++|
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~---~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL---PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC---CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 578999999999998765 567777653 22111 11245788999999996 5568899998876531 146899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------------------------------------
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------------------------------------ 482 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------ 482 (658)
|||++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99999987754221 23788899999999999999999721
Q ss_pred -------------------CCCeeeccCCCcceeecCCCC--ceeccccchhh
Q 006178 483 -------------------GPPFTISELNSSAVYLTEDFS--PKLVDFDSWKT 514 (658)
Q Consensus 483 -------------------~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~ 514 (658)
.+.++|+|++|.||++++++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 58999997653
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=110.84 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=28.1
Q ss_pred CCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCC
Q 006178 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 93 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
+++|+.|+|.+ +++..-+.+|.+|++|+.|+|++|.+.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc
Confidence 78888888877 777666667888888888888877754
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.2e-11 Score=125.06 Aligned_cols=111 Identities=20% Similarity=0.196 Sum_probs=79.7
Q ss_pred CCEEEEEecCCCCcccCCccccC-----CCCCcEEeccCCcccccCCccc-CCCCCCCEEEccCCcCCCCCcccc-----
Q 006178 70 DRVLKINISGSSLKGFLAPELGL-----LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----- 138 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~-----l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~----- 138 (658)
..++.|+|++|.++..-...+.. .++|+.|+|++|.++..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46789999999987643333332 3689999999998865322222 345688999999998874333333
Q ss_pred cCCcccceeecccccCCC----CChhhhcCCCCCCEEeCCCCCCcc
Q 006178 139 GNLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.++.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 346789999999999864 345556788899999999998864
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.90 E-value=8.3e-10 Score=112.19 Aligned_cols=188 Identities=15% Similarity=0.096 Sum_probs=120.1
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCC--ccceeeEEecCCC-CceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHEN--TGKLLGYCRESSP-FTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~n--Iv~l~~~~~~~~~-~~~~lv~ 439 (658)
+.++.|.+..||+.. ..+++|.... ......+.+|+++++.+ .+.. +.+++.+....+. ...|+||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKH------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESS------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCC------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 458899999999863 4677776421 12345788999999988 4433 3455544333221 1348999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE-------------------------------------- 481 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-------------------------------------- 481 (658)
|+++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp ECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 99999888754331 378888889999999999999961
Q ss_pred -----------------CCCCeeeccCCCcceeecC--CCCceeccccchhhhhhcCC--CCCCc---ccc-------cC
Q 006178 482 -----------------LGPPFTISELNSSAVYLTE--DFSPKLVDFDSWKTILARSE--KNPGT---LGS-------QG 530 (658)
Q Consensus 482 -----------------~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~~~--~~~~~---~~~-------~~ 530 (658)
..+.++|+|++|.||++++ ...+.|+||+.+..-....+ ..... .+. .+
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1146899999999999998 45678999997654211000 00000 000 00
Q ss_pred ccccC-CcccccCCCCccccchhhHHHHHHHHhCCCCC
Q 006178 531 AICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 531 ~~~~a-PE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
|.... |+... ......+.|++|.++|++.+|..+|
T Consensus 252 Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00011 11111 1122358999999999999999875
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2e-10 Score=112.90 Aligned_cols=127 Identities=22% Similarity=0.158 Sum_probs=86.7
Q ss_pred CCCCccceeecCCCCCEEEEEecC---CCCcccCCc-c-----------------------ccCCCCCcE--EeccCCcc
Q 006178 56 DPCHWTGIACSDARDRVLKINISG---SSLKGFLAP-E-----------------------LGLLTYLQE--LILHGNNL 106 (658)
Q Consensus 56 ~~c~w~gv~C~~~~~~v~~l~L~~---n~l~g~~~~-~-----------------------~~~l~~L~~--L~L~~N~l 106 (658)
..|.|.|+.|+....+|..+-..+ ..+.+.+++ . +...+.|.. ++++.|..
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 368899999986555665555544 222333332 1 222233333 56666733
Q ss_pred ---cccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccceeecccccCCCCChhhhcCCC--CCCEEeCCCCCCc
Q 006178 107 ---IGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI--SLEELHLDRNRLQ 179 (658)
Q Consensus 107 ---~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~L~~N~l~ 179 (658)
.+.++....++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 22222223568899999999999997 5567778999999999999999964 4455555 9999999999999
Q ss_pred ccCCC
Q 006178 180 GAVPA 184 (658)
Q Consensus 180 g~~p~ 184 (658)
+.+|.
T Consensus 234 ~~~~~ 238 (267)
T 3rw6_A 234 DTFRD 238 (267)
T ss_dssp GGCSS
T ss_pred cccCc
Confidence 87773
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.2e-09 Score=118.37 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=67.4
Q ss_pred CCEEEEEecCCCCcccCCccccCC--CCCcEEeccCCc-ccc-cCCcccCCCCCCCEEEccCCcCCCC----CcccccCC
Q 006178 70 DRVLKINISGSSLKGFLAPELGLL--TYLQELILHGNN-LIG-IIPKELGLLKRLKILDLGTNQLTGP----IPPEIGNL 141 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l--~~L~~L~L~~N~-l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l 141 (658)
.+++.|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+
T Consensus 112 ~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 112 RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 367888888888776555555543 347777777665 111 1222233567777777777776554 33344556
Q ss_pred cccceeecccccCC----CCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 142 TGLVKINLQSNGLT----GRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 142 ~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+.+
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 234 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE 234 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH
Confidence 67777777777766 2334445566777777777766654
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.60 E-value=6.9e-09 Score=101.93 Aligned_cols=80 Identities=24% Similarity=0.248 Sum_probs=68.2
Q ss_pred cCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEccCCcCCCCCcccccCCc--ccceeecccccCCCCChh------
Q 006178 91 GLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT--GLVKINLQSNGLTGRLPA------ 160 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~g~~p~------ 160 (658)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999998 5667788999999999999999964 4455555 999999999999987763
Q ss_pred -hhcCCCCCCEEe
Q 006178 161 -ELGNLISLEELH 172 (658)
Q Consensus 161 -~~~~l~~L~~L~ 172 (658)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367899999887
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.60 E-value=6.9e-09 Score=108.22 Aligned_cols=137 Identities=19% Similarity=0.155 Sum_probs=99.3
Q ss_pred CCEEEEEecCCCCcccCCccc-cCCCCCcEEeccCCcccccCCccc-----CCCCCCCEEEccCCcCCC----CCccccc
Q 006178 70 DRVLKINISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKEL-----GLLKRLKILDLGTNQLTG----PIPPEIG 139 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~-~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g----~~p~~~~ 139 (658)
..++.|+|++|.++..-...+ ..+.+|+.|+|++|.++..-...+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999975433333 346789999999999975433333 356889999999999864 2445567
Q ss_pred CCcccceeecccccCCC----CChhhhcCCCCCCEEeCCCCCCcccCCCCCCC--CccccccccccCCCCccc
Q 006178 140 NLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNS--GYTANIHGMYASSANLTG 206 (658)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~--~~~~~l~~~~l~~n~l~~ 206 (658)
.+++|++|+|++|.++. .++..+...++|++|+|++|.++..-...... .....+..+++++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 88999999999999974 23566778899999999999997431110000 011357788999998864
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.56 E-value=4.9e-09 Score=116.91 Aligned_cols=167 Identities=11% Similarity=0.072 Sum_probs=111.1
Q ss_pred CEEEEEecCCC-Ccc-cCCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCC----CCcccccC
Q 006178 71 RVLKINISGSS-LKG-FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGN 140 (658)
Q Consensus 71 ~v~~l~L~~n~-l~g-~~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~ 140 (658)
+++.|+|+++. ++. .++..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 211 1223345789999999999998765 44455678999999999999973 34455678
Q ss_pred CcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCC---CCCCccccccccccCCCCccc----ccCCCCC
Q 006178 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG---SNSGYTANIHGMYASSANLTG----LCHLSQL 213 (658)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~---~~~~~~~~l~~~~l~~n~l~~----~~~l~~L 213 (658)
+++|+.|+|++|.+.+ +|..+.++++|++|+++.+... ++.. .......++..+.++.+.... +..+++|
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L 295 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED--IGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQI 295 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC--TTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccc--cchHHHHHHhhccccccccCccccchhHHHHHHhhcCCC
Confidence 8999999999999995 8899999999999999864322 2210 001111233334443332211 3346678
Q ss_pred cEEEccCCcCcccCc----ccCCCCCCCccC
Q 006178 214 KVADFSYNFFVGSIP----KCLEYLPSTSFQ 240 (658)
Q Consensus 214 ~~l~ls~N~l~g~ip----~~l~~l~~~~~~ 240 (658)
+.|++++|.+++..+ ..+.+|..+.+.
T Consensus 296 ~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 296 RKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred cEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 888888887665433 223444555555
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-06 Score=88.11 Aligned_cols=135 Identities=10% Similarity=0.012 Sum_probs=94.5
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC---CccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.++.|....||+. +..+++|.-. . ......+.+|+++|+.+.+. .+.+++.+..... ...++|||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--S----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-GNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--S----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-SCEEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--C----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-CceEEEEe
Confidence 46788988999998 5677777631 1 12345788999999999643 3667777765322 25689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE--------------------------------------- 481 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~--------------------------------------- 481 (658)
|++|.++.+.... .++..++..++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999888763221 245566666666776666666642
Q ss_pred ------------------CCCCeeeccCCCcceeecC---CCC-ceeccccchh
Q 006178 482 ------------------LGPPFTISELNSSAVYLTE---DFS-PKLVDFDSWK 513 (658)
Q Consensus 482 ------------------~~~~ivHrDlkp~NILl~~---~~~-~kl~DFGla~ 513 (658)
..+.++|+|++|.||++++ ++. +.|+||+.+.
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2235699999999999987 455 4899998654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=9.9e-07 Score=87.58 Aligned_cols=135 Identities=14% Similarity=0.055 Sum_probs=94.9
Q ss_pred ccccCCCCe-eEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDS-LVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g-~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+..|..| .||+.... ++..+++|.-... ....+.+|...|+.+. +--+.++++++.+.+ ..++|||
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme 100 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTT 100 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEE
Confidence 345556555 69998865 4567777764211 2346888999999883 445778899988776 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------------------------------------- 482 (658)
++++.++.+..... ......++.++++.|+-||+..
T Consensus 101 ~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp CCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred eeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 99998877665321 1233456666777777777410
Q ss_pred -----------------CCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 483 -----------------GPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 483 -----------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
.+.++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1248999999999999987777799998553
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.38 E-value=1.3e-08 Score=95.14 Aligned_cols=92 Identities=21% Similarity=0.165 Sum_probs=52.5
Q ss_pred ccccCCCCCcEEeccCC-ccccc----CCcccCCCCCCCEEEccCCcCCCC----CcccccCCcccceeecccccCCCC-
Q 006178 88 PELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKINLQSNGLTGR- 157 (658)
Q Consensus 88 ~~~~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~- 157 (658)
..+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 33455566666666666 55421 333445556677777777766421 222334445667777777766532
Q ss_pred ---ChhhhcCCCCCCEEeC--CCCCCc
Q 006178 158 ---LPAELGNLISLEELHL--DRNRLQ 179 (658)
Q Consensus 158 ---~p~~~~~l~~L~~L~L--~~N~l~ 179 (658)
+...+...++|++|+| ++|.++
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 3445556667777777 666665
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.2e-07 Score=105.53 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCEEEEEecCCCCcccCCcccc-CCCCCcEEeccCC-ccccc-CCcccCCCCCCCEEEccCCcCCCCCccccc----CCc
Q 006178 70 DRVLKINISGSSLKGFLAPELG-LLTYLQELILHGN-NLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIG----NLT 142 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l~ 142 (658)
.+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788999999998877666675 6899999999998 45432 445555789999999999998766554443 667
Q ss_pred ccceeeccccc--CCC-CChhhhcCCCCCCEEeCCCC
Q 006178 143 GLVKINLQSNG--LTG-RLPAELGNLISLEELHLDRN 176 (658)
Q Consensus 143 ~L~~L~Ls~N~--l~g-~~p~~~~~l~~L~~L~L~~N 176 (658)
+|+.|+|++|. ++. .++..+.++++|++|+|++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 89999999887 221 12222355789999999888
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.33 E-value=6.6e-08 Score=90.20 Aligned_cols=111 Identities=17% Similarity=0.238 Sum_probs=87.6
Q ss_pred CCCEEEEEecCC-CCcc----cCCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCCC----Cc
Q 006178 69 RDRVLKINISGS-SLKG----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (658)
Q Consensus 69 ~~~v~~l~L~~n-~l~g----~~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (658)
...++.|+|++| .+.. .+...+...+.|++|+|++|.+... +...+...++|++|+|++|.|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 357899999999 8864 2445667789999999999999642 344556678999999999999743 45
Q ss_pred ccccCCcccceeec--ccccCCCC----ChhhhcCCCCCCEEeCCCCCCc
Q 006178 136 PEIGNLTGLVKINL--QSNGLTGR----LPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 136 ~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
..+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88999743 3445666789999999999885
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.28 E-value=1e-06 Score=90.32 Aligned_cols=89 Identities=16% Similarity=0.077 Sum_probs=56.2
Q ss_pred CCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccc-eeecccccCCCCChhhhcCCCCCCEE
Q 006178 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV-KINLQSNGLTGRLPAELGNLISLEEL 171 (658)
Q Consensus 93 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L 171 (658)
+++|+.|+|++|+++...+..|.++++|+.|+|++| ++..-+..|.++++|+ .|+|++ +++..-+..|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566777777766666555556666777777777666 5533345566666676 676666 5554445666667777777
Q ss_pred eCCCCCCcccCCC
Q 006178 172 HLDRNRLQGAVPA 184 (658)
Q Consensus 172 ~L~~N~l~g~~p~ 184 (658)
++++|+++ .|+.
T Consensus 303 ~l~~n~i~-~I~~ 314 (329)
T 3sb4_A 303 LATGDKIT-TLGD 314 (329)
T ss_dssp EECSSCCC-EECT
T ss_pred EeCCCccC-ccch
Confidence 77666666 4444
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.28 E-value=3.2e-08 Score=110.34 Aligned_cols=154 Identities=10% Similarity=-0.001 Sum_probs=99.5
Q ss_pred CCEEEEEecC---------CCCcccCCcccc-CCCCCcEEeccCCcccccCCcccC-CCCCCCEEEcc--C----CcCCC
Q 006178 70 DRVLKINISG---------SSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLG--T----NQLTG 132 (658)
Q Consensus 70 ~~v~~l~L~~---------n~l~g~~~~~~~-~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g 132 (658)
.+++.|+|.+ +.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+|+ + |.+++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 4678888843 445433222333 478888888888888776555554 57888999988 4 55652
Q ss_pred CC-----cccccCCcccceeecccccCCCCChhhhcC-CCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc
Q 006178 133 PI-----PPEIGNLTGLVKINLQSNGLTGRLPAELGN-LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206 (658)
Q Consensus 133 ~~-----p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~ 206 (658)
.. +..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..... ...++..+++++|.++.
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~-~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS-GCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHH-HCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHh-cCCCcCEEECcCCCCcH
Confidence 21 12256778888888876 666555556665 788888888888886543211000 02356667777777642
Q ss_pred ------ccCCCCCcEEEccCCcCcc
Q 006178 207 ------LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 207 ------~~~l~~L~~l~ls~N~l~g 225 (658)
...+++|+.|++++|.++.
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 2346789999999998753
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=3.5e-06 Score=87.32 Aligned_cols=85 Identities=7% Similarity=-0.030 Sum_probs=54.6
Q ss_pred ccc-cCCCCeeEEEEEec-------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-C--CCccceeeEEecCCC
Q 006178 364 NII-GSSPDSLVYKGTMK-------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H--ENTGKLLGYCRESSP 432 (658)
Q Consensus 364 ~~l-G~G~~g~Vy~~~~~-------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~ 432 (658)
+.| +.|....+|+.... ++..+++|........ .......+.+|+.+++.+. + -.+.++++++.+.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~-~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV-PVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC-CSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc-ccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 457 88888999998765 2566777754221100 0000134678999998884 3 357788888765421
Q ss_pred -CceEEEEEecCCCChhh
Q 006178 433 -FTRMLVFDYASNGTLYE 449 (658)
Q Consensus 433 -~~~~lv~E~~~~gsL~~ 449 (658)
...++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 14589999999877654
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.6e-07 Score=95.54 Aligned_cols=171 Identities=16% Similarity=0.117 Sum_probs=80.4
Q ss_pred CEEEEEecCCCCcc-c-------CCccccCCCCCcEEeccCCccc---------ccCCcccCCCCCCCEEEccCCcCCCC
Q 006178 71 RVLKINISGSSLKG-F-------LAPELGLLTYLQELILHGNNLI---------GIIPKELGLLKRLKILDLGTNQLTGP 133 (658)
Q Consensus 71 ~v~~l~L~~n~l~g-~-------~~~~~~~l~~L~~L~L~~N~l~---------g~~p~~~~~l~~L~~L~Ls~N~l~g~ 133 (658)
+|+.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~ 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-S 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-B
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-e
Confidence 45566665444432 1 1223445566666666544321 123333455666777777665211 2
Q ss_pred CcccccCCcccceeecccccCCCCChhhhc--CCCCCCEEeCCC--CCCccc--C---CCCCCCCccccccccccCCCCc
Q 006178 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELG--NLISLEELHLDR--NRLQGA--V---PAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 134 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~L~~--N~l~g~--~---p~~~~~~~~~~l~~~~l~~n~l 204 (658)
+|. + .+++|+.|+|..|.++......++ .+++|+.|+|+. |...|. + .........+++..+.+..|.+
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i 264 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE 264 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT
T ss_pred ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC
Confidence 332 2 256667777666665433223333 566666666642 211111 0 0000000113444445544444
Q ss_pred cc-----c---cCCCCCcEEEccCCcCccc----Cccc---CCCCCCCccCCCcc
Q 006178 205 TG-----L---CHLSQLKVADFSYNFFVGS----IPKC---LEYLPSTSFQGNCL 244 (658)
Q Consensus 205 ~~-----~---~~l~~L~~l~ls~N~l~g~----ip~~---l~~l~~~~~~~n~~ 244 (658)
.. + ..+++|+.|+|+.|.++.. ++.. +.+|..++++.|++
T Consensus 265 ~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 265 QNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp HHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred chHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 31 1 1356777777777777653 2322 34555566666643
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.19 E-value=5.4e-07 Score=93.13 Aligned_cols=154 Identities=20% Similarity=0.204 Sum_probs=90.5
Q ss_pred CCEEEEEecCCCCc---------ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-
Q 006178 70 DRVLKINISGSSLK---------GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG- 139 (658)
Q Consensus 70 ~~v~~l~L~~n~l~---------g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 139 (658)
.+++.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++...-..+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 36777777654331 224444566788888888776311 2333 33 67888888877766532222333
Q ss_pred -CCcccceeeccc--ccCCCC-----Chhhh--cCCCCCCEEeCCCCCCcccCCCCCC-CCccccccccccCCCCccc--
Q 006178 140 -NLTGLVKINLQS--NGLTGR-----LPAEL--GNLISLEELHLDRNRLQGAVPAGSN-SGYTANIHGMYASSANLTG-- 206 (658)
Q Consensus 140 -~l~~L~~L~Ls~--N~l~g~-----~p~~~--~~l~~L~~L~L~~N~l~g~~p~~~~-~~~~~~l~~~~l~~n~l~~-- 206 (658)
.+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+++..+.... ....+++..++++.|.+..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 677888887753 221111 11122 2467888888888877643221000 0123467777777777653
Q ss_pred -------ccCCCCCcEEEccCCcCccc
Q 006178 207 -------LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 207 -------~~~l~~L~~l~ls~N~l~g~ 226 (658)
+.++++|+.|++++|.++..
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHHhhcccCCcceEEECCCCcCCHH
Confidence 34578999999999988644
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.10 E-value=1.5e-05 Score=83.77 Aligned_cols=143 Identities=14% Similarity=0.139 Sum_probs=88.0
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.++|..+ ++..-...|.+ .+|+.++|.+ ++...-+.+|.++++|+.++|+.|.++ .+|.....+.+|+.+.|..
T Consensus 137 L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~ 212 (401)
T 4fdw_A 137 IAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPV 212 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCT
T ss_pred ccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCC
Confidence 555666544 44433445555 3577777764 566555667778888888888888777 4554443467788888874
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc-----ccccCCCCCcEEEccCCcCc
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL-----TGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l-----~~~~~l~~L~~l~ls~N~l~ 224 (658)
| ++..-...|.++++|+.++|..| ++ .|+...+.. ..+..+.+.. ++ ..|.++.+|+.+++.+|.+.
T Consensus 213 ~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~--~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 213 T-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE--SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp T-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT--CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred c-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc--CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCcccc
Confidence 4 55444566778888888888765 43 455443332 2344444422 22 23566778888888777664
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.01 E-value=3.7e-05 Score=80.67 Aligned_cols=167 Identities=11% Similarity=0.068 Sum_probs=90.1
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCc---------
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT--------- 142 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--------- 142 (658)
++.++|.+ +++..-+..|.++++|+.++|++|+++..-...|. ..+|+.+.|..| ++..-...|.+++
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 55555553 44444444566666666666666555533333333 344555544422 3322223334444
Q ss_pred -------------ccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCc----ccCCCCCCCCccccccccccCCCCcc
Q 006178 143 -------------GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ----GAVPAGSNSGYTANIHGMYASSANLT 205 (658)
Q Consensus 143 -------------~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~----g~~p~~~~~~~~~~l~~~~l~~n~l~ 205 (658)
+|+.+.| .|.++..-+..|.++++|+.+.+.+|.+. ..|+...+.+ ..++..+.+.. ++.
T Consensus 236 ~l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~-c~~L~~l~l~~-~i~ 312 (401)
T 4fdw_A 236 NVSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEG-CPKLARFEIPE-SIR 312 (401)
T ss_dssp TCCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTT-CTTCCEECCCT-TCC
T ss_pred CccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhC-CccCCeEEeCC-ceE
Confidence 4555555 23344334567889999999999888765 1355443332 23455555553 233
Q ss_pred -----cccCCCCCcEEEccCCcCcccCcccCC--CCCCCccCCCccC
Q 006178 206 -----GLCHLSQLKVADFSYNFFVGSIPKCLE--YLPSTSFQGNCLQ 245 (658)
Q Consensus 206 -----~~~~l~~L~~l~ls~N~l~g~ip~~l~--~l~~~~~~~n~~~ 245 (658)
.|.++.+|+.++|..| ++..-+.+|. +|..+.+.+|.+.
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTPP 358 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSCC
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCCc
Confidence 3667889999999665 4422233343 4556677777443
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.9e-05 Score=83.02 Aligned_cols=78 Identities=10% Similarity=-0.047 Sum_probs=48.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeecc-ccc--hhhHHHHHHHHHHHHhccC--C-CccceeeEEecCCCCceE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWT--GYLELYFQREVADLARINH--E-NTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~--~~~~~~~~~E~~~l~~l~H--~-nIv~l~~~~~~~~~~~~~ 436 (658)
+.||.|..+.||++... +++.+++|....... ... ....+++..|.++++.+.. + .+.+++.+. .+ ..+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~~ 111 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MAV 111 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TTE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--ccE
Confidence 57999999999999865 467888887543211 000 0122356789999988742 3 345666543 33 348
Q ss_pred EEEEecCCC
Q 006178 437 LVFDYASNG 445 (658)
Q Consensus 437 lv~E~~~~g 445 (658)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999763
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.91 E-value=6.7e-05 Score=76.90 Aligned_cols=138 Identities=15% Similarity=0.177 Sum_probs=77.7
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--CCCccceeeE------EecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGY------CRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~------~~~~~~~~~ 435 (658)
+.|+.|..+.||+....++ .+++|..... ...+..|..+++.+. .-.+.+++.. ....+ ..
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~--~~ 106 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGS--FL 106 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETT--EE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECC--EE
Confidence 4566677899999987665 4777776321 123445666666653 1133444431 12233 56
Q ss_pred EEEEEecCCCChh--------------hhhcc---CC--C-------CCCCHHHH-------------------------
Q 006178 436 MLVFDYASNGTLY--------------EHLHY---GE--R-------CQVSWTRR------------------------- 464 (658)
Q Consensus 436 ~lv~E~~~~gsL~--------------~~l~~---~~--~-------~~l~~~~~------------------------- 464 (658)
+++|||++|.++. ..+|. .. . ..-.|...
T Consensus 107 ~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (346)
T 2q83_A 107 FVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQ 186 (346)
T ss_dssp EEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred EEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHH
Confidence 8999999986542 01111 00 0 01123221
Q ss_pred ------HHHHHHHHHHHHHhhh----------cCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 465 ------MKIVIGIARGLKYLHT----------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 465 ------~~i~~qia~gL~yLH~----------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
..+..++.+++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 187 LYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 0111224456677763 12458999999999999987888999999854
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.89 E-value=7.5e-05 Score=75.27 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=89.2
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.|+.|....+|+.... +..+++|..... ....+.+|.+.|+.+. ...+.+++++....+ ..++|||
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvme 111 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLLE 111 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEEE
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEEE
Confidence 56899999999999864 567777765321 2456889999999883 367889999887665 6799999
Q ss_pred ecCCCChhh-----------hhccCCC---C-----------------CCCHHHHH---HHHHH----------------
Q 006178 441 YASNGTLYE-----------HLHYGER---C-----------------QVSWTRRM---KIVIG---------------- 470 (658)
Q Consensus 441 ~~~~gsL~~-----------~l~~~~~---~-----------------~l~~~~~~---~i~~q---------------- 470 (658)
|+++..+.. .++.... . .-+|.+.. ++..+
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999876521 1222110 0 12455322 11111
Q ss_pred HHHH-HHHhhh-cCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 471 IARG-LKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 471 ia~g-L~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
+.+. ...|.. ...|.++|+|+.+.|++++.++ +.|.||+
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 123321 2356899999999999999887 8899984
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00014 Score=72.67 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=52.4
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-C--CCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H--ENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+|.|..+.||+.+..+|+.+++|+-..... .....|.+|++.|+.+. . -.+.+++++. . .++|||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~----~~lv~e 90 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D----RTLAME 90 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T----TEEEEE
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhhHHHHHHHHHHHHHhhCCCCcceEEecc--C----ceEEEE
Confidence 56899999999999999999999987532211 11235789999999884 2 2345555542 2 279999
Q ss_pred ecCCCCh
Q 006178 441 YASNGTL 447 (658)
Q Consensus 441 ~~~~gsL 447 (658)
|++.+..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987644
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00031 Score=74.33 Aligned_cols=80 Identities=11% Similarity=0.044 Sum_probs=45.0
Q ss_pred CCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC---CCCccccchhhHHHHHH
Q 006178 483 GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR---HLDVQGNIYAFGVLLLE 559 (658)
Q Consensus 483 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~ksDVwS~Gvvl~e 559 (658)
.+.++|+|++|.|||+++++ ++|+||+.+..-....+.. .........|.+|+..... .-....++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIG-AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHH-HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHH-HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998776 9999998765311000000 0000000123344433211 11233556678888888
Q ss_pred HHhCC
Q 006178 560 IISGR 564 (658)
Q Consensus 560 lltG~ 564 (658)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.36 E-value=6.5e-05 Score=68.24 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=42.0
Q ss_pred CCcEEeccCCcccccCCcccCCCCCCCEEEccCCc-CCCCCcccccCC----cccceeeccccc-CCCCChhhhcCCCCC
Q 006178 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNL----TGLVKINLQSNG-LTGRLPAELGNLISL 168 (658)
Q Consensus 95 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~L 168 (658)
.|+.|||+++.++..=-..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|++|. +|..=-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555433212234556666666666653 432111223332 356667776653 543222345666777
Q ss_pred CEEeCCCCC
Q 006178 169 EELHLDRNR 177 (658)
Q Consensus 169 ~~L~L~~N~ 177 (658)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777653
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0012 Score=66.98 Aligned_cols=140 Identities=13% Similarity=0.087 Sum_probs=77.1
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC--ccceeeE------EecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGY------CRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~------~~~~~~~~~ 435 (658)
+.|+.|....+|+....++ .+++|...... ..+.+..|+.+++.+.... +.+++.. ....+ ..
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g--~~ 98 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSG--RP 98 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETT--EE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECC--EE
Confidence 4567788899999987665 57777664311 1224567888888774222 3444421 11122 46
Q ss_pred EEEEEecCCCChhhh--------------hcc---C-CCC---CC---CHHHHHH------------HHHHHHHHHHHhh
Q 006178 436 MLVFDYASNGTLYEH--------------LHY---G-ERC---QV---SWTRRMK------------IVIGIARGLKYLH 479 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~--------------l~~---~-~~~---~l---~~~~~~~------------i~~qia~gL~yLH 479 (658)
+++|+|++|..+... ++. . ... .. .|..... +...+.+.+++++
T Consensus 99 ~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~ 178 (322)
T 2ppq_A 99 AALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLA 178 (322)
T ss_dssp EEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHH
T ss_pred EEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 899999988654210 111 0 000 01 1322111 0012344455555
Q ss_pred hc----CCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 480 TE----LGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 480 ~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
+. ....++|+|+.+.||+++++..+.|+||+.+
T Consensus 179 ~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a 215 (322)
T 2ppq_A 179 AHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 215 (322)
T ss_dssp HHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred hhCcccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence 32 1347999999999999998765689999854
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00061 Score=69.49 Aligned_cols=31 Identities=13% Similarity=0.234 Sum_probs=26.2
Q ss_pred CCCeeeccCCCcceeecCC----CCceeccccchh
Q 006178 483 GPPFTISELNSSAVYLTED----FSPKLVDFDSWK 513 (658)
Q Consensus 483 ~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 513 (658)
.+.++|+|+.+.||+++.+ ..+.|+||+.+.
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 3479999999999999874 678999998654
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0016 Score=65.36 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=42.2
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCc-cceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.|+.|....+|+. ..+++|.-....... ....+|+.+++.+....+ .+++++..+ .-++++||+
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-----~~r~~E~~~l~~l~~~g~~P~~~~~~~~----~~~~v~e~i 89 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-----INRANEAVAAREAAKAGVSPEVLHVDPA----TGVMVTRYI 89 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C-----CCHHHHHHHHHHHHHTTSSCCEEEECTT----TCCEEEECC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce-----eCHHHHHHHHHHHHHcCCCCceEEEECC----CCEEEEeec
Confidence 56888999999999 457777653221110 112468888887743223 466655432 237999999
Q ss_pred -CCCCh
Q 006178 443 -SNGTL 447 (658)
Q Consensus 443 -~~gsL 447 (658)
++.++
T Consensus 90 ~~g~~l 95 (301)
T 3dxq_A 90 AGAQTM 95 (301)
T ss_dssp TTCEEC
T ss_pred CCCccC
Confidence 65444
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0051 Score=62.28 Aligned_cols=139 Identities=11% Similarity=0.082 Sum_probs=78.6
Q ss_pred cccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC--CccceeeE-----EecCCCCceEE
Q 006178 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE--NTGKLLGY-----CRESSPFTRML 437 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~-----~~~~~~~~~~l 437 (658)
.++ |....||+....+|+.+++|....... ....+..|..+++.+... .+++++.. ....+ ..++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g--~~~~ 104 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFA 104 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEE
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC--EEEE
Confidence 466 778899998877777888887642211 134567788888888422 24555543 11122 4578
Q ss_pred EEEecCCCChhh-----h---------hcc----C---CCCCCCHHHH----HHH---------------HHHHHHHHHH
Q 006178 438 VFDYASNGTLYE-----H---------LHY----G---ERCQVSWTRR----MKI---------------VIGIARGLKY 477 (658)
Q Consensus 438 v~E~~~~gsL~~-----~---------l~~----~---~~~~l~~~~~----~~i---------------~~qia~gL~y 477 (658)
+|||++|..+.. + ++. . .....++... ..+ ...+.+.++.
T Consensus 105 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (328)
T 1zyl_A 105 VFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAA 184 (328)
T ss_dssp EEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHH
Confidence 999998754421 0 110 0 0111232211 001 1111122333
Q ss_pred hhhc----CCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 478 LHTE----LGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 478 LH~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
+... ....++|+|+++.||+++ + .+.|+||+.+.
