Citrus Sinensis ID: 006245

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650----
MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
cHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHcccccccccccccccccccHHHcccccccccccHHHHHHHHHccccccEEEcccccccEEEEEEEccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHEccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MEAVLEYFLSFghlacftsDVEDFLLVLSLDKKTELLERLkssstshsteSIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYckslplskdldpqesihgeELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFlelsneigsksvtfnedwqsrpwwtptpdknyllgpfagisycpkenlMKEREANILGVVERKSLLPRLIYLSIQTASACVkenfevngsicdpkvSSELKYLLDRYAKMLGFSLRDAVEVVSGVssglnsseafGADMVGWLNFAVFLNAwnlsshevvlpdvngcrhSTWQVVNTLLKKCILEVrsmeslvcypqldLSVLVQLVTEPLAWHTLVMQScvrsslpsgkkkkrsgsadhstsplshdirgsvqstSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLeangrgegpgQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLErlkssstshstesikelGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNeigsksvtfnedwqsrpwWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFevngsicdpkVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVrsslpsgkkkkrsgsadhstsplshdirgsvqstSGVVEEVAKWLGhhikksedeKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKssstshstesIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAvevvsgvssglnsseAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
***VLEYFLSFGHLACFTSDVEDFLLVLSLDKKTEL***************IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSL**************EELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIE*EESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCV************************************VVEEVAKWLGHHIK*********IF************GQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKI*************
MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLER***************LGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLP*******QESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLM****ANILGVVERKSLLPRLIYLSIQ*********************SSELKYLLDRYAKMLGFSLRDAVEVV************FGADMVGWLNFAVFLNAWNLSSHEVV*****GCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSC**************************DIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEA*****GPGQVFRLLGTLI**********RISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQM***
MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLE*************IKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSC************************************GVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSL**********
MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSS*****************SPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQ****
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MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLxxxxxxxxxxxxxxxxxxxxxxxxxxxxKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query654 2.2.26 [Sep-21-2011]
Q9VDQ7948 Phagocyte signaling-impai yes no 0.415 0.286 0.273 1e-16
Q294E0962 Phagocyte signaling-impai yes no 0.402 0.273 0.250 1e-14
Q6QI44970 N-alpha-acetyltransferase yes no 0.411 0.277 0.227 9e-12
Q14CX7972 N-alpha-acetyltransferase yes no 0.411 0.276 0.231 1e-11
Q8BWZ3972 N-alpha-acetyltransferase yes no 0.411 0.276 0.227 3e-11
Q9Y809811 N-terminal acetyltransfer yes no 0.359 0.289 0.265 3e-09
Q17DK2940 Phagocyte signaling-impai N/A no 0.394 0.274 0.219 2e-07
Q7PYI4990 Phagocyte signaling-impai yes no 0.229 0.151 0.22 0.0003
>sp|Q9VDQ7|NAA25_DROME Phagocyte signaling-impaired protein OS=Drosophila melanogaster GN=psidin PE=2 SV=1 Back     alignment and function desciption
 Score = 88.6 bits (218), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 6/278 (2%)

Query: 2   EAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERL--KSSSTSHSTESIKE-LGWF 58
           E V+EYF  FG  +C T D+  FL  +S++++  L  +L  +S  TS S    KE L   
Sbjct: 341 EMVIEYFRLFGDKSCCTHDIALFLPSISMNQRQALASKLLLESGVTSTSLPKNKEQLQKH 400

Query: 59  ITLKKIQELIGNTYKLLVDELER--SAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMAS 116
           +   +I  + G+   L  D L    +A+++   + ++    K L   E    +    +A+
Sbjct: 401 LCALQISRMCGSHMDLPADHLLAFYTALKLHYEHGRT-TFGKKLLATEMGPSDAYALLAA 459

Query: 117 NVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKAL 176
           NV+  L  R +   +  EA+ +L++ L      +  K+L + +Y   G    A E Y+ L
Sbjct: 460 NVMYDLSRRENKSDHLFEALCLLQYVLRNSTSNFHVKLLSLKIYHLFGCQVGAQEMYEYL 519

Query: 177 DVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSK 236
           D+K I ++++ +     + +   +  + N+    L+F  +  +E  +   L YR   +SK
Sbjct: 520 DIKQIQLDSMGYVHCQLLALGGRFSGNRNVYDATLKFFTNSYKERLEYIALTYRFCTFSK 579