T Consensus 185 l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 185 VTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 3221 234689999999999999 4 88999998543
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0016 Score=68.93 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=47.4
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.|+.|....||++...+ ++.+++|..... . ....+.+|..+++.+. +.-..++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E----TESHLVAESVIFTLLSERHLGPKLYGIFS--G--- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T---
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C---
Confidence 568888899999998763 356776654211 1 1134568999999884 333467776553 2
Q ss_pred eEEEEEecCCCCh
Q 006178 435 RMLVFDYASNGTL 447 (658)
Q Consensus 435 ~~lv~E~~~~gsL 447 (658)
.+||||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 489999986444
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00015 Score=65.85 Aligned_cols=84 Identities=13% Similarity=0.100 Sum_probs=62.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCc-ccccCCcccCCC----CCCCEEEccCCc-CCCCCcccccCCcc
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLL----KRLKILDLGTNQ-LTGPIPPEIGNLTG 143 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 143 (658)
-+++.|||+++.++..=-..+..+++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999875433567899999999999995 653222234554 479999999975 66332245778999
Q ss_pred cceeeccccc
Q 006178 144 LVKINLQSNG 153 (658)
Q Consensus 144 L~~L~Ls~N~ 153 (658)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999985
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0044 Score=64.07 Aligned_cols=139 Identities=13% Similarity=0.065 Sum_probs=81.1
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.|..|-...+|+....+ ++.+++|+- ... . .......+|.++++.+. +.-..++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~~-~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GAI-L---QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEEC-C-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEEC-CCc-c---chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---
Confidence 457778888999998753 356777653 111 1 11334668999998883 433467776653 2
Q ss_pred eEEEEEecCCCChhhh-----------------hccC----CCCCC-CHHHHHHHHHHHHH-------------------
Q 006178 435 RMLVFDYASNGTLYEH-----------------LHYG----ERCQV-SWTRRMKIVIGIAR------------------- 473 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~-----------------l~~~----~~~~l-~~~~~~~i~~qia~------------------- 473 (658)
.+||||++|.+|..- ++.. .+.+. -|.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 389999988655311 1111 11111 24566666655432
Q ss_pred HHHHhhhc-----CCCCeeeccCCCcceeecCC----CCceeccccchh
Q 006178 474 GLKYLHTE-----LGPPFTISELNSSAVYLTED----FSPKLVDFDSWK 513 (658)
Q Consensus 474 gL~yLH~~-----~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 513 (658)
.++.|.+. ....++|+|+.+.||+++++ +.+.|+||..|.
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 23333321 12379999999999999876 689999998653
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0064 Score=64.56 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=45.3
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCc-cceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.|+.|-...+|++...+ +..+++|........ .. .-.+|..+++.+...++ .++++++. + .+||||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~---~i--dR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e~ 182 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE---II--NREREKKISCILYNKNIAKKIYVFFT--N----GRIEEF 182 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS---CS--CHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh---hc--CHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEEe
Confidence 568888899999999875 456666654221111 00 11478999998854444 57777662 2 369999
Q ss_pred cCCCCh
Q 006178 442 ASNGTL 447 (658)
Q Consensus 442 ~~~gsL 447 (658)
+++.+|
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987554
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0043 Score=57.71 Aligned_cols=103 Identities=9% Similarity=-0.013 Sum_probs=65.9
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
-+|.++|...+. ++++++++.++.|.+.+|.-+-.+..+. .+=+-|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~-PlsEEqaWALc~Qc~~~L~~~~~~~~~~--~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ-PINEEQAWAVCYQCCGSLRAAARRRQPR--HRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCC--CCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHcCC-CcCHHHHHHHHHHHHHHHHhhhhcccCC--ceecCCcceEEecCCceeccc-cccc-----------
Confidence 378898875544 7999999999999999987762211111 222346889999999887764 2110
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCC
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p 566 (658)
.....+-+||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0112244577653 3456788899999999998874444
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0021 Score=55.39 Aligned_cols=56 Identities=29% Similarity=0.420 Sum_probs=28.6
Q ss_pred EEEccCCcCC-CCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCc
Q 006178 122 ILDLGTNQLT-GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 122 ~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
.+|.+++.|+ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4445555443 23343221 23555555555555433444556666666666666553
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0023 Score=55.22 Aligned_cols=56 Identities=29% Similarity=0.387 Sum_probs=33.1
Q ss_pred EEEecCCCCc-ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCC
Q 006178 74 KINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 74 ~l~L~~n~l~-g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
.++.++++|+ ..+|..+ -.+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4666677775 2345332 235666666666666555555666666666666666553
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0029 Score=65.47 Aligned_cols=73 Identities=11% Similarity=0.043 Sum_probs=41.7
Q ss_pred ccccCCCCeeEEEEEecCC---------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC-ccceeeEEecCCCC
Q 006178 364 NIIGSSPDSLVYKGTMKGG---------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN-TGKLLGYCRESSPF 433 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~---------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~ 433 (658)
+.|+.|....+|+....++ +.+++|....... .. .....|.++++.+...+ +.++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~----~~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD----EL-YNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG----GT-SCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc----ce-ecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 4677888889999987542 5666665321111 10 12357888888884333 45676544 22
Q ss_pred ceEEEEEecCCCCh
Q 006178 434 TRMLVFDYASNGTL 447 (658)
Q Consensus 434 ~~~lv~E~~~~gsL 447 (658)
++||||++|.++
T Consensus 110 --~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 --GRIEEWLYGDPL 121 (369)
T ss_dssp --EEEEECCCSEEC
T ss_pred --cEEEEEecCCcC
Confidence 689999987544
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0095 Score=60.70 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=26.5
Q ss_pred CCeeeccCCCcceeecCCCCceeccccchh
Q 006178 484 PPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 484 ~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..++|+|+.+.||++++++.+.|+||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 479999999999999988889999997554
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0095 Score=62.10 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=58.0
Q ss_pred cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCC
Q 006178 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168 (658)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 168 (658)
.|.++..|+.+.+..+... .-...|.++++|+.+++. +.++..-...|.++.+|+.++|..| ++..-..+|.++++|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 3445566666666543322 334455666666666664 3343222344556666666666543 332233456666666
Q ss_pred CEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcC
Q 006178 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFF 223 (658)
Q Consensus 169 ~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l 223 (658)
+.+.|..+ ++ .|.. ..|.++.+|+.+++.+|..
T Consensus 337 ~~i~ip~s-v~-~I~~--------------------~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 337 ERIAIPSS-VT-KIPE--------------------SAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CEEEECTT-CC-BCCG--------------------GGGTTCTTCCEEEESSCHH
T ss_pred CEEEECcc-cC-EEhH--------------------hHhhCCCCCCEEEECCcee
Confidence 66665433 22 2221 2356677788888777653
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0011 Score=61.25 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=69.5
Q ss_pred CCCEEEEEecCC-CCcc----cCCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCCC----Cc
Q 006178 69 RDRVLKINISGS-SLKG----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (658)
Q Consensus 69 ~~~v~~l~L~~n-~l~g----~~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (658)
...++.|+|++| .+.. .+...+..-+.|+.|+|++|.+... +-..+..-+.|+.|+|+.|+|... +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 346788888875 6642 2344556667888888888888632 223344456788888888888632 11
Q ss_pred ccccCCcccceeeccccc---CCC----CChhhhcCCCCCCEEeCCCCCC
Q 006178 136 PEIGNLTGLVKINLQSNG---LTG----RLPAELGNLISLEELHLDRNRL 178 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~---l~g----~~p~~~~~l~~L~~L~L~~N~l 178 (658)
..+..-+.|+.|+|++|. +.. .+-..+..-+.|+.|+++.|..
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 234445668888887653 221 1233455557888888877654
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.016 Score=59.94 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=70.0
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
+..+.+..+ +...-...+.++..|+.+.+..+ ++..-...|.++.+|+.+++..+ +...-...|.++++|+.+.+.+
T Consensus 219 l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~ 295 (379)
T 4h09_A 219 LKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDN 295 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECC
T ss_pred cceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccc
Confidence 444554332 33333445677788888888655 55455566777888888888654 4423334677788888888887
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 185 (658)
+.++..-...|.++.+|+.+.|..+ ++ .|+..
T Consensus 296 ~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~ 327 (379)
T 4h09_A 296 SAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVY 327 (379)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTT
T ss_pred cccceehhhhhcCCCCCCEEEcCcc-cc-EEHHH
Confidence 7777444567788888888888654 44 45443
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.03 Score=57.84 Aligned_cols=94 Identities=13% Similarity=0.102 Sum_probs=71.0
Q ss_pred CccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCC
Q 006178 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (658)
Q Consensus 87 ~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 166 (658)
...+.....|+.+.+..+ +...-...|.++..|+.+.+..+ ++..-...+.++.+|+.+.+..+ ++..-...|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 345667888999988755 44455667889999999999876 55344567888999999999755 5534445788999
Q ss_pred CCCEEeCCCCCCcccCCC
Q 006178 167 SLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 167 ~L~~L~L~~N~l~g~~p~ 184 (658)
+|+.+.+.++.++ .|+.
T Consensus 287 ~L~~i~l~~~~i~-~I~~ 303 (379)
T 4h09_A 287 NLTKVVMDNSAIE-TLEP 303 (379)
T ss_dssp TCCEEEECCTTCC-EECT
T ss_pred ccccccccccccc-eehh
Confidence 9999999988887 5554
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.018 Score=59.96 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=76.1
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.+.+..+-. ..-...|.+++.|+.+.+. +.+...-...|.++.+|+.++|..| ++..-...|.++.+|+.+.|..
T Consensus 267 L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~ 343 (394)
T 4gt6_A 267 LASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPS 343 (394)
T ss_dssp CCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECT
T ss_pred ccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECc
Confidence 44555543322 2223467789999999996 5566556678999999999999865 5533356789999999999976
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRL 178 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l 178 (658)
+ ++..-..+|.++++|+.+++.+|..
T Consensus 344 s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 344 S-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp T-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred c-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 5 6644467899999999999988754
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.0051 Score=56.84 Aligned_cols=89 Identities=19% Similarity=0.104 Sum_probs=62.4
Q ss_pred cccCCCCCcEEeccCC-cccc----cCCcccCCCCCCCEEEccCCcCCC----CCcccccCCcccceeecccccCCCC--
Q 006178 89 ELGLLTYLQELILHGN-NLIG----IIPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR-- 157 (658)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~-- 157 (658)
.+.+-+.|++|+|++| .+.. .+-..+..-+.|+.|+|++|+|.. .+-..+..-+.|+.|+|+.|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455678999999986 6642 133456666899999999999862 2223344557899999999999742
Q ss_pred --ChhhhcCCCCCCEEeCCCCC
Q 006178 158 --LPAELGNLISLEELHLDRNR 177 (658)
Q Consensus 158 --~p~~~~~l~~L~~L~L~~N~ 177 (658)
+-..+..-+.|++|+|++|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHhhCCceeEEECCCCc
Confidence 22334555679999998653
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.07 Score=55.83 Aligned_cols=138 Identities=9% Similarity=0.094 Sum_probs=81.5
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.+..|-...+|+....+ ++.++++..-..... . -+-.+|..+++.+. +.-..++++.+ .+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~----~-idR~~E~~~l~~L~~~gi~P~l~~~~--~~--- 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK----F-YDSKVELDVFRYLSNINIAPNIIADF--PE--- 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C----C-CCHHHHHHHHHHHHHTTSSCCEEEEE--TT---
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch----h-cCHHHHHHHHHHHHhcCCCCCEEEEc--CC---
Confidence 457778888999998763 466777664221111 0 01247888888884 33345666533 22
Q ss_pred eEEEEEecCCCChhh--h---------------hcc----C-------CCCCCCHHHHHHHHHHHH--------------
Q 006178 435 RMLVFDYASNGTLYE--H---------------LHY----G-------ERCQVSWTRRMKIVIGIA-------------- 472 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~--~---------------l~~----~-------~~~~l~~~~~~~i~~qia-------------- 472 (658)
++||||++|..|.. + +|. . .+.+.-|.++.++..++-
T Consensus 146 -~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 224 (424)
T 3mes_A 146 -GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKEL 224 (424)
T ss_dssp -EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHH
T ss_pred -CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhcccc
Confidence 78999999865421 0 010 0 111223555444443321
Q ss_pred -----HHHHHhhhc---------------------CCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 473 -----RGLKYLHTE---------------------LGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 473 -----~gL~yLH~~---------------------~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..+++|.+. ....++|+|+.+.||+ ++++.+.++||..|.
T Consensus 225 ~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 225 YSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 223333211 1236899999999999 788899999998654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.059 Score=55.96 Aligned_cols=141 Identities=16% Similarity=0.092 Sum_probs=76.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.+.+... ++..-...+..+..|+.+.+..+... .-...|..+..|+.+.+..+.+. ...+..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 3455555432 22222345667777888887766443 44455666777777766655432 2345566666666665
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc-----ccccCCCCCcEEEccCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL-----TGLCHLSQLKVADFSYN 221 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l-----~~~~~l~~L~~l~ls~N 221 (658)
.+ ++..-...|.++++|+.++|..+ ++ .|+...+.+. .+|..+.+..+ + ..+.++.+|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c-~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGC-TSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTC-TTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCC-CCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 44 44233445666667777766543 33 4444322211 23333333332 2 23667888999988655
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.04 Score=57.30 Aligned_cols=107 Identities=16% Similarity=0.062 Sum_probs=63.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.+.+..+.. ..-...+..+..|+.+.+..+.+ ....|..+.+|+.+.+..+ ++..-...|.++++|+.++|.
T Consensus 254 ~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcc-eeeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 455666655433 23344566677777777665542 2245667777777777654 442334556777777777776
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 185 (658)
++ ++..-..+|.++++|+.+.+..| ++ .|+..
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~ 360 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGAN 360 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTT
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHH
Confidence 43 55333456777777777777665 44 45543
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=93.33 E-value=0.22 Score=51.77 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=23.6
Q ss_pred CeeeccCCCcceee------cCCCCceeccccchh
Q 006178 485 PFTISELNSSAVYL------TEDFSPKLVDFDSWK 513 (658)
Q Consensus 485 ~ivHrDlkp~NILl------~~~~~~kl~DFGla~ 513 (658)
.++|+|+.+.|||+ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 345678999997654
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=91.71 E-value=0.62 Score=43.21 Aligned_cols=116 Identities=8% Similarity=0.019 Sum_probs=76.2
Q ss_pred cCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcc
Q 006178 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (658)
Q Consensus 416 ~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~N 495 (658)
.||+.+.. .+-.+.+ ...+.|+.-+ +...+-.- ..++...+++++.+|+...++++.. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD--~v~~~y~~~~--~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD--SFQIHYDIND--NHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSS--EEEEEECCCT--TSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEccc--EEEEEEEcCc--ccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888866 4555554 4444454433 23322211 1378899999999999988777654 688899999
Q ss_pred eeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 496 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
|++|.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988853221 121 11111123356778889999998873
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=86.58 E-value=1.9 Score=40.06 Aligned_cols=114 Identities=10% Similarity=0.105 Sum_probs=73.7
Q ss_pred cCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeeeccCCCc
Q 006178 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK-YLHTELGPPFTISELNSS 494 (658)
Q Consensus 416 ~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~-yLH~~~~~~ivHrDlkp~ 494 (658)
.||++ -..+-.+.+ ...+.++.-+++.=...++ .++..++++++.+|+.... +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD--~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSED--EVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSS--EEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCC--EEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67877 333344444 4555555543332223333 3788999999999998877 66654 67788999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCC
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
||++|.++.+++.-.|+-..+ +|..+ ++.-=.-.+=+++..++.++..|
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-------------------PPDEW-----DDERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCH
T ss_pred eEEEeCCCcEEEEEcCCcccC-------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCH
Confidence 999999999999988853221 12211 11111234667888888888776
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.89 E-value=0.14 Score=34.00 Aligned_cols=28 Identities=7% Similarity=-0.001 Sum_probs=13.5
Q ss_pred eeeeeeechhhhHHHHHhhhheeeeccC
Q 006178 292 LTLEIVTGTMVGVLFLVAGFTGLQRCKS 319 (658)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (658)
+++++++|+++++++++++++++|+++.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 4434555555444444444555554443
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.70 E-value=0.17 Score=33.57 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=13.5
Q ss_pred eeeeeeechhhhHHHHHhhhheeeeccC
Q 006178 292 LTLEIVTGTMVGVLFLVAGFTGLQRCKS 319 (658)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (658)
++.++++|+++++++++++++++|+++.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 4444555555444444444555554443
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=81.34 E-value=0.21 Score=52.99 Aligned_cols=61 Identities=7% Similarity=-0.106 Sum_probs=17.2
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEE------EEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEec
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vav------k~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 429 (658)
+.|| ||.||+|.+.. ..+||| |+..... ........|.+|..+++.++|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~--~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG--VSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCcccccccc--ccccccccccccccccccccccccCCCcceEEe
Confidence 5666 99999999864 357787 5543221 122233468889999999999999999987653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 658 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 6e-37 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-34 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-33 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-33 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-32 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-32 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-31 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 5e-31 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 5e-31 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-30 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-30 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-30 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-30 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 8e-30 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-29 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-29 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-28 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-28 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 5e-28 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-27 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-27 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 4e-27 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 8e-27 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 6e-26 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 9e-26 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-25 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-25 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-25 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 6e-24 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-23 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-23 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-22 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-22 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-22 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 7e-22 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 9e-22 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-21 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-20 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-20 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-19 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-19 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-18 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-18 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-18 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-18 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-17 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 5e-17 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-17 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-16 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 4e-16 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-15 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-15 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-15 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-15 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-14 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 5e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-04 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-04 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-13 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-12 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-04 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-04 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 7e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 9e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-07 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-11 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 4e-11 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-11 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 5e-09 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 5e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 0.003 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 5e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 6e-06 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 3e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.002 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.003 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 4e-04 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (345), Expect = 6e-37
Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 25/286 (8%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
+ E+ + IGS VYKG G + ++ T F+ EV
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML----NVTAPTPQQLQAFKNEVGV 57
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
L + H N +GY +V + +LY HLH + + + I
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLA---IVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQT 113
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A+G+ YLH +L S+ ++L ED + K+ DF + +R + G+
Sbjct: 114 AQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGS 169
Query: 532 ICILP----SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587
I + + Q ++YAFG++L E+++G+ P V
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-------V 222
Query: 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ P+L + K + ++ C+ +RP ++ +E
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 3e-34
Identities = 50/285 (17%), Positives = 111/285 (38%), Gaps = 27/285 (9%)
Query: 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
E EV E +G+ V+ G G ++AV SL F E
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-----FLAEA 59
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
IA G+ ++ + +L ++ + +++ S K+ DF + I + G++
Sbjct: 117 QIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAK 171
Query: 530 GAICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588
I P ++ ++ ++++FG+LL EI++ N PEV+
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVI 220
Query: 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ + + + +++ LC RP+ L ++LE
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 128 bits (322), Expect = 1e-33
Identities = 58/307 (18%), Positives = 125/307 (40%), Gaps = 30/307 (9%)
Query: 337 IYID----SEILKDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISL 390
I+ID + + V F++ E++++C +IG+ V G +K G EI V
Sbjct: 2 IFIDPFTFEDPNEAVREFAK-EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 60
Query: 391 CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEH 450
+K + F E + + + +H N L G +S+P M++ ++ NG+L +
Sbjct: 61 TLKSGYTEKQRR-DFLSEASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSL-DS 116
Query: 451 LHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510
Q + + + ++ GIA G+KYL + +L + + + + K+ DF
Sbjct: 117 FLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173
Query: 511 SWKTILARSEKNP--GTLGSQGAICIL-PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ + + LG + I P +++ R +++++G+++ E++S G P
Sbjct: 174 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 233
Query: 567 CCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQ 626
+V++ + D + +++ C D RP
Sbjct: 234 YWDMTN------------QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFG 281
Query: 627 ELCTMLE 633
++ L+
Sbjct: 282 QIVNTLD 288
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (322), Expect = 2e-33
Identities = 51/284 (17%), Positives = 108/284 (38%), Gaps = 33/284 (11%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE--SS 431
V++G +G E+AV +EE + + E+ + HEN + + +
Sbjct: 19 VWRGKWRGE-EVAVKIFSSREER-----SWFREAEIYQTVMLRHENILGFIAADNKDNGT 72
Query: 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPF 486
LV DY +G+L+++L+ R V+ +K+ + A GL +LH E+ P
Sbjct: 73 WTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 487 TISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ------GAICILPSSLE 540
+L S + + ++ + + D + ++ + A +L S+
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 189
Query: 541 ARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP-------EVMSYV 591
+H + +IYA G++ EI + + + P V
Sbjct: 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 249
Query: 592 VDPEL--KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ P + + S + L+V+ +++ C + R + + L
Sbjct: 250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 1e-32
Identities = 62/281 (22%), Positives = 109/281 (38%), Gaps = 31/281 (11%)
Query: 356 EVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
+ ++ IG V G +G ++AV CIK + F E + +
Sbjct: 3 ALNMKELKLLQTIGKGEFGDVMLGDYRGN-KVAVK--CIKNDA----TAQAFLAEASVMT 55
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
++ H N +LLG E +V +Y + G+L ++L R + +K + +
Sbjct: 56 QLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 114
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC 533
++YL G F +L + V ++ED K+ DF K + + +
Sbjct: 115 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----W 166
Query: 534 ILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592
P +L + + ++++FG+LL EI S GR P + L +V+ V
Sbjct: 167 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY------------PRIPLKDVVPRVE 214
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ EV+ C + D RPS +L LE
Sbjct: 215 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 125 bits (314), Expect = 1e-32
Identities = 62/300 (20%), Positives = 115/300 (38%), Gaps = 26/300 (8%)
Query: 349 RFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYF 405
+ + E+ D + + +G VY+G K +AV +L F
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----F 60
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
+E A + I H N +LLG C PF ++ ++ + G L ++L R +VS +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLL 118
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGT 525
+ I+ ++YL F +L + + E+ K+ DF + ++
Sbjct: 119 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHA 174
Query: 526 LGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP 585
P SL ++ +++AFGVLL EI + D ++
Sbjct: 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------PYPGIDLSQVY 226
Query: 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI-DTSISVEL 644
E++ E + + E++ C + + RPS E+ E ++SIS E+
Sbjct: 227 ELLEKDYRMERPEGCPEKVY---ELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 283
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 3e-31
Identities = 49/275 (17%), Positives = 108/275 (39%), Gaps = 27/275 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F +G+ +V G +G ++A+ K E F E + ++HE
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAI-----KMIKEGSMSEDEFIEEAKVMMNLSHEKL 61
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL +
Sbjct: 62 VQLYGVCTKQRPI--FIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL-PSSL 539
F +L + + + K+ DF + + ++ ++GS+ + P L
Sbjct: 119 ---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVL 173
Query: 540 EARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598
+ +I+AFGVL+ EI S G+ P + E ++ +
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIAQGLRLY 221
Query: 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ + + ++ C + +RP+ + L + +
Sbjct: 222 RPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 5e-31
Identities = 49/274 (17%), Positives = 102/274 (37%), Gaps = 25/274 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F IGS LV+ G ++A+ K E F E + +++H
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAI-----KTIREGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+L G C E +P LVF++ +G L ++ +R + + + + + G+ YL
Sbjct: 63 VQLYGVCLEQAPI--CLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL-PSSL 539
+L + + E+ K+ DF + + ++ + G++ + P
Sbjct: 120 ---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVF 174
Query: 540 EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599
+ ++++FGVL+ E+ S +++ N EV+ + +
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----------SEVVEDISTGFRLYK 223
Query: 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ +++N C RP+ L L
Sbjct: 224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLA 257
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 5e-31
Identities = 47/287 (16%), Positives = 112/287 (39%), Gaps = 26/287 (9%)
Query: 353 QELEVACEDFSNI---IGSSPDSLVYKGTMKGGPEIAVISL-CIKEEHWTGYLELYFQRE 408
++L + ++ +G V +G + + +++ +K+ E RE
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMRE 59
Query: 409 VADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIV 468
+ ++++ +L+G C+ + LV + A G L++ L G+R ++ + +++
Sbjct: 60 AQIMHQLDNPYIVRLIGVCQAEALM---LVMEMAGGGPLHKFLV-GKREEIPVSNVAELL 115
Query: 469 IGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGS 528
++ G+KYL F +L + V L K+ DF K + A
Sbjct: 116 HQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 172
Query: 529 QGAICIL-PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPE 586
+ + P + R + +++++GV + E +S G+ P ++ PE
Sbjct: 173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY------------KKMKGPE 220
Query: 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
VM+++ + + + +++ C RP + +
Sbjct: 221 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (298), Expect = 1e-30
Identities = 52/278 (18%), Positives = 97/278 (34%), Gaps = 27/278 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ED+ IG+ K K +I V + T + EV L + H
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLRELKH 62
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGL 475
N + + + T +V +Y G L + G ER + ++++ + L
Sbjct: 63 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122
Query: 476 KYLHTELGPPFTIS--ELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC 533
K H T+ +L + V+L + KL DF LAR + +
Sbjct: 123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG-----LARILNHDTSFAKAFVGT 177
Query: 534 IL---PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590
P + + + +I++ G LL E+ + PP E+
Sbjct: 178 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF------------SQKELAGK 225
Query: 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ + + + Y + E++ +N RPS++E+
Sbjct: 226 IREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 263
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 2e-30
Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 23/263 (8%)
Query: 374 VYKGTMKGGPEIAVISL-CIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V KG + + +++ +K E L+ E + ++++ +++G C S
Sbjct: 23 VKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES- 81
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
MLV + A G L ++L + V +++V ++ G+KYL F +L
Sbjct: 82 --WMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLA 134
Query: 493 SSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL-PSSLEARHLDVQGNIY 551
+ V L K+ DF K + A + + P + + +++
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 552 AFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEV 610
+FGVL+ E S G+ P KG EV + + E + + ++
Sbjct: 195 SFGVLMWEAFSYGQKPYRGMKG------------SEVTAMLEKGERMGCPAGCPREMYDL 242
Query: 611 VNLCVNPDITKRPSMQELCTMLE 633
+NLC D+ RP + L
Sbjct: 243 MNLCWTYDVENRPGFAAVELRLR 265
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 3e-30
Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 26/309 (8%)
Query: 339 IDSEILKDV--VRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKE 394
++ E+++ V V L V F+ +IG VY GT+ G +I +
Sbjct: 9 LNPELVQAVQHVVIGPSSLIV---HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR 65
Query: 395 EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG 454
G + F E + +H N LLG C S + ++V Y +G L +
Sbjct: 66 ITDIGEVS-QFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPLVVLPYMKHGDLR-NFIRN 122
Query: 455 ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
E + + + +A+G+K+L + F +L + L E F+ K+ DF +
Sbjct: 123 ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 179
Query: 515 ILARSEKNPGTLGSQGA--ICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG 572
+ + + + SL+ + + ++++FGVLL E+++ P D
Sbjct: 180 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV- 238
Query: 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
++ Y++ + EV+ C +P RPS EL + +
Sbjct: 239 ----------NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288
Query: 633 EGRIDTSIS 641
T I
Sbjct: 289 SAIFSTFIG 297
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 4e-30
Identities = 49/287 (17%), Positives = 105/287 (36%), Gaps = 27/287 (9%)
Query: 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQR 407
++ E+ E +G V+ GT G +A+ K F +
Sbjct: 7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAI-----KTLKPGTMSPEAFLQ 61
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
E + ++ HE +L E + +V +Y S G+L + L + + + +
Sbjct: 62 EAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 118
Query: 468 VIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLG 527
IA G+ Y+ + +L ++ + + E+ K+ DF + L + G
Sbjct: 119 AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQG 173
Query: 528 SQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE 586
++ I P + ++ ++++FG+LL E+ + N E
Sbjct: 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----------RE 222
Query: 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
V+ V + + + +++ C + +RP+ + L LE
Sbjct: 223 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 269
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 8e-30
Identities = 55/284 (19%), Positives = 115/284 (40%), Gaps = 20/284 (7%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIK--EEHWTGYLELYFQREVAD 411
E+ +C +IG+ VYKG +K + + IK + +T + F E
Sbjct: 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ + +H N +L G + P M++ +Y NG + + + S + + ++ GI
Sbjct: 63 MGQFSHHNIIRLEGVISKYKPM--MIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGI 119
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+KYL + +L + + + + K+ DF + + E T G +
Sbjct: 120 AAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 176
Query: 532 I-CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590
I P ++ R ++++FG+++ E+++ + N EVM
Sbjct: 177 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----------HEVMKA 225
Query: 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634
+ D D I +++ C + +RP ++ ++L+
Sbjct: 226 INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 269
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 117 bits (293), Expect = 1e-29
Identities = 61/308 (19%), Positives = 108/308 (35%), Gaps = 43/308 (13%)
Query: 353 QELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLC-IKE--EHWTGYLELYFQR 407
LE + IG V++ G ++ +K E + ++ FQR
Sbjct: 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR 65
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------- 452
E A +A ++ N KLLG C P L+F+Y + G L E L
Sbjct: 66 EAALMAEFDNPNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123
Query: 453 -------YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPK 505
+S ++ I +A G+ YL F +L + + E+ K
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVK 180
Query: 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRP 565
+ DF + I + + + P S+ + +++A+GV+L EI S
Sbjct: 181 IADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 240
Query: 566 PCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625
+ EV+ YV D + + + ++ LC + RPS
Sbjct: 241 QPYYGMAH-----------EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSF 289
Query: 626 QELCTMLE 633
+ +L+
Sbjct: 290 CSIHRILQ 297
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 1e-29
Identities = 56/331 (16%), Positives = 113/331 (34%), Gaps = 50/331 (15%)
Query: 335 DHIYIDSEIL--KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKG------GPEIA 386
+++YID L F R L F +G+ V + T G +A
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIKSDAAMTVA 57
Query: 387 VISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNG 445
V +K E E+ L+ + NH N LLG C P +++ +Y G
Sbjct: 58 VK--MLKPSAHLTEREA-LMSELKVLSYLGNHMNIVNLLGACTIGGP--TLVITEYCCYG 112
Query: 446 TLYEHLH----------------YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
L L + + + +A+G+ +L ++
Sbjct: 113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHR 169
Query: 490 ELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGN 549
+L + + LT K+ DF + I S + P S+ + +
Sbjct: 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 229
Query: 550 IYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDL-KVIC 608
++++G+ L E+ S + + ++ + S + +
Sbjct: 230 VWSYGIFLWELFSLGSSPY-----------PGMPVDSKFYKMIKEGFRMLSPEHAPAEMY 278
Query: 609 EVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639
+++ C + D KRP+ +++ ++E +I S
Sbjct: 279 DIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (285), Expect = 2e-28
Identities = 57/280 (20%), Positives = 102/280 (36%), Gaps = 26/280 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKE--EHWTGYLELYFQREVADLARI 415
+F ++GS VYKG E I + IKE E + E +A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL 475
++ + +LLG C S+ L+ G L ++ + + + + IA+G+
Sbjct: 69 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGM 124
Query: 476 KYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL 535
YL +L + V + K+ DF K +L EK G + I +
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK-LLGAEEKEYHAEGGKVPIKWM 180
Query: 536 -PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593
S+ R Q +++++GV + E+++ G P D + E+ S +
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY------------DGIPASEISSILEK 228
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
E + ++ C D RP +EL
Sbjct: 229 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 113 bits (285), Expect = 2e-28
Identities = 51/271 (18%), Positives = 94/271 (34%), Gaps = 23/271 (8%)
Query: 360 EDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
+ FS++ IG VY E+ I + +EV L ++ H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
NT + G LV +Y + + + + G +GL Y
Sbjct: 75 PNTIQYRGCYLREHTA--WLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAY 130
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
LH+ ++ + + L+E KL DF S I+A + GT IL
Sbjct: 131 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS-IMAPANSFVGTPYWMAPEVIL-- 184
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597
+++ D + ++++ G+ +E+ +PP + E P + S +
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFR 244
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+F V+ C+ RP+ + L
Sbjct: 245 NF-----------VDSCLQKIPQDRPTSEVL 264
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 5e-28
Identities = 59/300 (19%), Positives = 117/300 (39%), Gaps = 35/300 (11%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYF 405
E EVA E + +G +VY+G KG +A+ + E F
Sbjct: 14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI--KTVNEAASMRERI-EF 70
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY--------GERC 457
E + + N + +LLG + P +++ + + G L +L
Sbjct: 71 LNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMANNPVLA 128
Query: 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 129 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 185
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW 577
G G + P SL+ ++++FGV+L EI + + N
Sbjct: 186 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN---- 241
Query: 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
+V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 242 -------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (278), Expect = 2e-27
Identities = 66/333 (19%), Positives = 120/333 (36%), Gaps = 51/333 (15%)
Query: 330 SASEKDHIYIDSEILKDVVR--FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG----GP 383
+S+ ++ Y+D + ++ F R+ LE F ++GS V T G G
Sbjct: 12 GSSDNEYFYVDFREYEYDLKWEFPRENLE-----FGKVLGSGAFGKVMNATAYGISKTGV 66
Query: 384 EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442
I V +KE+ + E E+ + ++ +HEN LLG C S P L+F+Y
Sbjct: 67 SIQVAVKMLKEKADSSERE-ALMSELKMMTQLGSHENIVNLLGACTLSGPI--YLIFEYC 123
Query: 443 SNGTLYEHLH---------------------YGERCQVSWTRRMKIVIGIARGLKYLHTE 481
G L +L + +++ + +A+G+++L
Sbjct: 124 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF- 182
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA 541
+L + V +T K+ DF + I++ S + P SL
Sbjct: 183 --KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE 240
Query: 542 RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600
++ +++++G+LL EI S G P + + + E+
Sbjct: 241 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYII- 299
Query: 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ C D KRPS L + L
Sbjct: 300 ----------MQSCWAFDSRKRPSFPNLTSFLG 322
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (278), Expect = 2e-27
Identities = 54/308 (17%), Positives = 108/308 (35%), Gaps = 47/308 (15%)
Query: 355 LEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADL 412
+E+ +DF + +G+ +V+K + K + L I E RE+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-IHLEIKPAIRN-QIIRELQVL 58
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
N G + ++ G+L + L + ++ K+ I +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEI--SICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVI 114
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI 532
+GL YL + ++ S + + KL DF ++ + G
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFG-----VSGQLIDSMANSFVGTR 167
Query: 533 CIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPP-------------CCKDKGNLVDW- 577
+ P L+ H VQ +I++ G+ L+E+ GR P C+ +G+ +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVI-----------------CEVVNLCVNPDIT 620
+ + SY +D ++ L I + VN C+ +
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 621 KRPSMQEL 628
+R +++L
Sbjct: 288 ERADLKQL 295
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (272), Expect = 4e-27
Identities = 53/271 (19%), Positives = 101/271 (37%), Gaps = 24/271 (8%)
Query: 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
F IG VYKG E+A +++ T F+ E L + H N
Sbjct: 13 FDIEIGRGSFKTVYKGLDTETTVEVAWC--ELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70
Query: 421 GKLLGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+ + + +LV + ++GTL +L + I +GL++L
Sbjct: 71 VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFL 128
Query: 479 HTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
H PP +L +++T S K+ D LA ++ G +
Sbjct: 129 H-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLG-----LATLKRASFAKAVIGTPEFMAP 182
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597
+ D ++YAFG+ +LE+ + P + + + + V S V
Sbjct: 183 EMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFD 235
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ ++K E++ C+ + +R S+++L
Sbjct: 236 KVAIPEVK---EIIEGCIRQNKDERYSIKDL 263
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 8e-27
Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 28/272 (10%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
EDF +G VY K I + + K + +E +REV + + H
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
N +L GY +++ L+ +YA GT+Y L + R + +A L Y
Sbjct: 66 PNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 121
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL-P 536
H++ ++ + L K+ DF + + G + L P
Sbjct: 122 CHSK---RVIHRDIKPENLLLGSAGELKIADFG-----WSVHAPSSRRTTLCGTLDYLPP 173
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596
+E R D + ++++ GVL E + G+PP + + K + V
Sbjct: 174 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRVEFTFPDFVTEGA 231
Query: 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ ++ + + ++RP ++E+
Sbjct: 232 RDL-----------ISRLLKHNPSQRPMLREV 252
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 6e-26
Identities = 48/270 (17%), Positives = 88/270 (32%), Gaps = 33/270 (12%)
Query: 374 VYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429
V +G +AV L ++ F REV + ++H N +L G
Sbjct: 24 VRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 430 SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
+V + A G+L + + + + +A G+ YL + F
Sbjct: 83 PPMK---MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHR 135
Query: 490 ELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL-PSSLEARHLDVQG 548
+L + + L K+ DF + + + + P SL+ R
Sbjct: 136 DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS 195
Query: 549 NIYAFGVLLLEIIS-GRPPCCKDKG----NLVDWAKDYLELPEVMSYVVDPELKHFSYDD 603
+ + FGV L E+ + G+ P G + +D + L PE ++ +
Sbjct: 196 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP----QDIYNV---- 247
Query: 604 LKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ C RP+ L L
Sbjct: 248 -------MVQCWAHKPEDRPTFVALRDFLL 270
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (264), Expect = 9e-26
Identities = 56/290 (19%), Positives = 101/290 (34%), Gaps = 38/290 (13%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHEN 419
F ++IG V K +K ++ +E+ + F E+ L ++ +H N
Sbjct: 13 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 72
Query: 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSWTRRM 465
LLG C L +YA +G L + L +S + +
Sbjct: 73 IINLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 130
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGT 525
+ARG+ YL F +L + + + E++ K+ DF + +K G
Sbjct: 131 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 187
Query: 526 LGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGR--PPCCKDKGNLVDWAKDYLE 583
+ SL +++++GVLL EI+S P C L +
Sbjct: 188 -LPVRWMA--IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244
Query: 584 LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
L + ++ D E+ + C +RPS ++ L
Sbjct: 245 LEKPLN--CDDEVYDL-----------MRQCWREKPYERPSFAQILVSLN 281
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 4e-25
Identities = 55/288 (19%), Positives = 99/288 (34%), Gaps = 32/288 (11%)
Query: 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ E+ E IG V++G P +AV K E F +E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEA 59
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + +H + KL+G E+ + ++ + + G L + + +
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPVW---IIMELCTLGELRSF-LQVRKYSLDLASLILYAY 115
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
++ L YL + F ++ + V ++ + KL DF + + S + G
Sbjct: 116 QLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL 171
Query: 530 GAICILPSSLEARHLDVQGNIYAFGVLLLEII-SGRPPCCKDKGNLVDWA---KDYLELP 585
+ P S+ R +++ FGV + EI+ G P K N V + L +P
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP 231
Query: 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
P L + C D ++RP EL L
Sbjct: 232 PNCP----PTLYSL-----------MTKCWAYDPSRRPRFTELKAQLS 264
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 103 bits (259), Expect = 4e-25
Identities = 55/295 (18%), Positives = 101/295 (34%), Gaps = 30/295 (10%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
DF +++G+ S V K ++ I CI ++ G + E+A L +I H N
Sbjct: 12 DFRDVLGTGAFSEVILAEDKRTQKLVAIK-CIAKKALEGKEGS-MENEIAVLHKIKHPNI 69
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L L+ S G L++ + E+ + +++ + +KYLH
Sbjct: 70 VALDDIYESGGHL--YLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHD 125
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE 540
+ N L ED + DF K + G+ G + P L
Sbjct: 126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVA--PEVLA 182
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA--KDYLELPEVMSYVVDPELKH 598
+ + ++ GV+ ++ G PP + + K E + K
Sbjct: 183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 242
Query: 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELC--------TMLEGRIDTSISVELK 645
F + + D KR + ++ T L+ I S+S ++K
Sbjct: 243 F-----------IRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIK 286
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 4e-25
Identities = 49/280 (17%), Positives = 97/280 (34%), Gaps = 35/280 (12%)
Query: 360 EDFSNI---IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
EDF I +G VYK K +A I + + + E+ LA +
Sbjct: 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK-VIDTKSEEELED--YMVEIDILASCD 67
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KLL + ++ ++ + G + + ER ++ ++ + L
Sbjct: 68 HPNIVKLLDAFYYENNL--WILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALN 124
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI---C 533
YLH +L + + T D KL DF ++ +G+ +
Sbjct: 125 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 181
Query: 534 ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-----NLVDWAKDYLELPEVM 588
++ + + R D + ++++ G+ L+E+ PP + + L P
Sbjct: 182 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW 241
Query: 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
S K F + C+ ++ R + +L
Sbjct: 242 S----SNFKDF-----------LKKCLEKNVDARWTTSQL 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 6e-24
Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 35/261 (13%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
VY G E+A+ + ++++ + E+ + + N L
Sbjct: 36 VYTAMDVATGQEVAIRQMNLQQQPK----KELIINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
+V +Y + G+L + + + + + + L++LH+ ++
Sbjct: 92 L--WVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIK 143
Query: 493 SSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYA 552
S + L D S KL DF I K +G+ + P + + + +I++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA--PEVVTRKAYGPKVDIWS 201
Query: 553 FGVLLLEIISGRPPCCKDKG-----NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVI 607
G++ +E+I G PP + + L+ PE +S + F
Sbjct: 202 LGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS----AIFRDF-------- 249
Query: 608 CEVVNLCVNPDITKRPSMQEL 628
+N C++ D+ KR S +EL
Sbjct: 250 ---LNRCLDMDVEKRGSAKEL 267
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.8 bits (243), Expect = 4e-23
Identities = 54/273 (19%), Positives = 92/273 (33%), Gaps = 26/273 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
EDF I+G S V I + K Y RE ++R++H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL ++ YA NG L +++ T I L+Y
Sbjct: 68 PFFVKLYFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEY 123
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
LH +L + L ED ++ DF + K + S++ A + P
Sbjct: 124 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 180
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA--KDYLELPEVMSYVVDPE 595
L + +++A G ++ ++++G PP L+ K + PE P+
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 236
Query: 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ V + D TKR +E+
Sbjct: 237 ARDL-----------VEKLLVLDATKRLGCEEM 258
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 97.1 bits (241), Expect = 5e-23
Identities = 43/275 (15%), Positives = 92/275 (33%), Gaps = 22/275 (8%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLL 424
I+G S V+ + + + L F+RE + A +NH +
Sbjct: 14 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 73
Query: 425 GYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL 482
+P +V +Y TL + +H ++ R ++++ + L + H
Sbjct: 74 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ-- 129
Query: 483 GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL-PSSLEA 541
++ + + ++ + K++DF + I T G L P
Sbjct: 130 -NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 188
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEVMSYVVDPELKHF 599
+D + ++Y+ G +L E+++G PP D ++ P + +L
Sbjct: 189 DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAV 248
Query: 600 SYDDLKVICEVVNLCVNPDITKRP-SMQELCTMLE 633
V + + R + E+ L
Sbjct: 249 -----------VLKALAKNPENRYQTAAEMRADLV 272
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.1 bits (236), Expect = 2e-22
Identities = 45/280 (16%), Positives = 96/280 (34%), Gaps = 38/280 (13%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
ED+ +G V + E + + + E ++E+ +NH
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPE-NIKKEICINKMLNH 62
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
EN K G+ RE + L +Y S G L++ + + + + G+ Y
Sbjct: 63 ENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVY 118
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC---- 533
LH T ++ + L E + K+ DF LA + +C
Sbjct: 119 LHG---IGITHRDIKPENLLLDERDNLKISDFG-----LATVFRYNNRERLLNKMCGTLP 170
Query: 534 -ILPSSLEARHLDVQGN-IYAFGVLLLEIISGRPPCCKDKGN---LVDWAKDYLELPEVM 588
+ P L+ R + +++ G++L +++G P + + DW + L
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK 230
Query: 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+D ++ + + + R ++ ++
Sbjct: 231 K--IDSAPLAL-----------LHKILVENPSARITIPDI 257
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.9 bits (238), Expect = 3e-22
Identities = 31/259 (11%), Positives = 84/259 (32%), Gaps = 28/259 (10%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V++ + + K G ++ ++E++ L H N L
Sbjct: 21 VHRCVETSSKKTYMA----KFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEEL 76
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+++F++ S ++E ++ +++ + V + L++LH+ ++
Sbjct: 77 --VMIFEFISGLDIFERIN-TSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRP 130
Query: 494 SAVYLTEDFSP--KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIY 551
+ S K+++F + + + L P + + +++
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQL---KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMW 187
Query: 552 AFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICE 609
+ G L+ ++SG P + + + E + E F
Sbjct: 188 SLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF---------- 237
Query: 610 VVNLCVNPDITKRPSMQEL 628
V+ + + R + E
Sbjct: 238 -VDRLLVKERKSRMTASEA 255
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 94.8 bits (235), Expect = 4e-22
Identities = 55/284 (19%), Positives = 102/284 (35%), Gaps = 34/284 (11%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY-----FQREVAD 411
E++ I+G S+V + K E AV + + E+ +EV
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 412 LARIN-HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470
L +++ H N +L LVFD G L+++L E+ +S KI+
Sbjct: 63 LRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRA 118
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ + LH +L + L +D + KL DF L EK G+
Sbjct: 119 LLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSC-QLDPGEKLREVCGTPS 174
Query: 531 AICILPSSLEARHLDVQGN------IYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584
+ P +E D +++ GV++ +++G PP + + +
Sbjct: 175 --YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSG 230
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
PE +S + ++V+ + KR + +E
Sbjct: 231 NYQFG---SPEWDDYS----DTVKDLVSRFLVVQPQKRYTAEEA 267
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 95.5 bits (237), Expect = 7e-22
Identities = 45/257 (17%), Positives = 91/257 (35%), Gaps = 23/257 (8%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V++ K + V Y + E++ + +++H L +
Sbjct: 45 VHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHHPKLINLHDAFEDKYEM 101
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+L+ ++ S G L++ + E ++S + + GLK++H E + +
Sbjct: 102 --VLILEFLSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMH-EHSIVHLDIKPEN 157
Query: 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAF 553
+ S K++DF L E T + A P ++ + +++A
Sbjct: 158 IMCETKKASSVKIIDFGLAT-KLNPDEIVKVTTAT--AEFAAPEIVDREPVGFYTDMWAI 214
Query: 554 GVLLLEIISGRPPCC--KDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVV 611
GVL ++SG P D L + + E E V PE K F +
Sbjct: 215 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF-----------I 263
Query: 612 NLCVNPDITKRPSMQEL 628
+ + KR ++ +
Sbjct: 264 KNLLQKEPRKRLTVHDA 280
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 95.1 bits (236), Expect = 9e-22
Identities = 38/262 (14%), Positives = 94/262 (35%), Gaps = 33/262 (12%)
Query: 374 VYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
V++ T + G A + E + ++E+ ++ + H L + +
Sbjct: 42 VHRVTERATGNNFAAKFVMTPHESD----KETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
++++++ S G L+E + E ++S ++ + + +GL ++H + +L
Sbjct: 98 M--VMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLK 151
Query: 493 SSAVYLTEDFSP--KLVDFDSWKTILARSEKNPGTLGSQGAIC--ILPSSLEARHLDVQG 548
+ T S KL+DF L ++ P E + +
Sbjct: 152 PENIMFTTKRSNELKLIDFG-----LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 206
Query: 549 NIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKV 606
++++ GVL ++SG P + + L + + + + + K F
Sbjct: 207 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF------- 259
Query: 607 ICEVVNLCVNPDITKRPSMQEL 628
+ + D R ++ +
Sbjct: 260 ----IRKLLLADPNTRMTIHQA 277
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.4 bits (231), Expect = 2e-21
Identities = 59/302 (19%), Positives = 108/302 (35%), Gaps = 42/302 (13%)
Query: 356 EVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISL------CIKEEHWTGYLELYFQR 407
E+ + +G V G + + +K + L
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS-DLIS 67
Query: 408 EVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHY------------- 453
E+ + I H+N LLG C + P ++ +YAS G L E+L
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPS 125
Query: 454 -GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512
Q+S + +ARG++YL + +L + V +TED K+ DF
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDK 571
+ I T G + P +L R Q ++++FGVLL EI + G P
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---- 238
Query: 572 GNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631
+ + E+ + + + + ++ C + ++RP+ ++L
Sbjct: 239 --------PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
Query: 632 LE 633
L+
Sbjct: 291 LD 292
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.3 bits (223), Expect = 2e-20
Identities = 51/312 (16%), Positives = 97/312 (31%), Gaps = 57/312 (18%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISL----CIKEEHWTGYLELYF 405
F R L+ +G V + G + A +KE
Sbjct: 10 FPRDRLK-----LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR-AL 63
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV------ 459
E+ L I H L M++ ++ G L +L V
Sbjct: 64 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 123
Query: 460 --------SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
+ + +A+G+++L + +L + + L+E K+ DF
Sbjct: 124 EDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFG- 179
Query: 512 WKTILARSEKNPGTLGSQGAICILP-----SSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
LAR +G + ++ R +Q ++++FGVLL EI S
Sbjct: 180 ----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 235
Query: 567 CCKDKGNLVDWAK-----DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK 621
++ + + P+ + PE+ + C + + ++
Sbjct: 236 PYPGVKIDEEFCRRLKEGTRMRAPDYTT----PEMYQT-----------MLDCWHGEPSQ 280
Query: 622 RPSMQELCTMLE 633
RP+ EL L
Sbjct: 281 RPTFSELVEHLG 292
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.2 bits (223), Expect = 4e-20
Identities = 47/291 (16%), Positives = 94/291 (32%), Gaps = 34/291 (11%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ +IG+ +VY+ + E+ I ++++ + RE+ + +++H N
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNI 75
Query: 421 GKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHYGERCQ-VSWTRRMKIVIGIARGL 475
+L + S LV DY HY Q + + + R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 476 KYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
Y+H+ ++ + L D KL DF S K + + +
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRA 190
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP--CCKDKGNLVDWAKDYLELPEVMSYVV 592
A ++++ G +L E++ G+P LV+ K +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 593 DPELKHFSYDDLKVIC--------------EVVNLCVNPDITKRPSMQELC 629
+P F + +K + + + T R + E C
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.9 bits (217), Expect = 1e-19
Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 25/271 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN 416
EDF ++G V+ K A+ +L +E +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H + + V +Y + G L H+ + +R I GL+
Sbjct: 62 HPFLTHMFCTFQTKENL--FFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQ 117
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
+LH+ +L + L +D K+ DF K + K G+ I P
Sbjct: 118 FLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIA--P 172
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596
L + + + ++FGVLL E++ G+ P + + ++ E
Sbjct: 173 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDNPFYPRWLEKEA 230
Query: 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQE 627
K + + KR ++
Sbjct: 231 KDL-----------LVKLFVREPEKRLGVRG 250
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.4 bits (213), Expect = 3e-19
Identities = 51/283 (18%), Positives = 91/283 (32%), Gaps = 27/283 (9%)
Query: 364 NIIGSSPDSLVYKGTMKGGPE---IAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
+ +G + VYK K + I I L + E G RE+ L ++H N
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINR-TALREIKLLQELSHPNI 62
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
LL S LVFD+ + ++ +GL+YLH
Sbjct: 63 IGLLDAFGHKSNI--SLVFDFMETDLEVIIKDNSLVLT--PSHIKAYMLMTLQGLEYLH- 117
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE 540
+L + + L E+ KL DF K+ + + + ++
Sbjct: 118 --QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAP-ELLFG 174
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPPCCKD-------KGNLVDWAKDYLELPEVMSYVVD 593
AR V +++A G +L E++ P D + + P++ S
Sbjct: 175 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY 234
Query: 594 PELKHFSYDDLKVI--------CEVVNLCVNPDITKRPSMQEL 628
K F L I +++ + R + +
Sbjct: 235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.5 bits (208), Expect = 2e-18
Identities = 46/276 (16%), Positives = 88/276 (31%), Gaps = 29/276 (10%)
Query: 374 VYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVA---DLARINHENTGKLLGYCR 428
V+K GG +A+ ++ + + L REVA L H N +L C
Sbjct: 23 VFKARDLKNGGRFVALK--RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 80
Query: 429 ESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPF 486
S T++ + + L +L V ++ + RGL +LH+
Sbjct: 81 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RV 137
Query: 487 TISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDV 546
+L + +T KL DF I + + + P L
Sbjct: 138 VHRDLKPQNILVTSSGQIKLADFG-LARIYSFQMALTSVVVTLWYRA--PEVLLQSSYAT 194
Query: 547 QGNIYAFGVLLLEIISGRPP--------------CCKDKGNLVDWAKDYLELPEVMSYVV 592
++++ G + E+ +P DW +D +
Sbjct: 195 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS 254
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
++ F D ++ +++ C+ + KR S
Sbjct: 255 AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.0 bits (207), Expect = 3e-18
Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 31/273 (11%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKL 423
++G + V + K E + + +REV R + ++
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK--------ARREVELHWRASQCPHIVRI 70
Query: 424 LGYCRESSPFTR--MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+ + ++V + G L+ + + +I+ I ++YLH+
Sbjct: 71 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 130
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA 541
+ N + KL DF K + N T + P L
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET---TSHNSLTTPCYTPYYVAPEVLGP 187
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA------KDYLELPEVMSYVVDPE 595
D ++++ GV++ ++ G PP + G + E P V E
Sbjct: 188 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 247
Query: 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+K + + + T+R ++ E
Sbjct: 248 VKML-----------IRNLLKTEPTQRMTITEF 269
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 84.0 bits (207), Expect = 4e-18
Identities = 40/275 (14%), Positives = 81/275 (29%), Gaps = 29/275 (10%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-- 415
DFS IIG VY ++ + K+ E E L+ +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 416 -NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
+ + + D + G L+ HL I G
Sbjct: 64 GDCPFIVCMSYAFHTPDKL--SFILDLMNGGDLHYHLSQHGVFS--EADMRFYAAEIILG 119
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI-LARSEKNPGTLGSQGAIC 533
L+++H +L + + L E ++ D + + GT G
Sbjct: 120 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEV 176
Query: 534 ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVV 592
+ + D + ++ G +L +++ G P + K + + + L + +
Sbjct: 177 L----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 232
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQE 627
PEL+ + + D+ +R
Sbjct: 233 SPELRSL-----------LEGLLQRDVNRRLGCLG 256
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.5 bits (203), Expect = 6e-18
Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 30/264 (11%)
Query: 374 VYKGTMKG-GPEIAV--ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430
V K K G + A I + G +REV+ L I H N L
Sbjct: 26 VKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 85
Query: 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISE 490
+ +L+ + + G L++ L E + I G+ YLH+ +
Sbjct: 86 TDV--ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHS---LQIAHFD 138
Query: 491 LNSSAVYLTEDFSP----KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDV 546
L + L + P K++DF + + G+ + P + L +
Sbjct: 139 LKPENIMLLDRNVPKPRIKIIDF-GLAHKIDFGNEFKNIFGTPEFVA--PEIVNYEPLGL 195
Query: 547 QGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEVMSYVVDPELKHFSYDDL 604
+ ++++ GV+ ++SG P D L + + E + K F
Sbjct: 196 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF----- 250
Query: 605 KVICEVVNLCVNPDITKRPSMQEL 628
+ + D KR ++Q+
Sbjct: 251 ------IRRLLVKDPKKRMTIQDS 268
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 81.4 bits (200), Expect = 2e-17
Identities = 32/266 (12%), Positives = 75/266 (28%), Gaps = 20/266 (7%)
Query: 374 VYKGT-MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432
+Y GT + G E+A+ C+K +H E + + +C
Sbjct: 23 IYLGTDIAAGEEVAIKLECVKTKHPQ------LHIESKIYKMMQGGVGIPTIRWCGAEGD 76
Query: 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492
+ ++V + + S + + + ++Y+H++ + N
Sbjct: 77 Y-NVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDN 133
Query: 493 SSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC-----ILPSSLEARHLDVQ 547
+ ++DF K + ++ +
Sbjct: 134 FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR 193
Query: 548 GNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVI 607
++ + G +L+ G P K K + MS ++ K +
Sbjct: 194 DDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMSTPIEVLCKGYP----SEF 248
Query: 608 CEVVNLCVNPDITKRPSMQELCTMLE 633
+N C + +P L +
Sbjct: 249 ATYLNFCRSLRFDDKPDYSYLRQLFR 274
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 79.5 bits (195), Expect = 5e-17
Identities = 44/286 (15%), Positives = 91/286 (31%), Gaps = 36/286 (12%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
IG +VYK G A+ I+ E + RE++ L + H N KL
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELG 483
+LVF++ + ++ + G+ Y H
Sbjct: 66 YDVIHT--KKRLVLVFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHD--- 118
Query: 484 PPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE--- 540
+L + + + K+ DF LAR+ P + + + + +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFG-----LARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 541 -ARHLDVQGNIYAFGVLLLEIISGRPP--------------CCKDKGNLVDWAKDYLELP 585
++ +I++ G + E+++G P N +W + ELP
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW-PNVTELP 232
Query: 586 EVMSYVVDPELKHFSYDDLKVICEVVNL---CVNPDITKRPSMQEL 628
+ E + + ++L + D +R + ++
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 80.1 bits (197), Expect = 6e-17
Identities = 41/267 (15%), Positives = 93/267 (34%), Gaps = 27/267 (10%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
+DF +G+ V+ + + + KE + E L+ + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
++ G +++ ++ DY G L+ L +R + + L+Y
Sbjct: 64 PFIIRMWGTFQDAQQI--FMIMDYIEGGELFSLLRKSQRFPNPVAKF--YAAEVCLALEY 119
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
LH+ +L + L ++ K+ DF K + + GT I P
Sbjct: 120 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPD-----YIAPE 171
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597
+ + + + ++FG+L+ E+++G P N + + L + ++K
Sbjct: 172 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKILNAELRFPPFFNEDVK 229
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRPS 624
++ + D+++R
Sbjct: 230 DL-----------LSRLITRDLSQRLG 245
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.4 bits (192), Expect = 2e-16
Identities = 46/283 (16%), Positives = 97/283 (34%), Gaps = 34/283 (12%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V+K + + + + E G+ RE+ L + HEN L+ CR +
Sbjct: 26 VFKARHRKTGQKVALKKVLMENEKEGFPI-TALREIKILQLLKHENVVNLIEICRTKASP 84
Query: 434 TRM------LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFT 487
LVFD+ + + + +S +R ++ + GL Y+H
Sbjct: 85 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHR---NKIL 139
Query: 488 ISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ-GAICILPSS--LEARHL 544
++ ++ V +T D KL DF + P ++ + P L R
Sbjct: 140 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDY 199
Query: 545 DVQGNIYAFGVLLLEIISGRPPC------------CKDKGNL-------VDWAKDYLELP 585
+++ G ++ E+ + P + G++ VD + Y +L
Sbjct: 200 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 259
Query: 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
V + + +Y ++++ + D +R +
Sbjct: 260 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.9 bits (191), Expect = 4e-16
Identities = 52/307 (16%), Positives = 97/307 (31%), Gaps = 40/307 (13%)
Query: 350 FSRQELEVACEDFSN------IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
F RQE+ + +GS V I + + +
Sbjct: 4 FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK- 62
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASNGTLYEHLHYGERCQV 459
RE+ L + HEN LL LV + GT L + ++
Sbjct: 63 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLM--KHEKL 118
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
R +V + +GL+Y+H +L + + ED K++DF + +
Sbjct: 119 GEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 175
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC----------- 568
T + I L +I++ G ++ E+I+G+
Sbjct: 176 TGYVVTRWYRAPEVI----LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 231
Query: 569 -KDKGNLVDWAKDYLELPEVMSYVVD-PELKHFSYDDL-----KVICEVVNLCVNPDITK 621
K G L+ E +Y+ PEL+ + + + ++ + D +
Sbjct: 232 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ 291
Query: 622 RPSMQEL 628
R + E
Sbjct: 292 RVTAGEA 298
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 1e-15
Identities = 48/287 (16%), Positives = 84/287 (29%), Gaps = 30/287 (10%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423
+ IG +V I I Y + RE+ L R HEN +
Sbjct: 14 SYIGEGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQ-RTLREIKILLRFRHENIIGI 71
Query: 424 LGYCRESSPFTRMLVF--DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
R + V+ + LY+ L +S + I RGLKY+H+
Sbjct: 72 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA 128
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL-- 539
+L S + L K+ DF + + +
Sbjct: 129 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 185
Query: 540 EARHLDVQGNIYAFGVLLLEIISGRPP-CCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598
++ +I++ G +L E++S RP K + ++ L P LK
Sbjct: 186 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 245
Query: 599 FSYDDLKVICEVVNL-----------------CVNPDITKRPSMQEL 628
+Y V + + KR +++
Sbjct: 246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.3 bits (184), Expect = 2e-15
Identities = 44/288 (15%), Positives = 93/288 (32%), Gaps = 28/288 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
E+F IG +VYK K E+ + I+ + T + RE++ L +NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK-KIRLDTETEGVPSTAIREISLLKELNH 60
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
N KLL + ++ + + L + + + + + +GL +
Sbjct: 61 PNIVKLLDVIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
H+ +L + + + + KL DF + +
Sbjct: 118 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEI 173
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPP--------------CCKDKGNLVDWAKDYLE 583
L ++ +I++ G + E+++ R + V W
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW-PGVTS 232
Query: 584 LPEVMSYVVDPELKHFSYDDLKVICEVVNL---CVNPDITKRPSMQEL 628
+P+ + FS + + +L ++ D KR S +
Sbjct: 233 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.4 bits (182), Expect = 3e-15
Identities = 38/271 (14%), Positives = 86/271 (31%), Gaps = 36/271 (13%)
Query: 365 IIGSSPDSLVYKGT-MKGGPEIAV--ISLCIKEEHWTGYLELYFQREVADLARIN--HEN 419
++GS VY G + +A+ + + EV L +++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 420 TGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+LL + F +L+ + ER + + +++ H
Sbjct: 71 VIRLLDWFERPDSF--VLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCH 127
Query: 480 TELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKTILARSEKNP-GTLGSQGAICILPS 537
++ + + + KL+DF S + + GT I
Sbjct: 128 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597
R +++ G+LL +++ G P D+ + + + + +S E +
Sbjct: 185 RYHGRSAA----VWSLGILLYDMVCGDIPFEHDE----EIIRGQVFFRQRVS----SECQ 232
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
H + C+ + RP+ +E+
Sbjct: 233 HL-----------IRWCLALRPSDRPTFEEI 252
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.2 bits (181), Expect = 4e-15
Identities = 38/276 (13%), Positives = 82/276 (29%), Gaps = 34/276 (12%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V+K + EI + ++ + + RE+ L + H+N +L
Sbjct: 18 VFKAKNRETHEIVALK-RVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DK 74
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
LVF++ + + +GL + H+ +L
Sbjct: 75 KLTLVFEFCDQDLKKYFDSCNGDLD--PEIVKSFLFQLLKGLGFCHS---RNVLHRDLKP 129
Query: 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI----LPSSLEARHLDVQGN 549
+ + + KL +F LAR+ P S + + A+ +
Sbjct: 130 QNLLINRNGELKLANFG-----LARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 550 IYAFGVLLLEIISGRPPCCKDKGNLVDWAK--------------DYLELPEVMSYVVDPE 595
+++ G + E+ + P + +LP+ Y + P
Sbjct: 185 MWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPA 244
Query: 596 LKHFSYDDLKVICEVVNL---CVNPDITKRPSMQEL 628
K+ +L + + +R S +E
Sbjct: 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 1e-14
Identities = 45/267 (16%), Positives = 80/267 (29%), Gaps = 26/267 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
D+ ++G V K + + KE + E L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L + V +YA+ G L+ HL + R I L+YLH+
Sbjct: 68 TALKYAFQTHDRL--CFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHS 123
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE 540
++ + L +D K+ DF K ++ G+ + LE
Sbjct: 124 ---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV--LE 178
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA--KDYLELPEVMSYVVDPELKH 598
+ + GV++ E++ GR P + + + P +S PE K
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS----PEAKS 234
Query: 599 FSYDDLKVICEVVNLCVNPDITKRPSM 625
+ + D +R
Sbjct: 235 L-----------LAGLLKKDPKQRLGG 250
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 69.6 bits (169), Expect = 3e-13
Identities = 42/210 (20%), Positives = 72/210 (34%), Gaps = 51/210 (24%)
Query: 47 LSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNL 106
L+N +L A + I + +++++G+ LK L LT L +L L N +
Sbjct: 196 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 253
Query: 107 IGIIPKELGLLKRLKILDLGTNQLTGPIP--------------------PEIGNLTGLVK 146
+ P L L +L L LG NQ++ P I NL L
Sbjct: 254 SNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTY 311
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ L N ++ P + +L L+ L N++ ++
Sbjct: 312 LTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-----------------------VSS 346
Query: 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
L +L+ + +N P L L
Sbjct: 347 LANLTNINWLSAGHNQISDLTP--LANLTR 374
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 68.9 bits (167), Expect = 5e-13
Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 49/199 (24%)
Query: 43 PHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILH 102
P +L+N + L + I + + ++++ + + L LT L EL L
Sbjct: 214 PLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNL--APLSGLTKLTELKLG 271
Query: 103 GNNLIGIIP--------------------KELGLLKRLKILDLGTNQLTGPIPPEIGNLT 142
N + I P + LK L L L N ++ P + +LT
Sbjct: 272 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLT 329
Query: 143 GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202
L ++ +N ++ + L NL ++ L N++ P
Sbjct: 330 KLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP------------------- 368
Query: 203 NLTGLCHLSQLKVADFSYN 221
L +L+++ +
Sbjct: 369 ----LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 6e-05
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131
+K + +++ ++ L + L + I + L L ++ NQLT
Sbjct: 24 KMKTVLGKTNVTDTVSQTD--LDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT 79
Query: 132 GPIPPEIGNLTGLVKIN 148
P + NLT LV I
Sbjct: 80 DITP--LKNLTKLVDIL 94
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
L LG +T + +L + + G+ + + L +L +++ N
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNN 76
Query: 177 RLQGAVPAGSNS 188
+L P + +
Sbjct: 77 QLTDITPLKNLT 88
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 29/108 (26%)
Query: 125 LGTNQLTGPIP-PEI---GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180
LG+ +T P +I L +K L +T + +L + L DR ++
Sbjct: 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIK- 57
Query: 181 AVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228
++ G+ +L+ L +FS N P
Sbjct: 58 ----------------------SIDGVEYLNNLTQINFSNNQLTDITP 83
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 67.5 bits (164), Expect = 7e-13
Identities = 29/270 (10%), Positives = 68/270 (25%), Gaps = 26/270 (9%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
+++GT + I + + E + + Y +
Sbjct: 21 IFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 75
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
+LV D G E L + S + ++ +H ++
Sbjct: 76 -NVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKP 129
Query: 494 SAVYLTEDFSP-----KLVDFDSWKTILARSEKNPGTLGSQGAIC-----ILPSSLEARH 543
+ S +VDF K K + + + ++ R
Sbjct: 130 DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE 189
Query: 544 LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDD 603
+ ++ A G + + + G P A + + + L+
Sbjct: 190 QSRRDDLEALGHVFMYFLRGSLPWQGL-----KAATNKQKYERIGEKKQSTPLRELCAGF 244
Query: 604 LKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ + ++ N P L +
Sbjct: 245 PEEFYKYMHYARNLAFDATPDYDYLQGLFS 274
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 1e-12
Identities = 44/275 (16%), Positives = 88/275 (32%), Gaps = 26/275 (9%)
Query: 360 EDFS--NIIGSSPDSLVYKG----TMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLA 413
E+F ++G+ V+ G A+ L + + E L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 414 RINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIAR 473
I L + + L+ DY + G L+ HL +R + + V I
Sbjct: 84 HIRQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVL 140
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD-SWKTILARSEKNPGTLGSQGAI 532
L++LH ++ + L + L DF S + + +E+ G+ +
Sbjct: 141 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 197
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP--CCKDKGNLVDWAKDYLELPEVMSY 590
D + ++ GVL+ E+++G P +K + + ++ L+
Sbjct: 198 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 257
Query: 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625
+ K + + D KR
Sbjct: 258 EMSALAKDL-----------IQRLLMKDPKKRLGC 281
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.6 bits (161), Expect = 2e-12
Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 17/194 (8%)
Query: 58 CHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117
CH + CSD + ++ L L N + I + L
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLP---------------PDTALLDLQNNKITEIKDGDFKNL 54
Query: 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNR 177
K L L L N+++ P L L ++ L N L L L + +
Sbjct: 55 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITK 114
Query: 178 LQGAVPAGSNSGYTANIHGMYASSAN--LTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP 235
++ +V G N + S+ + +L + L
Sbjct: 115 VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT 174
Query: 236 STSFQGNCLQNKDP 249
GN + D
Sbjct: 175 ELHLDGNKITKVDA 188
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 20/201 (9%)
Query: 32 LTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELG 91
L E + + + + N + + + V+++ + G
Sbjct: 91 LKELPEKMPKTLQELRVHENEIT---KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 147
Query: 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151
+ L + + N+ I GL L L L N++T + L L K+ L
Sbjct: 148 GMKKLSYIRIADTNITTIPQ---GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 204
Query: 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---- 207
N ++ L N L ELHL+ N+L ++ I +Y + N++ +
Sbjct: 205 NSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD---HKYIQVVYLHNNNISAIGSND 261
Query: 208 -------CHLSQLKVADFSYN 221
+ N
Sbjct: 262 FCPPGYNTKKASYSGVSLFSN 282
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 22/118 (18%), Positives = 35/118 (29%), Gaps = 29/118 (24%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI---------------- 134
GL L EL L GN + + L L L L L N ++
Sbjct: 168 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 227
Query: 135 -------PPEIGNLTGLVKINLQSNGLTG------RLPAELGNLISLEELHLDRNRLQ 179
P + + + + L +N ++ P S + L N +Q
Sbjct: 228 NNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.9 bits (157), Expect = 7e-12
Identities = 45/306 (14%), Positives = 92/306 (30%), Gaps = 38/306 (12%)
Query: 350 FSRQELEVACEDFSN------IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLEL 403
F RQEL + +GS V + + + +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK- 62
Query: 404 YFQREVADLARINHENTGKLLGYCRESSP---FTRMLVFDYASNGTLYEHLHYGERCQVS 460
RE+ L + HEN LL + F + + + L + +