Query: 237 VIEFVQFKERLQRSSQYLVARVESSILQLKQNANNIEE 274
           + EF+ FKERL  S QY+   VE+ I  L     NI +
Sbjct: 580 MEEFMNFKERLTNSLQYVACSVEAQICDLVSCYGNITQ 617
Non-catalytic subunit of the NatB complex which catalyzes acetylation of the N-terminal methionine residues of proteins beginning with Met-Asp or Met-Glu (By similarity). Has 2 roles in the larval immune response: required both for the phagocytic degradation of internalized bacteria and for the induction of Defensin in the fat body. Within the phagocytic blood cells, has a role in detection of infection and activation of the humoral immune response.
Drosophila melanogaster (taxid: 7227)
>sp|Q294E0|NAA25_DROPS Phagocyte signaling-impaired protein OS=Drosophila pseudoobscura pseudoobscura GN=psidin PE=3 SV=3 Back     alignment and function description
>sp|Q6QI44|NAA25_RAT N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Rattus norvegicus GN=Naa25 PE=2 SV=1 Back     alignment and function description
>sp|Q14CX7|NAA25_HUMAN N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Homo sapiens GN=NAA25 PE=1 SV=1 Back     alignment and function description
>sp|Q8BWZ3|NAA25_MOUSE N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus GN=Naa25 PE=1 SV=1 Back     alignment and function description
>sp|Q9Y809|NAA25_SCHPO N-terminal acetyltransferase B complex subunit arm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arm1 PE=3 SV=1 Back     alignment and function description
>sp|Q17DK2|NAA25_AEDAE Phagocyte signaling-impaired protein OS=Aedes aegypti GN=psidin PE=3 SV=2 Back     alignment and function description
>sp|Q7PYI4|NAA25_ANOGA Phagocyte signaling-impaired protein OS=Anopheles gambiae GN=psidin PE=3 SV=5 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query654
224126907 1041 predicted protein [Populus trichocarpa] 1.0 0.628 0.672 0.0
225434443 1009 PREDICTED: N-alpha-acetyltransferase 25, 0.995 0.645 0.665 0.0
297745817 1561 unnamed protein product [Vitis vinifera] 0.958 0.401 0.664 0.0
255550595 1014 TPR repeat-containing protein R13F6.10, 1.0 0.644 0.671 0.0
356565964 1017 PREDICTED: phagocyte signaling-impaired 0.998 0.642 0.628 0.0
356539676 1016 PREDICTED: phagocyte signaling-impaired 0.998 0.642 0.624 0.0
297793381 1018 hypothetical protein ARALYDRAFT_358061 [ 0.978 0.628 0.586 0.0
28392921 1046 unknown protein [Arabidopsis thaliana] 0.977 0.610 0.578 0.0
10177022 1028 unnamed protein product [Arabidopsis tha 0.977 0.621 0.578 0.0
42568628 1065 tetratricopeptide repeat-containing prot 0.977 0.6 0.578 0.0
>gi|224126907|ref|XP_002319956.1| predicted protein [Populus trichocarpa] gi|222858332|gb|EEE95879.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/684 (67%), Positives = 538/684 (78%), Gaps = 30/684 (4%)

Query: 1    MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFIT 60
            +EA++ YFL FGHLA F+SDVE FL VL+ DKKTE L +L  +  S ++   K LG  IT
Sbjct: 358  VEALMLYFLKFGHLASFSSDVEAFLQVLTPDKKTEFLAKLIKTLDSSASAPTKVLGQSIT 417

Query: 61   LKKIQELIGNTYKLLVD-----------------------------ELERSAVQMSEMYC 91
            + KIQEL GN YKL V                              ELE  AVQM EMYC
Sbjct: 418  IFKIQELTGNMYKLPVLGACFFCFFCTHTLAHPTHNLLHIQTAQPLELEGCAVQMVEMYC 477

Query: 92   KSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQ 151
            KSLPLSKDLDPQES+HGEELLSM  NVLVQLFWRT + GYF+EAIMVLEFGLT+RR+ WQ
Sbjct: 478  KSLPLSKDLDPQESMHGEELLSMVCNVLVQLFWRTRHLGYFIEAIMVLEFGLTIRRYIWQ 537

Query: 152  YKVLLVHLYSHLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYL 211
            YK+LL+HLYSHLGA+ LAYEWYK+LDVKNILMETVSHHILPQMLVS LW + NNLL+DYL
Sbjct: 538  YKILLLHLYSHLGAISLAYEWYKSLDVKNILMETVSHHILPQMLVSPLWGDLNNLLKDYL 597

Query: 212  RFMDDHLRESADLTFLAYRHRNYSKVIEFVQFKERLQRSSQYLVARVESSILQLKQNANN 271
            RFMDDH RESADLTFLAYRHRNYSKVIEFVQFKERLQRS+QYLVARVE+ ILQLKQ A+N
Sbjct: 598  RFMDDHFRESADLTFLAYRHRNYSKVIEFVQFKERLQRSNQYLVARVETPILQLKQKADN 657

Query: 272  IEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYC 331
            IEEEE VLENL  GV F+ELSNEIGSK++TFNED+QSRPWWTPT +KNYLLGPF G+SYC
Sbjct: 658  IEEEEGVLENLNGGVHFVELSNEIGSKNLTFNEDFQSRPWWTPTTEKNYLLGPFEGVSYC 717

Query: 332  PKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYL 391
            PKENL KERE N+ GV+E+KSLLPR+IYLSI  ASA +KE+ E NGS+   K+SSE K+L
Sbjct: 718  PKENLTKEREENVRGVIEKKSLLPRMIYLSIHNASASLKESVEENGSVSGSKISSEFKFL 777