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT--- 119
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ I RGLKY+H+ +L S + + ED K++DF +
Sbjct: 120 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD---------- 570
T + L H + +I++ G ++ E+++GR
Sbjct: 177 GYVATRWYRAP----EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 571 KGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVI--------CEVVNLCVNPDITKR 622
+ A+ ++ + L + + +++ + D KR
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 623 PSMQEL 628
+ +
Sbjct: 293 ITAAQA 298
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 64.0 bits (154), Expect = 1e-11
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 21 CNAFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDARD--RVLKIN 76
CN + AL K+ + +P LS+W D C+ W G+ C RV ++
Sbjct: 3 CNP---QDKQALLQIKKDL-GNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLD 56
Query: 77 ISGSSLKGF--LAPELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGP 133
+SG +L + L L YL L + G NL+G IP + L +L L + ++G
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
IP + + LV ++ N L+G LP + +L +L + D NR+ GA+P
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 61.3 bits (147), Expect = 9e-11
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN-GLTGR-L 158
L N + G +P+ L LK L L++ N L G I P+ GNL +N L G L
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFDVSAYANNKCLCGSPL 309
Query: 159 PA 160
PA
Sbjct: 310 PA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 60.9 bits (146), Expect = 1e-10
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
DL N++ G +P + L L +N+ N L G +P + GNL + N+ P
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 52.4 bits (124), Expect = 6e-08
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 58 CHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117
+ + +++ + + G L L L +L L + NNL G IP + G L
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNL 290
Query: 118 KRLKILDLGTNQ-LTG-PIPP 136
+R + N+ L G P+P
Sbjct: 291 QRFDVSAYANNKCLCGSPLPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 51.3 bits (121), Expect = 2e-07
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 27/91 (29%)
Query: 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207
+L++N + G LP L L L L++ N L G +P G N
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN-------------------- 289
Query: 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPSTS 238
L + V+ ++ N + P LP+ +
Sbjct: 290 --LQRFDVSAYANNKCLCGSP-----LPACT 313
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 62.6 bits (151), Expect = 3e-11
Identities = 38/298 (12%), Positives = 96/298 (32%), Gaps = 45/298 (15%)
Query: 360 EDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN- 416
+D+ +G S V++ E V+ + + +RE+ L +
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK------IKREIKILENLRG 88
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
N L ++ T LVF++ +N + ++ + I + L
Sbjct: 89 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALD 143
Query: 477 YLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL 535
Y H+ ++ V + E +L+D+ + ++ + S+
Sbjct: 144 YCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGP- 198
Query: 536 PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN---------------LVDWAKD 580
++ + D ++++ G +L +I + P N L D+
Sbjct: 199 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 258
Query: 581 Y-----LELPEVMSYVVDPELKHFSYDDLKVIC-----EVVNLCVNPDITKRPSMQEL 628
Y +++ + F + + + + + ++ + D R + +E
Sbjct: 259 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (151), Expect = 4e-11
Identities = 37/288 (12%), Positives = 85/288 (29%), Gaps = 45/288 (15%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
V I + + + RE+ + +NH+N LL
Sbjct: 33 VCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 434 ----TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
LV + + ++ R ++ + G+K+LH+
Sbjct: 92 EEFQDVYLVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHS---AGIIHR 143
Query: 490 ELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGN 549
+L S + + D + K++DF + T P + +
Sbjct: 144 DLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 200
Query: 550 IYAFGVLLLEIISGRPP--------------------CCKDKGNLVDWAKDYLE------ 583
I++ G ++ E++ + C + L ++Y+E
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA 260
Query: 584 ---LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
P++ + P + ++++ + D KR S+ +
Sbjct: 261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 62.5 bits (151), Expect = 4e-11
Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 27/266 (10%)
Query: 360 EDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417
+ F I +G+ V K + + K++ + E L +N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL ++ +V +Y + G ++ HL + S I +Y
Sbjct: 101 PFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEY 156
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPS 537
LH+ +L + + + ++ DF K + R+ GT + P
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----ALAPE 208
Query: 538 SLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597
+ ++ + + +A GVL+ E+ +G PP +A +++ E +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF---------FADQPIQIYEKIVSGKVRFPS 259
Query: 598 HFSYDDLKVICEVVNLCVNPDITKRP 623
HFS D + +++ + D+TKR
Sbjct: 260 HFSSD----LKDLLRNLLQVDLTKRF 281
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.2 bits (134), Expect = 5e-09
Identities = 49/303 (16%), Positives = 86/303 (28%), Gaps = 54/303 (17%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-----------K 422
V+ + + ++ +T + E+ L R+N + K
Sbjct: 29 VWLAKDMVNNTHVAMKIVRGDKVYTEA----AEDEIKLLQRVNDADNTKEDSMGANHILK 84
Query: 423 LLGYCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTE 481
LL + P +V + G L E + +I + GL Y+H
Sbjct: 85 LLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR 144
Query: 482 LGPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE 540
G T ++ V + D L+ A T Q P L
Sbjct: 145 CGIIHT--DIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLL 202
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL------------------ 582
+I++ L+ E+I+G D+G+ D++
Sbjct: 203 GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 262
Query: 583 -----------------ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625
+L V E FS D+ K I + ++ + D KR
Sbjct: 263 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 322
Query: 626 QEL 628
L
Sbjct: 323 GGL 325
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 52.1 bits (124), Expect = 2e-08
Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 17/158 (10%)
Query: 364 NIIGSSPDSLVYKGTMKGGPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINH 417
++G +S V+ + E V + K + Y +L+F AR
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
KL G V+ + N L E + E +V +++ I +
Sbjct: 66 RALQKLQGLAV-------PKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAK 118
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
+ +L+ V ++ + ++DF +
Sbjct: 119 FYH---RGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEV 152
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 5e-07
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
L+EL + N LI + L RL+ L N L +P NL +++++ N
Sbjct: 283 PPSLEELNVSNNKLIELPA----LPPRLERLIASFNHLAE-VPELPQNLK---QLHVEYN 334
Query: 153 GLTGRLPAELGNLISLEELHLD 174
L P S+E+L ++
Sbjct: 335 PLRE-FPDIPE---SVEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 5e-07
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 101 LHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA 160
+ N I L L+ L++ N+L +P L L N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLERL---IASFNHLA-EVPE 321
Query: 161 ELGNLISLEELHLDRNRLQG 180
N L++LH++ N L+
Sbjct: 322 LPQN---LKQLHVEYNPLRE 338
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148
L L+ LI N+L + L + LK L + N L P ++ L ++N
Sbjct: 301 ALPPRLERLIASFNHLAEVPE----LPQNLKQLHVEYNPLRE-FPDIPESVEDL-RMN 352
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.2 bits (115), Expect = 1e-06
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 96 LQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQ 150
+Q L + L EL LL++ +++ L LT I + L ++NL+
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG 180
SN L + + + + LQ
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (104), Expect = 2e-05
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 120 LKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLD 174
++ LD+ +L+ E+ L + L GLT + + L +L EL+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 175 RNRLQGA 181
N L
Sbjct: 64 SNELGDV 70
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 4e-05
Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 74 KINISGSSLKGFLAPEL-GLLTYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTN 128
++I L EL LL Q + L L I L + L L+L +N
Sbjct: 6 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN 65
Query: 129 QLTGPIPPEIGNLTGLVKINLQSNGLTG 156
+L + +Q L
Sbjct: 66 ELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 9e-05
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 9/81 (11%)
Query: 94 TYLQELILHGNNL----IGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-----NLTGL 144
+ L+ L L ++ + L L+ LDL N L ++ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 145 VKINLQSNGLTGRLPAELGNL 165
++ L + + L L
Sbjct: 429 EQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 0.001
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 118 KRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI-----SL 168
L++L L ++ + + L +++L +N L +L + L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 169 EELHLDRNRLQGAVP 183
E+L L +
Sbjct: 429 EQLVLYDIYWSEEME 443
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 34/175 (19%), Positives = 59/175 (33%), Gaps = 5/175 (2%)
Query: 53 LDADPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK 112
LD G + + + ++L+ L L L LHGN + + +
Sbjct: 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171
Query: 113 ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELH 172
L L L L N++ P +L L+ + L +N L+ L L +L+ L
Sbjct: 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231
Query: 173 LDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC--HLSQLKVADFSYNFFVG 225
L+ N A + SS+ + L+ + + N G
Sbjct: 232 LNDNPWVCDCR---ARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (86), Expect = 0.003
Identities = 40/178 (22%), Positives = 57/178 (32%), Gaps = 11/178 (6%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
C + + + L+ P G+ Q + LHGN + + + L IL
Sbjct: 6 CVCYNEPKVTTSCPQQGLQAV--PV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILW 62
Query: 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVP 183
L +N L L L +++L N + PA L L LHLDR LQ P
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGP 122
Query: 184 AGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236
A + +Y L L L L N + L S
Sbjct: 123 --GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.9 bits (103), Expect = 6e-06
Identities = 26/121 (21%), Positives = 38/121 (31%), Gaps = 29/121 (23%)
Query: 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL---------- 120
RVL +++ L L L + L L N L + P L L+ L
Sbjct: 1 RVL--HLAHKDLTVL--CHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNAL 55
Query: 121 ------------KILDLGTNQLTG-PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167
+ L L N+L + + LV +NLQ N L L
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAE 114
Query: 168 L 168
+
Sbjct: 115 M 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.2 bits (88), Expect = 5e-04
Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
++L LT L L+ + L L NRL+ PA + + + N+ G
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 207 LCHLSQLKVADFSYNFFVG-SIPKCLEYLPS 236
+ +L +L+ N + + L P
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPR 91
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (104), Expect = 6e-06
Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 3/102 (2%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLV 145
P+L L +++ + + L L+L N+L + + L
Sbjct: 36 PDLVAQNIDVVLNR-RSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK 94
Query: 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
+NL N L + + LEEL LD N L S
Sbjct: 95 ILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.9 bits (102), Expect = 3e-05
Identities = 15/126 (11%), Positives = 43/126 (34%), Gaps = 3/126 (2%)
Query: 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP 133
++++G +L + L L + + + + + R++ +DL + +
Sbjct: 4 TLDLTGKNLHPDVTGRL-LSQGVIAFRCPRSFMDQPLAEHFSPF-RVQHMDLSNSVIEVS 61
Query: 134 IPPEI-GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTA 192
I + L ++L+ L+ + L +L L+L + +
Sbjct: 62 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121
Query: 193 NIHGMY 198
+ +
Sbjct: 122 RLDELN 127
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.6 bits (99), Expect = 3e-05
Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 10/140 (7%)
Query: 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146
A + +EL L G I +I L + +D N++ L L
Sbjct: 11 AAQYTNAVRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDNEI--RKLDGFPLLRRLKT 67
Query: 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN--- 203
+ + +N + L L EL L N L + + + +
Sbjct: 68 LLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNK 127
Query: 204 ----LTGLCHLSQLKVADFS 219
L + + Q++V DF
Sbjct: 128 KHYRLYVIYKVPQVRVLDFQ 147
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 43.1 bits (100), Expect = 4e-05
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147
L L+ L L N + I P L L L + L NQ++ P + N + L +
Sbjct: 167 TPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222
Query: 148 NLQSN 152
L +N
Sbjct: 223 TL-TN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 19/102 (18%), Positives = 26/102 (25%), Gaps = 6/102 (5%)
Query: 29 FWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINI-SGSSLKGFLA 87
L I L + A L + +
Sbjct: 131 LQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI-- 188
Query: 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129
L L L E+ L N + + P L L I+ L TNQ
Sbjct: 189 SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL-TNQ 227
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.9 bits (89), Expect = 0.001
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
L + G + +T + +L G+ ++ G+T + + L +L L L N
Sbjct: 18 LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELKDN 73
Query: 177 RLQ 179
++
Sbjct: 74 QIT 76
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
+ E+ NL + P +L K IL L N L + T L ++NL
Sbjct: 9 VASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 9e-04
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
+ ++ LT +PP++ ++L N L A L L +L+LDR
Sbjct: 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 177 R 177
Sbjct: 66 E 66
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.002
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 137 EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYT 191
E+ + +++N LT LP +L LHL N L + YT
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLPK--DTTILHLSENLLYT-FSLATLMPYT 55
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.2 bits (87), Expect = 0.002
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 102 HGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152
NNL + L L+ L L L N L IP L L N
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.003
Identities = 15/65 (23%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Query: 65 CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124
S L++N +L P L L L N L L RL L+
Sbjct: 6 VSKV-ASHLEVNCDKRNLTAL--PP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 125 LGTNQ 129
L +
Sbjct: 62 LDRAE 66
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 40.0 bits (92), Expect = 4e-04
Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 117 LKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
+L +T + L + +I ++ + + L ++ +L L+ N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 177 RLQGAVPAGSNSGYTANIHGMY 198
+L P +
Sbjct: 79 KLTDIKPLANLKNLGWLFLDEN 100
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 658 | |||
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.89 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.78 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.73 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.71 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.68 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.65 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.63 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.62 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.54 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.51 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.5 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.49 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.48 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.42 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.39 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.38 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.38 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.38 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.36 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.36 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.34 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.32 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.26 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.22 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.18 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.13 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.12 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.07 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.9 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.71 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.68 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.47 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.42 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.37 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.28 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.19 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.13 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.1 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.09 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.91 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.71 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.33 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.03 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.99 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.71 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.39 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.24 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 94.27 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.8e-53 Score=431.77 Aligned_cols=269 Identities=19% Similarity=0.318 Sum_probs=202.5
Q ss_pred ccHHHHHHHHhhhc-----------ccccCCCCeeEEEEEecC-CC---eEEEEEEeeeccccchhhHHHHHHHHHHHHh
Q 006178 350 FSRQELEVACEDFS-----------NIIGSSPDSLVYKGTMKG-GP---EIAVISLCIKEEHWTGYLELYFQREVADLAR 414 (658)
Q Consensus 350 ~~~~~l~~~~~~f~-----------~~lG~G~~g~Vy~~~~~~-~~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~ 414 (658)
++++|+..++.+|. ++||+|+||+||+|+++. ++ .||||++... ......++|.+|+++|++
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~ 83 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG---YTEKQRRDFLSEASIMGQ 83 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS---CCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc---cCHHHHHHHHHHHHHHHh
Confidence 45666666666663 679999999999999863 32 4666665322 223445679999999999
Q ss_pred ccCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 415 INHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 415 l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
++|||||+++|++.+.+ ..++|||||++|+|.+++..... .+++.++..|+.|||+||+|||++ +|+||||||+
T Consensus 84 l~HpnIv~l~g~~~~~~--~~~iv~Ey~~~g~L~~~~~~~~~-~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~ 157 (299)
T d1jpaa_ 84 FDHPNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAAR 157 (299)
T ss_dssp CCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred CCCCCCccEEEEEeeCC--EEEEEEEecCCCcceeeeccccC-CCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccc
Confidence 99999999999998877 67999999999999998875443 599999999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCC--Cc-ccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCC
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNP--GT-LGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKD 570 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~--~~-~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~ 570 (658)
|||++.++++||+|||+|+.+........ .. ...++..|||||.+.++.++.++|||||||++|||+| |+.||.+.
T Consensus 158 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~ 237 (299)
T d1jpaa_ 158 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237 (299)
T ss_dssp GEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC
Confidence 99999999999999999987654322211 11 1234567999999999999999999999999999998 89999654
Q ss_pred CCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 571 KGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
... +........ .....+...+..+.+|+.+||+.||++|||+.||++.|+++++.+
T Consensus 238 ~~~--~~~~~i~~~----------~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p 294 (299)
T d1jpaa_ 238 TNQ--DVINAIEQD----------YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 294 (299)
T ss_dssp CHH--HHHHHHHTT----------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CHH--HHHHHHHcC----------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcCh
Confidence 322 111111111 111223345567889999999999999999999999999987643
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-52 Score=418.38 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=200.4
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||+||+|++++ .||||++..... .....+.|.+|++++++++|||||+++|++.++ ..++||||
T Consensus 12 ~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~---~~~lv~Ey 84 (276)
T d1uwha_ 12 VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQW 84 (276)
T ss_dssp CCSEEEECSSCEEEEEESSS--EEEEEECCCSSC--CTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred EEEEEeeCCCcEEEEEEECC--EEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc---EEEEEEec
Confidence 45889999999999998754 599998854332 233457899999999999999999999998654 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.+++..... .+++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+........
T Consensus 85 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~ 160 (276)
T d1uwha_ 85 CEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160 (276)
T ss_dssp CCEEEHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred CCCCCHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence 999999999975433 599999999999999999999999 9999999999999999999999999999876543332
Q ss_pred CCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH--HHHHHhhcCCcccccccCCcC
Q 006178 522 NPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV--DWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.......++..|||||++.+ ..|+.++|||||||++|||+||+.||.+...... ..+.... ..+..
T Consensus 161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~---------~~p~~ 231 (276)
T d1uwha_ 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY---------LSPDL 231 (276)
T ss_dssp -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTS---------CCCCG
T ss_pred ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCC---------CCCcc
Confidence 23333445678999999864 4589999999999999999999999976443211 1111111 11222
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+..+++.+.+|+.+||+.||++|||++||++.|+.+.+.
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 223334456788999999999999999999999999987654
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-53 Score=420.24 Aligned_cols=252 Identities=19% Similarity=0.244 Sum_probs=195.5
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+++.||||++.... ...++|.+|++++++++|||||+++|+|.+.+ ..++||||
T Consensus 9 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~--~~~lv~E~ 81 (263)
T d1sm2a_ 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEF 81 (263)
T ss_dssp EEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEEC
T ss_pred EEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-----CcHHHHHHHHHHHHhcCCCCcccccceeccCC--ceEEEEEe
Confidence 458899999999999999988899999985322 22457999999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... ..+++..+..|+.|||+||+|||++ +|+||||||+|||+|+++.+||+|||+|+........
T Consensus 82 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 157 (263)
T d1sm2a_ 82 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157 (263)
T ss_dssp CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred cCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCce
Confidence 99999999987543 3689999999999999999999999 9999999999999999999999999999876433221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhC-CCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISG-RPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||++.+..++.++|||||||++|||+|+ ++||.... ..+......... ....+
T Consensus 158 -~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~--~~~~~~~i~~~~----------~~~~p 224 (263)
T d1sm2a_ 158 -SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDISTGF----------RLYKP 224 (263)
T ss_dssp --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC--HHHHHHHHHHTC----------CCCCC
T ss_pred -eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC--HHHHHHHHHhcC----------CCCCc
Confidence 11223345679999999999999999999999999999995 55554322 222222111110 01122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
..+++++.+++.+||+.||++||||+||+++|+++.+
T Consensus 225 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 2334678899999999999999999999999998764
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-51 Score=411.24 Aligned_cols=249 Identities=15% Similarity=0.180 Sum_probs=198.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+|++. +++.||||++...... ...+.+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~---~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~--~~~ivmE 83 (271)
T d1nvra_ 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLE 83 (271)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc--eeEEEEe
Confidence 4489999999999999986 6789999998644321 22356899999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++..+. .+++.++..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 84 y~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~ 158 (271)
T d1nvra_ 84 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158 (271)
T ss_dssp CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ccCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCc
Confidence 999999999997554 599999999999999999999999 999999999999999999999999999987654332
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
........+++.|||||++.+..+ +.++||||+||++|||+||+.||.........+....... .. ...
T Consensus 159 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~-~~---------~~~ 228 (271)
T d1nvra_ 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-TY---------LNP 228 (271)
T ss_dssp ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTC-TT---------STT
T ss_pred cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CC---------CCc
Confidence 222333456778999999988876 5789999999999999999999975543322222111110 00 001
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
....+.++.+|+.+||+.||++|||++|+++
T Consensus 229 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 229 WKKIDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1223456789999999999999999999865
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-52 Score=419.11 Aligned_cols=252 Identities=16% Similarity=0.258 Sum_probs=201.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++++++.||||++.... ...+.|.+|++++++++|||||+++|++.++ ..++||||
T Consensus 17 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---~~~iv~Ey 88 (272)
T d1qpca_ 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEY 88 (272)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred EeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-----CCHHHHHHHHHHHHhCCCCCEeEEEeeeccC---CeEEEEEe
Confidence 458899999999999999988899999884322 2245799999999999999999999988654 45899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++.++++|+.||++||+|||++ +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~- 164 (272)
T d1qpca_ 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY- 164 (272)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCcc-
Confidence 9999999988755545699999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.......++..|+|||.+.++.++.++|||||||++|||+||..|+...... .+........ .....+.
T Consensus 165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-~~~~~~i~~~----------~~~~~p~ 233 (272)
T d1qpca_ 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNLERG----------YRMVRPD 233 (272)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTT----------CCCCCCT
T ss_pred ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhc----------CCCCCcc
Confidence 1122233456799999999999999999999999999999976555433221 1111111111 0111223
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
..++++.+|+.+||+.||++||||+||++.|++..
T Consensus 234 ~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 34567889999999999999999999999998753
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.4e-52 Score=418.91 Aligned_cols=257 Identities=21% Similarity=0.266 Sum_probs=205.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||+||+|++. +++.||||++.... ...++|.+|++++++++|||||+++|+|.+.+ ..++||
T Consensus 20 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv~ 92 (287)
T d1opja_ 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIIT 92 (287)
T ss_dssp EEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred EEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-----chHHHHHHHHHHHHhCCCCCEecCCccEeeCC--eeEEEe
Confidence 34589999999999999986 47789999874322 22457999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||++|+|.+++.......+++..+..|+.||++||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~ 169 (287)
T d1opja_ 93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169 (287)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence 999999999999876666799999999999999999999999 99999999999999999999999999998754322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. ......++..|+|||++.+..|+.++|||||||++|||+||..|+..... ....... .... .....
T Consensus 170 ~~-~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-~~~~~~~-i~~~---------~~~~~ 237 (287)
T d1opja_ 170 YT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL-LEKD---------YRMER 237 (287)
T ss_dssp SE-EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHH-HHTT---------CCCCC
T ss_pred ce-eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-HHHHHHH-HhcC---------CCCCC
Confidence 11 11112245679999999999999999999999999999997776643322 1111111 1110 00122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
+...++.+.+|+.+||+.||++|||++||++.|+.+.+..
T Consensus 238 ~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~~ 277 (287)
T d1opja_ 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277 (287)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSSS
T ss_pred CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhC
Confidence 3334567889999999999999999999999999876543
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-51 Score=408.41 Aligned_cols=250 Identities=18% Similarity=0.258 Sum_probs=204.9
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
|.+.||+|+||+||+|++++++.||||++..... ..++|.+|++++++++|||||+++|+|.+++ ..++||||
T Consensus 8 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-----~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~--~~~iv~Ey 80 (258)
T d1k2pa_ 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEY 80 (258)
T ss_dssp CCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-----CHHHHHHHHHHHHTCCCTTBCCEEEEECCSS--SEEEEEEC
T ss_pred EeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-----CHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--ceEEEEEc
Confidence 5689999999999999999888999999864332 2457999999999999999999999998877 68999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++..... .+++..+.+++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++.+.....
T Consensus 81 ~~~g~l~~~~~~~~~-~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~- 155 (258)
T d1k2pa_ 81 MANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY- 155 (258)
T ss_dssp CTTEEHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC-
T ss_pred cCCCcHHHhhhcccc-CCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCc-
Confidence 999999999765433 589999999999999999999999 999999999999999999999999999986543322
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.......++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +........ .....+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~--~~~~~i~~~----------~~~~~p 223 (258)
T d1k2pa_ 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQG----------LRLYRP 223 (258)
T ss_dssp CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTT----------CCCCCC
T ss_pred eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH--HHHHHHHhC----------CCCCCc
Confidence 22222345567999999999999999999999999999998 89999755422 222211111 111122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
...++++.+|+.+||+.||++|||++||++.|.++
T Consensus 224 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred ccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 33446788999999999999999999999999764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-51 Score=412.20 Aligned_cols=250 Identities=18% Similarity=0.253 Sum_probs=200.9
Q ss_pred cccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+||+|+||+||+|.++ ++..||||++.... .....++|.+|+++|++++|||||+++|++.++ ..++||||
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~---~~~lvmE~ 89 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEM 89 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEEC
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhc---CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC---eEEEEEEe
Confidence 4999999999999875 34468999875322 233456899999999999999999999999754 46899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.+++.... ..+++.++..|+.|||+||+|||++ +|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 90 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 90 AGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp CTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence 99999999986443 3699999999999999999999999 9999999999999999999999999999876543221
Q ss_pred -CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 -NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 -~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.......+++.|+|||++.++.++.++|||||||++|||+| |+.||...... +....... ......
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~~i~~----------~~~~~~ 233 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQ----------GKRMEC 233 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHT----------TCCCCC
T ss_pred cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHHHHHc----------CCCCCC
Confidence 12223345677999999999999999999999999999998 99999764432 11111111 111123
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
+...+.++.+|+.+||+.||++||||.+|++.|+...
T Consensus 234 p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 234 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 3445577889999999999999999999999998654
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-51 Score=413.81 Aligned_cols=258 Identities=19% Similarity=0.290 Sum_probs=198.2
Q ss_pred hcccccCCCCeeEEEEEecCC-----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG-----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.++||+|+||.||+|+++++ ..||||++.... .....++|.+|++++++++|||||+++|++.+.+ ..+
T Consensus 11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~--~~~ 85 (283)
T d1mqba_ 11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMM 85 (283)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEE
T ss_pred eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc---ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC--ceE
Confidence 458899999999999997643 368899874322 2334567999999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+.+|++.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 86 ~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~ 161 (283)
T d1mqba_ 86 IITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 161 (283)
T ss_dssp EEEECCTTEEHHHHHHHTTT-CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEEecccCcchhhhhcccc-cccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhccc
Confidence 99999999999998875443 599999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCCCCc-ccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGT-LGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~-~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
......... ...++..|+|||++.++.++.++|||||||++|||+||..|+..... ..+....... ..
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~-~~~~~~~i~~----------~~ 230 (283)
T d1mqba_ 162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-NHEVMKAIND----------GF 230 (283)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-HHHHHHHHHT----------TC
T ss_pred CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC-HHHHHHHHhc----------cC
Confidence 433222222 22345679999999999999999999999999999997666543322 1222221111 11
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
....+...+..+.+|+.+||+.||++||||.||++.|+++++.+
T Consensus 231 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p 274 (283)
T d1mqba_ 231 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274 (283)
T ss_dssp CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence 11233345577899999999999999999999999999987754
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-51 Score=411.39 Aligned_cols=253 Identities=19% Similarity=0.220 Sum_probs=190.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+|++. +|+.||+|.+..... .....+.+.+|++++++++|||||++++++.+......|+|||
T Consensus 8 ~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmE 85 (269)
T d2java1 8 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 85 (269)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS--CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEE
T ss_pred EeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC--CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEe
Confidence 4489999999999999986 578899998855432 2334567999999999999999999999997654336799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTEL--GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 441 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
||++|+|.+++.+. ....+++..++.++.||+.||+|||++. ..+|+||||||+|||+++++.+||+|||+|+.+.
T Consensus 86 y~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~ 165 (269)
T d2java1 86 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 165 (269)
T ss_dssp CCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-
T ss_pred cCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecc
Confidence 99999999998642 2346999999999999999999999871 1149999999999999999999999999998865
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
...... ....+++.|+|||++.+..|+.++|||||||++|||+||+.||..... .+....... ...
T Consensus 166 ~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--~~~~~~i~~----------~~~ 231 (269)
T d2java1 166 HDTSFA--KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIRE----------GKF 231 (269)
T ss_dssp ------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHH----------TCC
T ss_pred cCCCcc--ccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--HHHHHHHHc----------CCC
Confidence 332222 223346679999999999999999999999999999999999975432 222111111 111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...+...++++.+|+.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 232 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1223334567889999999999999999999875
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-51 Score=410.56 Aligned_cols=250 Identities=22% Similarity=0.297 Sum_probs=198.1
Q ss_pred ccccCCCCeeEEEEEecC---CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~---~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
++||+|+||+||+|.+++ ++.||||++.... .+....++|.+|++++++++|||||+++|+|.++ ..++|||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~---~~~lvmE 87 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 87 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh--CCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC---CEEEEEE
Confidence 579999999999998753 3579999885432 2234456899999999999999999999999654 4589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.++++... .+++.++..|+.||++||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 88 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~ 162 (277)
T d1xbba_ 88 MAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162 (277)
T ss_dssp CCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred cCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccccc
Confidence 999999999998654 499999999999999999999999 999999999999999999999999999987543222
Q ss_pred C-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 K-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .......+++.|+|||.+.+..++.++|||||||++|||+| |+.||.+.... +...... . .....
T Consensus 163 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--~~~~~i~-~---------~~~~~ 230 (277)
T d1xbba_ 163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLE-K---------GERMG 230 (277)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHH-T---------TCCCC
T ss_pred ccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--HHHHHHH-c---------CCCCC
Confidence 1 11222345677999999999999999999999999999998 89999754322 1111111 1 11112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.+..++.++.+|+.+||+.||++|||++||++.|+..
T Consensus 231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 3334557788999999999999999999999988764
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-50 Score=404.99 Aligned_cols=247 Identities=18% Similarity=0.248 Sum_probs=199.8
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||+||+|++. +|+.||+|++...... ..+.+.+|++++++++|||||++++++.+.+ ..|+||
T Consensus 23 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivm 96 (293)
T d1yhwa1 23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVM 96 (293)
T ss_dssp CSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh----HHHHHHHHHHHHHhCCCCCEeeEeEEEEECC--EEEEEE
Confidence 33488999999999999975 6889999988644322 2457899999999999999999999999887 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||++|+|.+++.++ .+++.++..|+.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+.+....
T Consensus 97 Ey~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~ 170 (293)
T d1yhwa1 97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (293)
T ss_dssp ECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence 999999999988754 499999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......+++.|+|||++.+..++.++|||||||++|||+||+.||......... ....... .+.. ..