Query: 392  LDRYAKMLGFSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPD 451
            L+R+AKMLGFSL DAVEVV GVSSG+ S EAFG+D + W+NFAVFLNAWNL+SHE + P+
Sbjct: 778  LERHAKMLGFSLSDAVEVVMGVSSGVKSFEAFGSDEIDWINFAVFLNAWNLNSHEPLQPN 837

Query: 452  VNGCRHSTWQVVNTLLKKCILE-VRSMESLVCYPQLDLSVLVQLVTEPLAWHTLVMQSCV 510
             + C    W VV+TLL K I E ++SMESL+C P++DL +LVQLVTEPLAWH LV+QSCV
Sbjct: 838  GDQCGRGIWYVVDTLLVKYISEKIKSMESLICSPRVDLPILVQLVTEPLAWHGLVIQSCV 897

Query: 511  RSSLPSGKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAI 570
            RSSLPSGKKKK+ G  D  +S + +DIR S+QS   +V+EVAKW+   I + EDE ++ I
Sbjct: 898  RSSLPSGKKKKKGGPVDQHSSLVFNDIRDSIQSLCDIVKEVAKWIRGQIDRPEDESVEII 957

Query: 571  FSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGL 630
             SSL    + EGPG+VF +L +LI S+NEAELGDRISQ +K+WSP+DVARK V G    L
Sbjct: 958  LSSLRKKEQDEGPGRVFHVLESLIPSINEAELGDRISQELKTWSPLDVARKIVTGDSTLL 1017

Query: 631  SAFLRICESKIKSLQALKQQMAQV 654
            S FL ICESKIKS QAL QQ+AQ+
Sbjct: 1018 SQFLNICESKIKSFQALNQQIAQI 1041

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434443|ref|XP_002273069.1| PREDICTED: N-alpha-acetyltransferase 25, NatB auxiliary subunit [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745817|emb|CBI15873.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550595|ref|XP_002516347.1| TPR repeat-containing protein R13F6.10, putative [Ricinus communis] gi|223544513|gb|EEF46031.1| TPR repeat-containing protein R13F6.10, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356565964|ref|XP_003551205.1| PREDICTED: phagocyte signaling-impaired protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356539676|ref|XP_003538321.1| PREDICTED: phagocyte signaling-impaired protein-like [Glycine max] Back     alignment and taxonomy information
>gi|297793381|ref|XP_002864575.1| hypothetical protein ARALYDRAFT_358061 [Arabidopsis lyrata subsp. lyrata] gi|297310410|gb|EFH40834.1| hypothetical protein ARALYDRAFT_358061 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|28392921|gb|AAO41896.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|10177022|dbj|BAB10260.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42568628|ref|NP_200653.2| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332009671|gb|AED97054.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query654
TAIR|locus:21712281065 AT5G58450 [Arabidopsis thalian 0.977 0.6 0.566 1.5e-193
DICTYBASE|DDB_G0293234937 DDB_G0293234 "N-acetyltransfer 0.544 0.379 0.223 2.4e-15
FB|FBgn0243511948 psidin "phagocyte signaling im 0.420 0.290 0.256 2.6e-14
UNIPROTKB|Q294E0962 psidin "Phagocyte signaling-im 0.418 0.284 0.258 6.4e-14
ZFIN|ZDB-GENE-041111-190975 naa25 "N(alpha)-acetyltransfer 0.470 0.315 0.218 4.3e-13
UNIPROTKB|Q14CX7972 NAA25 "N-alpha-acetyltransfera 0.469 0.315 0.229 1.7e-12
RGD|1305685970 Naa25 "N(alpha)-acetyltransfer 0.472 0.318 0.230 3.5e-12
MGI|MGI:2442563972 Naa25 "N(alpha)-acetyltransfer 0.425 0.286 0.243 3.5e-12
POMBASE|SPBC1215.02c811 naa25 "NatB N-acetyltransferas 0.359 0.289 0.257 4.4e-11
UNIPROTKB|Q17DK2940 psidin "Phagocyte signaling-im 0.397 0.276 0.210 5.7e-08
TAIR|locus:2171228 AT5G58450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1875 (665.1 bits), Expect = 1.5e-193, P = 1.5e-193
 Identities = 374/660 (56%), Positives = 482/660 (73%)

Query:     1 MEAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKXXXXXXXXXXIKELGWFIT 60
             +E++L+YFL FGHLAC+ SDVE +L VLS +KK   +E L            K LG   T
Sbjct:   421 LESLLQYFLKFGHLACYASDVEAYLQVLSPNKKAGFVEMLVKNSDSSASAT-KVLGQTTT 479

Query:    61 LKKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLV 120
             + K+QEL GN + L  DE+E SAV+++++YC++L LSKDLDPQES+ GEELLS+ SN+LV
Sbjct:   480 ILKVQELTGNIFGLPTDEIEASAVKLAKLYCQNLSLSKDLDPQESMFGEELLSLISNMLV 539

Query:   121 QLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKN 180
             QLFWRT ++GY  EAIMVLE GLT+R H WQYK+LL+H+YS++GALPLA+E YKALDVKN
Sbjct:   540 QLFWRTRDFGYLAEAIMVLELGLTIRGHVWQYKILLLHIYSYVGALPLAFERYKALDVKN 599

Query:   181 ILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEF 240
             IL ETVSHHIL QML S +WV+ +NLL+DYL+FMDDHLRESADLTFLAYRHRNYSKVIEF
Sbjct:   600 ILTETVSHHILRQMLESPMWVDLSNLLKDYLKFMDDHLRESADLTFLAYRHRNYSKVIEF 659

Query:   241 VQFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSV 300
             V FK+RLQ S+QY  ARVE+S+LQLKQNA++ EEEE +LENLK GV  +ELSNEIGS+++
Sbjct:   660 VLFKQRLQHSNQYQAARVEASVLQLKQNADSFEEEERILENLKSGVQLVELSNEIGSRTL 719

Query:   301 TFNEDWQSRPWWTPTPDKNYLLGPFAGISYCP-KENLMKEREANILGVVERKSLLPRLIY 359
              FNED Q+RPWWTP P+KNYLLGPF  ISYCP KEN+ +ERE N+   ++RKSLLPR+IY
Sbjct:   720 KFNEDMQTRPWWTPCPEKNYLLGPFEEISYCPPKENVKEEREENMKRAIQRKSLLPRMIY 779

Query:   360 LSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLGFSLRDAXXXXXXXXXXXXX 419
             LSIQ     +KE+ E NGS  D  V  ELK LL+ Y KMLG SL DA             
Sbjct:   780 LSIQCTPTALKESVETNGSGGDIDVCEELKCLLEDYTKMLGCSLSDAVEMITEISQGART 839

Query:   420 XXAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILE-VRSME 478
               + G+++V WLNFAVF NAW+LSS E          H  W V+N+L ++ IL+ VRSM 
Sbjct:   840 SESLGSNLVDWLNFAVFWNAWSLSSQE----------H--WHVLNSLFERLILDRVRSMG 887

Query:   479 SL---VCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSADH-STSPLS 534
             S     CY   D+ VLVQ++TEPLAWH+L++Q+C RSSLPSGKKKK++  +D  S+SP+S
Sbjct:   888 SSDMSSCYS--DVQVLVQIITEPLAWHSLIIQACTRSSLPSGKKKKKNQHSDQLSSSPIS 945

Query:   535 HDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLI 594
               I+ S+Q     +++V+ WL + +   ED +++   ++L+ +G   GPGQ+  +L + I
Sbjct:   946 QAIKDSIQLLCSTIQDVSNWLLNQLNNPEDGQVEGFLTTLKRDGNAAGPGQILGVLESFI 1005

Query:   595 SSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICESKIKSLQALKQQMAQV 654
             +S  E+E+G+RI QA+KSW+  D ARK V  Q+  L  FL+ICESK K L+ LKQQM+ V
Sbjct:  1006 ASSEESEVGNRIFQALKSWNTADTARKTVMAQQRVLREFLQICESKRKLLETLKQQMSHV 1065
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005829 "cytosol" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
DICTYBASE|DDB_G0293234 DDB_G0293234 "N-acetyltransferase, non-catalytic subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0243511 psidin "phagocyte signaling impaired" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q294E0 psidin "Phagocyte signaling-impaired protein" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041111-190 naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q14CX7 NAA25 "N-alpha-acetyltransferase 25, NatB auxiliary subunit" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1305685 Naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2442563 Naa25 "N(alpha)-acetyltransferase 25, NatB auxiliary subunit" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
POMBASE|SPBC1215.02c naa25 "NatB N-acetyltransferase complex regulatory subunit Naa25" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|Q17DK2 psidin "Phagocyte signaling-impaired protein" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
pfam09797364 pfam09797, NatB_MDM20, N-acetyltransferase B compl 5e-62
>gnl|CDD|220409 pfam09797, NatB_MDM20, N-acetyltransferase B complex (NatB) non catalytic subunit Back     alignment and domain information 
 Score =  210 bits (536), Expect = 5e-62
 Identities = 92/305 (30%), Positives = 154/305 (50%), Gaps = 6/305 (1%)

Query: 2   EAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITL 61
           + VL+YF  FG   C   D++ +L  L  +K+  L+E+L S   S  ++   +L   I  
Sbjct: 66  DLVLQYFDRFGDKLCCFGDLKKYLEDLDKEKRKALIEKLLSKIGSEKSD-ENDLIRHINA 124

Query: 62  KKIQELIGNTYKLLVDELERSAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQ 121
            K++ L G  + L  + +     ++  +Y + L L K L   E    ++L  +A N L+ 
Sbjct: 125 LKLERLCGLWHSLPEESVIALVSELYLLYEEGLSLEKKL-ATERQPSDDLALLAVNSLLD 183