T Consensus 171 ~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~~~~~~-------~~~~-~~ 238 (293)
T d1yhwa1 171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIATNG-------TPEL-QN 238 (293)
T ss_dssp C--CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHHHC-------SCCC-SS
T ss_pred c--cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH--HHHHhCC-------CCCC-CC
Confidence 2 222334567899999999999999999999999999999999999754422111 1111100 0000 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 239 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp GGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23344678899999999999999999999763
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-50 Score=401.93 Aligned_cols=245 Identities=20% Similarity=0.256 Sum_probs=200.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||+||+|+++ +++.||+|.+..... ......+.+.+|++++++++|||||++++++.+.+ ..++||
T Consensus 9 ~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ivm 85 (263)
T d2j4za1 9 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLIL 85 (263)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHc-cChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC--EEEEEE
Confidence 34589999999999999986 577899998754321 12234567899999999999999999999999887 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||++|+|.+++.... .+++.++..|+.||++||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 86 Ey~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~-- 158 (263)
T d2j4za1 86 EYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-- 158 (263)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC--
T ss_pred eecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCC--
Confidence 9999999999997544 499999999999999999999999 999999999999999999999999999976432
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.......+++.|+|||++.+..++.++|||||||++|||+||+.||..... .+.......... .+
T Consensus 159 --~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~-----------~~ 223 (263)
T d2j4za1 159 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--QETYKRISRVEF-----------TF 223 (263)
T ss_dssp --CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTTCC-----------CC
T ss_pred --CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCC-----------CC
Confidence 122333456789999999999999999999999999999999999965432 222222221111 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
+...++++.+|+.+||+.||++|||++|+++
T Consensus 224 p~~~s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 224 PDFVTEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 2234467889999999999999999999986
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-50 Score=415.96 Aligned_cols=255 Identities=22% Similarity=0.307 Sum_probs=200.4
Q ss_pred hhcccccCCCCeeEEEEEecCC------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGG------PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||+||+|++... ..||+|++..... ......+.+|+.++.++ +|||||++++++.+.+
T Consensus 40 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-- 114 (325)
T d1rjba_ 40 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLLGACTLSG-- 114 (325)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred EEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC---HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC--
Confidence 4558999999999999997532 2578887743322 22345789999999999 8999999999999887
Q ss_pred ceEEEEEecCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCC
Q 006178 434 TRMLVFDYASNGTLYEHLHYGER---------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlk 492 (658)
..++|||||++|+|.++++.+.. ..+++..++.|+.||++||+|||++ +|||||||
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlK 191 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 191 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCc
Confidence 67999999999999999975431 3589999999999999999999999 99999999
Q ss_pred CcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCC
Q 006178 493 SSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDK 571 (658)
Q Consensus 493 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~ 571 (658)
|+|||++.++.+||+|||+|+...............+++.|||||++.++.++.++|||||||++|||+| |+.||.+..
T Consensus 192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~ 271 (325)
T d1rjba_ 192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271 (325)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999987654333222223334677999999999999999999999999999998 899997644
Q ss_pred CcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 572 GNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
....-. ....... . ...+...++++.+|+.+||+.||++|||++||+++|..
T Consensus 272 ~~~~~~--~~~~~~~------~---~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 323 (325)
T d1rjba_ 272 VDANFY--KLIQNGF------K---MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323 (325)
T ss_dssp CSHHHH--HHHHTTC------C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHH--HHHhcCC------C---CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence 322111 1111100 0 11233445678999999999999999999999999963
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-49 Score=395.27 Aligned_cols=248 Identities=20% Similarity=0.227 Sum_probs=194.3
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--CCCceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~~~l 437 (658)
.|.++||+|+||+||+|++. ++..||+|++..... .....+.|.+|++++++++|||||++++++.+. +....++
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i 89 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 89 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence 35578999999999999986 567899998865432 233456799999999999999999999998652 2225799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeec-CCCCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLT-EDFSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGla~~ 514 (658)
||||+++|+|.+++.+.. .+++.++..++.||++||+|||++ + |+||||||+|||++ +++.+||+|||+|+.
T Consensus 90 vmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~ 164 (270)
T d1t4ha_ 90 VTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 164 (270)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence 999999999999997654 499999999999999999999998 6 99999999999996 578999999999975
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
... .......+++.|||||.+.+ .++.++|||||||++|||+||+.||...... ....+....... ...
T Consensus 165 ~~~----~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~-~~~~~~i~~~~~--~~~--- 233 (270)
T d1t4ha_ 165 KRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSGVK--PAS--- 233 (270)
T ss_dssp CCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTTCC--CGG---
T ss_pred ccC----CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccH-HHHHHHHHcCCC--Ccc---
Confidence 322 11223345778999998865 6999999999999999999999999654322 222222211100 000
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
++...++++.+|+.+||+.||++|||++|+++
T Consensus 234 ----~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 234 ----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp ----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----cCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 11112345789999999999999999999976
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-50 Score=411.02 Aligned_cols=255 Identities=22% Similarity=0.278 Sum_probs=204.4
Q ss_pred cccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 363 SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.||+|+||+||+|+++ +++.||||++.... .....++|.+|++++++++||||+++++++.+.+ ..+
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~--~~~ 92 (301)
T d1lufa_ 18 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PMC 92 (301)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCE
T ss_pred eEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc---ChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC--ceE
Confidence 489999999999999975 34689999874322 2344668999999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 437 LVFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
+||||+++|+|.+++.... ...+++.+++.|+.|++.||+|||++ +||||||||+
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp~ 169 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATR 169 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEccc
Confidence 9999999999999986321 23489999999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCC-CCCCCCCCc
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGR-PPCCKDKGN 573 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~-~p~~~~~~~ 573 (658)
|||+|.++.+||+|||+|+.+.............+++.|+|||.+.+..|+.++|||||||++|||+||. +||......
T Consensus 170 NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~ 249 (301)
T d1lufa_ 170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 249 (301)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred ceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHH
Confidence 9999999999999999998775544333333344567799999999999999999999999999999996 566544322
Q ss_pred HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+...... +......+...+.++.+|+.+||+.||++||||.||+++|+++.+
T Consensus 250 --e~~~~v~----------~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 250 --EVIYYVR----------DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp --HHHHHHH----------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --HHHHHHH----------cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 2211111 111222334445678999999999999999999999999998753
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-50 Score=410.19 Aligned_cols=255 Identities=17% Similarity=0.229 Sum_probs=198.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|++. +|+.||+|++..... ....+++.+|+.+|++++|||||+++++|.+.+ +.++||||
T Consensus 11 ~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~iVmEy 85 (322)
T d1s9ja_ 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEH 85 (322)
T ss_dssp EEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC---TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEEc
Confidence 388999999999999986 577888888754322 234567899999999999999999999999887 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
+++|+|.+++.+.+ .+++..+..++.|+++||+|||+ + +|+||||||+|||+++++++||+|||+|+.+.....
T Consensus 86 ~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 160 (322)
T d1s9ja_ 86 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160 (322)
T ss_dssp CTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC
T ss_pred CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCccccCCCcc
Confidence 99999999997654 49999999999999999999996 6 899999999999999999999999999997654322
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc-------------
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV------------- 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~------------- 587 (658)
....++..|+|||++.+..|+.++||||+||++|||+||+.||....................
T Consensus 161 ----~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (322)
T d1s9ja_ 161 ----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236 (322)
T ss_dssp -------CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred ----ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence 122456779999999999999999999999999999999999976543322111000000000
Q ss_pred c-----------------ccccCCcCCCCC-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 M-----------------SYVVDPELKHFS-YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~-----------------~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ...........+ ...+.++.+|+.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ---------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0 000000000000 1123568899999999999999999999874
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-50 Score=406.53 Aligned_cols=256 Identities=16% Similarity=0.216 Sum_probs=200.5
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
..+.+.||+|+||.||+|++++++.||||++..... ..+.|.+|+.++++++|||||+++|++.+. ..++||
T Consensus 19 ~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~-----~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~---~~~lv~ 90 (285)
T d1fmka3 19 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVT 90 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC-----CHHHHHHHHHHHHhcccCCEeEEEEEEecC---CeEEEE
Confidence 345589999999999999999988999999843221 246799999999999999999999998653 458999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|..++.......++|.+++.|+.||++||+|||++ +|+||||||+|||+|+++++||+|||+|+.+....
T Consensus 91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~ 167 (285)
T d1fmka3 91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 167 (285)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence 999999999998765444699999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. .......+++.|+|||++.++.++.++|||||||++|||+||..|+...... .+........ . ..+.
T Consensus 168 ~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~~~~~~i~~~-~---------~~~~ 235 (285)
T d1fmka3 168 Y-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERG-Y---------RMPC 235 (285)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHHHTT-C---------CCCC
T ss_pred c-eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-HHHHHHHHhc-C---------CCCC
Confidence 2 2222334567899999999999999999999999999999977666443322 2222111111 0 0112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+...++++.+++.+||+.||++|||+++|++.|++....
T Consensus 236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 334456788999999999999999999999999986654
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-50 Score=403.15 Aligned_cols=248 Identities=17% Similarity=0.175 Sum_probs=196.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+|++. ++..||||++..... ...+.+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 16 i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~lvmE 89 (288)
T d2jfla1 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIE 89 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS----GGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH----HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--eEEEEEe
Confidence 3478999999999999986 577899998754322 23456889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
||++|+|.+++.+..+ .+++.++..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 90 y~~~g~L~~~~~~~~~-~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~ 165 (288)
T d2jfla1 90 FCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 165 (288)
T ss_dssp CCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH
T ss_pred cCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCcc
Confidence 9999999999865432 599999999999999999999999 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.. ....+++.|+|||++. ...|+.++|||||||++|||+||+.||......... ........ +
T Consensus 166 ~~--~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~--~~i~~~~~-------~- 233 (288)
T d2jfla1 166 RR--DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL--LKIAKSEP-------P- 233 (288)
T ss_dssp HH--TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH--HHHHHSCC-------C-
T ss_pred cc--cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHH--HHHHcCCC-------C-
Confidence 11 1223567799999984 456899999999999999999999999754432111 11111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+...+.++.+|+.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 234 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011223345678899999999999999999998763
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-50 Score=400.33 Aligned_cols=246 Identities=23% Similarity=0.319 Sum_probs=195.3
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
|.+.||+|+||.||+|+++ |+.||||++.... ..++|.+|++++++++|||||+++|++.+... ..++||||
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~lv~ey 82 (262)
T d1byga_ 11 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 82 (262)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECC
T ss_pred EeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH------HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC-cEEEEEec
Confidence 4588999999999999985 6789999884321 23579999999999999999999999865432 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++..+....+++..+++|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~-- 157 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 157 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCCC--
Confidence 9999999999765544689999999999999999999999 99999999999999999999999999998653222
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
....++..|+|||++.++.+++++|||||||++|||+| |+.||..... +...++.. ....+.
T Consensus 158 ---~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~-------------~~~~~~ 221 (262)
T d1byga_ 158 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-------------GYKMDA 221 (262)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-------------TCCCCC
T ss_pred ---ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-------------CCCCCC
Confidence 22334567999999999999999999999999999998 6888765432 22222211 111123
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
+...++++.+|+.+||+.||++||||.|++++|++++
T Consensus 222 ~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~ 258 (262)
T d1byga_ 222 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 258 (262)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 3344567889999999999999999999999999875
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-50 Score=402.14 Aligned_cols=251 Identities=20% Similarity=0.224 Sum_probs=200.0
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||+||+|++. +++.||||.+..... ......+.+.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~iv 86 (288)
T d1uu3a_ 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFG 86 (288)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSS--EEEEE
T ss_pred CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc-cCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECC--EEEEE
Confidence 345589999999999999985 678999998854321 12233467999999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 87 mEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~ 161 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161 (288)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccC
Confidence 99999999999987554 499999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
..........++..|+|||++.+..|+.++||||+||++|||+||+.||..... ............ .
T Consensus 162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~~~i~~~~~-----------~ 228 (288)
T d1uu3a_ 162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--YLIFQKIIKLEY-----------D 228 (288)
T ss_dssp --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHTTCC-----------C
T ss_pred CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH--HHHHHHHHcCCC-----------C
Confidence 333222333467789999999999999999999999999999999999975432 222222221111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
++...++++.+|+.+||+.||++|||++|+++.
T Consensus 229 ~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 229 FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp CCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred CCccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence 222334668899999999999999999987543
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-49 Score=401.64 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=204.2
Q ss_pred hhcccccCCCCeeEEEEEecCC----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+|.++||+|+||+||+|++.++ ..||||++... ......++|.+|++++++++|||||+++|++.+.+. ..+
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~ 105 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPL 105 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC---CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT-EEE
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc---cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC-ceE
Confidence 4568999999999999997543 25788887422 233445789999999999999999999999876432 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+|||||++|+|.+++..... .+++..+++++.|+++||.|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 106 lv~E~~~~g~l~~~~~~~~~-~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~ 181 (311)
T d1r0pa_ 106 VVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181 (311)
T ss_dssp EEEECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTT
T ss_pred EEEEEeecCchhhhhccccc-cchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhcc
Confidence 99999999999999875443 588999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCC--CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKN--PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
...... ......++..|+|||.+.+..++.++||||||+++|||+||..||...... .++.......
T Consensus 182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-~~~~~~i~~g---------- 250 (311)
T d1r0pa_ 182 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQG---------- 250 (311)
T ss_dssp TTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTT----------
T ss_pred ccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-HHHHHHHHcC----------
Confidence 332221 122233466799999999999999999999999999999988887543211 1111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
.....+...++++.+|+.+||+.||++||||.||++.|+++......
T Consensus 251 ~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~ 297 (311)
T d1r0pa_ 251 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 297 (311)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred CCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence 11112233456788999999999999999999999999999865443
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.4e-49 Score=398.18 Aligned_cols=250 Identities=17% Similarity=0.191 Sum_probs=187.4
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+++.+.||+|+||+||+|++. +++.||||.+...... ...+.+.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lv 85 (307)
T d1a06a_ 11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE---GKEGSMENEIAVLHKIKHPNIVALDDIYESGG--HLYLI 85 (307)
T ss_dssp EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-------------CHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEE
Confidence 445689999999999999986 5788999998654322 12356889999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec---CCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~ 515 (658)
||||++|+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+|||+. +++.+||+|||+|+..
T Consensus 86 mE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 86 MQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp ECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred EeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 99999999999997654 599999999999999999999999 999999999999995 5789999999999865
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... .....+++.|+|||++.+..|+.++|||||||++|||+||+.||.+.... ............. ..
T Consensus 161 ~~~~~---~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~i~~~~~~~---~~-- 230 (307)
T d1a06a_ 161 DPGSV---LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLFEQILKAEYEF---DS-- 230 (307)
T ss_dssp ---------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHTTCCCC---CT--
T ss_pred cCCCe---eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHhccCCCC---CC--
Confidence 43221 12234567899999999999999999999999999999999999754322 1112222111110 01
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......++++.+|+.+||+.||++|||++|+++.
T Consensus 231 --~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 231 --PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp --TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 1122334668899999999999999999999884
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=399.22 Aligned_cols=254 Identities=18% Similarity=0.265 Sum_probs=192.9
Q ss_pred hhhcccccCCCCeeEEEEEecCC----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+++.+.||+|+||.||+|++... ..||+|++.. .......+.|.+|++++++++|||||+++|++.+ + ..
T Consensus 9 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~---~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~--~~ 82 (273)
T d1mp8a_ 9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N--PV 82 (273)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTT---TTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-S--SC
T ss_pred eEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecc---ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-C--eE
Confidence 33458999999999999997532 3466666532 2233445679999999999999999999999964 3 56
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++..++.++.||++||+|||++ +|+||||||+||++++++.+||+|||+|+.+
T Consensus 83 ~iv~E~~~~g~l~~~~~~~~~-~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158 (273)
T ss_dssp EEEEECCTTEEHHHHHHHTTT-TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEEeccCCcHHhhhhccCC-CCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheec
Confidence 999999999999998765433 689999999999999999999999 9999999999999999999999999999875
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 593 (658)
..... .......+++.|+|||.+.+..++.++|||||||++|||+| |.+||...... ....+..
T Consensus 159 ~~~~~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~------------- 224 (273)
T d1mp8a_ 159 EDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN------------- 224 (273)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-------------
T ss_pred cCCcc-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc-------------
Confidence 43222 22233445678999999999999999999999999999998 89999754432 2221111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
......+...++.+.+|+.+||+.||++|||+.||++.|+.+++
T Consensus 225 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 225 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11112334455778999999999999999999999999998764
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-49 Score=404.32 Aligned_cols=253 Identities=18% Similarity=0.216 Sum_probs=199.1
Q ss_pred hcccccCCCCeeEEEEEecC-CC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.++||+|+||+||+|++.. |+ .||+|++.... .....++|.+|++++++++|||||+++|+|.+.+ .+
T Consensus 13 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---~~ 86 (317)
T d1xkka_ 13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQ 86 (317)
T ss_dssp EEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS---EE
T ss_pred EeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---ee
Confidence 34899999999999999753 33 47777764322 2234568999999999999999999999998753 58
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
++|||+.+|+|.+++..... .+++..+++|+.|||+||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 87 ~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 162 (317)
T d1xkka_ 87 LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 162 (317)
T ss_dssp EEEECCTTCBHHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred EEEEeccCCccccccccccc-CCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecc
Confidence 89999999999998876543 699999999999999999999999 99999999999999999999999999999875
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 594 (658)
............++..|+|||.+.++.++.++|||||||++|||+| |+.||...... +...+....
T Consensus 163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~------------ 230 (317)
T d1xkka_ 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------------ 230 (317)
T ss_dssp TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC------------
T ss_pred cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC------------
Confidence 4433333333445678999999999999999999999999999999 78898754432 222222111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
....+..++..+.+|+.+||+.||++|||+.||++.|+.+..
T Consensus 231 -~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 231 -RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 112233445678899999999999999999999999987653
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-48 Score=392.39 Aligned_cols=253 Identities=18% Similarity=0.208 Sum_probs=201.1
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc--cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+++.+.||+|+||+||+|++. +|+.||||.+...... ......+.+.+|+++|++++|||||++++++.+.+ ..+
T Consensus 12 Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ 89 (293)
T d1jksa_ 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVI 89 (293)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred EEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 344589999999999999985 6789999998654322 22234568999999999999999999999999887 889
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccch
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSW 512 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla 512 (658)
+|||||++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+|
T Consensus 90 iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a 164 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164 (293)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhh
Confidence 9999999999999997654 499999999999999999999999 999999999999998776 4899999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
+....... .....++..|+|||++.+..++.++|||||||++|||+||+.||.+.... +................
T Consensus 165 ~~~~~~~~---~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~i~~~~~~~~~~~ 239 (293)
T d1jksa_ 165 HKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANVSAVNYEFEDEY 239 (293)
T ss_dssp EECTTSCB---CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHTTCCCCCHHH
T ss_pred hhcCCCcc---ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH--HHHHHHHhcCCCCCchh
Confidence 87543221 12233466799999999999999999999999999999999999754322 22222211111111000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+|+.+||+.||++|||++|+++.
T Consensus 240 -------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 240 -------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp -------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -------cCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11234568899999999999999999999863
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-48 Score=396.72 Aligned_cols=243 Identities=18% Similarity=0.190 Sum_probs=195.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|++. +++.||||++...... .....+.+.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 20 l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv~E~ 96 (309)
T d1u5ra_ 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEY 96 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSC-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhcc-CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECC--EEEEEEEe
Confidence 488999999999999975 5778999988644322 2334567999999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|..++..+. .+++.++..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 97 ~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~--- 168 (309)
T d1u5ra_ 97 CLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (309)
T ss_dssp CSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred cCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCCC---
Confidence 99999987765443 599999999999999999999999 9999999999999999999999999999764322
Q ss_pred CCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
....+++.|||||++.+ +.|+.++|||||||++|||++|+.||...... +.......... +..
T Consensus 169 ---~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~--~~~~~i~~~~~-------~~~-- 234 (309)
T d1u5ra_ 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQNES-------PAL-- 234 (309)
T ss_dssp ---CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCC-------CCC--
T ss_pred ---CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCC-------CCC--
Confidence 22345678999999864 46899999999999999999999999654321 11111111100 000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+...++.+.+|+.+||+.||++|||++|+++
T Consensus 235 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 11123466889999999999999999999986
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=4.8e-48 Score=399.32 Aligned_cols=250 Identities=14% Similarity=0.189 Sum_probs=200.2
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..++|
T Consensus 28 Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv 101 (350)
T d1koaa2 28 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMI 101 (350)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT--EEEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc----hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEE
Confidence 345589999999999999985 67899999885432 233567899999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--CCCceeccccchhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~ 516 (658)
||||++|+|.+++..... .+++.++..|+.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+|+.+.
T Consensus 102 mE~~~gg~L~~~l~~~~~-~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 102 YEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp ECCCCSCBHHHHHTCTTS-CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred EEcCCCCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence 999999999999964433 599999999999999999999999 9999999999999964 5789999999998653
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. .......++..|||||++.+..++.++||||+||++|||+||+.||.+... .+.............. .
T Consensus 178 ~~---~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~~~~~---~-- 247 (350)
T d1koaa2 178 PK---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKSCDWNMDD---S-- 247 (350)
T ss_dssp TT---SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCSCC---G--
T ss_pred cc---cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCCCCc---c--
Confidence 22 222234457789999999999999999999999999999999999975432 2222222211111110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....++.+.+|+.+||+.||++|||++|+++.
T Consensus 248 --~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 248 --AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp --GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred --cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111234568899999999999999999999885
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-49 Score=398.85 Aligned_cols=260 Identities=19% Similarity=0.241 Sum_probs=195.5
Q ss_pred hhhcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
+.+.+.||+|+||.||+|++.. ++.||||++.... .....+.+.+|..++.++ +|+|||.+++++.+.+.
T Consensus 15 y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp EEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred EEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 3445899999999999999642 3578999875322 223456788898888888 78999999999876543
Q ss_pred CceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
..++|||||++|+|.++++... ...+++.+++.++.||++||+|||++ +|+||||||+|||+
T Consensus 92 -~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl 167 (299)
T d1ywna1 92 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 167 (299)
T ss_dssp -CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred -eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeE
Confidence 5799999999999999997432 23589999999999999999999999 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCC-CCCCCCCCcHHHH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGR-PPCCKDKGNLVDW 577 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~-~p~~~~~~~~~~~ 577 (658)
++++.+||+|||+|+...............+++.|+|||.+.+..++.++|||||||++|||+||. +||....... ..
T Consensus 168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~-~~ 246 (299)
T d1ywna1 168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF 246 (299)
T ss_dssp CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HH
T ss_pred CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 999999999999998765443333333345667899999999999999999999999999999974 5775443221 11
Q ss_pred HHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
....... . . ...+...++++.+++.+||+.||++|||++||+++|+++++
T Consensus 247 ~~~~~~~-~------~---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 247 CRRLKEG-T------R---MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHT-C------C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcC-C------C---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1111110 0 0 11223344668899999999999999999999999998864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=9.4e-48 Score=397.48 Aligned_cols=250 Identities=13% Similarity=0.171 Sum_probs=200.1
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+ ..|+|
T Consensus 31 Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv 104 (352)
T d1koba_ 31 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLI 104 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEE
Confidence 344589999999999999985 68899999875432 223457889999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec--CCCCceeccccchhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla~~~~ 516 (658)
||||++|+|.+++.... ..+++.++..|+.||+.||+|||++ +|+||||||+|||++ +++.+||+|||+|+.+.
T Consensus 105 mE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 105 LEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180 (352)
T ss_dssp EECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecC
Confidence 99999999999876543 3599999999999999999999999 999999999999998 57899999999998754
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. .......+++.|+|||++.+..++.++||||+||++|||+||+.||.+.... .............. .
T Consensus 181 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~~~~---~--- 249 (352)
T d1koba_ 181 PD---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRCDWEFD---E--- 249 (352)
T ss_dssp TT---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHCCCCCC---S---
T ss_pred CC---CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCC---c---
Confidence 22 1223344567899999999999999999999999999999999999754322 22222211111100 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+.++.+|+.+||+.||++|||+.|+++.
T Consensus 250 -~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 250 -DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp -STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112334668899999999999999999999874
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-48 Score=394.52 Aligned_cols=257 Identities=23% Similarity=0.270 Sum_probs=201.6
Q ss_pred hhcccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 431 (658)
.+.+.||+|+||.||+|+... +..||||++.... ......++.+|...+.++ +|||||+++++|.+++
T Consensus 16 ~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 16 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp EEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred EEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc---ChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 345899999999999998643 2368888874322 233456789999999999 8999999999999877
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
..++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +||||||||+|||
T Consensus 93 --~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiL 167 (299)
T d1fgka_ 93 --PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 167 (299)
T ss_dssp --SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred --eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeeccccee
Confidence 6799999999999999997543 23589999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVD 576 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~ 576 (658)
++.++.+||+|||+++...............+++.|+|||.+.++.|++++|||||||++|||+| |.+||........
T Consensus 168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~- 246 (299)
T d1fgka_ 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL- 246 (299)
T ss_dssp ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH-
Confidence 99999999999999988765544444444455678999999999999999999999999999998 6888865443211
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.. ...... ....+...++.+.+|+.+||+.||++|||+.||++.|+++..
T Consensus 247 -~~-~i~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 247 -FK-LLKEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp -HH-HHHTTC---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HH-HHHcCC---------CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 11 111111 111222344678899999999999999999999999998764
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-48 Score=394.65 Aligned_cols=259 Identities=19% Similarity=0.294 Sum_probs=209.2
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|.+. ++..||||++... ........|.+|++++++++|||||+++|++...+ ..
T Consensus 24 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~---~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~ 98 (308)
T d1p4oa_ 24 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PT 98 (308)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT---SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SC
T ss_pred EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc---cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC--ce
Confidence 3488999999999999874 2568999987422 22334567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 436 MLVFDYASNGTLYEHLHYG--------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
++||||+++|+|.+++... ....+++..+.+++.|+|+||+|||++ +|+||||||+|||+|+++++||+
T Consensus 99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~ 175 (308)
T d1p4oa_ 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 175 (308)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEe
Confidence 9999999999999998632 223579999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCC-CCCCCCCCcHHHHHHHhhcCCc
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGR-PPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
|||+|+.+.............+++.|+|||.+.+..++.++|||||||++|||+||. .||.... ..+......
T Consensus 176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~--~~~~~~~i~---- 249 (308)
T d1p4oa_ 176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--NEQVLRFVM---- 249 (308)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--HHHHHHHHH----
T ss_pred ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH----
Confidence 999998776544433344445678899999999999999999999999999999985 6664332 222222221
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
+......+...+..+.+++.+||+.||++||||.||+++|++.++...
T Consensus 250 ------~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~ 297 (308)
T d1p4oa_ 250 ------EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297 (308)
T ss_dssp ------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred ------hCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 111222333445679999999999999999999999999999877654
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-48 Score=389.51 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=191.7
Q ss_pred hcccccCCCCeeEEEEEecC--C--CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++.. + ..||||++..... ......++|.+|++++++++|||||+++|++.++ ..++
T Consensus 12 ~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~-~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~---~~~l 87 (273)
T d1u46a_ 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---PMKM 87 (273)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEE
T ss_pred EEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec---chhe
Confidence 44889999999999998642 2 3678887754332 2234456899999999999999999999999764 4589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|++.+++..+.. .+++..++.++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 88 v~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 88 VTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEECCTTCBHHHHHHHHGG-GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeeecCcchhhhhhcccC-CCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 9999999999998875433 599999999999999999999999 999999999999999999999999999987643
Q ss_pred cCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
...... .....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +............
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~--~~~~~i~~~~~~~------- 234 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEGERL------- 234 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSCCCC-------
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH--HHHHHHHhCCCCC-------
Confidence 322111 112223567899999999999999999999999999998 89999754322 2222222111110
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
+.+...+..+.+|+.+||+.||++||||.||.+.|+++
T Consensus 235 --~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 235 --PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 12223446788999999999999999999999999874
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-48 Score=396.05 Aligned_cols=254 Identities=20% Similarity=0.319 Sum_probs=199.0
Q ss_pred hcccccCCCCeeEEEEEecCC-C--eEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG-P--EIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~-~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||+||+|+++++ . .||||++..... ....+.|.+|+++|+++ +|||||+++|++.+.+ ..++
T Consensus 14 ~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~i 88 (309)
T d1fvra_ 14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYL 88 (309)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC---hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC--eeEE
Confidence 458999999999999998754 3 356666532221 22345799999999999 7999999999999887 7899
Q ss_pred EEEecCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 438 VFDYASNGTLYEHLHYG--------------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
||||+++|+|.++++.. ....+++..+.+++.|||+||.|||++ +|+||||||+|||++.++.
T Consensus 89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~ 165 (309)
T d1fvra_ 89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 165 (309)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCc
Confidence 99999999999999754 234699999999999999999999999 9999999999999999999
Q ss_pred ceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCC-CCCCCCCcHHHHHHHhh
Q 006178 504 PKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRP-PCCKDKGNLVDWAKDYL 582 (658)
Q Consensus 504 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~-p~~~~~~~~~~~~~~~~ 582 (658)
+||+|||+|+....... .....++..|+|||.+.+..++.++|||||||++|||+||.. ||.... ..+......
T Consensus 166 ~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~--~~~~~~~i~ 240 (309)
T d1fvra_ 166 AKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--CAELYEKLP 240 (309)
T ss_dssp EEECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHGG
T ss_pred eEEcccccccccccccc---ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC--HHHHHHHHH
Confidence 99999999976543222 223345677999999999999999999999999999999765 564332 222222211
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.. .....+...++++.+|+.+||+.||++||||.||++.|+++.+.
T Consensus 241 ~~----------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~ 286 (309)
T d1fvra_ 241 QG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 286 (309)
T ss_dssp GT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hc----------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11 11122334557789999999999999999999999999998754
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-47 Score=391.02 Aligned_cols=257 Identities=18% Similarity=0.275 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
..+.+.||+|+||.||+|++. +++.||||++.... .......|.+|+.+++++ +|||||+++|++.+.+
T Consensus 25 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~- 100 (311)
T d1t46a_ 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc---CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC-
Confidence 345689999999999999863 45689999885322 233456799999999999 7999999999999877
Q ss_pred CceEEEEEecCCCChhhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcce
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE----------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NI 496 (658)
..++|||||++|+|.++++... ...+++..+.+++.||++||+|||++ +++||||||+||
T Consensus 101 -~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NI 176 (311)
T d1t46a_ 101 -PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (311)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred -EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccc
Confidence 6799999999999999997532 23589999999999999999999999 999999999999
Q ss_pred eecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc--
Q 006178 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-- 573 (658)
Q Consensus 497 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-- 573 (658)
+++.++.+|++|||+++...............+++.|+|||.+.++.++.++|||||||++|||+| |.+||......
T Consensus 177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~ 256 (311)
T d1t46a_ 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (311)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999987654333333333445678999999999999999999999999999999 55555443322
Q ss_pred HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+...+..... ...+...+..+.+|+.+||+.||++||||.||+++|++++.
T Consensus 257 ~~~~i~~~~~-------------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 257 FYKMIKEGFR-------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHHHHHHTCC-------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC-------------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 1222221111 01122334678899999999999999999999999998654
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=8.6e-47 Score=379.25 Aligned_cols=262 Identities=17% Similarity=0.219 Sum_probs=200.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--CceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~~~l 437 (658)
.+.+.||+|+||+||+|++. +++.||+|.+.... ..+....+.|.+|++++++++|||||++++++...+. ...|+
T Consensus 10 ~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~l 88 (277)
T d1o6ya_ 10 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 88 (277)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-TTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhh-ccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEE
Confidence 34589999999999999975 67899999885432 2233445679999999999999999999999876542 24789
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++...+ .+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++..+|+|||.++....
T Consensus 89 vmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 89 VMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhcc
Confidence 999999999999987554 499999999999999999999999 999999999999999999999999998875432
Q ss_pred cCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 518 RSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 518 ~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.... .......+++.|+|||++.+..+++++|||||||++|||+||+.||..... .+.................
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~--- 238 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--VSVAYQHVREDPIPPSARH--- 238 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHCCCCCGGGTS---
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH--HHHHHHHHhcCCCCCchhc---
Confidence 2221 122233456789999999999999999999999999999999999975432 2222222222111111111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRP-SMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~~~~ 637 (658)
...++++.+++.+||+.||++|| |++++.+.|.++.+
T Consensus 239 ----~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 239 ----EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp ----SSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred ----cCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence 12336688999999999999999 89999999988753
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-47 Score=388.19 Aligned_cols=248 Identities=18% Similarity=0.144 Sum_probs=201.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
++.+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|+.+|++++|||||++++++.+.+ ..|+||
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~iv~ 84 (337)
T d1o6la_ 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVM 84 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhcc-CHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc--ccccce
Confidence 34589999999999999985 6889999988643321 1223467889999999999999999999999988 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||++|+|.+++...+ .+++..++.++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 85 ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence 9999999999998654 489999999999999999999999 99999999999999999999999999998654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....+++.|+|||++.+..|+.++||||+||++|||+||+.||..... .+.......... .+
T Consensus 160 ~~--~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~--~~~~~~i~~~~~-----------~~ 224 (337)
T d1o6la_ 160 AT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILMEEI-----------RF 224 (337)
T ss_dssp CC--BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CC
T ss_pred cc--cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH--HHHHHHHhcCCC-----------CC
Confidence 21 2223456789999999999999999999999999999999999976542 222222221111 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
+...+.++.+|+.+||+.||++||+ ++|++++
T Consensus 225 p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence 2334466889999999999999995 7888763
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6e-47 Score=393.58 Aligned_cols=246 Identities=15% Similarity=0.120 Sum_probs=193.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHH---HHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQ---REVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~---~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++. +|+.||+|++...... .......+. +|+++++.++|||||++++++.+.+ ..|+
T Consensus 8 i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~--~~~i 84 (364)
T d1omwa3 8 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSF 84 (364)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEE
T ss_pred eeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcc-hhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC--EEEE
Confidence 4589999999999999986 5889999988543311 111122333 4567777889999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|||||++|+|.+++..+. .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 85 vmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 85 ILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999997654 489999999999999999999999 999999999999999999999999999986542
Q ss_pred cCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
. ......+++.|+|||++.. ..|+.++|||||||++|||+||+.||...... .....+.....+.