Query: 122 LFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALDVKNI 181
           L+  T +  Y +EAI +LE GL    H +  K+LL+ LY  LGA  LA E Y+ LD+KNI
Sbjct: 184 LYLSTKDLEYLLEAIALLENGLKKSPHNYDLKLLLIRLYLLLGAASLALEHYEKLDIKNI 243

Query: 182 LMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFV 241
             +T+ H +  ++        +++     LRF  + LRE+++L   A+ + +YSK+ EF+
Sbjct: 244 QHDTLGHLLFTRLSTGGPNKSASSAFEQALRFYLNSLRETSELISKAFENGSYSKIEEFI 303

Query: 242 QFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVT 301
           +F+ RL  S    +  VE+  L    N   +E  ++ LE L        L N I  + ++
Sbjct: 304 EFRRRLTNSLSRAMLAVENLRLSRLLNGKRVELLKAYLEYLSQI----WLENRIDLEELS 359

Query: 302 FNEDW 306
            N D+
Sbjct: 360 DNRDF 364

This is the non-catalytic subunit of the N-terminal acetyltransferase B complex (NatB). The NatB complex catalyzes the acetylation of the amino-terminal methionine residue of all proteins beginning with Met-Asp or Met-Glu and of some proteins beginning with Met-Asn or Met-Met. In Saccharomyces cerevisiae this subunit is called MDM20 and in Schizosaccharomyces pombe it is called Arm1. NatB acetylates the Tpm1 protein and regulates and tropomyocin-actin interactions. This subunit is required by the NatB complex for the N-terminal acetylation of Tpm1. Length = 364

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 654
KOG2053932 consensus Mitochondrial inheritance and actin cyto 100.0
PF09797365 NatB_MDM20: N-acetyltransferase B complex (NatB) n 100.0
PF1455968 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN 92.43
PF1343265 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL 85.74
PF12569517 NARP1: NMDA receptor-regulated protein 1 ; InterPr 83.51
PF03704146 BTAD: Bacterial transcriptional activator domain; 81.0
>KOG2053 consensus Mitochondrial inheritance and actin cytoskeleton organization protein [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=2.7e-93  Score=802.05  Aligned_cols=604  Identities=27%  Similarity=0.336  Sum_probs=553.3

Q ss_pred             HHHHHHHHHcCCCcccHHHHHHhHhhCCHhHHHHHHHHHHhhccCCCccchhHHHHHHHHHHHHHHHcCcCCCchHHHHH
Q 006245            2 EAVLEYFLSFGHLACFTSDVEDFLLVLSLDKKTELLERLKSSSTSHSTESIKELGWFITLKKIQELIGNTYKLLVDELER   81 (654)
Q Consensus         2 e~L~~Yf~kFg~KpCCF~DLk~YL~~L~~ee~~~fle~l~~~v~~~ss~~~k~L~~~Ina~KL~r~lg~~~~ls~~e~~~   81 (654)
                      |.+..||++||+|||||.|+++|+..|+++++..|++.+....+. ++.+++.++.|+|+.+++|++|.+..+|+++..+
T Consensus       326 e~~~~y~~kfg~kpcc~~Dl~~yl~~l~~~q~~~l~~~l~~~~~~-~s~~~k~l~~h~c~l~~~rl~G~~~~l~ad~i~a  404 (932)
T KOG2053|consen  326 EMLSYYFKKFGDKPCCAIDLNHYLGHLNIDQLKSLMSKLVLADDD-SSGDEKVLQQHLCVLLLLRLLGLYEKLPADSILA  404 (932)
T ss_pred             HHHHHHHHHhCCCcHhHhhHHHhhccCCHHHHHHHHHHhhccCCc-chhhHHHHHHHHHHHHHHHHhhccccCChHHHHH
Confidence            467899999999999999999999999999999999988864433 4567899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCccCCcchHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcCCCchhHHHHHHHHHH
Q 006245           82 SAVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYS  161 (654)
Q Consensus        82 la~~l~~~Y~~sL~l~~~L~~TE~qpaDeL~LLAa~~Ll~l~~~t~d~~~Ll~AI~LLE~~L~kSp~NfqlkLLLVrLY~  161 (654)
                      ++++|...|++++.+++++.+||+++||+|+++|+|.|+++|++++|..++++||++||+++++||||||+||||||||+
T Consensus       405 ~~~kl~~~ye~gls~~K~ll~TE~~~g~~~llLav~~Lid~~rktnd~~~l~eaI~LLE~glt~s~hnf~~KLlLiriY~  484 (932)
T KOG2053|consen  405 YVRKLKLTYEKGLSLSKDLLPTEYSFGDELLLLAVNHLIDLWRKTNDLTDLFEAITLLENGLTKSPHNFQTKLLLIRIYS  484 (932)
T ss_pred             HHHHHHHHHhccccccccccccccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCChHHHHHHhcccCCchHHhhhhhhhhhhhcccCccchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCcchhhHH
Q 006245          162 HLGALPLAYEWYKALDVKNILMETVSHHILPQMLVSSLWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSKVIEFV  241 (654)
Q Consensus       162 lLGa~s~A~~~y~~LdIK~IQ~DTLgHlil~Rlst~p~~~~~~~ll~~~l~FY~~s~ket~e~I~~AFe~GSYSKI~efi  241 (654)
                      +|||++.|.++|..|||||||+|||||++|+|+.++|.++.+.+.++.+++||+++++|+||+|..||++|+||||+||+
T Consensus       485 ~lGa~p~a~~~y~tLdIK~IQ~DTlgh~~~~~~~t~g~~~~~s~~~~~~lkfy~~~~kE~~eyI~~AYr~g~ySkI~em~  564 (932)
T KOG2053|consen  485 YLGAFPDAYELYKTLDIKNIQTDTLGHLIFRRAETSGRSSFASNTFNEHLKFYDSSLKETPEYIALAYRRGAYSKIPEML  564 (932)
T ss_pred             HhcCChhHHHHHHhcchHHhhhccchHHHHHHHHhcccchhHHHHHHHHHHHHhhhhhhhHHHHHHHHHcCchhhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHhhhccccccccccccCCCccccccccccccccCCCCCCCCC
Q 006245          242 QFKERLQRSSQYLVARVESSILQLKQNANNIEEEESVLENLKCGVDFLELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYL  321 (654)
Q Consensus       242 eF~eRL~nSl~r~~~~vE~lrl~L~~~~~~~~e~~~vle~L~~~~~~le~~~Ei~~~~LsDNRDf~vfpswep~~~~~~l  321 (654)
                      .|++||+||.|++.+.+|+++++++.+.++.++.....+++    +..+.+++|+|.+|+|||||++||+|+|.+.+   
T Consensus       565 ~fr~rL~~S~q~~a~~VE~~~l~ll~~~~~~~q~~~~~~~~----~l~~~e~~I~w~~L~DNRDl~~~~~w~p~~e~---  637 (932)
T KOG2053|consen  565 AFRDRLMHSLQKWACRVENLQLSLLCNADRGTQLLKLLESM----KLPPSEDRIQWVSLSDNRDLNAIPYWDPEDEN---  637 (932)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhcc----ccCcchhhcccccccccccccccccCCCcchh---
Confidence            99999999999999999999999999998877765565544    34455577999999999999999999998774   


Q ss_pred             CCCCCccccc-cchhhhHHHHhhHHHHHHhhhhhhHHHHHHhhccccccchhhhcCCCcCccchhHHHHHHHHHHHHHhc
Q 006245          322 LGPFAGISYC-PKENLMKEREANILGVVERKSLLPRLIYLSIQTASACVKENFEVNGSICDPKVSSELKYLLDRYAKMLG  400 (654)
Q Consensus       322 ~~p~e~~~~~-p~e~~~~~~~~s~~~~l~~rsl~~rli~l~~~~~~~~~~e~~~~~g~~~~~~~~~e~~~ll~~~~~~~~  400 (654)
                            ..+| +||...+|.+-+-.|.+.+| |++++|++++.|.+..+.+.+++++   +.++..|+..++++|.+.++
T Consensus       638 ------~~~e~~k~s~kEe~~~l~~rSi~lr-Ll~~~i~l~h~~~~k~~~~salt~~---~mevl~el~~ll~~~t~~~~  707 (932)
T KOG2053|consen  638 ------FAEELKKESFKEETEWLNLRSIFLR-LLRELIILAHPNGEKDLEKSALTAK---VMEVLRELELLLEQYTSVLI  707 (932)
T ss_pred             ------hHHhhhhcChHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcchHHHHHhcc---chHHHHHHHHHHHHHHHhhh
Confidence                  2223 66667776665555767777 8888889999999887888888887   78899999999999999999


Q ss_pred             cchhhhhHHhhhccccccccccccchhHHHHHHHHHHHhhhccCccccccCCCCCCcchHHHHHHHHHHHHHHhhcCCcc
Q 006245          401 FSLRDAVEVVSGVSSGLNSSEAFGADMVGWLNFAVFLNAWNLSSHEVVLPDVNGCRHSTWQVVNTLLKKCILEVRSMESL  480 (654)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  480 (654)
                      .+..++|++.+-.+.|++...-+++        ++|++||++.+...            |++-.++++.+.  ++++..-
T Consensus       708 ~~~~~liq~~~~~~~~~r~g~l~~s--------~~f~~~~~~lv~~~------------~~~s~~l~e~~~--v~t~i~t  765 (932)
T KOG2053|consen  708 PSASFLIQFPLLESQGVRLGDLLNS--------LEFLMAVPLLVKDL------------WSVSHPLLELTK--VRTEIIT  765 (932)
T ss_pred             hhhHHhhhhhhhccccccccchhhh--------HHHHHHHHHHHHHH------------HhccchHHHHHH--HHHHHHH
Confidence            9999999999999999887755554        99999999988777            999999999998  4444433