T Consensus 160 ~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~--------- 226 (364)
T d1omwa3 160 K----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV--------- 226 (364)
T ss_dssp S----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCC---------
T ss_pred C----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC---------
Confidence 2 1223346788999999875 56899999999999999999999999765432 2222222111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPS-----MQELCT 630 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~ 630 (658)
..+...++++.+|+.+||+.||++||| ++|+++
T Consensus 227 --~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 227 --ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp --CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred --CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 112233466889999999999999999 688875
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.7e-46 Score=375.37 Aligned_cols=251 Identities=20% Similarity=0.193 Sum_probs=198.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc-----chhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW-----TGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.||+|+||+||+|++. +++.+|||++....... .....+.+.+|+.++++++ |||||++++++.+.+ .
T Consensus 7 ~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~ 84 (277)
T d1phka_ 7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--F 84 (277)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--E
T ss_pred EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc--c
Confidence 3489999999999999985 67899999986543221 1223456889999999996 999999999999887 8
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.|+|||||++|||.++++.++ .+++.+++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 85 ~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 159 (277)
T d1phka_ 85 FFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 159 (277)
T ss_dssp EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeE
Confidence 899999999999999997544 599999999999999999999999 999999999999999999999999999987
Q ss_pred hhhcCCCCCCcccccCccccCCccccc------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEA------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
+.... ......++..|+|||.+.+ ..++.++||||+||++|||+||+.||........ ...........
T Consensus 160 ~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~--~~~i~~~~~~~ 234 (277)
T d1phka_ 160 LDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM--LRMIMSGNYQF 234 (277)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHTCCCC
T ss_pred ccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH--HHHHHhCCCCC
Confidence 64321 1222345677999999863 4578899999999999999999999976543221 11111111110
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+ .....++++.+|+.+||+.||++|||++||++.
T Consensus 235 ---~~~----~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 235 ---GSP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp ---CTT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ---CCc----ccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 011 112344678899999999999999999998753
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1e-46 Score=384.35 Aligned_cols=244 Identities=15% Similarity=0.178 Sum_probs=199.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+|+++ +|+.||||++..... ......+.+.+|+.++++++|||||++++++.+.+ ..|+|||
T Consensus 8 i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmE 84 (316)
T d1fota_ 8 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMD 84 (316)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHc-cCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC--eeeeEee
Confidence 4589999999999999985 588999998854321 12233567899999999999999999999999887 8899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
||++|+|..++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 85 ~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~- 158 (316)
T d1fota_ 85 YIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT- 158 (316)
T ss_dssp CCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB-
T ss_pred ecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEecccc-
Confidence 999999999988655 489999999999999999999999 99999999999999999999999999998754322
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
....+++.|+|||++.+..|+.++||||+||++|||+||+.||..... .+.......... .++
T Consensus 159 ----~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i~~~~~-----------~~p 221 (316)
T d1fota_ 159 ----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKILNAEL-----------RFP 221 (316)
T ss_dssp ----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHCCC-----------CCC
T ss_pred ----ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH--HHHHHHHHcCCC-----------CCC
Confidence 223456779999999999999999999999999999999999975432 222222222111 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
...++++.+++.+||+.||.+|| |++|++++
T Consensus 222 ~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 222 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 23345688999999999999996 89999863
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-46 Score=385.17 Aligned_cols=248 Identities=11% Similarity=0.152 Sum_probs=197.0
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||+||+|++. +++.||||.+..+. .....+.+|+++|++++|||||++++++.+.+ ..|+||
T Consensus 8 ~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~lvm 80 (321)
T d1tkia_ 8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIF 80 (321)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEE
Confidence 34589999999999999986 57789999885432 22456889999999999999999999999887 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC--CCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla~~~~~ 517 (658)
|||++|+|.+++...+ ..+++.++..|+.||+.||+|||++ +|+||||||+|||++.+ ..+||+|||+++....
T Consensus 81 E~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 81 EFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 9999999999997543 2599999999999999999999999 99999999999999854 5799999999876432
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. .......+++.|+|||...+..++.++||||+||++|||+||+.||...... ..................+
T Consensus 157 ~---~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~--~~~~~i~~~~~~~~~~~~~--- 228 (321)
T d1tkia_ 157 G---DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMNAEYTFDEEAFK--- 228 (321)
T ss_dssp T---CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCCCCCHHHHT---
T ss_pred C---CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCChhhcc---
Confidence 1 1122334567799999999999999999999999999999999999754422 2222222111111110000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.++.+|+.+||+.||++|||+.|++++
T Consensus 229 ----~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 229 ----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 123568899999999999999999999873
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-47 Score=386.28 Aligned_cols=259 Identities=18% Similarity=0.139 Sum_probs=192.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
++||+|+||+||+|++. +|+.||||++...... ......+.+.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~--~~~ivmE~ 81 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 81 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCC--ceeehhhh
Confidence 67999999999999986 5789999988554322 11222356889999999999999999999999887 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.++++..+...+ ..+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+........
T Consensus 82 ~~~~~~~~~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~ 156 (299)
T d1ua2a_ 82 METDLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156 (299)
T ss_dssp CSEEHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred hcchHHhhhhhcc--cCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence 9887777665533 3589999999999999999999999 9999999999999999999999999999875433222
Q ss_pred CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--ccccccc-----
Q 006178 522 NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMSYVV----- 592 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~----- 592 (658)
. ....++..|+|||.+... .|+.++|||||||++|||+||+.||...... ....+......+ .......
T Consensus 157 ~--~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T d1ua2a_ 157 Y--THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY 234 (299)
T ss_dssp C--CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred c--cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchh
Confidence 2 223456779999998754 5899999999999999999999999754321 111111111110 0000000
Q ss_pred --CCcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 --DPELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 --~~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......+ ...++.+.+|+.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 00111111 1234678999999999999999999999874
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-46 Score=386.15 Aligned_cols=244 Identities=15% Similarity=0.177 Sum_probs=192.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecC--CCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES--SPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~--~~~~~~lv~ 439 (658)
+.||+|+||+||+|++. +++.||||++.. .+.+.+|++++.++ +|||||++++++.+. .....|+||
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~---------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivm 88 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 88 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECC---------cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEE
Confidence 56999999999999975 678999998732 13567899987666 899999999998652 112689999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 516 (658)
|||++|+|.+++...+...+++.++..|+.||+.||+|||++ +|+||||||+|||+++ ++.+||+|||+|+...
T Consensus 89 Ey~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~ 165 (335)
T d2ozaa1 89 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165 (335)
T ss_dssp ECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECC
T ss_pred ECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeecc
Confidence 999999999999876555799999999999999999999999 9999999999999985 4579999999998654
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 595 (658)
... ......+++.|+|||++.+..|+.++|||||||++|||+||+.||.+..... ...... .+....
T Consensus 166 ~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~---------~i~~~~ 233 (335)
T d2ozaa1 166 SHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT---------RIRMGQ 233 (335)
T ss_dssp CCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------------CCCSCS
T ss_pred CCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHH---------HHhcCC
Confidence 322 2233446778999999999999999999999999999999999996543221 111110 011111
Q ss_pred C--C-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 L--K-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~--~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. . ......++++.+|+.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 234 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp SSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1 1 0112445779999999999999999999999874
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-47 Score=386.26 Aligned_cols=247 Identities=17% Similarity=0.182 Sum_probs=196.3
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHH-hccCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLA-RINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||+||+|++. +++.||||++...... .....+.+.+|..++. .++|||||++++++.+++ ..|+|
T Consensus 5 ~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~--~~yiv 81 (320)
T d1xjda_ 5 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFV 81 (320)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhcc-ChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC--ceeEE
Confidence 44589999999999999986 5788999988543211 1223345677777765 679999999999999988 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 82 mEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcccc
Confidence 99999999999998654 489999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......+++.|+|||++.+..++.++|||||||++|||+||+.||.+.... +......... + .
T Consensus 157 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~~~~--------~---~ 221 (320)
T d1xjda_ 157 DA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDN--------P---F 221 (320)
T ss_dssp TC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC--------C---C
T ss_pred cc--cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHcCC--------C---C
Confidence 22 222234567899999999999999999999999999999999999754322 2222111111 1 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQ-ELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~-evl~ 630 (658)
++...+.++.+|+.+||+.||++|||+. |+++
T Consensus 222 ~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 222 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 2223346688999999999999999985 6753
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-47 Score=386.19 Aligned_cols=262 Identities=18% Similarity=0.239 Sum_probs=193.9
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--CceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~~~lv~ 439 (658)
+.+.||+|+||.||+|++ +|+.||||++.... ........|+..+.+++|||||++++++.+.+. ...++||
T Consensus 7 l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 347899999999999997 56899999874221 112223345555567899999999999986542 2578999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|||++|+|.+++++. .++|..+.+++.|+|.||+|+|+.. .++|+||||||+|||+++++.+||+|||+++.
T Consensus 81 Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~ 157 (303)
T d1vjya_ 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred ecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccc
Confidence 999999999999864 4899999999999999999999731 23999999999999999999999999999987
Q ss_pred hhhcCCCC--CCcccccCccccCCcccccCC------CCccccchhhHHHHHHHHhCCCCCCCCCCc------------H
Q 006178 515 ILARSEKN--PGTLGSQGAICILPSSLEARH------LDVQGNIYAFGVLLLEIISGRPPCCKDKGN------------L 574 (658)
Q Consensus 515 ~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~------~~~ksDVwS~Gvvl~elltG~~p~~~~~~~------------~ 574 (658)
........ ......++..|+|||++.+.. ++.++|||||||++|||+||..||...... .
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T d1vjya_ 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccch
Confidence 64332211 112234567899999987642 678999999999999999999887432210 1
Q ss_pred HHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
......... ....+|.+.. .+.+.+..+.+|+.+||+.||++|||+.||++.|+++.+
T Consensus 238 ~~~~~~~~~-----~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 297 (303)
T d1vjya_ 238 VEEMRKVVC-----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHHT-----TSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----ccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111111111 1111222211 123456779999999999999999999999999998764
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.5e-46 Score=384.86 Aligned_cols=242 Identities=17% Similarity=0.180 Sum_probs=198.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+++ +|+.||||++..... ......+.+.+|+++|++++|||||++++++.+.. ..++||||
T Consensus 46 ~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~~v~e~ 122 (350)
T d1rdqe_ 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEY 122 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc-cCHHHHHHHHHHHHHHHHcCCCcEeeccccccccc--cccccccc
Confidence 489999999999999986 688999998854321 12233457899999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.+|+|.+++...+ .+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 123 ~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~-- 195 (350)
T d1rdqe_ 123 VAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-- 195 (350)
T ss_dssp CTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred ccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeeccccc--
Confidence 99999999997654 499999999999999999999999 99999999999999999999999999998764221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
....+++.|||||++.+..++.++|||||||++|||+||+.||..... ............ ..+.
T Consensus 196 ---~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i~~~~~-----------~~p~ 259 (350)
T d1rdqe_ 196 ---WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSGKV-----------RFPS 259 (350)
T ss_dssp ---CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CCCT
T ss_pred ---ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH--HHHHHHHhcCCC-----------CCCc
Confidence 223456779999999999999999999999999999999999975432 222222221111 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRP-----SMQELCT 630 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RP-----s~~evl~ 630 (658)
..+.++.+++.+||+.||.+|+ |++|+++
T Consensus 260 ~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred cCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 3346688999999999999994 8999875
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-46 Score=378.91 Aligned_cols=265 Identities=18% Similarity=0.170 Sum_probs=196.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|++. +++.||||++..... .....+++.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 7 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~--~~~iv~e~ 82 (298)
T d1gz8a_ 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEF 82 (298)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred ccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEEecccccccc--ceeEEEee
Confidence 378999999999999985 688999999854322 2233467899999999999999999999999887 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.+ ++.+++.......+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+........
T Consensus 83 ~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~ 158 (298)
T d1gz8a_ 83 LHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158 (298)
T ss_dssp CSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred cCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCccc
Confidence 965 555665544445699999999999999999999999 9999999999999999999999999999876433222
Q ss_pred CCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCcHH--HHHHHhhcCCccc-cccc-C---
Q 006178 522 NPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV--DWAKDYLELPEVM-SYVV-D--- 593 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~-~~~~-~--- 593 (658)
.....++..|+|||.+.... ++.++||||+||++|||++|+.||........ ..........+.. .... .
T Consensus 159 --~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T d1gz8a_ 159 --YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236 (298)
T ss_dssp --TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred --ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccc
Confidence 22334567899999877665 57899999999999999999999975432211 1111111111100 0000 0
Q ss_pred -CcC---CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhccC
Q 006178 594 -PEL---KHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRID 637 (658)
Q Consensus 594 -~~~---~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 637 (658)
... ... ....+.++.+|+.+||+.||++|||++|+++. ++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred ccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 000 000 11224678899999999999999999999986 555433
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.9e-45 Score=371.45 Aligned_cols=257 Identities=16% Similarity=0.167 Sum_probs=193.6
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
.++||+|+||+||+|++++|+.||||++..... .....+++.+|+.+|++++|||||++++++.+.+ ..+++|||+
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~i~~e~~ 82 (286)
T d1ob3a_ 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHL 82 (286)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred ccEEecCCCcEEEEEEeCCCCEEEEEEEehhhc--ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC--ceeEEEEee
Confidence 378999999999999999999999999854432 2333567999999999999999999999999888 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 522 (658)
.++.+..+....+ .+++..+..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||.|.........
T Consensus 83 ~~~~~~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~- 156 (286)
T d1ob3a_ 83 DQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK- 156 (286)
T ss_dssp SEEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred hhhhHHHHHhhcC--CcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCccc-
Confidence 8776666655443 599999999999999999999999 9999999999999999999999999999876433222
Q ss_pred CCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhcCC--ccccccc-----C
Q 006178 523 PGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLELP--EVMSYVV-----D 593 (658)
Q Consensus 523 ~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~--~~~~~~~-----~ 593 (658)
.....++..|+|||.+.+. .++.++||||+||++|||++|+.||.+...... .-+......+ ....... .
T Consensus 157 -~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T d1ob3a_ 157 -YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (286)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred -cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence 1222345679999998764 579999999999999999999999975432111 1111111100 0000000 0
Q ss_pred CcC--------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 594 PEL--------KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 594 ~~~--------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
... .......+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 0112223467889999999999999999999975
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-46 Score=374.57 Aligned_cols=241 Identities=13% Similarity=0.175 Sum_probs=189.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||+||+|++. +++.||||++....... ......++.+|+.++++++ |||||++++++.+.+ ..
T Consensus 7 ~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~--~~ 84 (273)
T d1xwsa_ 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SF 84 (273)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EE
T ss_pred EEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC--eE
Confidence 34589999999999999985 67899999986433111 1111234678999999996 899999999999887 78
Q ss_pred EEEEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchh
Q 006178 436 MLVFDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWK 513 (658)
Q Consensus 436 ~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~ 513 (658)
++||||+.+ +++.+++..+. .+++.++..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 85 ~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 85 VLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGA 159 (273)
T ss_dssp EEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccce
Confidence 999999975 67888887544 499999999999999999999999 99999999999999854 789999999997
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
..... ......++..|+|||++.+..+ +.++||||+||++|||+||+.||.... .. ......
T Consensus 160 ~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----~i----~~~~~~----- 222 (273)
T d1xwsa_ 160 LLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EI----IRGQVF----- 222 (273)
T ss_dssp ECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HH----HHCCCC-----
T ss_pred ecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----HH----hhcccC-----
Confidence 64322 1122345678999999987775 577999999999999999999996421 11 111000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
++...+.++.+|+.+||+.||++|||++|+++.
T Consensus 223 ------~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 223 ------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp ------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------CCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 111233568899999999999999999999874
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=368.98 Aligned_cols=260 Identities=18% Similarity=0.169 Sum_probs=190.0
Q ss_pred cccccCCCCeeEEEEEec-C-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc---cCCCccceeeEEecC---CCCc
Q 006178 363 SNIIGSSPDSLVYKGTMK-G-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES---SPFT 434 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~---~~~~ 434 (658)
.+.||+|+||+||+|++. + ++.||||++....... .....+.+|+.+++.+ +||||+++++++... ....
T Consensus 12 ~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~ 89 (305)
T d1blxa_ 12 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 89 (305)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred EEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc--hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCce
Confidence 488999999999999974 4 4568999886543221 1123456788877766 799999999998532 1126
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.+++|||+.++++..... .....+++..++.++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++.
T Consensus 90 ~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~~~~ 165 (305)
T d1blxa_ 90 LTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 165 (305)
T ss_dssp EEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence 799999998876654443 3334689999999999999999999999 999999999999999999999999999876
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCcc--c---
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPEV--M--- 588 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~--~--- 588 (658)
..... ......++..|+|||++.+..|+.++||||+||++|||+||+.||....... ...+......+.. .
T Consensus 166 ~~~~~---~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (305)
T d1blxa_ 166 YSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 242 (305)
T ss_dssp CCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred hcccc---cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence 43222 1223345678999999999999999999999999999999999997543211 1111111111000 0
Q ss_pred ---cc-c----cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 ---SY-V----VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ---~~-~----~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. . .......+....++.+.+|+.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 0 0000111222344668899999999999999999999875
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.6e-44 Score=363.08 Aligned_cols=276 Identities=14% Similarity=0.179 Sum_probs=198.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE-ecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC-RESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|++. +++.||||.+...... +++.+|++++++++|+|++..++.+ .+.+ ..++
T Consensus 9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~--~~~i 80 (299)
T d1ckia_ 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD--YNVM 80 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS------CCHHHHHHHHHHSTTSTTCCCEEEEEEETT--EEEE
T ss_pred EEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC------HHHHHHHHHHHHccCCCcccEEEEEEecCC--EEEE
Confidence 344589999999999999975 5788999987543321 2477899999999877766655554 5544 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec---CCCCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~ 514 (658)
||||+ +|++.+.+....+ .+++..+..++.|++.||+|||++ +|+||||||+|||++ .+..+||+|||+|+.
T Consensus 81 vme~~-~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~ 155 (299)
T d1ckia_ 81 VMELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155 (299)
T ss_dssp EEECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred EEEEc-CCchhhhhhhccC-CCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCccee
Confidence 99999 5577776654433 599999999999999999999999 999999999999976 355799999999987
Q ss_pred hhhcCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH-HHHhhcCCccc
Q 006178 515 ILARSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW-AKDYLELPEVM 588 (658)
Q Consensus 515 ~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~ 588 (658)
+....... ......+++.|+|||.+.+..++.++|||||||++|||+||+.||.......... ....... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~ 233 (299)
T d1ckia_ 156 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK--KM 233 (299)
T ss_dssp CBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHH--HH
T ss_pred ccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcc--cC
Confidence 65322211 1122346778999999999999999999999999999999999997543221111 1110000 00
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhhhc
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAELAL 656 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l~~ 656 (658)
...........++++.+++.+||+.||++||++.++.+.|+.+... ..-....+.+|..+..
T Consensus 234 ----~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~--~~~~~~~~~Dw~~~~~ 295 (299)
T d1ckia_ 234 ----STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR--QGFSYDYVFDWNMLKF 295 (299)
T ss_dssp ----HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH--HTCCCSCCCHHHHGGG
T ss_pred ----CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH--cCCCCCCCcCchhhcC
Confidence 0000000112336688999999999999999999999988876431 1112334678887654
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-43 Score=368.14 Aligned_cols=261 Identities=19% Similarity=0.234 Sum_probs=189.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC----CCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES----SPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~~~~~~l 437 (658)
.++||+|+||+||+|++. +|+.||||++...... ..+|+++|++++||||+++++++... +..+.++
T Consensus 25 ~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--------~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--------KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS--------CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred eeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH--------HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 478999999999999986 5889999998543322 34799999999999999999998543 2235789
Q ss_pred EEEecCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-Cceeccccchhhh
Q 006178 438 VFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTI 515 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~ 515 (658)
|||||+++.+..+... .....+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+++.+
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhc
Confidence 9999976543333221 2234699999999999999999999999 999999999999999775 8999999998865
Q ss_pred hhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCC-------
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELP------- 585 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~------- 585 (658)
.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... +....+......
T Consensus 174 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 250 (350)
T d1q5ka_ 174 VRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250 (350)
T ss_dssp CTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence 4322 1222345678999998875 56899999999999999999999999754421 111111000000
Q ss_pred -cccccccCCcC------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhhccC
Q 006178 586 -EVMSYVVDPEL------KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRID 637 (658)
Q Consensus 586 -~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 637 (658)
.......-+.. .......++++.+|+.+||+.||++|||+.|+++. ++++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 00000000000 01112344668899999999999999999999974 555543
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-43 Score=365.80 Aligned_cols=260 Identities=16% Similarity=0.153 Sum_probs=190.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~l 437 (658)
.+.||+|+||+||+|++. +|+.||||++.... ......+.+.+|+++|++++|||||+++++|...+. .+.++
T Consensus 23 i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 100 (346)
T d1cm8a_ 23 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 100 (346)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEchhh--cChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEE
Confidence 478999999999999975 58889999985322 233445678999999999999999999999976542 14699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+ +.+|..+++.. .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+|++|||+|+....
T Consensus 101 v~e~~-~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 101 VMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp EEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecc-cccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceeccCC
Confidence 99999 56888877643 499999999999999999999999 999999999999999999999999999976532
Q ss_pred cCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH--HHHHHhhcCCcc-------
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV--DWAKDYLELPEV------- 587 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~--~~~~~~~~~~~~------- 587 (658)
. .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ .........+..
T Consensus 174 ~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (346)
T d1cm8a_ 174 E-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 248 (346)
T ss_dssp S-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred c-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcc
Confidence 2 223345677999999876 4578999999999999999999999976532111 111100000000
Q ss_pred ---------cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 006178 588 ---------MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRI 636 (658)
Q Consensus 588 ---------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 636 (658)
........+..........+.+|+.+||+.||++|||+.|+++. ++.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 249 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 00000111111122334567899999999999999999999986 65544
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-43 Score=358.99 Aligned_cols=263 Identities=16% Similarity=0.167 Sum_probs=189.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC------CCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~ 434 (658)
..+.||+|+||+||+|++. +|+.||||++...... ....+++.+|+++|++++||||+++++++.... ...
T Consensus 14 i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~ 91 (318)
T d3blha1 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 91 (318)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT--TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------C
T ss_pred EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCce
Confidence 3489999999999999985 6889999987554322 234467889999999999999999999986532 125
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.++||||++++.+....... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~~iv~e~~~~~~~~~~~~~~--~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~~ 166 (318)
T d3blha1 92 IYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 166 (318)
T ss_dssp EEEEEECCCEEHHHHHTCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEeccCCCccchhhhcc--cccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceeee
Confidence 79999999877666554433 3589999999999999999999999 999999999999999999999999999976
Q ss_pred hhhcCCC--CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhc-CCc-cc
Q 006178 515 ILARSEK--NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLE-LPE-VM 588 (658)
Q Consensus 515 ~~~~~~~--~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~-~~~-~~ 588 (658)
+...... .......++..|+|||.+.+. .+++++||||+||++|||+||+.||........ ........ ... ..
T Consensus 167 ~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 246 (318)
T d3blha1 167 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 246 (318)
T ss_dssp CCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred cccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 5432211 111223456779999998765 689999999999999999999999975432111 11111111 110 00
Q ss_pred ccccCC---------cCCCCCH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 SYVVDP---------ELKHFSY-------DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ~~~~~~---------~~~~~~~-------~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... ....... .....+.+|+.+||+.||++|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 000000 0000111 113457799999999999999999999865
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-43 Score=363.04 Aligned_cols=260 Identities=17% Similarity=0.133 Sum_probs=189.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC--ceEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--TRMLVF 439 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--~~~lv~ 439 (658)
.+.||+|+||+||+|++. +|+.||||++.... .....+.+.+|+++|++++||||+++++++...... ..++++
T Consensus 13 ~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~ 89 (345)
T d1pmea_ 13 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV 89 (345)
T ss_dssp EEECC---CCCEEEEEETTTCSEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEeeccCeEEEEEEECCCCcEEEEEEEehhc---ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE
Confidence 389999999999999975 78899999985322 233456789999999999999999999999764311 224555
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
+|+.+|+|.+++..+ .+++..++.++.|++.||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 90 ~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~ 163 (345)
T d1pmea_ 90 THLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163 (345)
T ss_dssp EECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence 667799999999754 489999999999999999999999 99999999999999999999999999998654432
Q ss_pred CCC-CCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH-HhhcCCcccc-------
Q 006178 520 EKN-PGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK-DYLELPEVMS------- 589 (658)
Q Consensus 520 ~~~-~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~------- 589 (658)
... ......++..|+|||.+.. ..++.++||||+||++|||+||+.||.........+.. .....+....
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T d1pmea_ 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243 (345)
T ss_dssp CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence 222 2233345677999999854 56789999999999999999999999754422111111 1111100000
Q ss_pred ---c--ccCCcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 ---Y--VVDPELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ---~--~~~~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ...+.....+ .....++.+|+.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0000111111 1123568899999999999999999999975
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-43 Score=353.60 Aligned_cols=258 Identities=13% Similarity=0.102 Sum_probs=196.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|++. +++.||||++.... ......+++.+|+.++++++||||+++++++.+.. ..++|+|+
T Consensus 7 i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~--~~~iv~~~ 82 (292)
T d1unla_ 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEF 82 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSC--SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eeEEecCcCeEEEEEEECCCCcEEEEEEEehhh--CChHHHHHHHHHHHHHHhcCcCCEEeecccccccc--ceeEEeee
Confidence 378999999999999985 67889999985433 22345578999999999999999999999999888 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+.+++|..++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.|+.......
T Consensus 83 ~~~~~l~~~~~~~~--~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~- 156 (292)
T d1unla_ 83 CDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CSEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS-
T ss_pred cccccccccccccc--ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCc-
Confidence 99999988877554 489999999999999999999999 999999999999999999999999999987543222
Q ss_pred CCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcCC-c-ccc---cc--
Q 006178 522 NPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLELP-E-VMS---YV-- 591 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~~-~-~~~---~~-- 591 (658)
.......+..|+|||.+.... ++.++||||+||++|||++|+.||.......... +......+ . ... ..
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (292)
T d1unla_ 157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred -cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccc
Confidence 122223455677888887655 6899999999999999999999975443322111 11111110 0 000 00
Q ss_pred --------cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 --------VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 --------~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...............+.+|+.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0001111223345678899999999999999999999763
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.8e-43 Score=357.48 Aligned_cols=272 Identities=13% Similarity=0.122 Sum_probs=204.8
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||+||+|++. +++.||||.+..... ...+.+|+++++.+.| +|++.+++++.+.. ..++|
T Consensus 8 ~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~~v 79 (293)
T d1csna_ 8 KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLV 79 (293)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC------cHHHHHHHHHHHHhcCCCCCCEEEEEeecCC--ccEEE
Confidence 34589999999999999976 578899997643322 1246789999999964 89999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-----CCCceeccccchh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKLVDFDSWK 513 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla~ 513 (658)
|||+ +|+|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+|+
T Consensus 80 me~~-~~~l~~~~~~~~~-~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~ 154 (293)
T d1csna_ 80 IDLL-GPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 154 (293)
T ss_dssp EECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEec-CCCHHHHHHhhcc-chhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeE
Confidence 9999 6899999875443 599999999999999999999999 9999999999999974 5679999999998
Q ss_pred hhhhcCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCcc
Q 006178 514 TILARSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPEV 587 (658)
Q Consensus 514 ~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~ 587 (658)
.+....... ......+++.|||||.+.+..++.++|||||||++|||+||+.||...... ..............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (293)
T d1csna_ 155 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 234 (293)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred EcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCC
Confidence 764322111 112234578899999999999999999999999999999999999754432 22111111100000
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhh
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAE 653 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~ 653 (658)
. .........++++.+++..|++.+|++||+++.+.+.|+++.+.... ....+.+|+-
T Consensus 235 ~------~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~--~~~~~~Dw~~ 292 (293)
T d1csna_ 235 T------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT--TEDENFDWNL 292 (293)
T ss_dssp S------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC--CSCSCCGGGC
T ss_pred C------ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCC--CCCCCCCCCc
Confidence 0 00000112235688999999999999999999999999887643221 2345678864
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-43 Score=362.86 Aligned_cols=252 Identities=17% Similarity=0.165 Sum_probs=196.2
Q ss_pred hhhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~ 434 (658)
+++.+.||+|+||+||+|+.. +|+.||||.+............+.+.+|++++++++| |||+++++++.+.. .
T Consensus 26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~--~ 103 (322)
T d1vzoa_ 26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--K 103 (322)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--E
T ss_pred eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC--c
Confidence 445589999999999999863 4788999988654422222334568899999999966 89999999999887 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.+++|||+.+|+|.+++..... +++..+..++.||+.||+|+|++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~--~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eeeeeecccccHHHHHHHhccc--ccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhh
Confidence 8999999999999999976553 78899999999999999999999 999999999999999999999999999986
Q ss_pred hhhcCCCCCCcccccCccccCCcccccC--CCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCccccc
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEAR--HLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 590 (658)
+....... .....+++.|++||.+.+. .++.++|||||||++|||+||+.||..... .............
T Consensus 179 ~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~----- 252 (322)
T d1vzoa_ 179 FVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE----- 252 (322)
T ss_dssp CCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-----
T ss_pred hccccccc-ccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCC-----
Confidence 54332221 1223456789999998764 478899999999999999999999975432 2222222211111
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPS-----MQELCT 630 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~ 630 (658)
...+...+.++.+++.+||++||++||| ++|+++
T Consensus 253 ------~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 253 ------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ------CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 0122334567889999999999999994 788875
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.9e-42 Score=356.60 Aligned_cols=251 Identities=14% Similarity=0.136 Sum_probs=190.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.++||+|+||+||+|++. +++.||+|++... ..+++.+|+++|++++ ||||+++++++........++||
T Consensus 39 i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~ 111 (328)
T d3bqca1 39 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 111 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred EEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence 4489999999999999985 6788999987422 1356889999999995 99999999999865544689999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-Cceeccccchhhhhhc
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILAR 518 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~ 518 (658)
||+++|+|.++.+ .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 112 e~~~~~~L~~~~~-----~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~ 183 (328)
T d3bqca1 112 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183 (328)
T ss_dssp ECCCSCBGGGTTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred eecCCCcHHHHhc-----CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCC
Confidence 9999999987643 489999999999999999999999 999999999999999655 5899999999865432
Q ss_pred CCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh--h-------------
Q 006178 519 SEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--L------------- 582 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~------------- 582 (658)
. ......++..|+|||.+.+. .++.++||||+||++|||++|+.||.........+.... .
T Consensus 184 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 260 (328)
T d3bqca1 184 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260 (328)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred C---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcc
Confidence 2 12233456779999998765 479999999999999999999999976554322211100 0
Q ss_pred -cCCcccccccCCcC--------C-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 583 -ELPEVMSYVVDPEL--------K-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 583 -~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.............. . ......+.++.+|+.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp CCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000000000000 0 011223467889999999999999999999986
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-42 Score=354.51 Aligned_cols=256 Identities=15% Similarity=0.090 Sum_probs=185.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~~l 437 (658)
.++||+|+||+||+|++. +|+.||||++..... .....+++.+|+.++++++|||||++++++...+ ..+.|+
T Consensus 22 ~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~i 99 (355)
T d2b1pa1 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99 (355)
T ss_dssp EEECSCC--CEEEEEEETTTTEEEEEEEEESTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred EEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc--CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEE
Confidence 379999999999999986 588999999854432 2334457899999999999999999999996542 137899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+.+ ++.+.+.. .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+|++|||+++....
T Consensus 100 v~Ey~~~-~l~~~~~~----~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 100 VMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp EEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeccch-HHHHhhhc----CCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcccc
Confidence 9999966 55555532 489999999999999999999999 999999999999999999999999999876543
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHH-HHHHhhc-------------
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVD-WAKDYLE------------- 583 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~-~~~~~~~------------- 583 (658)
.. ......++..|+|||++.+..+++++||||+||++|||++|+.||......... .+.....
T Consensus 172 ~~---~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 248 (355)
T d2b1pa1 172 SF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_dssp ------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHH
T ss_pred cc---ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhh
Confidence 22 223334567899999999999999999999999999999999999754321110 0000000
Q ss_pred ------CCcc-----ccccc----CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 584 ------LPEV-----MSYVV----DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 584 ------~~~~-----~~~~~----~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.... ..... .+.........+..+.+|+.+||+.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 00000 000011123456788999999999999999999999865
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-41 Score=351.41 Aligned_cols=261 Identities=16% Similarity=0.151 Sum_probs=190.2
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~lv 438 (658)
.+.||+|+||+||+|++. +|+.||||++..... .....+++.+|+++|++++|||||++++++..... ...+++
T Consensus 23 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i 100 (348)
T d2gfsa1 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100 (348)
T ss_dssp EEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEECchhc--ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEE
Confidence 378999999999999975 688999998854322 23344578899999999999999999999864321 134677
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|+|+.+|+|.+++..+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+|++|||++......
T Consensus 101 ~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 101 VTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp EEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred EEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccCcc
Confidence 7888899999999643 499999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHH-HHHHhhcC-Cccccc-----
Q 006178 519 SEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVD-WAKDYLEL-PEVMSY----- 590 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~-~~~~~~~~-~~~~~~----- 590 (658)
. ....++..|+|||...+. .++.++||||+||++|||++|+.||...+..... .+...... ......