Q ss_pred             -ccccCccHHHHHHHhccchhHHHHHHHHHHhhcCCCCcccccCCCCC-CCCCcchhhHHhhHHhhhhHHHHHHHHHHhh
Q 006245          481 -VCYPQLDLSVLVQLVTEPLAWHTLVMQSCVRSSLPSGKKKKRSGSAD-HSTSPLSHDIRGSVQSTSGVVEEVAKWLGHH  558 (654)
Q Consensus       481 -~~~~~~~~~~~~~~~~e~~~w~~~~~q~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  558 (654)
                       +.++-.++++.||-.++|+.||-..+++|.+..+|++++++|...++ +..|++++|+.+.|+-.|  .+.+..|.-.+
T Consensus       766 ~l~s~~~~~~~~~q~~~~~~~w~~~~~~~k~~~sl~~~~~~l~~i~s~~L~~s~~~~av~~pvk~~~--~kk~~~~~~t~  843 (932)
T KOG2053|consen  766 DLISLLRIKDKEVQKEKLPLLWIVDGKLIKALQSLLSLYVFLKNIFSDKLKVSSVPTAVKEPVKLKG--DKKASVQAYTK  843 (932)
T ss_pred             HHHHHHHHHHHHhhhccCCchhhhhHHHHhhHHHHHHHHHHHHHHHhhhhccccccccccchhhhhh--hhHHHHHHHHh
Confidence             55556789999999999999999999999999999999999999999 777899999999999999  89999999999


Q ss_pred             hCCChhHHHHHHHHHHHhcCCCCCCchhHHhhhhhhhccchhhhhhhhhhhcccCChHHHHHHhhhhhhhHHHHHHHHhH
Q 006245          559 IKKSEDEKLDAIFSSLEANGRGEGPGQVFRLLGTLISSLNEAELGDRISQAMKSWSPVDVARKFVAGQRAGLSAFLRICE  638 (654)
Q Consensus       559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  638 (654)
                      +++||+.++..-+....+.+...+||+|..+++.+|+.-.+++.|.+|++++++ .++||.++.+..+..+++||+++|+
T Consensus       844 ~~~~e~~~~~~el~~~~~~~~~n~~~~i~g~~~~~lal~~E~~ids~i~~~l~~-~~~d~~~k~~~~~~~~~~e~~~l~e  922 (932)
T KOG2053|consen  844 LKKPECGQVLQELDRKLAENLSNIKNSILGYLKSFLALELESMIDSSIGPELEG-AKADVEGKHNPSASRLLREFLNLCE  922 (932)
T ss_pred             hcchHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHhhhhhhccccccchhhhh-hhHhHhhhcchHHHHHHHHHHHHHH
Confidence            999999999999988888888889999999999999999999999999999999 9999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q 006245          639 SKIKSLQALK  648 (654)
Q Consensus       639 ~~~~~~~~~~  648 (654)
                      +|++..+.+|
T Consensus       923 ~k~~~~~~lk  932 (932)
T KOG2053|consen  923 DKHTTIKKLK  932 (932)
T ss_pred             HHHHHHHhcC
Confidence            9999987654

>PF09797 NatB_MDM20: N-acetyltransferase B complex (NatB) non catalytic subunit; InterPro: IPR019183 This is the non-catalytic subunit of the N-terminal acetyltransferase B complex (NatB) Back     alignment and domain information
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A Back     alignment and domain information
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B Back     alignment and domain information
>PF12569 NARP1: NMDA receptor-regulated protein 1 ; InterPro: IPR021183 This group represents N-terminal acetyltransferase A (NatA) auxiliary subunit and represents a non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala Back     alignment and domain information
>PF03704 BTAD: Bacterial transcriptional activator domain; InterPro: IPR005158 Found in the DNRI/REDD/AFSR family of regulators, this region of AFSR (P25941 from SWISSPROT) along with the C-terminal region is capable of independently directing actinorhodin production Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 76.0 bits (186), Expect = 2e-14
 Identities = 89/569 (15%), Positives = 171/569 (30%), Gaps = 162/569 (28%)

Query: 139 LEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKALD-VKNILMETVSHHIL--PQML 195
           ++F     ++  QYK +L        A    ++     D  K+IL +    HI+     +
Sbjct: 7   MDFETGEHQY--QYKDILSVF---EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 196 VSS---LWVESNNLLRDYLRFMDDHLRESADLTFLAYRHRNYSK-----VIEFVQFKERL 247
             +    W   +       +F+++ LR   +  FL    +   +        +++ ++RL
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRMYIEQRDRL 119