T Consensus 175 ~-----~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (348)
T d2gfsa1 175 M-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249 (348)
T ss_dssp G-----SSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCH
T ss_pred c-----ccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccch
Confidence 2 222345679999987765 4689999999999999999999999765422111 11111110 000000
Q ss_pred ----ccC--CcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 006178 591 ----VVD--PELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRI 636 (658)
Q Consensus 591 ----~~~--~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 636 (658)
... ....... ...+..+.+|+.+||+.||++|||+.|++++ +.+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~ 308 (348)
T d2gfsa1 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308 (348)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence 000 0000111 1224568899999999999999999999984 55443
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.7e-37 Score=320.86 Aligned_cols=259 Identities=18% Similarity=0.152 Sum_probs=187.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-----------CCCccceeeEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYC 427 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~ 427 (658)
+.+.++||+|+||+||+|++. +|+.||||++.... ...+.+.+|+.++++++ |+||+++++++
T Consensus 15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~ 89 (362)
T d1q8ya_ 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 89 (362)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence 345589999999999999985 68899999884322 22356788999888875 57899999998
Q ss_pred ecCCCCceEEEEEecCCCCh-hhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCC---
Q 006178 428 RESSPFTRMLVFDYASNGTL-YEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDF--- 502 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL-~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~--- 502 (658)
........+++|+++..+.. ...........+++..+..++.||++||+|||+ . +|+||||||+|||++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~ 166 (362)
T d1q8ya_ 90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPE 166 (362)
T ss_dssp EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTT
T ss_pred eeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCccc
Confidence 76554466778877755443 333333444568999999999999999999998 6 899999999999998655
Q ss_pred ---CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc------
Q 006178 503 ---SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN------ 573 (658)
Q Consensus 503 ---~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~------ 573 (658)
.+|++|||.|...... .....++..|+|||.+....++.++||||+||+++||++|+.||......
T Consensus 167 ~~~~~kl~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~ 241 (362)
T d1q8ya_ 167 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 241 (362)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred ccceeeEeecccccccccc-----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchh
Confidence 3899999998754322 22334566799999999999999999999999999999999999644321
Q ss_pred --HHHHHHHhhcCC-----------------cccccccCC----------cCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006178 574 --LVDWAKDYLELP-----------------EVMSYVVDP----------ELKHFSYDDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 574 --~~~~~~~~~~~~-----------------~~~~~~~~~----------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs 624 (658)
...........+ ......... .........+..+.+|+.+||+.||++|||
T Consensus 242 ~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpt 321 (362)
T d1q8ya_ 242 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 321 (362)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcC
Confidence 111111100000 000000000 011234567788999999999999999999
Q ss_pred HHHHHHH
Q 006178 625 MQELCTM 631 (658)
Q Consensus 625 ~~evl~~ 631 (658)
++|+++.
T Consensus 322 a~e~L~H 328 (362)
T d1q8ya_ 322 AGGLVNH 328 (362)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9999875
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=1.5e-31 Score=272.90 Aligned_cols=223 Identities=29% Similarity=0.471 Sum_probs=182.9
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCC--CccceeecCCC--CCEEEEEecCCCCcc--cCCccccCCCCCc
Q 006178 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPC--HWTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYLQ 97 (658)
Q Consensus 24 ~~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c--~w~gv~C~~~~--~~v~~l~L~~n~l~g--~~~~~~~~l~~L~ 97 (658)
|.++|++||++||+++. +|. .+++|.. +.||| .|.||+|+... .||+.|+|++++++| .+|+++++|++|+
T Consensus 3 c~~~e~~aLl~~k~~~~-~~~-~l~sW~~-~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~ 79 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHHCC-CCC-cCCCCCC-CCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccc
Confidence 67899999999999996 443 6899975 56999 49999998633 389999999999998 5899999999999
Q ss_pred EEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCC
Q 006178 98 ELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (658)
Q Consensus 98 ~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 176 (658)
+|+|++ |+++|.+|.+|++|++|++|||++|++.+..|..+..+.+|+.++++.|.+.+.+|..++++++|+.+++++|
T Consensus 80 ~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n 159 (313)
T d1ogqa_ 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccc
Confidence 999997 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCC--c-c-------------------------------------------ccccccccCCCCccc----
Q 006178 177 RLQGAVPAGSNSG--Y-T-------------------------------------------ANIHGMYASSANLTG---- 206 (658)
Q Consensus 177 ~l~g~~p~~~~~~--~-~-------------------------------------------~~l~~~~l~~n~l~~---- 206 (658)
.++|.+|...... . . ..+..++++.|.+++
T Consensus 160 ~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~ 239 (313)
T d1ogqa_ 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999988632110 0 0 001112233333332
Q ss_pred ccCCCCCcEEEccCCcCcccCcccCCCCC---CCccCCCccCCCCc
Q 006178 207 LCHLSQLKVADFSYNFFVGSIPKCLEYLP---STSFQGNCLQNKDP 249 (658)
Q Consensus 207 ~~~l~~L~~l~ls~N~l~g~ip~~l~~l~---~~~~~~n~~~~~~~ 249 (658)
+..+++|+.|+|++|+|+|.+|..+++++ .+++++|.+.+..|
T Consensus 240 ~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP 285 (313)
T d1ogqa_ 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCC
Confidence 34578899999999999999998876654 46788898876444
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=5.3e-24 Score=199.76 Aligned_cols=169 Identities=12% Similarity=0.091 Sum_probs=120.2
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccc--------------cchhhHHHHHHHHHHHHhccCCCccceeeEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--------------WTGYLELYFQREVADLARINHENTGKLLGYC 427 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~--------------~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 427 (658)
..+.||+|+||.||+|++.+|+.||||.+...... ..........+|...+.++.|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 35789999999999999999999999976422110 0111223456789999999999999988653
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
. .+++|||+++..+.+ ++......++.|+++||+|||++ +|+||||||+|||++++ .++|+
T Consensus 84 --~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~li 144 (191)
T d1zara2 84 --G----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWII 144 (191)
T ss_dssp --T----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEEC
T ss_pred --C----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEE
Confidence 1 279999998765543 33444668999999999999999 99999999999999976 48999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccC----CcccccCCCCccccchhhHHHHH
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEARHLDVQGNIYAFGVLLL 558 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~a----PE~~~~~~~~~ksDVwS~Gvvl~ 558 (658)
|||.|........ . .+..+. .+. ..+.|+.++|+||..--+.
T Consensus 145 DFG~a~~~~~~~~----~----~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~~ 190 (191)
T d1zara2 145 DFPQSVEVGEEGW----R----EILERDVRNIITY-FSRTYRTEKDINSAIDRIL 190 (191)
T ss_dssp CCTTCEETTSTTH----H----HHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHHH
T ss_pred ECCCcccCCCCCc----H----HHHHHHHHHHHHH-HcCCCCCcccHHHHHHHHh
Confidence 9998865421100 0 000000 111 2356888999999765443
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.78 E-value=6.5e-20 Score=185.86 Aligned_cols=174 Identities=31% Similarity=0.559 Sum_probs=148.1
Q ss_pred CCEEEEEecC-CCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~-n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..++.|+|++ |+++|.+|++|++|++|++|+|++|++.+..|..+..+.+|++++++.|.+.+.+|..+++++.|+.++
T Consensus 76 ~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~ 155 (313)
T d1ogqa_ 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceee
Confidence 4788999997 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCChhhhcCCCCC-CEEeCCCCCCcccCCCC-------------------------CCC--------------
Q 006178 149 LQSNGLTGRLPAELGNLISL-EELHLDRNRLQGAVPAG-------------------------SNS-------------- 188 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L-~~L~L~~N~l~g~~p~~-------------------------~~~-------------- 188 (658)
+++|.++|.+|..++.+.++ +.+++++|+++|..|.. ...
T Consensus 156 l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 235 (313)
T d1ogqa_ 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999998888776 78888888887765531 000
Q ss_pred -----CccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccCccc--CCCCCCCccCCCc
Q 006178 189 -----GYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGNC 243 (658)
Q Consensus 189 -----~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~--l~~l~~~~~~~n~ 243 (658)
.....+..+++++|++++ +.++++|++|+|++|+|+|.+|.. +.+|..+++.+|+
T Consensus 236 ~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred cccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCc
Confidence 112356677899998863 677999999999999999999963 4566677888883
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=2.2e-17 Score=162.76 Aligned_cols=173 Identities=28% Similarity=0.268 Sum_probs=144.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|.+++..+..|.++++|++|+|++|+|+. +| .++.+++|++|+|++|+++ .+|..+..+++|+.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l 107 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccccccccc-ccccccccccccccccc
Confidence 468999999999998777889999999999999999985 44 3678999999999999998 56778999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|.+.+..+..+..+.+|+.|++++|.++ .+|..... ....+..+++++|++++ +..+++|++|+|++|+|+
T Consensus 108 ~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~-~l~~~~~~-~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~ 185 (266)
T d1p9ag_ 108 SFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLT-PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (266)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTT-TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cccccceeeccccccccccccccccccccc-eecccccc-ccccchhcccccccccccCccccccccccceeecccCCCc
Confidence 999999888888899999999999999998 44543322 23467778889998875 456899999999999999
Q ss_pred ccCcccCCCC---CCCccCCCccCCCC
Q 006178 225 GSIPKCLEYL---PSTSFQGNCLQNKD 248 (658)
Q Consensus 225 g~ip~~l~~l---~~~~~~~n~~~~~~ 248 (658)
.+|..+..+ ..+.+++|.+...|
T Consensus 186 -~lp~~~~~~~~L~~L~L~~Np~~CdC 211 (266)
T d1p9ag_ 186 -TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (266)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred -ccChhHCCCCCCCEEEecCCCCCCCc
Confidence 899876554 55678999776543
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.71 E-value=3.5e-18 Score=159.67 Aligned_cols=122 Identities=25% Similarity=0.342 Sum_probs=57.8
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccC-CccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFL-APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~-~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
|.|..|.|++. ...++.|+|++|.|++.+ +..|..+++|+.|+|++|++.+..+..|..+++|++|+|++
T Consensus 8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 55666666521 123444455555544432 22344444555555555544444444444444555555555
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCc
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 5544333444444455555555555554444444444445555555444443
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.1e-16 Score=157.22 Aligned_cols=176 Identities=23% Similarity=0.235 Sum_probs=109.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEcc-CCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLG-TNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls-~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..++.|+|++|+|++..+..|.++++|++|++++|++.+..+..+..+..+..++.+ .|.++...|..+.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 357899999999998777789999999999999999987666666666666666543 4444444455566666666666
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
+++|.+.+..+..+..+++|+.+++++|++++ +|..... ....+..+++++|+++. +.++++|+.+++++|++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~-i~~~~f~-~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l 189 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFR-DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTT-TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred cCCcccccccccccchhcccchhhhccccccc-cChhHhc-cccchhhcccccCcccccchhhhccccccchhhhhhccc
Confidence 66666665555555666666666666666653 3322211 11234455555555543 34455666666666666
Q ss_pred cccCcccCCCC---CCCccCCCccCCC
Q 006178 224 VGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 224 ~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
++..|..+..+ ..+++++|.+...
T Consensus 190 ~~i~~~~f~~l~~L~~L~l~~N~i~~~ 216 (284)
T d1ozna_ 190 AHVHPHAFRDLGRLMTLYLFANNLSAL 216 (284)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred cccChhHhhhhhhcccccccccccccc
Confidence 65555555433 3345555555543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=5.5e-16 Score=152.51 Aligned_cols=169 Identities=24% Similarity=0.230 Sum_probs=137.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
...+++.++++|+. +|+.+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .+| .++.+++|+.|+|+
T Consensus 11 ~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECC
T ss_pred CCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-cccccccccccccc
Confidence 34557888999986 677664 68999999999999877788999999999999999998 565 46789999999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----cCCCCCcEEEccCCcCcc
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~~l~~L~~l~ls~N~l~g 225 (658)
+|+++ .+|..+.++++|+.|++++|.+.+..+.. . ....++..++++.|.+..+ ..+++|+.+++++|++++
T Consensus 86 ~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~-~-~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA-L-RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSST-T-TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ccccc-ccccccccccccccccccccccceeeccc-c-ccccccccccccccccceeccccccccccchhcccccccccc
Confidence 99999 46778999999999999999998543332 2 1234667778888887653 467899999999999998
Q ss_pred cCcccCC---CCCCCccCCCccCCC
Q 006178 226 SIPKCLE---YLPSTSFQGNCLQNK 247 (658)
Q Consensus 226 ~ip~~l~---~l~~~~~~~n~~~~~ 247 (658)
..|..+. +|..+++++|.+...
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~~l 187 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLYTI 187 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred cCccccccccccceeecccCCCccc
Confidence 7776655 455678899988754
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.63 E-value=6.7e-16 Score=143.85 Aligned_cols=128 Identities=27% Similarity=0.343 Sum_probs=107.6
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccC-CcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
.++.++++|+. +|..+. +++++|+|++|+|++.+ +..|.++++|+.|+|++|.+.+..+..+..+++|+.|+|++|
T Consensus 12 ~v~Cs~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcCc-cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 68999999985 777653 78999999999998755 566899999999999999999999999999999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
++++..|..|.++++|++|+|++|+|++..|. . +..+++|++|+|++|.+.+
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~-~--------------------f~~l~~L~~l~L~~N~~~~ 140 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPG-S--------------------FEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTT-S--------------------STTCTTCCEEECTTCCBCC
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHH-H--------------------hcCCccccccccccccccc
Confidence 99988888899999999999999999954443 2 3345566666666666654
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.62 E-value=2.3e-15 Score=151.21 Aligned_cols=185 Identities=19% Similarity=0.311 Sum_probs=125.4
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|++|.|++. ...++.|+|++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++|
T Consensus 10 c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred ecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 78999999741 246889999999999876678999999999999999999888899999999999999999
Q ss_pred cCCCCCcccccCCcccceeecccccCCCC--------------------------ChhhhcCCCCCCEEeCCCCCCcccC
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGR--------------------------LPAELGNLISLEELHLDRNRLQGAV 182 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--------------------------~p~~~~~l~~L~~L~L~~N~l~g~~ 182 (658)
+++ .+|..+ ...|+.|+++.|.+.+. .+..+..+++|+.+++++|.++ .+
T Consensus 90 ~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l 165 (305)
T d1xkua_ 90 QLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TI 165 (305)
T ss_dssp CCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SC
T ss_pred ccC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-cc
Confidence 998 566543 23455555555554421 1233455667777777777665 34
Q ss_pred CCCCCCC--------------------ccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccCcccCCCC---
Q 006178 183 PAGSNSG--------------------YTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYL--- 234 (658)
Q Consensus 183 p~~~~~~--------------------~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~l~~l--- 234 (658)
|...... ....+..+++++|.+.+ +.++++|+.|+|++|+|+ .+|..+..+
T Consensus 166 ~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L 244 (305)
T d1xkua_ 166 PQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYI 244 (305)
T ss_dssp CSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSC
T ss_pred CcccCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCC
Confidence 4322110 01123334555555543 345667777777777776 566655544
Q ss_pred CCCccCCCccCCC
Q 006178 235 PSTSFQGNCLQNK 247 (658)
Q Consensus 235 ~~~~~~~n~~~~~ 247 (658)
..+++++|.++..
T Consensus 245 ~~L~Ls~N~i~~i 257 (305)
T d1xkua_ 245 QVVYLHNNNISAI 257 (305)
T ss_dssp CEEECCSSCCCCC
T ss_pred CEEECCCCccCcc
Confidence 3456667766654
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.54 E-value=2.9e-14 Score=133.35 Aligned_cols=154 Identities=27% Similarity=0.367 Sum_probs=116.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++++++.. +.+..+++|++|+|++|++++..| ++++++|++|++++|.+. .+| .+.++++|+.|++
T Consensus 40 ~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCcccccccccccccc-ccc-ccccccccccccc
Confidence 4678899999998753 357889999999999999986443 889999999999999987 455 4889999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|.+.. + ..+..+++|+.|++++|++.. +|.. .....+..+++.+|.++. +.++++|+.|++++|+++.
T Consensus 114 ~~~~~~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~l---~~~~~L~~L~l~~n~l~~l~~l~~l~~L~~L~ls~N~i~~- 186 (199)
T d2omxa2 114 FNNQITD-I-DPLKNLTNLNRLELSSNTISD-ISAL---SGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSD- 186 (199)
T ss_dssp CSSCCCC-C-GGGTTCTTCSEEECCSSCCCC-CGGG---TTCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-
T ss_pred ccccccc-c-cccchhhhhHHhhhhhhhhcc-cccc---cccccccccccccccccCCccccCCCCCCEEECCCCCCCC-
Confidence 9998874 3 358889999999999998873 3321 112456667777776654 5567888888998888874
Q ss_pred CcccCCCCCCC
Q 006178 227 IPKCLEYLPST 237 (658)
Q Consensus 227 ip~~l~~l~~~ 237 (658)
+| .+..++++
T Consensus 187 i~-~l~~L~~L 196 (199)
T d2omxa2 187 IS-VLAKLTNL 196 (199)
T ss_dssp CG-GGGGCTTC
T ss_pred Cc-cccCCCCC
Confidence 44 34444433
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=4.7e-15 Score=147.28 Aligned_cols=156 Identities=21% Similarity=0.242 Sum_probs=130.0
Q ss_pred CEEEEEe-cCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 71 RVLKINI-SGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L-~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+..++. ..+.++...+..|.++++|++|+|++|.+....+..+..+++|+.+++++|+|++..+..|..+++|+.|+|
T Consensus 81 ~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l 160 (284)
T d1ozna_ 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (284)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhccc
Confidence 4555555 456677766778999999999999999998777778888999999999999999766778889999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|++++..|..|.++++|+.|++++|++++..|..... ..++..++++.|.+.+ +..+.+|++|++++|.+.
T Consensus 161 ~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~--l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD--LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT--CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccCcccccchhhhccccccchhhhhhccccccChhHhhh--hhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 999999888888999999999999999999777754322 3467788999998876 457899999999999998
Q ss_pred ccCc
Q 006178 225 GSIP 228 (658)
Q Consensus 225 g~ip 228 (658)
+.-+
T Consensus 239 C~C~ 242 (284)
T d1ozna_ 239 CDCR 242 (284)
T ss_dssp CSGG
T ss_pred CCcc
Confidence 6543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.50 E-value=7.2e-14 Score=131.78 Aligned_cols=153 Identities=24% Similarity=0.335 Sum_probs=116.4
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+++++.++... .+..+++|++|+|++|++++. + .++.+++|++|++++|++++ +| .+..+++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 47 SIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp TCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred CccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-cccccccccccccc
Confidence 5788999999987642 478899999999999999864 3 36889999999999999984 55 58889999999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|.+. .+ ..+..+++|+.+++++|.+++..+. ....++..+++++|.+++ +.++++|+.|++++|+++ .+
T Consensus 121 ~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~~~~~----~~l~~L~~l~l~~n~l~~i~~l~~l~~L~~L~Ls~N~i~-~l 193 (210)
T d1h6ta2 121 HNGIS-DI-NGLVHLPQLESLYLGNNKITDITVL----SRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS-DL 193 (210)
T ss_dssp TSCCC-CC-GGGGGCTTCCEEECCSSCCCCCGGG----GGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-BC
T ss_pred ccccc-cc-ccccccccccccccccccccccccc----cccccccccccccccccccccccCCCCCCEEECCCCCCC-CC
Confidence 99887 34 3688889999999999988743221 112456667777777664 456788899999999887 45
Q ss_pred cccCCCCCCC
Q 006178 228 PKCLEYLPST 237 (658)
Q Consensus 228 p~~l~~l~~~ 237 (658)
| .+..++++
T Consensus 194 ~-~l~~l~~L 202 (210)
T d1h6ta2 194 R-ALAGLKNL 202 (210)
T ss_dssp G-GGTTCTTC
T ss_pred h-hhcCCCCC
Confidence 5 35555443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=5.3e-14 Score=120.26 Aligned_cols=101 Identities=27% Similarity=0.304 Sum_probs=61.3
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.|+|++|+++. ++ .++.+++|++|+|++|.++ .+|..++.+++|++|++++|+|+ .+| .+..+++|+.|++++|+
T Consensus 2 ~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCc
Confidence 36666666653 22 3666666666666666665 35556666666666666666666 344 36666666666666666
Q ss_pred CCCCC-hhhhcCCCCCCEEeCCCCCCc
Q 006178 154 LTGRL-PAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 154 l~g~~-p~~~~~l~~L~~L~L~~N~l~ 179 (658)
++... ...+..+++|++|++++|+++
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 66321 134566666666666666665
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.48 E-value=6.3e-14 Score=119.80 Aligned_cols=106 Identities=26% Similarity=0.281 Sum_probs=86.2
Q ss_pred cEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCC
Q 006178 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (658)
Q Consensus 97 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 176 (658)
+.|+|++|+++ .+| .+..+++|++||+++|+|+ .+|+.++.+++|+.|++++|.+++ +| .++++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 57999999998 455 4899999999999999998 688889999999999999999994 65 5899999999999999
Q ss_pred CCcccCCCCCCCCccccccccccCCCCccccc
Q 006178 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208 (658)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~ 208 (658)
+++. +|.........++..+++++|.++...
T Consensus 76 ~i~~-~~~~~~l~~~~~L~~L~l~~N~i~~~~ 106 (124)
T d1dcea3 76 RLQQ-SAAIQPLVSCPRLVLLNLQGNSLCQEE 106 (124)
T ss_dssp CCCS-SSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred ccCC-CCCchhhcCCCCCCEEECCCCcCCcCc
Confidence 9983 443211222356778899999887543
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=9.7e-14 Score=124.74 Aligned_cols=113 Identities=20% Similarity=0.142 Sum_probs=69.5
Q ss_pred cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCC
Q 006178 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168 (658)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 168 (658)
.+.++..|++|+|++|+|+. +|..+..+++|++||||+|+++ .++ .+..+++|+.|+|++|+++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 35566667777777777663 4555566677777777777766 443 46667777777777777764444445566777
Q ss_pred CEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCc
Q 006178 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 169 ~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~ 224 (658)
++|+|++|+++. ++. +..+..+++|+.|++++|.++
T Consensus 90 ~~L~L~~N~i~~-~~~-------------------l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 90 TELILTNNSLVE-LGD-------------------LDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CEEECCSCCCCC-GGG-------------------GGGGGGCTTCCEEECCSSGGG
T ss_pred ccceeccccccc-ccc-------------------ccccccccccchhhcCCCccc
Confidence 777777776652 111 012445566777777777665
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=1.7e-13 Score=123.14 Aligned_cols=106 Identities=23% Similarity=0.234 Sum_probs=91.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.++..|+|++|+++. ++..+..+++|+.|+|++|.++. ++ .|..+++|++|+|++|+++...+..+..+++|+.|+|
T Consensus 18 ~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 18 VRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp TSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 368899999999987 46667889999999999999985 44 5899999999999999999544444678999999999
Q ss_pred ccccCCCCCh--hhhcCCCCCCEEeCCCCCCc
Q 006178 150 QSNGLTGRLP--AELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 150 s~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~ 179 (658)
++|+++. ++ ..+..+++|++|++++|.++
T Consensus 95 ~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 95 TNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ccccccc-cccccccccccccchhhcCCCccc
Confidence 9999984 54 46889999999999999987
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.38 E-value=9.9e-13 Score=122.68 Aligned_cols=160 Identities=24% Similarity=0.316 Sum_probs=123.4
Q ss_pred EecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCC
Q 006178 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155 (658)
Q Consensus 76 ~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 155 (658)
.++.+.+++.++ ...+.+|++|++++|.+.. ++ .+..+++|++|+|++|++++ +++ ++++++|+.|++++|.+.
T Consensus 24 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~ 97 (199)
T d2omxa2 24 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA 97 (199)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccC-ccc-ccCCcccccccccccccc
Confidence 445555655433 3567899999999999984 43 58889999999999999996 443 899999999999999998
Q ss_pred CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccCc-ccC
Q 006178 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KCL 231 (658)
Q Consensus 156 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ip-~~l 231 (658)
.+| .+.++++|+.|++++|.+....+-. ....+..+++++|.+.. +..+++|+.|++++|++++..| ..+
T Consensus 98 -~~~-~l~~l~~L~~L~l~~~~~~~~~~~~----~l~~L~~L~l~~n~l~~~~~l~~~~~L~~L~l~~n~l~~l~~l~~l 171 (199)
T d2omxa2 98 -DIT-PLANLTNLTGLTLFNNQITDIDPLK----NLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANL 171 (199)
T ss_dssp -CCG-GGTTCTTCSEEECCSSCCCCCGGGT----TCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTC
T ss_pred -ccc-ccccccccccccccccccccccccc----hhhhhHHhhhhhhhhcccccccccccccccccccccccCCccccCC
Confidence 455 4899999999999999987543321 12467778888888764 5677899999999999986432 234
Q ss_pred CCCCCCccCCCccCCC
Q 006178 232 EYLPSTSFQGNCLQNK 247 (658)
Q Consensus 232 ~~l~~~~~~~n~~~~~ 247 (658)
.+|..+++++|.++..
T Consensus 172 ~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 172 TTLERLDISSNKVSDI 187 (199)
T ss_dssp TTCCEEECCSSCCCCC
T ss_pred CCCCEEECCCCCCCCC
Confidence 5667788899977653
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.38 E-value=1.9e-12 Score=129.38 Aligned_cols=169 Identities=19% Similarity=0.255 Sum_probs=124.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCc-------------------------------------
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK------------------------------------- 112 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~------------------------------------- 112 (658)
..++.|++++|.+....|..|..++.|++|+|++|+++. +|.
T Consensus 55 ~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~-l~~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~ 133 (305)
T d1xkua_ 55 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGT 133 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred ccccccccccccccccchhhhhCCCccCEecccCCccCc-Cccchhhhhhhhhccccchhhhhhhhhhcccccccccccc
Confidence 468888999999888777788888899999888887763 221
Q ss_pred -----------ccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCccc
Q 006178 113 -----------ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA 181 (658)
Q Consensus 113 -----------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 181 (658)
.+..+++|+++++++|.++ .+|..+ +++|+.|++++|..++..+..|.+++.+++|++++|.+++.
T Consensus 134 n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~ 210 (305)
T d1xkua_ 134 NPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 210 (305)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred ccccccCCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhcccccccccccccccccc
Confidence 2334556677777777766 455443 56788888888888888888899999999999999999865
Q ss_pred CCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccCcc-cC---------CCCCCCccCCCccC
Q 006178 182 VPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSIPK-CL---------EYLPSTSFQGNCLQ 245 (658)
Q Consensus 182 ~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~ip~-~l---------~~l~~~~~~~n~~~ 245 (658)
.|... . ...++..+++++|.++. +.++++|++|++++|+++ .|+. .+ .++..+.+.+|.++
T Consensus 211 ~~~~~-~-~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 211 DNGSL-A-NTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CTTTG-G-GSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ccccc-c-ccccceeeecccccccccccccccccCCCEEECCCCccC-ccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 55322 2 23567888999998864 567899999999999998 4442 22 23445667787654
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=8.7e-13 Score=127.17 Aligned_cols=122 Identities=14% Similarity=0.213 Sum_probs=82.7
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCC-cccCCCCCCCEEEcc-
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLG- 126 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls- 126 (658)
|....|.|... ...++.|+|++|.++...+..|.++++|++|+|++|.+...+| ..|.++++++.|++.
T Consensus 8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56777778531 1357888888888877555678888888888888888776543 457788888888765
Q ss_pred CCcCCCCCcccccCCcccceeecccccCCCCChh-hhcCCCCCCEEeCCCCCCc
Q 006178 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA-ELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~ 179 (658)
.|++....+..|.++++|+.|++++|.+....+. .+..+..|..+..+++++.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~ 141 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH 141 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCC
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccc
Confidence 4667766667778888888888888887643221 2233444444444555544
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.36 E-value=1.4e-12 Score=134.66 Aligned_cols=143 Identities=24% Similarity=0.391 Sum_probs=60.9
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.|++++|.++.. +.+..+++|+.|++++|.+++..| +..+++|++|++++|++++. + .+..++.++.++++.
T Consensus 221 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~-~-~~~~~~~l~~l~~~~ 294 (384)
T d2omza2 221 LDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-S-PLAGLTALTNLELNE 294 (384)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-G-GGTTCTTCSEEECCS
T ss_pred CCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCC-C-ccccccccccccccc
Confidence 34444444444331 234444444444444444443221 34444444444444444422 1 133444444444444
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
|.+++ + ..+..+++++.|++++|++++..|- ....+++.+++++|.++. +.++++|+.|++++|++++.
T Consensus 295 n~l~~-~-~~~~~~~~l~~L~ls~n~l~~l~~l----~~l~~L~~L~L~~n~l~~l~~l~~l~~L~~L~l~~N~l~~l 366 (384)
T d2omza2 295 NQLED-I-SPISNLKNLTYLTLYFNNISDISPV----SSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDL 366 (384)
T ss_dssp SCCSC-C-GGGGGCTTCSEEECCSSCCSCCGGG----GGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCBC
T ss_pred ccccc-c-cccchhcccCeEECCCCCCCCCccc----ccCCCCCEEECCCCCCCCChhHcCCCCCCEEECCCCcCCCC
Confidence 44442 1 2244445555555555555432210 111234444555544432 33444555555555555543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.36 E-value=8.1e-13 Score=124.41 Aligned_cols=160 Identities=21% Similarity=0.312 Sum_probs=121.3
Q ss_pred EecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCC
Q 006178 76 NISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155 (658)
Q Consensus 76 ~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 155 (658)
+++.+.+++.++. ..|.+|+.|++++|.+.. ++ .+..+++|++|+|++|++++ ++ .++.+++|+.|++++|+++
T Consensus 30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC
T ss_pred HhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc
Confidence 4455555555443 356789999999999985 33 47889999999999999995 44 4789999999999999999
Q ss_pred CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccCc-ccC
Q 006178 156 GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIP-KCL 231 (658)
Q Consensus 156 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ip-~~l 231 (658)
+ +| .+.++++|+.|++++|.+. .++.. .....+..++++.|.++. +..+++|+.+++++|++++..| ..+
T Consensus 104 ~-l~-~l~~l~~L~~L~l~~~~~~-~~~~l---~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~i~~l~~l 177 (210)
T d1h6ta2 104 D-LS-SLKDLKKLKSLSLEHNGIS-DINGL---VHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGL 177 (210)
T ss_dssp C-GG-GGTTCTTCCEEECTTSCCC-CCGGG---GGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGTTC
T ss_pred c-cc-ccccccccccccccccccc-ccccc---cccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 4 65 5899999999999999886 33321 112355667777777664 4568899999999999986433 234
Q ss_pred CCCCCCccCCCccCCC
Q 006178 232 EYLPSTSFQGNCLQNK 247 (658)
Q Consensus 232 ~~l~~~~~~~n~~~~~ 247 (658)
.+|..+++++|++...
T Consensus 178 ~~L~~L~Ls~N~i~~l 193 (210)
T d1h6ta2 178 TKLQNLYLSKNHISDL 193 (210)
T ss_dssp TTCCEEECCSSCCCBC
T ss_pred CCCCEEECCCCCCCCC
Confidence 5666788999977653
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.34 E-value=3.6e-12 Score=121.49 Aligned_cols=165 Identities=23% Similarity=0.329 Sum_probs=119.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|++.+|+++.. +.+..+++|++|+|++|++++..| +..+++|++|++++|.++ .++ .+..+++|+.+++
T Consensus 41 ~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 41 DGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEEC
T ss_pred CCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccccccc
Confidence 3678899999988863 358889999999999999886543 788899999999999887 454 5788899999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcc---cccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT---GLCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~---~~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|...+. ..+...+.+..+.++++.+....+-. ...++..++++.|.+. .+.++++|+.|++++|++++
T Consensus 115 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~~- 187 (227)
T d1h6ua2 115 TSTQITDV--TPLAGLSNLQVLYLDLNQITNISPLA----GLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD- 187 (227)
T ss_dssp TTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGGGG----GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-
T ss_pred cccccccc--chhccccchhhhhchhhhhchhhhhc----cccccccccccccccccchhhcccccceecccCCCccCC-
Confidence 98888753 23666778888888888776443311 1234556666666654 35677888888888888874
Q ss_pred Ccc--cCCCCCCCccCCCccCCC
Q 006178 227 IPK--CLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 227 ip~--~l~~l~~~~~~~n~~~~~ 247 (658)
+|. .+.+|..+.+++|+++..
T Consensus 188 l~~l~~l~~L~~L~Ls~N~lt~i 210 (227)
T d1h6ua2 188 ISPLASLPNLIEVHLKNNQISDV 210 (227)
T ss_dssp CGGGGGCTTCCEEECTTSCCCBC
T ss_pred ChhhcCCCCCCEEECcCCcCCCC
Confidence 442 345666677788866653
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=3.1e-12 Score=113.88 Aligned_cols=99 Identities=24% Similarity=0.197 Sum_probs=82.9
Q ss_pred CCCCcccCCccccCCCCCcEEeccCC-cccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCC
Q 006178 79 GSSLKGFLAPELGLLTYLQELILHGN-NLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGR 157 (658)
Q Consensus 79 ~n~l~g~~~~~~~~l~~L~~L~L~~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 157 (658)
++++.. +|..+..+++|++|+|++| .++...+..|.++++|+.|+|++|+|+...|..|..+++|+.|+|++|+|+ .
T Consensus 17 ~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~ 94 (156)
T d2ifga3 17 RDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-S 94 (156)
T ss_dssp SSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-C
T ss_pred CCCCcc-CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-c
Confidence 444443 5677888999999999866 588777778999999999999999999777888999999999999999999 5
Q ss_pred ChhhhcCCCCCCEEeCCCCCCc
Q 006178 158 LPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 158 ~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
+|.......+|+.|+|++|.+.
T Consensus 95 l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 95 LSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CCSTTTCSCCCCEEECCSSCCC
T ss_pred cChhhhccccccccccCCCccc
Confidence 6665555558999999999884
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.26 E-value=1.5e-11 Score=126.70 Aligned_cols=81 Identities=26% Similarity=0.373 Sum_probs=63.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|++++++++.. +.+..|++|++|+|++|++++. | .+++|++|++|++++|++++ ++ .++.+++|+.|++
T Consensus 44 ~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~~-i~-~l~~l~~L~~L~~ 117 (384)
T d2omza2 44 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTL 117 (384)
T ss_dssp TTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCC-c-cccCCccccccccccccccc-cc-ccccccccccccc
Confidence 4678888888888753 4577888899999999988864 3 38888899999999998885 33 3788888888888
Q ss_pred ccccCCC
Q 006178 150 QSNGLTG 156 (658)
Q Consensus 150 s~N~l~g 156 (658)
++|.+++
T Consensus 118 ~~~~~~~ 124 (384)
T d2omza2 118 FNNQITD 124 (384)
T ss_dssp CSSCCCC
T ss_pred ccccccc
Confidence 8887764
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=2.9e-11 Score=107.44 Aligned_cols=110 Identities=16% Similarity=0.039 Sum_probs=90.4
Q ss_pred CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC-cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCE
Q 006178 92 LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (658)
Q Consensus 92 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (658)
.......++.+++.+. ..|..+..+++|+.|++++| .++..-+..|.++++|+.|+|++|+|+...|..|..+++|++
T Consensus 6 ~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 3344567889999887 57888999999999999766 488555677999999999999999999877888999999999
Q ss_pred EeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCc
Q 006178 171 LHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 171 L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~ 224 (658)
|+|++|+|+ .+|.... . ..+|+.|+|++|.|.
T Consensus 85 L~Ls~N~l~-~l~~~~~--------------------~-~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 85 LNLSFNALE-SLSWKTV--------------------Q-GLSLQELVLSGNPLH 116 (156)
T ss_dssp EECCSSCCS-CCCSTTT--------------------C-SCCCCEEECCSSCCC
T ss_pred eeccCCCCc-ccChhhh--------------------c-cccccccccCCCccc
Confidence 999999998 6665321 1 225889999999885
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.18 E-value=9.9e-11 Score=111.25 Aligned_cols=162 Identities=20% Similarity=0.326 Sum_probs=123.7
Q ss_pred CccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccc
Q 006178 59 HWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEI 138 (658)
Q Consensus 59 ~w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 138 (658)
.+.|+.. ..+++.|+|++|.+++..| +..+++|++|++++|.++. ++ .+..+++|+.++++.|...+. ..+
T Consensus 55 ~l~~l~~---l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~--~~~ 125 (227)
T d1h6ua2 55 TIEGVQY---LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV--TPL 125 (227)
T ss_dssp CCTTGGG---CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC--GGG
T ss_pred cchhHhc---CCCCcEeecCCceeecccc--ccccccccccccccccccc-cc-ccccccccccccccccccccc--chh
Confidence 4555433 4589999999999987543 8999999999999999874 44 588999999999999998753 346
Q ss_pred cCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcE
Q 006178 139 GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKV 215 (658)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~ 215 (658)
...+.++.+.++++.+... ..+.++++|+.|++++|.+++..+-. ...++..+++++|.+++ +.++++|++
T Consensus 126 ~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~~l~----~l~~L~~L~Ls~n~l~~l~~l~~l~~L~~ 199 (227)
T d1h6ua2 126 AGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLTPLA----NLSKLTTLKADDNKISDISPLASLPNLIE 199 (227)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCGGGT----TCTTCCEEECCSSCCCCCGGGGGCTTCCE
T ss_pred ccccchhhhhchhhhhchh--hhhccccccccccccccccccchhhc----ccccceecccCCCccCCChhhcCCCCCCE
Confidence 6778888999988888743 34778889999999999887443311 12467788888888765 567899999
Q ss_pred EEccCCcCcccCcccCCCCCCC
Q 006178 216 ADFSYNFFVGSIPKCLEYLPST 237 (658)
Q Consensus 216 l~ls~N~l~g~ip~~l~~l~~~ 237 (658)
|++++|+++. +|. +++++.+
T Consensus 200 L~Ls~N~lt~-i~~-l~~l~~L 219 (227)
T d1h6ua2 200 VHLKNNQISD-VSP-LANTSNL 219 (227)
T ss_dssp EECTTSCCCB-CGG-GTTCTTC
T ss_pred EECcCCcCCC-Ccc-cccCCCC
Confidence 9999999985 442 4555443
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=1.9e-10 Score=110.42 Aligned_cols=105 Identities=19% Similarity=0.179 Sum_probs=89.0
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc-ccccCCcccceeeccc-
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVKINLQS- 151 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~- 151 (658)
.++.++.+++ .+|+.+. +++++|+|++|+++...+..|.++++|++|+|++|.+...+| ..|.++++++.|++..
T Consensus 12 ~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 12 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp EEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred EEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence 5788888888 5776553 689999999999997666789999999999999999886554 4678899999999864
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCccc
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGA 181 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 181 (658)
|.+....+..|.++++|++|++++|+++..
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~ 118 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNTGIKHL 118 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESCCCCSC
T ss_pred ccccccccccccccccccccccchhhhccc
Confidence 788877788899999999999999999743
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.12 E-value=2.5e-13 Score=126.41 Aligned_cols=118 Identities=22% Similarity=0.280 Sum_probs=90.8
Q ss_pred CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCC
Q 006178 86 LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNL 165 (658)
Q Consensus 86 ~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 165 (658)
++.++..|++|++|+|++|+++. ++ .|..|++|++|+|++|+++ .+|..+..+++|+.|++++|+++. + +.+..+
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHH
T ss_pred hhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccc
Confidence 45678889999999999999884 54 5888899999999999987 677666667789999999999884 4 357888
Q ss_pred CCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 166 ISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 166 ~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
++|+.|+|++|+++. ++. +..+..+++|+.|++++|.++...+
T Consensus 115 ~~L~~L~L~~N~i~~-~~~-------------------~~~l~~l~~L~~L~L~~N~l~~~~~ 157 (198)
T d1m9la_ 115 VNLRVLYMSNNKITN-WGE-------------------IDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHSSEEEESEEECCC-HHH-------------------HHHHTTTTTCSEEEECSSHHHHHHC
T ss_pred ccccccccccchhcc-ccc-------------------cccccCCCccceeecCCCccccCcc
Confidence 899999999998862 111 0135567888999999998765443
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.07 E-value=8.6e-13 Score=122.69 Aligned_cols=110 Identities=22% Similarity=0.235 Sum_probs=93.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|+++. ++ .+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|+++. ++ .+..+++|+.|+
T Consensus 47 L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~ 121 (198)
T d1m9la_ 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEE
T ss_pred ccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-cccccccccccc
Confidence 3578999999999986 44 5899999999999999998 467666667789999999999984 43 588899999999
Q ss_pred cccccCCCCCh--hhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 149 LQSNGLTGRLP--AELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 149 Ls~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
|++|+++. ++ ..+..+++|+.|+|++|.++...+.
T Consensus 122 L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 122 MSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCC-HHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred cccchhcc-ccccccccCCCccceeecCCCccccCccc
Confidence 99999984 44 4689999999999999998865554
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.90 E-value=7.3e-09 Score=104.55 Aligned_cols=134 Identities=22% Similarity=0.231 Sum_probs=100.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|||++++|+. +|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.- .+.|++|+|+
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 57789999999985 6753 578999999999999 678654 57899999999998 55531 2469999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCC---cccccCCCCCcEEEccCCcCc
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN---LTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~---l~~~~~l~~L~~l~ls~N~l~ 224 (658)
+|.++ .+|. ++.+++|+.|++++|.++...+.. ..+..+.+..+. ...+..+..++.+++++|.+.
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~~------~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPDLP------PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCCCC------TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCS
T ss_pred ccccc-cccc-hhhhccceeecccccccccccccc------ccccchhhccccccccccccccccceeccccccccc
Confidence 99998 5774 688999999999999997443321 112222222222 234566788899999998876
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.71 E-value=1.1e-07 Score=95.68 Aligned_cols=158 Identities=25% Similarity=0.293 Sum_probs=105.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|+|+ .+|.. +.+|+.|++++|+++. ++. + .+.|++|||++|.+. .+|. ++.+++|+.|++
T Consensus 58 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~-l--p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l 127 (353)
T d1jl5a_ 58 PHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSD-L--PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDV 127 (353)
T ss_dssp TTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCS-C--CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhh-h--ccccccccccccccc-cccc-hhhhccceeecc
Confidence 47899999999998 46754 4578999999999873 443 1 246999999999998 6774 688999999999
Q ss_pred ccccCCCCCh------------------hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCC---Cccccc
Q 006178 150 QSNGLTGRLP------------------AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA---NLTGLC 208 (658)
Q Consensus 150 s~N~l~g~~p------------------~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n---~l~~~~ 208 (658)
++|.++...+ ..+..++.++.|++++|.+.. ++.... .........+ .+..+.
T Consensus 128 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~-~~~~~~-----~~~~l~~~~~~~~~~~~~~ 201 (353)
T d1jl5a_ 128 DNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK-LPDLPL-----SLESIVAGNNILEELPELQ 201 (353)
T ss_dssp CSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCCCCT-----TCCEEECCSSCCSSCCCCT
T ss_pred ccccccccccccccccchhhccccccccccccccccceecccccccccc-cccccc-----ccccccccccccccccccc
Confidence 9998874321 223445666777777776652 222111 1111122222 233455
Q ss_pred CCCCCcEEEccCCcCcccCcccCCCCCCCccCCCcc
Q 006178 209 HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244 (658)
Q Consensus 209 ~l~~L~~l~ls~N~l~g~ip~~l~~l~~~~~~~n~~ 244 (658)
.++.|+.+++++|... .+|....++....+..|.+
T Consensus 202 ~l~~L~~l~l~~n~~~-~~~~~~~~l~~~~~~~~~~ 236 (353)
T d1jl5a_ 202 NLPFLTTIYADNNLLK-TLPDLPPSLEALNVRDNYL 236 (353)
T ss_dssp TCTTCCEEECCSSCCS-SCCSCCTTCCEEECCSSCC
T ss_pred cccccccccccccccc-ccccccccccccccccccc
Confidence 6788899999988766 4666666666555555543
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=1.8e-09 Score=106.04 Aligned_cols=171 Identities=20% Similarity=0.176 Sum_probs=109.8
Q ss_pred CCEEEEEecCCCCccc-CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC-cCCCC-CcccccCCcccce
Q 006178 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGP-IPPEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~-~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 146 (658)
.+++.|||+++.+++. +...+..+++|++|+|++|.++...+..+..+++|++|+|+++ .++.. +..-..++++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4688999998887654 3445678899999999999988877888888999999999984 55421 1222356889999
Q ss_pred eecccc-cCCC-CChhhhcC-CCCCCEEeCCCC--CCccc-CCCCCCCCccccccccccCCCC-cc-----cccCCCCCc
Q 006178 147 INLQSN-GLTG-RLPAELGN-LISLEELHLDRN--RLQGA-VPAGSNSGYTANIHGMYASSAN-LT-----GLCHLSQLK 214 (658)
Q Consensus 147 L~Ls~N-~l~g-~~p~~~~~-l~~L~~L~L~~N--~l~g~-~p~~~~~~~~~~l~~~~l~~n~-l~-----~~~~l~~L~ 214 (658)
|+|+++ .++. .++..+.. .++|+.|++++. .++.. +.. . ....+++..++++++. ++ .+.++++|+
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~-l-~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~ 203 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST-L-VRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHH-H-HHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccccccccc-c-ccccccccccccccccCCCchhhhhhcccCcCC
Confidence 999885 4442 12233333 468888888864 23321 100 0 0011345566666543 32 356778899
Q ss_pred EEEccC-CcCcccCcccCCCCC---CCccCCC
Q 006178 215 VADFSY-NFFVGSIPKCLEYLP---STSFQGN 242 (658)
Q Consensus 215 ~l~ls~-N~l~g~ip~~l~~l~---~~~~~~n 242 (658)
+|++++ +.++......+.+++ .+++.++
T Consensus 204 ~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 999988 467655555554444 4455553
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=1.1e-08 Score=100.36 Aligned_cols=151 Identities=19% Similarity=0.151 Sum_probs=102.6
Q ss_pred cCCCCCcEEeccCCccccc-CCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc-cCCCC-ChhhhcCCCC
Q 006178 91 GLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN-GLTGR-LPAELGNLIS 167 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~ 167 (658)
.....|++|||+++.++.. ++..+..+++|++|+|+++.+++..+..++.+++|++|+|+++ .++.. +..-+.++++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence 4556899999999988754 4555788999999999999998888888999999999999994 56521 2333467899
Q ss_pred CCEEeCCCC-CCcccCCCCCCCCccccccccccCCC--Cccc------ccCCCCCcEEEccCC-cCcccCcccCCCCC--
Q 006178 168 LEELHLDRN-RLQGAVPAGSNSGYTANIHGMYASSA--NLTG------LCHLSQLKVADFSYN-FFVGSIPKCLEYLP-- 235 (658)
Q Consensus 168 L~~L~L~~N-~l~g~~p~~~~~~~~~~l~~~~l~~n--~l~~------~~~l~~L~~l~ls~N-~l~g~ip~~l~~l~-- 235 (658)
|++|+++++ .++...-..........+..+++++. .++. ..++++|+.|++++| .+++..+..+..++
T Consensus 123 L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L 202 (284)
T d2astb2 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 202 (284)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred ccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcC
Confidence 999999985 44421100000001124555556543 2221 235789999999986 57766666665544
Q ss_pred -CCccCC
Q 006178 236 -STSFQG 241 (658)
Q Consensus 236 -~~~~~~ 241 (658)
.+++++
T Consensus 203 ~~L~L~~ 209 (284)
T d2astb2 203 QHLSLSR 209 (284)
T ss_dssp CEEECTT
T ss_pred CEEECCC
Confidence 445554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.42 E-value=9.7e-09 Score=103.72 Aligned_cols=177 Identities=18% Similarity=0.152 Sum_probs=102.3
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCcEEeccCCcccccCC----c---------ccCCCCCCCEEEccCCcCCC
Q 006178 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGIIP----K---------ELGLLKRLKILDLGTNQLTG 132 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~----~~~~~~~l~~L~~L~L~~N~l~g~~p----~---------~~~~l~~L~~L~Ls~N~l~g 132 (658)
.+++.|+|++|.++.. +...+...++|++|+|++|.+...-. . .....+.|+.|++++|+++.
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc
Confidence 3577788888877653 23344566778888888777642100 0 11245677777777777652
Q ss_pred C----CcccccCCcccceeecccccCCCC-----ChhhhcCCCCCCEEeCCCCCCcccCCCCC--CCCccccccccccCC
Q 006178 133 P----IPPEIGNLTGLVKINLQSNGLTGR-----LPAELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASS 201 (658)
Q Consensus 133 ~----~p~~~~~l~~L~~L~Ls~N~l~g~-----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~~~~~l~~~~l~~ 201 (658)
. +...+..++.|+.|+|++|.++.. +...+..+++|+.|+|++|.++..-.... ......++..+++++
T Consensus 173 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~ 252 (344)
T d2ca6a1 173 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 252 (344)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred cccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence 1 222344567788888888877631 23345667788888888887753210000 000113456677777
Q ss_pred CCccc---------cc--CCCCCcEEEccCCcCccc----Ccc----cCCCCCCCccCCCccCC
Q 006178 202 ANLTG---------LC--HLSQLKVADFSYNFFVGS----IPK----CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 202 n~l~~---------~~--~l~~L~~l~ls~N~l~g~----ip~----~l~~l~~~~~~~n~~~~ 246 (658)
|.++. +. ....|+.||+++|+++.. +.. ....+..+++++|++..
T Consensus 253 n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 253 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 77653 11 235688888888887532 122 23456677777776644
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.37 E-value=1.5e-08 Score=102.19 Aligned_cols=156 Identities=15% Similarity=0.112 Sum_probs=110.5
Q ss_pred CCEEEEEecCCCCcccCCc-------------cccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCC
Q 006178 70 DRVLKINISGSSLKGFLAP-------------ELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG 132 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~-------------~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g 132 (658)
..++.|+|++|.++..-.. .......|+.|++++|++... +...+...+.|+.|+|++|+++.
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 200 (344)
T d2ca6a1 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 200 (344)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred ccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcccccccccccc
Confidence 4688999999987532111 113567899999999988632 33445677899999999999863
Q ss_pred C-----CcccccCCcccceeecccccCCCC----ChhhhcCCCCCCEEeCCCCCCcccCCCCCC----CCcccccccccc
Q 006178 133 P-----IPPEIGNLTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQGAVPAGSN----SGYTANIHGMYA 199 (658)
Q Consensus 133 ~-----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~----~~~~~~l~~~~l 199 (658)
. +...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.+++.-..... ......+..+++
T Consensus 201 ~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~l 280 (344)
T d2ca6a1 201 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 280 (344)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred cccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEEC
Confidence 2 234467788999999999998632 445677899999999999998753111000 001135677899
Q ss_pred CCCCccc---------c-cCCCCCcEEEccCCcCcc
Q 006178 200 SSANLTG---------L-CHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 200 ~~n~l~~---------~-~~l~~L~~l~ls~N~l~g 225 (658)
++|.++. + .++++|+.|++++|.|+.
T Consensus 281 s~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 281 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 9998763 2 257889999999999863
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.28 E-value=2.5e-06 Score=81.74 Aligned_cols=131 Identities=15% Similarity=0.110 Sum_probs=87.4
Q ss_pred CCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEEEecCCCCh
Q 006178 369 SPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDYASNGTL 447 (658)
Q Consensus 369 G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL 447 (658)
++.+.||+... +++.+++|+....... ....+.+|...++.+. +--+.+++++..+++ ..++||+++++.++
T Consensus 25 ~s~~~v~rv~~-~~~~~vlk~~~~~~~~----~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~--~~~lv~~~l~G~~~ 97 (263)
T d1j7la_ 25 MSPAKVYKLVG-ENENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMSEADGVLC 97 (263)
T ss_dssp CSSSEEEEEEC-SSCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECCSSEEH
T ss_pred CCCCcEEEEEe-CCCeEEEEEcCCCccc----chhhHHHHHHHHHHHhccCCCCcEEEEEecCC--ceEEEEEecccccc
Confidence 34468999875 4456777776433221 1224678888888773 444678888877666 67999999999887
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------------
Q 006178 448 YEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL--------------------------------------------- 482 (658)
Q Consensus 448 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--------------------------------------------- 482 (658)
.+..... .....++.++++.++.||+..
T Consensus 98 ~~~~~~~-------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (263)
T d1j7la_ 98 SEEYEDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHHTTTC-------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHH
T ss_pred ccccccc-------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHH
Confidence 6554311 112334556666666666411
Q ss_pred -----------CCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 483 -----------GPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 483 -----------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
.+.++|+|+.|.||++++++..-|+||+.+.
T Consensus 171 ~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 1248999999999999987667799998543
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=7.6e-08 Score=100.48 Aligned_cols=110 Identities=29% Similarity=0.315 Sum_probs=85.8
Q ss_pred CEEEEEecCCCCccc-CCccccCCCCCcEEeccCCcccc----cCCcccCCCCCCCEEEccCCcCCCC----Cccccc-C
Q 006178 71 RVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTGP----IPPEIG-N 140 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~-~~~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~-~ 140 (658)
+|+.||+++|++++. +..-+..+++|+.|+|++|.++- .+...+..+++|+.|||++|.|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 589999999999863 23345678999999999999873 3456678899999999999998521 122222 2
Q ss_pred CcccceeecccccCCCC----ChhhhcCCCCCCEEeCCCCCCcc
Q 006178 141 LTGLVKINLQSNGLTGR----LPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 141 l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
..+|+.|+|++|+++.. ++..+..+++|++|+|++|.++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 35799999999999753 46678889999999999999864
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=2.7e-07 Score=81.70 Aligned_cols=82 Identities=22% Similarity=0.178 Sum_probs=49.6
Q ss_pred ccCCCCCcEEeccCCccccc--CCcccCCCCCCCEEEccCCcCCCCCcc-cccCCcccceeecccccCCCCChh------
Q 006178 90 LGLLTYLQELILHGNNLIGI--IPKELGLLKRLKILDLGTNQLTGPIPP-EIGNLTGLVKINLQSNGLTGRLPA------ 160 (658)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~------ 160 (658)
+..++.|++|+|++|+++.. ++..+..+++|+.|||++|.++ .+++ ......+|+.|+|++|.++.....
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~ 139 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRDQSTYIS 139 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHH
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcCcccchhHHH
Confidence 34567777777777777643 2334556777777777777776 3332 223344577777777777654432
Q ss_pred -hhcCCCCCCEEe
Q 006178 161 -ELGNLISLEELH 172 (658)
Q Consensus 161 -~~~~l~~L~~L~ 172 (658)
.+..+++|+.||
T Consensus 140 ~i~~~~P~L~~LD 152 (162)
T d1koha1 140 AIRERFPKLLRLD 152 (162)
T ss_dssp HHHTTSTTCCEET
T ss_pred HHHHHCCCCCEEC
Confidence 245567777665
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.10 E-value=7e-06 Score=78.11 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=82.6
Q ss_pred cccCCC-CeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSP-DSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~-~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+..|. .+.||+...+++..+++|...... ...+..|+..++.+. .-.+.+++++..+.+ ..++|||+
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~-------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~--~~~~v~~~ 87 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGE 87 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEEC
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC-------HhHHHHHHHHHHHHHhcCCCCCceeeeccccc--ceEEEEEe
Confidence 344444 367999998888878887643221 123677888888774 334677788777766 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-----------------------------------------
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT----------------------------------------- 480 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~----------------------------------------- 480 (658)
+++.++.+.. ... ...+.++++.|+-||+
T Consensus 88 i~G~~~~~~~-------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T d1nd4a_ 88 VPGQDLLSSH-------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 157 (255)
T ss_dssp CSSEETTTSC-------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred eecccccccc-------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhH
Confidence 9886654321 111 1112233333333332
Q ss_pred ----------c----CCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 481 ----------E----LGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 481 ----------~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
. ..+.++|+|+.|.|||++++..+-|+||+.+
T Consensus 158 ~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~ 203 (255)
T d1nd4a_ 158 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL 203 (255)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred HHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhc
Confidence 1 1124899999999999998766789999854
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.09 E-value=6.7e-08 Score=85.78 Aligned_cols=93 Identities=22% Similarity=0.144 Sum_probs=66.4
Q ss_pred ccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCC--CcccccCCcccceeecccccCCCCChhhhcCCCC
Q 006178 90 LGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP--IPPEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167 (658)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 167 (658)
+..+..+..|++.+|.. ..++..+..+++|++|+||+|+++.. ++..+..+++|+.|+|++|.++..-+-.+....+
T Consensus 38 l~~~~~~~~l~~~~~~~-~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~ 116 (162)
T d1koha1 38 LVAQNIDVVLNRRSSMA-ATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLK 116 (162)
T ss_dssp TTTTTCCCCTTSHHHHH-HHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCC
T ss_pred hhhccchhhcchhhhHh-hhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccc
Confidence 44455555555555443 34555556789999999999999843 2345678999999999999999533324445568
Q ss_pred CCEEeCCCCCCcccCC
Q 006178 168 LEELHLDRNRLQGAVP 183 (658)
Q Consensus 168 L~~L~L~~N~l~g~~p 183 (658)
|+.|++++|.++....
T Consensus 117 L~~L~L~~Npl~~~~~ 132 (162)
T d1koha1 117 LEELWLDGNSLSDTFR 132 (162)
T ss_dssp CSSCCCTTSTTSSSSS
T ss_pred cceeecCCCCcCcCcc
Confidence 9999999999975443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=3.8e-07 Score=94.94 Aligned_cols=114 Identities=24% Similarity=0.248 Sum_probs=79.8
Q ss_pred CCcEEeccCCccccc-CCcccCCCCCCCEEEccCCcCCC----CCcccccCCcccceeecccccCCCC----Chhhhc-C
Q 006178 95 YLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR----LPAELG-N 164 (658)
Q Consensus 95 ~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~-~ 164 (658)
+|+.||+++|++++. +..-+..+++|++|+|++|.++. .+...+..+++|+.|||++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 589999999999763 23335567899999999998862 3345567889999999999988621 122222 2
Q ss_pred CCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 165 LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 165 l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
..+|++|+|++|+++..--. .+ ...+..+++|+.|++++|.++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~--------~l---------~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCG--------VL---------SSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHH--------HH---------HHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccc--------cc---------cchhhccccccccccccccchh
Confidence 35799999999988732100 00 0124567889999999998864
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.71 E-value=6.3e-05 Score=76.25 Aligned_cols=79 Identities=11% Similarity=-0.030 Sum_probs=47.8
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeecccc---chhhHHHHHHHHHHHHhc-cC--CCccceeeEEecCCCCceE
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHW---TGYLELYFQREVADLARI-NH--ENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~---~~~~~~~~~~E~~~l~~l-~H--~nIv~l~~~~~~~~~~~~~ 436 (658)
+.||.|....||+....+ ++.++||.-....... -.....+...|.+.|+.+ .+ ..+.+++.+.. + ..+
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~--~--~~~ 107 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--E--MAV 107 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T--TTE
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcC--C--CCE
Confidence 578999999999999765 5677777543211100 011123455788888776 23 45667766543 3 348
Q ss_pred EEEEecCCCC
Q 006178 437 LVFDYASNGT 446 (658)
Q Consensus 437 lv~E~~~~gs 446 (658)
+|||++++..
T Consensus 108 lvmE~L~~~~ 117 (392)
T d2pula1 108 TVMEDLSHLK 117 (392)
T ss_dssp EEECCCTTSE
T ss_pred EEEeccCCcc
Confidence 9999997644
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.33 E-value=3e-05 Score=68.41 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=71.2
Q ss_pred CCEEEEEecCC-CCccc----CCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCCC----Ccc
Q 006178 70 DRVLKINISGS-SLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPP 136 (658)
Q Consensus 70 ~~v~~l~L~~n-~l~g~----~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 136 (658)
..++.|+|+++ .++.. +-..+...+.|++|+|++|.+... +...+...+.|+.|+|++|.++.. +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 46788888864 45421 333466677888899988888632 223344567888999988887632 112
Q ss_pred cccCCcccceeecccccCCCC-------ChhhhcCCCCCCEEeCCCCCC
Q 006178 137 EIGNLTGLVKINLQSNGLTGR-------LPAELGNLISLEELHLDRNRL 178 (658)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~-------~p~~~~~l~~L~~L~L~~N~l 178 (658)
.+...++|+.|+|++|.+... +...+..-++|+.|+++.+..
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 355667788888888876521 233445567888888876643
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.03 E-value=0.00083 Score=65.80 Aligned_cols=68 Identities=9% Similarity=-0.030 Sum_probs=43.1
Q ss_pred eeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCc--cceee-----EEecCCCCceEEEEEecCC
Q 006178 372 SLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT--GKLLG-----YCRESSPFTRMLVFDYASN 444 (658)
Q Consensus 372 g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nI--v~l~~-----~~~~~~~~~~~lv~E~~~~ 444 (658)
-.||+++.++|..+++|....... ..+++..|...+..|....+ +.... .+...+ ..+.++++++|
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~~-----s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~--~~~~l~~~~~G 108 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPERW-----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFAVFPSVGG 108 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTTS-----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEEEEECCCC
T ss_pred ceeEEEEcCCCCEEEEEEeCCCCC-----CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeee--EEEEEEeecCC
Confidence 479999999999999987643221 24567788888888843222 11111 112222 56889999976
Q ss_pred CC
Q 006178 445 GT 446 (658)
Q Consensus 445 gs 446 (658)
..
T Consensus 109 ~~ 110 (325)
T d1zyla1 109 RQ 110 (325)
T ss_dssp EE
T ss_pred cC
Confidence 43
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.99 E-value=0.00016 Score=63.52 Aligned_cols=89 Identities=19% Similarity=0.114 Sum_probs=64.9
Q ss_pred cCCCCCcEEeccCC-ccccc----CCcccCCCCCCCEEEccCCcCCC----CCcccccCCcccceeecccccCCCC----
Q 006178 91 GLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR---- 157 (658)
Q Consensus 91 ~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~---- 157 (658)
.+.+.|++|+|+++ .++.. +-..+...++|+.|+|++|.+.. .+-..+...+.|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45688999999974 45432 23356777899999999998862 2223455678899999999998742
Q ss_pred ChhhhcCCCCCCEEeCCCCCCc
Q 006178 158 LPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 158 ~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
+-..+...++|++|+|++|++.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 2234566788999999999765
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.71 E-value=0.0038 Score=62.73 Aligned_cols=73 Identities=12% Similarity=0.129 Sum_probs=47.3
Q ss_pred ccccCCCCeeEEEEEecCCC-------eEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTMKGGP-------EIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~-------~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~ 435 (658)
+.|+.|-.-.+|++...++. ..++.++...... .....+|..+++.+. +.-..++++++. +
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~-----~idr~~E~~i~~~ls~~gl~Pkll~~~~--~---- 116 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-----ESHLVAESVIFTLLSERHLGPKLYGIFS--G---- 116 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-----HHHHHHHHHHHHHHHHTTSSSCEEEEET--T----
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcch-----hhHHHHHHHHHHHHHhCCCCCeEEEEcC--C----
Confidence 67888999999999876432 2344444332211 123457899998884 544457887763 2
Q ss_pred EEEEEecCCCCh
Q 006178 436 MLVFDYASNGTL 447 (658)
Q Consensus 436 ~lv~E~~~~gsL 447 (658)
.+||||+++..+
T Consensus 117 g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 GRLEEYIPSRPL 128 (395)
T ss_dssp EEEECCCCEEEC
T ss_pred ceEEEEeccccC
Confidence 689999987544
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.39 E-value=0.00026 Score=62.05 Aligned_cols=109 Identities=17% Similarity=0.244 Sum_probs=73.4
Q ss_pred CCEEEEEecC-CCCccc----CCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCCC----Ccc
Q 006178 70 DRVLKINISG-SSLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPP 136 (658)
Q Consensus 70 ~~v~~l~L~~-n~l~g~----~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 136 (658)
..++.|+|++ +.++.. +...+...++|+.|+|++|.++.. +-..+...++|+.|++++|.+... +-.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4678888887 456421 334456788999999999988643 223445678899999999887532 123
Q ss_pred cccCCcccceeec--ccccCCC----CChhhhcCCCCCCEEeCCCCCC
Q 006178 137 EIGNLTGLVKINL--QSNGLTG----RLPAELGNLISLEELHLDRNRL 178 (658)
Q Consensus 137 ~~~~l~~L~~L~L--s~N~l~g----~~p~~~~~l~~L~~L~L~~N~l 178 (658)
.+...++|+.++| +.|.+.. .+...+...++|+.|+++.|..
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 4566778876544 5666643 2444566788999999887754
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.24 E-value=0.0067 Score=58.64 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=25.9
Q ss_pred CCeeeccCCCcceeecCCCCceeccccch
Q 006178 484 PPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 484 ~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
.++||+|+.++||+++++...-|.||+.+
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred cccccCCcchhhhhcccccceeEeccccc
Confidence 38999999999999998877789999865
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.27 E-value=0.0071 Score=52.33 Aligned_cols=117 Identities=21% Similarity=0.172 Sum_probs=73.0
Q ss_pred ccCCCCCcEEeccC-Cccccc----CCcccCCCCCCCEEEccCCcCCCCCc----ccccCCcccceeecccccCCCC---
Q 006178 90 LGLLTYLQELILHG-NNLIGI----IPKELGLLKRLKILDLGTNQLTGPIP----PEIGNLTGLVKINLQSNGLTGR--- 157 (658)
Q Consensus 90 ~~~l~~L~~L~L~~-N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~--- 157 (658)
..+.+.|++|+|++ |.++.. +-..+...++|+.|+|++|.++..-- ..+...++|+.|++++|.++..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 34668899999987 456421 23445678899999999998863211 2345567899999999888632
Q ss_pred -ChhhhcCCCCCCEEeCC--CCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcC
Q 006178 158 -LPAELGNLISLEELHLD--RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFF 223 (658)
Q Consensus 158 -~p~~~~~l~~L~~L~L~--~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l 223 (658)
+-..+...++|+.++|+ .|.+....-. .+ ...+...++|+.|+++.|..
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~--------~L---------a~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEM--------EI---------ANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHH--------HH---------HHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHH--------HH---------HHHHHhCCCcCEEeCcCCCC
Confidence 23456677888876654 4555311000 00 01133457788898877754
|