Query: 248 QRSSQ----YLVARVESSILQLKQNANNIEEEE------------SVL-------ENLKC 284
              +Q    Y V+R++   L+L+Q    +   +            + +         ++C
Sbjct: 120 YNDNQVFAKYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 285 GVDF----LELSNEIGSKSVTFNEDWQSRPWWTPTPDKNYLLGPFAGISYCPKENLMKER 340
            +DF    L L N    ++V   E  Q         D N+        +   + + ++  
Sbjct: 179 KMDFKIFWLNLKNCNSPETVL--EMLQKL---LYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 341 EANILGVVERKSLLPR-LIYLS-IQTASACVKENFEVNGSIC-------DPKVSSELKYL 391
              +L    +       L+ L  +Q A       F ++   C         +V+  L   
Sbjct: 234 LRRLL----KSKPYENCLLVLLNVQNAK--AWNAFNLS---CKILLTTRFKQVTDFLSAA 284

Query: 392 LDRYAKM----LGFSLRDAVEVVS---GVSSGLNSSEA----------FGA---DMVG-W 430
              +  +    +  +  +   ++             E                 D +  W
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 431 LNF------------AVFLNAWNLSSHE--------VVLP-DVN---GCRHSTW------ 460
            N+               LN   L   E         V P   +         W      
Sbjct: 345 DNWKHVNCDKLTTIIESSLN--VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS 402

Query: 461 ---QVVNTLLKKCILEVRSMESLVCYPQLDLSVLVQLVTEPLAWH-TLVMQSCVRSSLPS 516
               VVN L K  ++E +  ES +  P + L + V+L  E  A H ++V    +  +  S
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY-ALHRSIVDHYNIPKTFDS 461

Query: 517 GKKKKRSGSADHSTSPLSHDIRGSVQSTSGVVEEVAKWLGHHIKKSEDEKLDAIFSS--- 573
                          P   D            +     +GHH+K  E  +   +F     
Sbjct: 462 -----------DDLIPPYLD------------QYFYSHIGHHLKNIEHPERMTLFRMVFL 498

Query: 574 ----LEANGRGEG-----PGQVFRLLGTL 593
               LE   R +       G +   L  L
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQL 527
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query654
3vtx_A184 MAMA; tetratricopeptide repeats (TPR) containing p 81.69
3bee_A93 Putative YFRE protein; putaive YFRE protein, struc 80.54
2fo7_A136 Synthetic consensus TPR protein; tetratricopeptide 80.41
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A Back     alignment and structure
Probab=81.69  E-value=2.4  Score=37.92  Aligned_cols=47  Identities=23%  Similarity=0.142  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHhhhhcCCCchhHHHHHHHHHHHcCChHHHHHHhccc
Q 006245          130 GYFMEAIMVLEFGLTVRRHAWQYKVLLVHLYSHLGALPLAYEWYKAL  176 (654)
Q Consensus       130 ~~Ll~AI~LLE~~L~kSp~NfqlkLLLVrLY~lLGa~s~A~~~y~~L  176 (654)
                      +..-+|+..++.++..+|.|......+..+|..+|-...|.+.+...
T Consensus        19 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~   65 (184)
T 3vtx_A           19 GDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKF   65 (184)
T ss_dssp             TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999988764
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query654
d1nzna_122 Mitochondria fission protein Fis1 {Human (Homo sap 84.34
d2ff4a2179 Probable regulatory protein EmbR, middle domain {M 81.94
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondria fission protein Fis1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.34  E-value=0.98  Score=37.98  Aligned_cols=81  Identities=17%  Similarity=0.115  Sum_probs=58.3

Q ss_pred             HHHHHHHHHhhCCCCCCCCCccCCcchHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhcCCCchh--HHHHHHHHH
Q 006245           83 AVQMSEMYCKSLPLSKDLDPQESIHGEELLSMASNVLVQLFWRTSNYGYFMEAIMVLEFGLTVRRHAWQ--YKVLLVHLY  160 (654)
Q Consensus        83 a~~l~~~Y~~sL~l~~~L~~TE~qpaDeL~LLAa~~Ll~l~~~t~d~~~Ll~AI~LLE~~L~kSp~Nfq--lkLLLVrLY  160 (654)
                      ..+..+.|++++.++.+       ..+-+.-+| .+|+    ++++.+..-+|+.+|+.++..+|.+.+  ....|-..|
T Consensus        15 l~~Ae~~Y~~aL~~~p~-------~~~~~~n~a-~~L~----~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y   82 (122)
T d1nzna_          15 LLKFEKKFQSEKAAGSV-------SKSTQFEYA-WCLV----RTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN   82 (122)
T ss_dssp             HHHHHHHHHHHHHHSCC-------CHHHHHHHH-HHHT----TSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCC-------CHHHHHHHH-HHHH----HhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence            35666789888754431       111122222 2232    457788889999999999999988866  556799999


Q ss_pred             HHcCChHHHHHHhcc
Q 006245          161 SHLGALPLAYEWYKA  175 (654)
Q Consensus       161 ~lLGa~s~A~~~y~~  175 (654)
                      ..+|-...|.+.|+.
T Consensus        83 ~~~g~~~~A~~~~~~   97 (122)
T d1nzna_          83 YRLKEYEKALKYVRG   97 (122)
T ss_dssp             HHTTCHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHH
Confidence            999999999999875
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure