Citrus Sinensis ID: 006340
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 649 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WVZ1 | 743 | Putative metallophosphoes | yes | no | 0.950 | 0.830 | 0.656 | 0.0 | |
| Q8BXJ9 | 643 | Transmembrane protein 62 | yes | no | 0.697 | 0.704 | 0.270 | 3e-38 | |
| Q0P6H9 | 643 | Transmembrane protein 62 | yes | no | 0.699 | 0.706 | 0.290 | 3e-38 |
| >sp|Q0WVZ1|Y3330_ARATH Putative metallophosphoesterase At3g03305 OS=Arabidopsis thaliana GN=At3g03305 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/625 (65%), Positives = 501/625 (80%), Gaps = 8/625 (1%)
Query: 27 GRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTD 86
GRRVI+ R G + +IW VQLSDLHFSVHHP+RA DFK IVGPAL++I+PSLVLITGDLTD
Sbjct: 46 GRRVIEARTG-QDLIWVVQLSDLHFSVHHPERAIDFKNIVGPALALINPSLVLITGDLTD 104
Query: 87 GKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFS 146
GKSKD+LTMK NE EW+EY++VMQDV+KRSGL KSIFYD+RGNHDNFGVP VG S DFFS
Sbjct: 105 GKSKDMLTMKLNEDEWLEYESVMQDVVKRSGLNKSIFYDLRGNHDNFGVPSVGSSVDFFS 164
Query: 147 KHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSE 206
K+SINGQ+GRK NVN++TV+ + KHLFVG D+TM +GLRGPTNLFGHP D+LL+ +DS
Sbjct: 165 KYSINGQMGRKGNVNTITVETSERKHLFVGIDTTMHIGLRGPTNLFGHPTDELLSSLDSH 224
Query: 207 LSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLK 266
LSQW++QS KPV KI+FGHFP+SF+A SHS +SL+D+FLKHS+SAYLCGHLH+RFGKNLK
Sbjct: 225 LSQWDNQSAKPVAKISFGHFPLSFTALSHSQKSLKDVFLKHSISAYLCGHLHSRFGKNLK 284
Query: 267 RHHYMDHNFLSQK-FFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAI 325
RHH+ LS FQ NM Q ST NCS GA EFWEWEMGDWRK+RAMRI+AI
Sbjct: 285 RHHHSGGISLSDNDLFQLNMRQSGAESTSNCSFGALPAAEFWEWEMGDWRKNRAMRIMAI 344
Query: 326 DRGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRS-SSQKYECEHMVAQSYATIRALVFS 384
DRGH+SYVD+DFKS +KTI++PTFPLDSRFMS S + KYEC+HM++ SY IRA+VFS
Sbjct: 345 DRGHVSYVDLDFKSKPQKTIILPTFPLDSRFMSTSFARHKYECQHMISSSYDAIRAIVFS 404
Query: 385 VSPILSVVAKVYDSRSGKHDLVMEELMRKR-TDNSSRG-DLYAAPWNYRAFEDSSPQRFW 442
S ++ VVA+VYDS G +LVME MRK D+SS G ++ PWNYRAFED P RFW
Sbjct: 405 HSLVVEVVARVYDSSPGFDNLVMEAPMRKHGGDSSSSGATFFSLPWNYRAFEDPLPDRFW 464
Query: 443 LEIEVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFS 502
L+IEVTDI GRL+ SE+RPFSINGLS+K+SWTW EF VMGCQW LYYP+LW A+Y LF
Sbjct: 465 LQIEVTDIKGRLTLSEMRPFSINGLSSKVSWTWNEFRVMGCQWAALYYPILWPALYSLFL 524
Query: 503 ILIVPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPW 562
+ ++PK ++I+ KKQYT K F A +G I + W+LQ+LC+M VVW+G + YLFYL+ FPW
Sbjct: 525 VFLIPKCIIIVFKKQYTLKKFIAKKGPITLVLWILQDLCRMPVVWFGYMAYLFYLIFFPW 584
Query: 563 FVGQVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAA 622
F G+VF D YMT MGWVV + H+YIG PDVMV+V+PH+VFVV+P++LV
Sbjct: 585 FSGEVFADSGDRAYMTIMGWVVTSSGADRKHEYIGQPDVMVVVIPHVVFVVIPSVLVVCC 644
Query: 623 LAAEKELYR---VSLSGKKEDDHEQ 644
L AE+E+Y+ ++SGKKEDDH++
Sbjct: 645 LVAEREIYKDHIRTVSGKKEDDHDR 669
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: -EC: .EC: - |
| >sp|Q8BXJ9|TMM62_MOUSE Transmembrane protein 62 OS=Mus musculus GN=Tmem62 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 247/537 (45%), Gaps = 84/537 (15%)
Query: 38 EHVIWAVQLSDLHFS-VHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMK 96
++ W +Q+SD+H S P RA ++ + +I P+LVL TGDLTD K+K+ L +
Sbjct: 53 NNIFWGLQISDIHLSRFQDPGRALALEKFCSETIDIIQPALVLATGDLTDAKTKEHLGSR 112
Query: 97 QNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGR 156
Q+EVEW YQ +++ K +EK+ + DI+GNHD + +P + +++ K+S + G
Sbjct: 113 QHEVEWQTYQRILK---KTRVMEKTKWLDIKGNHDAYNIPSLESIANYYRKYSAVRKDGA 169
Query: 157 KQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTK 216
+++S + F+ D+T G + P N FG ++ + E+ E S+ +SQS +
Sbjct: 170 FHHIHSTPFG----NYSFISVDATQRPGPKRPYNFFGILDEKQMEEL-VEFSKKSSQSNQ 224
Query: 217 PVTKITFGHFPVSFSASSHSG-RSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNF 275
I FGHF S S G R++ S +AYLCGHLHT G
Sbjct: 225 ---TIWFGHFTTSTIMSPSPGIRTVMG-----SATAYLCGHLHTLGG------------- 263
Query: 276 LSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAIDRGHISYVDI 335
+P+ T++ + E E+GDW+ +R RI A D S+ D+
Sbjct: 264 -----------LMPVLHTRHFTGTL-------ELEVGDWKDNRRYRIFAFDHDLFSFADV 305
Query: 336 DFKSGFRKTIVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRALVFSVSPILSVVAKV 395
F + +V+ T P + + S ++ E + ++ IR L FS+SPI SV K+
Sbjct: 306 TFD---KWPVVLITNP---KSLLYSCAKHEPLERLFHSTH--IRVLAFSLSPITSVTVKI 357
Query: 396 YDSRSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLS 455
G+ + G ++ WN R + + + +E+ V D GR S
Sbjct: 358 DGGDIGQ-------------ASHLSGPIFILKWNPRNYSNGTHT---IEVFVQDSAGR-S 400
Query: 456 SSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILIVPKALLILSK 515
+ FS A +++ F++ + LF ++++ + +++
Sbjct: 401 RTAHHIFSAQE-DAHLTFDPLASFILLTDH--------YIVARVLFVLIVLIQLTTLITF 451
Query: 516 KQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPWFVGQVFTDGE 572
+ Y GF N + L L K+++ +Y +L Y VL PWFVG++ DG+
Sbjct: 452 RYLAYPELKEPLGFANMTTFSLHILSKINISYYSVLLLTLYTVLGPWFVGEII-DGK 507
|
Mus musculus (taxid: 10090) |
| >sp|Q0P6H9|TMM62_HUMAN Transmembrane protein 62 OS=Homo sapiens GN=TMEM62 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 157/540 (29%), Positives = 243/540 (45%), Gaps = 86/540 (15%)
Query: 36 GPEHVIWAVQLSDLHFS-VHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLT 94
G ++ W +Q+SD+H S P RA D ++ + +I P+LVL TGDLTD K+K+ L
Sbjct: 51 GDSNIFWGLQISDIHLSRFRDPGRAVDLEKFCSETIDIIQPALVLATGDLTDAKTKEQLG 110
Query: 95 MKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQL 154
+Q+EVEW YQ +++ K +EK+ + DI+GNHD F +P + +++ K+S +
Sbjct: 111 SRQHEVEWQTYQGILK---KTRVMEKTKWLDIKGNHDAFNIPSLDSIKNYYRKYSAVRRD 167
Query: 155 GRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQS 214
G V+S + F+ D+T++ G + P N FG D+ E EL +S
Sbjct: 168 GSFHYVHSTPFG----NYSFICVDATVNPGPKRPYNFFG-ILDKKKME---ELLLLAKES 219
Query: 215 TKPVTKITFGHFPVSFSASSHSG-RSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDH 273
++ I FGHF S S G RS+ S AYLCGHLHT G H
Sbjct: 220 SRSNHTIWFGHFTTSTILSPSPGIRSIMS-----SAIAYLCGHLHTLGGLMPVLH----- 269
Query: 274 NFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAIDRGHISYV 333
+ FQ + E E+GDW+ +R RI A D S+
Sbjct: 270 ----TRHFQGTL----------------------ELEVGDWKDNRRYRIFAFDHDLFSFA 303
Query: 334 DIDFKSGFRKTIVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRALVFSVSPILSVVA 393
D+ F + +V+ T P + + S + E ++ ++ IR L FS+S I SV
Sbjct: 304 DLIFG---KWPVVLITNP---KSLLYSCGEHEPLERLLHSTH--IRVLAFSLSSITSVTV 355
Query: 394 KVYDSRSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGR 453
K+ G+ V G ++ WN R + + +E+ V D GR
Sbjct: 356 KIDGVHLGQAVHV-------------SGPIFVLKWNPRNYSSGTHN---IEVIVQDSAGR 399
Query: 454 LSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILIVPKALLIL 513
S S FS+ + +S+ F++ + M + +LIV L IL
Sbjct: 400 -SKSVHHIFSVQE-NNHLSFDPLASFILRTD---------HYIMARVLFVLIVLSQLTIL 448
Query: 514 SKKQYT-YKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPWFVGQVFTDGE 572
+Y Y GFIN ++ L L K+++ +Y +L Y VL PWF G++ DG+
Sbjct: 449 IIFRYRGYPELKEPSGFINLTSFSLHVLSKINIFYYSVLLLTLYTVLGPWFFGEI-IDGK 507
|
Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 649 | ||||||
| 224098772 | 738 | predicted protein [Populus trichocarpa] | 0.987 | 0.868 | 0.683 | 0.0 | |
| 224112409 | 737 | predicted protein [Populus trichocarpa] | 0.987 | 0.869 | 0.674 | 0.0 | |
| 255547480 | 750 | hydrolase, putative [Ricinus communis] g | 0.992 | 0.858 | 0.664 | 0.0 | |
| 359495774 | 728 | PREDICTED: putative metallophosphoestera | 0.946 | 0.843 | 0.705 | 0.0 | |
| 357507853 | 742 | Transmembrane protein [Medicago truncatu | 0.981 | 0.858 | 0.651 | 0.0 | |
| 356566957 | 743 | PREDICTED: putative metallophosphoestera | 0.963 | 0.841 | 0.666 | 0.0 | |
| 298205055 | 696 | unnamed protein product [Vitis vinifera] | 0.896 | 0.836 | 0.674 | 0.0 | |
| 297832974 | 2033 | hypothetical protein ARALYDRAFT_317213 [ | 0.950 | 0.303 | 0.654 | 0.0 | |
| 6714410 | 2042 | unknown protein [Arabidopsis thaliana] | 0.950 | 0.302 | 0.656 | 0.0 | |
| 21618069 | 743 | unknown [Arabidopsis thaliana] | 0.950 | 0.830 | 0.656 | 0.0 |
| >gi|224098772|ref|XP_002311262.1| predicted protein [Populus trichocarpa] gi|222851082|gb|EEE88629.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/661 (68%), Positives = 539/661 (81%), Gaps = 20/661 (3%)
Query: 8 LLLFITTPISHAETTEKADG--------------RRVIQLREGPEHVIWAVQLSDLHFSV 53
+LL I T IS + + ++ +G RVI+++ GPE +IW VQLSDLHFSV
Sbjct: 1 MLLCIFTTISTSVSIQQEEGGAEELISSSPRKWEDRVIEVKGGPESIIWIVQLSDLHFSV 60
Query: 54 HHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113
HHP+RA DFKRIVGPAL MI+PSLVLITGDLTDGKSKDLLTMKQNEVEW+EY+NVM+DV
Sbjct: 61 HHPERALDFKRIVGPALKMINPSLVLITGDLTDGKSKDLLTMKQNEVEWIEYRNVMEDVA 120
Query: 114 KRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHL 173
+RSGL+K IFYD+RGNHDNFGVP +GGS DFFS +SINGQ GRK N+NSVTV+ GD KHL
Sbjct: 121 RRSGLDKRIFYDLRGNHDNFGVPEIGGSSDFFSNYSINGQFGRKGNLNSVTVETGDRKHL 180
Query: 174 FVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS 233
FVG DSTMS G+RGPTNLFGHP DQLL +IDS+LSQW+S+ KP+TKI+FGHFP+SFSA
Sbjct: 181 FVGLDSTMSAGVRGPTNLFGHPTDQLLAQIDSQLSQWDSEKGKPITKISFGHFPLSFSAL 240
Query: 234 SHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFL-SQKFFQSNMHQIPLGS 292
SHS +SL+D+FLKHS+SAYLCGHLHTRFGKNLKRHH + NFL S +FFQ N HQ P S
Sbjct: 241 SHSQKSLKDVFLKHSISAYLCGHLHTRFGKNLKRHHQSNENFLSSHEFFQLNRHQKPSES 300
Query: 293 TKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAIDRGHISYVDIDFKSGFRKTIVVPTFPL 352
KNCSS AP + EFWEWEMGDWRKSRAMRI+A+DRGH+SY+DIDFKSG +KTIV+PTFPL
Sbjct: 301 AKNCSSQAPPLKEFWEWEMGDWRKSRAMRIMAVDRGHVSYLDIDFKSGTKKTIVLPTFPL 360
Query: 353 DSRFMSRSS-SQKYECEHMVAQSYATIRALVFSVSPILSVVAKVYDSRSGKHDLVMEELM 411
DSRFMS SS Q YEC+HMV S+ TIR +VFS+SPI+SVVA++YD+R G L+ME M
Sbjct: 361 DSRFMSTSSFHQMYECQHMVPFSFETIRCIVFSISPIMSVVARIYDTRPGSPHLIMETTM 420
Query: 412 RKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLSAKI 471
K + SRGD+YAA WN++AFED SP RFWL+IEVTD MGR + SELRPFS+NGLSAKI
Sbjct: 421 TKIVRDVSRGDIYAAAWNFKAFEDPSPDRFWLQIEVTDAMGRSTLSELRPFSVNGLSAKI 480
Query: 472 SWTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILIVPKALLILSKKQYTYKNFAANRGFIN 531
SWTWKEFFVMGCQW LYYP+ W A+Y +FSIL++PK LI SK+QY+YK +G IN
Sbjct: 481 SWTWKEFFVMGCQWAALYYPIFWSAIYLMFSILLIPKICLIFSKEQYSYKTSICEKGLIN 540
Query: 532 CIAWVLQELCKMHVVWYGILGYLFYLVLFPWFVGQVFTDGESWGYMTYMGWVVRALDNQE 591
CIAWVLQ+LC++ VVW+GILGYL YL+ PW +GQVFTDGE+ GYMTY GWVV+ +N E
Sbjct: 541 CIAWVLQDLCRIPVVWFGILGYLIYLISCPWLIGQVFTDGENRGYMTYTGWVVKNFNNSE 600
Query: 592 SHKYIGSPDVMVIVLPHIVFVVLPAILVSAALAAEKELYR---VSLSGKKE-DDHEQENG 647
H+YIGSPD+MV+VL H FVV+P+ILV+ A AAE+ +Y+ +SLSGKKE DD Q+N
Sbjct: 601 KHEYIGSPDIMVVVLSHFFFVVIPSILVAGAFAAERGIYKEHFLSLSGKKEDDDSSQKNK 660
Query: 648 R 648
R
Sbjct: 661 R 661
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112409|ref|XP_002316178.1| predicted protein [Populus trichocarpa] gi|222865218|gb|EEF02349.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/660 (67%), Positives = 536/660 (81%), Gaps = 19/660 (2%)
Query: 8 LLLFITTPISHAETTEKADGR-------------RVIQLREGPEHVIWAVQLSDLHFSVH 54
+LL +TT + + + ++ G RVI+++ GPE V+W VQLSDLHFSVH
Sbjct: 1 MLLCLTTTVPTSVSIQQGGGAEELVSSQPRKWQDRVIEVKGGPESVVWIVQLSDLHFSVH 60
Query: 55 HPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIK 114
HP+RA DFK+IVGPAL MI+PSLVLITGDLTDGKSKDLLTMKQNE EW+EYQNVM+DV +
Sbjct: 61 HPERALDFKKIVGPALKMINPSLVLITGDLTDGKSKDLLTMKQNEDEWIEYQNVMEDVAR 120
Query: 115 RSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLF 174
SGL+KSIFYD+RGNHDNFGVP++GGSFDFFS +SINGQ GRK NVNSVT++ GD KH+F
Sbjct: 121 SSGLDKSIFYDLRGNHDNFGVPVIGGSFDFFSNYSINGQFGRKGNVNSVTLETGDRKHVF 180
Query: 175 VGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS 234
VG DSTMS GLRGPTNLFGHP DQLL++IDS+LSQW+SQ K VTKI+FGHFP+SFSA S
Sbjct: 181 VGLDSTMSTGLRGPTNLFGHPTDQLLSQIDSQLSQWDSQKGKSVTKISFGHFPLSFSAFS 240
Query: 235 HSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFL-SQKFFQSNMHQIPLGST 293
S +SL+D+FLKHS+SAYLCGHLHTRFGKNLKRHH + FL S +FFQ NMHQ P +
Sbjct: 241 ESQKSLRDVFLKHSVSAYLCGHLHTRFGKNLKRHHQSNEKFLSSHRFFQLNMHQEPSENP 300
Query: 294 KNCSSGAPSIGEFWEWEMGDWRKSRAMRILAIDRGHISYVDIDFKSGFRKTIVVPTFPLD 353
KNC AP + EFWEWEMGDWRKSRAMRI+A+DRGH+SY+DIDFKSG +KTIV+PTFPLD
Sbjct: 301 KNCLFQAPPLKEFWEWEMGDWRKSRAMRIVAVDRGHVSYLDIDFKSGTKKTIVLPTFPLD 360
Query: 354 SRFMSRSS-SQKYECEHMVAQSYATIRALVFSVSPILSVVAKVYDSRSGKHDLVMEELMR 412
SRFM SS Q Y C+HMV S+ TIR LVFSVSPI SVVA++YD+R G ++ME M
Sbjct: 361 SRFMLTSSLHQMYGCQHMVPFSFETIRCLVFSVSPITSVVARIYDTRPGSPLMIMETTMT 420
Query: 413 KRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLSAKIS 472
K + SRGD+YAA WNY+AFED SP RFWL+IEV D+MGR + SELRPFS+NGLSAKIS
Sbjct: 421 KFVRDISRGDIYAAAWNYKAFEDPSPVRFWLQIEVIDVMGRSTLSELRPFSVNGLSAKIS 480
Query: 473 WTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILIVPKALLILSKKQYTYKNFAANRGFINC 532
WTWKEFFVMGCQW LYYP+ W A++ + SIL++PK +L+ SKKQY+YKNF + +G INC
Sbjct: 481 WTWKEFFVMGCQWAALYYPIFWSAVFLMLSILLIPKFVLMFSKKQYSYKNFISEKGLINC 540
Query: 533 IAWVLQELCKMHVVWYGILGYLFYLVLFPWFVGQVFTDGESWGYMTYMGWVVRALDNQES 592
IAWVL +LC++HVVW+G LGYL YLV PW +GQVFTDG + GYMT MGW+V+ +++E
Sbjct: 541 IAWVLLDLCRVHVVWFGFLGYLIYLVSCPWLIGQVFTDGGNRGYMTCMGWLVKIFNSREK 600
Query: 593 HKYIGSPDVMVIVLPHIVFVVLPAILVSAALAAEKELYR---VSLSGKKE-DDHEQENGR 648
H YIGSPD+MV+VLPH FVV+P+ILV+ ALAAE+ +Y+ +SLSGKKE DD Q+N R
Sbjct: 601 HDYIGSPDIMVVVLPHFFFVVIPSILVAGALAAERGIYKEHFLSLSGKKEDDDSSQKNKR 660
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547480|ref|XP_002514797.1| hydrolase, putative [Ricinus communis] gi|223545848|gb|EEF47351.1| hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/664 (66%), Positives = 528/664 (79%), Gaps = 20/664 (3%)
Query: 5 VFLLLLFITTPISH---------------AETTEKADGRRVIQLREGPEHVIWAVQLSDL 49
V +L LF T PI+ T K +VI+++ PE VIW VQLSDL
Sbjct: 5 VLMLFLFSTIPITSLSAQIHHQVDETEQLVSTQTKQFESKVIEVKGDPESVIWVVQLSDL 64
Query: 50 HFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVM 109
HFSVHHPDRA DFK+IVGPAL MI+PSLVLITGDLTDGKSKDLLTMKQNE EW+EYQNVM
Sbjct: 65 HFSVHHPDRALDFKKIVGPALQMINPSLVLITGDLTDGKSKDLLTMKQNEDEWLEYQNVM 124
Query: 110 QDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGD 169
+DV+KR GL+K+IFYD+RGNHDNFGVP VGGSFDFF +SI+GQLGR++NVNS+TV+ GD
Sbjct: 125 EDVVKRRGLDKNIFYDLRGNHDNFGVPAVGGSFDFFLNYSISGQLGRRRNVNSITVETGD 184
Query: 170 EKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVS 229
KHLFVG D+TMSVGLRGPTNLFGHP DQLLT+++S+LSQW+SQS K VTKI FGHFPVS
Sbjct: 185 RKHLFVGLDTTMSVGLRGPTNLFGHPTDQLLTQLESQLSQWDSQSNKSVTKIAFGHFPVS 244
Query: 230 FSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFL-SQKFFQSNMHQI 288
FSA SHSG+SL+D FL +SLSAYLCGHLH+RFGKNLKRHH +FL SQKF Q N+HQ+
Sbjct: 245 FSAFSHSGKSLKDTFLNNSLSAYLCGHLHSRFGKNLKRHHQSIKSFLSSQKFLQLNIHQV 304
Query: 289 PLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAIDRGHISYVDIDFKSGFRKTIVVP 348
P STKNCS G EFWEWEMGDWRKSRAMRI+AIDRGH+SY+DIDFKSG RKTIV+P
Sbjct: 305 PSQSTKNCSFGVSPPQEFWEWEMGDWRKSRAMRIMAIDRGHVSYLDIDFKSGARKTIVLP 364
Query: 349 TFPLDSRFMSRSS-SQKYECEHMVAQSYATIRALVFSVSPILSVVAKVYDSRSGKHDLVM 407
TFPLDSR MS SS QKYEC+HM+ S+ T+RALVFSVSPI+SV+A++YD+ G +VM
Sbjct: 365 TFPLDSRTMSTSSWHQKYECQHMIPSSFETVRALVFSVSPIVSVMARIYDANPGTLSMVM 424
Query: 408 EELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGL 467
E M K SRGD YAAPWNY+AFED P RFWL+IEV D+MGR + +ELRPFS+NGL
Sbjct: 425 ETPMTKVVGEMSRGDFYAAPWNYKAFEDPFPDRFWLQIEVIDVMGRSTLTELRPFSVNGL 484
Query: 468 SAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILIVPKALLILSKKQYTYKNFAANR 527
+AKISWTWKEFFVMGCQW YYPL W ++YF+ S+L++PK LLI +KQY+YK+F +
Sbjct: 485 NAKISWTWKEFFVMGCQWAAFYYPLFWSSVYFMLSLLLIPKVLLIFLRKQYSYKSFIVEK 544
Query: 528 GFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPWFVGQVFTDGESWGYMTYMGWVVRAL 587
+N I WVLQ+L ++ + W+G L YLFYL L PW +G VFTDG GYMTYMGWVVR+
Sbjct: 545 SILNGIVWVLQDLSRLSIAWFGFLVYLFYLFLCPWCIGHVFTDGRDLGYMTYMGWVVRSF 604
Query: 588 DNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAALAAEKELYR---VSLSGKKEDDHEQ 644
N + H+YIG PD+MV+VLPH++FVV P+ILV+ ALAAE+ +++ +S SGKKEDD
Sbjct: 605 SNSKRHEYIGFPDIMVVVLPHLLFVVFPSILVAGALAAERGMFKERFLSCSGKKEDDGYS 664
Query: 645 ENGR 648
+N +
Sbjct: 665 QNNQ 668
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495774|ref|XP_002266886.2| PREDICTED: putative metallophosphoesterase At3g03305-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/624 (70%), Positives = 511/624 (81%), Gaps = 10/624 (1%)
Query: 28 RRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDG 87
RRVI + GPE +IW VQLSDLHFS HHPDRA DF+ +VGPALSMI+PSLVLITGDLTDG
Sbjct: 36 RRVIDAKGGPESLIWVVQLSDLHFSAHHPDRALDFRALVGPALSMINPSLVLITGDLTDG 95
Query: 88 KSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK 147
KSKDLL MKQ+E EW EYQ VM+DV+K SGL+K+IFYD+RGNHDNFGVP+VGGSFDFFSK
Sbjct: 96 KSKDLLIMKQDEEEWKEYQKVMEDVVKWSGLDKNIFYDLRGNHDNFGVPVVGGSFDFFSK 155
Query: 148 HSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSEL 207
+SINGQLGR VNSVT+Q G KHLFVG DSTMS+GLRGPTNLFGHP DQLLTEIDSEL
Sbjct: 156 YSINGQLGRSGKVNSVTLQTGGRKHLFVGIDSTMSIGLRGPTNLFGHPTDQLLTEIDSEL 215
Query: 208 SQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKR 267
SQWNSQS +PVTKI+FGHFP+SFSA S S +SL+DIFLKHSLSAYLCGHLHTRFGKNLKR
Sbjct: 216 SQWNSQSVEPVTKISFGHFPLSFSALSSSEKSLKDIFLKHSLSAYLCGHLHTRFGKNLKR 275
Query: 268 HHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGA-PSIGEFWEWEMGDWRKSRAMRILAID 326
HH + H+ FFQ N+H PL S KNCSS A P + EFWEWEMGDWRKSRAMR++AID
Sbjct: 276 HHQLGHH-----FFQPNIHPTPLESAKNCSSMAVPPVEEFWEWEMGDWRKSRAMRMVAID 330
Query: 327 RGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRSSS-QKYECEHMVAQSYATIRALVFSV 385
G +S++DIDFKSG +K I++PTFPLDSR MS SSS YEC + SY T+RALVFSV
Sbjct: 331 SGFVSFLDIDFKSGAKKIIILPTFPLDSRLMSTSSSLHNYECHSIDPSSYETVRALVFSV 390
Query: 386 SPILSVVAKVYDSRSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEI 445
SPI+SVV ++YDS G ++VME M K DNSSRGDLY A WN++AFED SP R+WL+I
Sbjct: 391 SPIISVVVRIYDSEPGNLNMVMEAPMSKHDDNSSRGDLYTALWNFKAFEDPSPVRYWLQI 450
Query: 446 EVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILI 505
E DIMGR S +ELRPFSINGL K+SWTW EF VMGCQW +LYYP+LW ++F+FSILI
Sbjct: 451 EAIDIMGRSSLTELRPFSINGLRGKLSWTWTEFIVMGCQWASLYYPILWTCLFFIFSILI 510
Query: 506 VPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPWFVG 565
VPK LL +K Y+YK+F AN+GFI+ IAW+L ELC++ VVW+G+LGYLFYL+LFPWF G
Sbjct: 511 VPKVLLTFTKGPYSYKSFCANKGFISGIAWILVELCRLSVVWFGMLGYLFYLILFPWFSG 570
Query: 566 QVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAALAA 625
QVFTDG YMTY GWVV+ + ++IGSPD+MV+VL H+ FVVLP+ILV+AALAA
Sbjct: 571 QVFTDGGERKYMTYKGWVVKIFGESKKLEFIGSPDIMVVVLSHLCFVVLPSILVAAALAA 630
Query: 626 EKELYRV---SLSGKKEDDHEQEN 646
EK YRV S SGKKEDD+ EN
Sbjct: 631 EKGGYRVEFLSRSGKKEDDYGSEN 654
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507853|ref|XP_003624215.1| Transmembrane protein [Medicago truncatula] gi|355499230|gb|AES80433.1| Transmembrane protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/646 (65%), Positives = 516/646 (79%), Gaps = 9/646 (1%)
Query: 10 LFITTPISHAETTEKADGRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPA 69
LFI T I A +G VI+ + P+ +W VQLSDLH SVHHP+RA DF +VG A
Sbjct: 22 LFIAT-IVIAFRIYCCNGETVIEPKGTPDSAVWVVQLSDLHLSVHHPNRALDFTNLVGHA 80
Query: 70 LSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGN 129
LS I+PSLVLITGDLTDGKSKDLLTMKQNE EW+EY+NVM VI+RSGL KS+F+D+RGN
Sbjct: 81 LSFINPSLVLITGDLTDGKSKDLLTMKQNEDEWVEYRNVMDGVIERSGLHKSLFFDLRGN 140
Query: 130 HDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVG--LRG 187
HD+FGVP+VGGSFDFFSK+S+NGQLGR ++VNSVT++ + KHLFVG D+TMS G LRG
Sbjct: 141 HDSFGVPVVGGSFDFFSKYSVNGQLGRNRSVNSVTLETKERKHLFVGIDTTMSAGAGLRG 200
Query: 188 PTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKH 247
PTN+FGHP DQLL ++D ELS W+SQS KPVTKI+FGHFP+SFSA S SGR+L+++FLKH
Sbjct: 201 PTNVFGHPTDQLLKDLDLELSHWDSQSEKPVTKISFGHFPLSFSAPSSSGRTLKEVFLKH 260
Query: 248 SLSAYLCGHLHTRFGKNLKRHHYMDHNFLS-QKFFQSNMHQIPLGSTKNCSSGAPSIGEF 306
S+SAYLCGHLH+RFGKNLKRHH + + FLS Q FFQ N+HQ ST NCS GAP EF
Sbjct: 261 SISAYLCGHLHSRFGKNLKRHHQLSNRFLSLQNFFQFNVHQNSFESTVNCSIGAPP-QEF 319
Query: 307 WEWEMGDWRKSRAMRILAIDRGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRSS-SQKY 365
WEWE+GDWRKSRA+RILAIDRGH+SYVD+DFKSG + I++PTFPLDSRFM SS Y
Sbjct: 320 WEWEIGDWRKSRAIRILAIDRGHVSYVDLDFKSGAKHAIILPTFPLDSRFMQTSSWHHNY 379
Query: 366 ECEHMVAQSYATIRALVFSVSPILSVVAKVYDSRSGKHDLVMEELMRKRTDNSSRGDLYA 425
EC+ + + SY TIRALVFS SP+ SVVA+VYDSR G LV+E M KR D +SRG+LY
Sbjct: 380 ECQSVASSSYETIRALVFSASPVESVVARVYDSRYGDLVLVVEAHMTKRADENSRGNLYV 439
Query: 426 APWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQW 485
APWNY+AFED+SP RFW +IE DIMGR + +ELRPFSING S ++SW+WKEFFVMGCQW
Sbjct: 440 APWNYKAFEDTSPDRFWFQIESNDIMGRSTLTELRPFSINGHSFRLSWSWKEFFVMGCQW 499
Query: 486 DTLYYPLLWFAMYFLFSILIVPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHV 545
+LYYPLLW A+ F+FS L+VPKALL YTY+NF AN+G +N W+LQELC++
Sbjct: 500 ASLYYPLLWSALGFMFSFLLVPKALLFFQMNLYTYRNFIANKGVVNGALWILQELCRVPT 559
Query: 546 VWYGILGYLFYLVLFPWFVGQVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIV 605
+W+G +GYLFYL+LFPWF+GQVFT+G+S YMTYMGW V + + +++G PD+MV+V
Sbjct: 560 LWFGWIGYLFYLILFPWFMGQVFTEGKSTVYMTYMGWAVETSNGKGKFEWVGFPDIMVLV 619
Query: 606 LPHIVFVVLPAILVSAALAAEKELYR---VSLSGKKEDDHEQENGR 648
LPHI+FVVLPAILV+ AL AE+ +YR ++LSGKK+DD + + R
Sbjct: 620 LPHILFVVLPAILVTGALTAERAIYRERVLALSGKKKDDIDLNSRR 665
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356566957|ref|XP_003551691.1| PREDICTED: putative metallophosphoesterase At3g03305-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/635 (66%), Positives = 511/635 (80%), Gaps = 10/635 (1%)
Query: 12 ITTPISHAETTEKADGRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALS 71
I I AE+ E V +R GP+ V+W VQLSDLHFSVHHP+RA DF +VGPALS
Sbjct: 33 ILCGICAAESNEG-----VTHVRGGPDSVVWVVQLSDLHFSVHHPNRALDFANLVGPALS 87
Query: 72 MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHD 131
+I+PSLVLITGDLTDGKSKDLLTMKQNE EW+EY+ V+ VIKRS L+KS+F+D+RGNHD
Sbjct: 88 VINPSLVLITGDLTDGKSKDLLTMKQNEDEWVEYRTVLDTVIKRSRLQKSLFFDLRGNHD 147
Query: 132 NFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNL 191
+FGVP+VG SFDFFSK+SINGQLGR +VNSVT++ D KHLFVGFDSTM GLRGPTNL
Sbjct: 148 SFGVPVVGASFDFFSKYSINGQLGRNGSVNSVTLETRDWKHLFVGFDSTMLTGLRGPTNL 207
Query: 192 FGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSA 251
FGHP DQLL ++D ELSQW+SQS K VTKI+FGHFP+SFSA S SGR+L+D+FLKHS+SA
Sbjct: 208 FGHPTDQLLKDLDLELSQWDSQSEKLVTKISFGHFPLSFSAPSSSGRTLEDVFLKHSISA 267
Query: 252 YLCGHLHTRFGKNLKRHHYM-DHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWE 310
YLCGHLHT+FG NLKRHH + DH+ QK FQ N+HQ ST NCS GAP I EFWEWE
Sbjct: 268 YLCGHLHTKFGMNLKRHHQLDDHSSSLQKLFQFNIHQSSFESTANCSMGAPPIQEFWEWE 327
Query: 311 MGDWRKSRAMRILAIDRGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRSSSQ-KYECEH 369
MGDWRKSRA RILAIDRGH+SYVD DFKSG ++ I++PTFPLDSRFM SS + YEC+
Sbjct: 328 MGDWRKSRAFRILAIDRGHVSYVDTDFKSGTKRAIILPTFPLDSRFMLTSSCRHNYECQS 387
Query: 370 MVAQSYATIRALVFSVSPILSVVAKVYDSRSGKHDLVMEELMRKRTDNSSRGDLYAAPWN 429
+ SY TIRALVFS+SPI+SVVA+VYDSRSG DLV+E M K + ++SRG+LY APWN
Sbjct: 388 VAPSSYETIRALVFSLSPIVSVVARVYDSRSGNLDLVLETQMIKHSGDNSRGNLYVAPWN 447
Query: 430 YRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLY 489
YRAFED+SP RFWL+IE DI GR + +ELRPFSING S K+SW WKEF VMGCQW +LY
Sbjct: 448 YRAFEDASPDRFWLQIEANDIAGRSTLTELRPFSINGHSLKLSWGWKEFLVMGCQWASLY 507
Query: 490 YPLLWFAMYFLFSILIVPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYG 549
YPL W A+YFLF L++PKALL+ KK YTYKNF AN+G +N + W LQELC++ +W+G
Sbjct: 508 YPLFWSALYFLFIFLLLPKALLVFPKKIYTYKNFIANKGIVNGVLWFLQELCRIPTLWFG 567
Query: 550 ILGYLFYLVLFPWFVGQVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIVLPHI 609
+GYLFYL+L PWF+GQVFT+G++ YMTYMGW + + + +Y+GSPD+MV+VLPH+
Sbjct: 568 WIGYLFYLMLCPWFMGQVFTEGKNMVYMTYMGWAIETSNGKGKVEYVGSPDIMVVVLPHL 627
Query: 610 VFVVLPAILVSAALAAEKELYR---VSLSGKKEDD 641
+FVVLPAILV+ AL AE+ +YR ++ KK+DD
Sbjct: 628 LFVVLPAILVTGALTAERAIYREHMLAFLVKKKDD 662
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|298205055|emb|CBI38351.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/624 (67%), Positives = 485/624 (77%), Gaps = 42/624 (6%)
Query: 28 RRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDG 87
RRVI + GPE +IW VQLSDLHFS HHPDRA DF+ +VGPALSMI+PSLVLITGDLTDG
Sbjct: 36 RRVIDAKGGPESLIWVVQLSDLHFSAHHPDRALDFRALVGPALSMINPSLVLITGDLTDG 95
Query: 88 KSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK 147
KSKDLL MKQ+E EW EYQ VM+DV+K SGL+K+IFYD+RGNHDNFGVP+VGGSFDFFSK
Sbjct: 96 KSKDLLIMKQDEEEWKEYQKVMEDVVKWSGLDKNIFYDLRGNHDNFGVPVVGGSFDFFSK 155
Query: 148 HSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSEL 207
+SINGQLGR VNSVT+Q G KHLFVG DSTMS+GLRGPTNLFGHP DQLLTEIDSEL
Sbjct: 156 YSINGQLGRSGKVNSVTLQTGGRKHLFVGIDSTMSIGLRGPTNLFGHPTDQLLTEIDSEL 215
Query: 208 SQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKR 267
SQWNSQS +PVTKI+FGHFP+SFSA S S +SL+DIFLKHSLSAYLCGHLHTRFGKNLKR
Sbjct: 216 SQWNSQSVEPVTKISFGHFPLSFSALSSSEKSLKDIFLKHSLSAYLCGHLHTRFGKNLKR 275
Query: 268 HHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGA-PSIGEFWEWEMGDWRKSRAMRILAID 326
HH + H+ FFQ N+H PL S KNCSS A P + EFWEWEMGDWRKSRAMR++AID
Sbjct: 276 HHQLGHH-----FFQPNIHPTPLESAKNCSSMAVPPVEEFWEWEMGDWRKSRAMRMVAID 330
Query: 327 RGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRSSS-QKYECEHMVAQSYATIRALVFSV 385
G +S++DIDFKSG +K I++PTFPLDSR MS SSS YEC + SY T+RALVFSV
Sbjct: 331 SGFVSFLDIDFKSGAKKIIILPTFPLDSRLMSTSSSLHNYECHSIDPSSYETVRALVFSV 390
Query: 386 SPILSVVAKVYDSRSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEI 445
SPI+SVV ++YDS G ++VME M K DNSSRGDLY A WN++AFED SP R+WL+I
Sbjct: 391 SPIISVVVRIYDSEPGNLNMVMEAPMSKHDDNSSRGDLYTALWNFKAFEDPSPVRYWLQI 450
Query: 446 EVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILI 505
E DIMGR S +ELRPFSINGL K+SWTW EF VMGCQW +LYYP+LW
Sbjct: 451 EAIDIMGRSSLTELRPFSINGLRGKLSWTWTEFIVMGCQWASLYYPILWTC--------- 501
Query: 506 VPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPWFVG 565
FI+ IAW+L ELC++ VVW+G+LGYLFYL+LFPWF G
Sbjct: 502 -----------------------FISGIAWILVELCRLSVVWFGMLGYLFYLILFPWFSG 538
Query: 566 QVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAALAA 625
QVFTDG YMTY GWVV+ + ++IGSPD+MV+VL H+ FVVLP+ILV+AALAA
Sbjct: 539 QVFTDGGERKYMTYKGWVVKIFGESKKLEFIGSPDIMVVVLSHLCFVVLPSILVAAALAA 598
Query: 626 EKELYRV---SLSGKKEDDHEQEN 646
EK YRV S SGKKEDD+ EN
Sbjct: 599 EKGGYRVEFLSRSGKKEDDYGSEN 622
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297832974|ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp. lyrata] gi|297330209|gb|EFH60628.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/625 (65%), Positives = 499/625 (79%), Gaps = 8/625 (1%)
Query: 27 GRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTD 86
GRRVI+ R G + +IW VQLSDLHFSVHHP+RA DFK IVGPALS+I+PSLVLITGDLTD
Sbjct: 48 GRRVIEARTG-QDLIWVVQLSDLHFSVHHPERAIDFKNIVGPALSLINPSLVLITGDLTD 106
Query: 87 GKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFS 146
GKSKD+LTMK NE EW+EY++VMQDV+K SGL KSIFYD+RGNHDNFGVP VG S DFFS
Sbjct: 107 GKSKDMLTMKLNEDEWLEYESVMQDVVKTSGLNKSIFYDLRGNHDNFGVPAVGSSVDFFS 166
Query: 147 KHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSE 206
K+SIN Q+GRK NVN++TV+ + KHLFVG D+TM +GLRGPTNLFGHP D+LL+ +DS
Sbjct: 167 KYSINAQMGRKGNVNTITVETSERKHLFVGIDTTMHIGLRGPTNLFGHPTDELLSSLDSH 226
Query: 207 LSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLK 266
LSQW++QS KPV KI+FGHFP+SF+A SHS +SL+D+FLKHS+SAYLCGHLH++FGKNLK
Sbjct: 227 LSQWDNQSAKPVAKISFGHFPLSFTALSHSQKSLKDVFLKHSISAYLCGHLHSKFGKNLK 286
Query: 267 RHHYMDHNFLSQK-FFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAI 325
RHH+ LS FQ NM Q ST NCS GA EFWEWEM DWRK+RAMRI+AI
Sbjct: 287 RHHHSGGISLSDNDLFQLNMRQSGAESTSNCSFGALPAAEFWEWEMADWRKNRAMRIMAI 346
Query: 326 DRGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRS-SSQKYECEHMVAQSYATIRALVFS 384
DRGH+SYVD+DFKS +TI++PTFPLDSRFMS S + KYEC+HM++ SY TIRA+VFS
Sbjct: 347 DRGHVSYVDLDFKSKSLRTIILPTFPLDSRFMSTSFARHKYECQHMISSSYDTIRAIVFS 406
Query: 385 VSPILSVVAKVYDSRSGKHDLVMEELMRKR-TDNSSRG-DLYAAPWNYRAFEDSSPQRFW 442
S I+ VVA+VYDS G +LVME MRK D+SS G ++ PWNYRAFED P RFW
Sbjct: 407 HSLIVEVVARVYDSSPGFDNLVMEAPMRKLGGDSSSSGATFFSLPWNYRAFEDPLPDRFW 466
Query: 443 LEIEVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFS 502
L+IEVTDI GRL+ SE+RPFSINGLS+K+SWTW EF VMGCQW LYYP+LW AMY LF
Sbjct: 467 LQIEVTDIKGRLTLSEMRPFSINGLSSKVSWTWNEFRVMGCQWAALYYPILWAAMYSLFL 526
Query: 503 ILIVPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPW 562
+ ++PK ++I+ KKQYT K F A RG I + W+LQ+LC+M VVW+G + YL YL+ FPW
Sbjct: 527 VFLIPKCIIIVFKKQYTLKKFIAKRGPITLVLWILQDLCRMPVVWFGYMAYLLYLIFFPW 586
Query: 563 FVGQVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAA 622
F G+V+TD + YMT MGWVV + H+YIG PDVMV+V+PH+VFVV+P++LV
Sbjct: 587 FSGEVYTDSGNRTYMTIMGWVVTSSGADRKHEYIGQPDVMVLVIPHVVFVVIPSVLVVCC 646
Query: 623 LAAEKELYR---VSLSGKKEDDHEQ 644
L AE+E+Y+ ++SGKKEDDH++
Sbjct: 647 LVAEREIYKDHIRTVSGKKEDDHDR 671
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6714410|gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/625 (65%), Positives = 501/625 (80%), Gaps = 8/625 (1%)
Query: 27 GRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTD 86
GRRVI+ R G + +IW VQLSDLHFSVHHP+RA DFK IVGPAL++I+PSLVLITGDLTD
Sbjct: 46 GRRVIEARTG-QDLIWVVQLSDLHFSVHHPERAIDFKNIVGPALALINPSLVLITGDLTD 104
Query: 87 GKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFS 146
GKSKD+LTMK NE EW+EY++VMQDV+KRSGL KSIFYD+RGNHDNFGVP VG S DFFS
Sbjct: 105 GKSKDMLTMKLNEDEWLEYESVMQDVVKRSGLNKSIFYDLRGNHDNFGVPSVGSSVDFFS 164
Query: 147 KHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSE 206
K+SINGQ+GRK NVN++TV+ + KHLFVG D+TM +GLRGPTNLFGHP D+LL+ +DS
Sbjct: 165 KYSINGQMGRKGNVNTITVETSERKHLFVGIDTTMHIGLRGPTNLFGHPTDELLSSLDSH 224
Query: 207 LSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLK 266
LSQW++QS KPV KI+FGHFP+SF+A SHS +SL+D+FLKHS+SAYLCGHLH+RFGKNLK
Sbjct: 225 LSQWDNQSAKPVAKISFGHFPLSFTALSHSQKSLKDVFLKHSISAYLCGHLHSRFGKNLK 284
Query: 267 RHHYMDHNFLSQK-FFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAI 325
RHH+ LS FQ NM Q ST NCS GA EFWEWEMGDWRK+RAMRI+AI
Sbjct: 285 RHHHSGGISLSDNDLFQLNMRQSGAESTSNCSFGALPAAEFWEWEMGDWRKNRAMRIMAI 344
Query: 326 DRGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRS-SSQKYECEHMVAQSYATIRALVFS 384
DRGH+SYVD+DFKS +KTI++PTFPLDSRFMS S + KYEC+HM++ SY IRA+VFS
Sbjct: 345 DRGHVSYVDLDFKSKPQKTIILPTFPLDSRFMSTSFARHKYECQHMISSSYDAIRAIVFS 404
Query: 385 VSPILSVVAKVYDSRSGKHDLVMEELMRKR-TDNSSRG-DLYAAPWNYRAFEDSSPQRFW 442
S ++ VVA+VYDS G +LVME MRK D+SS G ++ PWNYRAFED P RFW
Sbjct: 405 HSLVVEVVARVYDSSPGFDNLVMEAPMRKHGGDSSSSGATFFSLPWNYRAFEDPLPDRFW 464
Query: 443 LEIEVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFS 502
L+IEVTDI GRL+ SE+RPFSINGLS+K+SWTW EF VMGCQW LYYP+LW A+Y LF
Sbjct: 465 LQIEVTDIKGRLTLSEMRPFSINGLSSKVSWTWNEFRVMGCQWAALYYPILWPALYSLFL 524
Query: 503 ILIVPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPW 562
+ ++PK ++I+ KKQYT K F A +G I + W+LQ+LC+M VVW+G + YLFYL+ FPW
Sbjct: 525 VFLIPKCIIIVFKKQYTLKKFIAKKGPITLVLWILQDLCRMPVVWFGYMAYLFYLIFFPW 584
Query: 563 FVGQVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAA 622
F G+VF D YMT MGWVV + H+YIG PDVMV+V+PH+VFVV+P++LV
Sbjct: 585 FSGEVFADSGDRAYMTIMGWVVTSSGADRKHEYIGQPDVMVVVIPHVVFVVIPSVLVVCC 644
Query: 623 LAAEKELYR---VSLSGKKEDDHEQ 644
L AE+E+Y+ ++SGKKEDDH++
Sbjct: 645 LVAEREIYKDHIRTVSGKKEDDHDR 669
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21618069|gb|AAM67119.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/625 (65%), Positives = 501/625 (80%), Gaps = 8/625 (1%)
Query: 27 GRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTD 86
GRRVI+ R G + +IW VQLSDLHFSVHHP+RA DFK IVGPAL++I+PSLVLITGDLTD
Sbjct: 46 GRRVIEARTG-QDLIWVVQLSDLHFSVHHPERAIDFKNIVGPALALINPSLVLITGDLTD 104
Query: 87 GKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFS 146
GKSKD+LTMK NE EW+EY++VMQDV+KRSGL KSIFYD+RGNHDNFGVP VG S DFFS
Sbjct: 105 GKSKDMLTMKLNEDEWLEYESVMQDVVKRSGLNKSIFYDLRGNHDNFGVPSVGSSVDFFS 164
Query: 147 KHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSE 206
K+SINGQ+GRK NVN++TV+ + KHLFVG D+TM +GLRGPTNLFGHP D+LL+ +DS
Sbjct: 165 KYSINGQMGRKGNVNTITVETSERKHLFVGIDTTMHIGLRGPTNLFGHPTDELLSSLDSH 224
Query: 207 LSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLK 266
LSQW++QS KPV KI+FGHFP+SF+A SHS +SL+D+FLKHS+SAYLCGHLH+RFGKNLK
Sbjct: 225 LSQWDNQSAKPVAKISFGHFPLSFTALSHSQKSLKDVFLKHSISAYLCGHLHSRFGKNLK 284
Query: 267 RHHYMDHNFLSQK-FFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAI 325
RHH+ LS FQ NM Q ST NCS GA EFWEWEMGDWRK+RAMRI+AI
Sbjct: 285 RHHHSGGISLSDNDLFQLNMRQSGAESTSNCSFGALPAAEFWEWEMGDWRKNRAMRIMAI 344
Query: 326 DRGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSRS-SSQKYECEHMVAQSYATIRALVFS 384
DRGH+SYVD+DFKS +KTI++PTFPLDSRFMS S + KYEC+HM++ SY IRA+VFS
Sbjct: 345 DRGHVSYVDLDFKSKPQKTIILPTFPLDSRFMSTSFARHKYECQHMISSSYDAIRAIVFS 404
Query: 385 VSPILSVVAKVYDSRSGKHDLVMEELMRKR-TDNSSRG-DLYAAPWNYRAFEDSSPQRFW 442
S ++ VVA+VYDS G +LVME MRK D+SS G ++ PWNYRAFED P RFW
Sbjct: 405 HSLVVEVVARVYDSSPGFDNLVMEAPMRKHGGDSSSSGATFFSLPWNYRAFEDPLPDRFW 464
Query: 443 LEIEVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFS 502
L+IEVTDI GRL+ SE+RPFSINGLS+K+SWTW EF VMGCQW LYYP+LW A+Y F
Sbjct: 465 LQIEVTDIKGRLTLSEMRPFSINGLSSKVSWTWSEFLVMGCQWAALYYPILWPALYSFFL 524
Query: 503 ILIVPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPW 562
+ ++PK ++I+ KKQYT K F A +G I + W+LQ+LC+M VVW+G + YLFYL+ FPW
Sbjct: 525 VFLIPKCIIIVFKKQYTLKKFIAKKGPITLVLWILQDLCRMPVVWFGYMAYLFYLIFFPW 584
Query: 563 FVGQVFTDGESWGYMTYMGWVVRALDNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAA 622
F G+VFTD YMT MGWVV + H+YIG PDVMV+V+PH+VFVV+P++LV
Sbjct: 585 FSGEVFTDSGDRAYMTIMGWVVTSSGADRKHEYIGQPDVMVVVIPHVVFVVIPSVLVVCC 644
Query: 623 LAAEKELYR---VSLSGKKEDDHEQ 644
L AE+E+Y+ ++SGKKEDDH++
Sbjct: 645 LVAEREIYKDHIRTVSGKKEDDHDR 669
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 649 | ||||||
| TAIR|locus:505006328 | 743 | AT3G03305 "AT3G03305" [Arabido | 0.989 | 0.864 | 0.639 | 3.9e-234 | |
| UNIPROTKB|Q0P6H9 | 643 | TMEM62 "Transmembrane protein | 0.325 | 0.328 | 0.362 | 6e-40 | |
| MGI|MGI:2139461 | 643 | Tmem62 "transmembrane protein | 0.322 | 0.325 | 0.346 | 1.3e-39 | |
| ZFIN|ZDB-GENE-040426-1837 | 639 | tmem62 "transmembrane protein | 0.322 | 0.327 | 0.356 | 1.5e-33 |
| TAIR|locus:505006328 AT3G03305 "AT3G03305" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2258 (799.9 bits), Expect = 3.9e-234, P = 3.9e-234
Identities = 416/651 (63%), Positives = 516/651 (79%)
Query: 1 MKYLVFLLLLFITTPISHAETTEKADGRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRAS 60
+ + + LLLL I+ + + +K+ GRRVI+ R G + +IW VQLSDLHFSVHHP+RA
Sbjct: 21 ISFTILLLLLLISLSTRVSGSLDKS-GRRVIEARTGQD-LIWVVQLSDLHFSVHHPERAI 78
Query: 61 DFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120
DFK IVGPAL++I+PSLVLITGDLTDGKSKD+LTMK NE EW+EY++VMQDV+KRSGL K
Sbjct: 79 DFKNIVGPALALINPSLVLITGDLTDGKSKDMLTMKLNEDEWLEYESVMQDVVKRSGLNK 138
Query: 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDST 180
SIFYD+RGNHDNFGVP VG S DFFSK+SINGQ+GRK NVN++TV+ + KHLFVG D+T
Sbjct: 139 SIFYDLRGNHDNFGVPSVGSSVDFFSKYSINGQMGRKGNVNTITVETSERKHLFVGIDTT 198
Query: 181 MSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSL 240
M +GLRGPTNLFGHP D+LL+ +DS LSQW++QS KPV KI+FGHFP+SF+A SHS +SL
Sbjct: 199 MHIGLRGPTNLFGHPTDELLSSLDSHLSQWDNQSAKPVAKISFGHFPLSFTALSHSQKSL 258
Query: 241 QDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFLSQK-FFQSNMHQIPLGSTKNCSSG 299
+D+FLKHS+SAYLCGHLH+RFGKNLKRHH+ LS FQ NM Q ST NCS G
Sbjct: 259 KDVFLKHSISAYLCGHLHSRFGKNLKRHHHSGGISLSDNDLFQLNMRQSGAESTSNCSFG 318
Query: 300 APSIGEFWEWEMGDWRKSRAMRILAIDRGHISYVDIDFKSGFRKTIVVPTFPLDSRFMSR 359
A EFWEWEMGDWRK+RAMRI+AIDRGH+SYVD+DFKS +KTI++PTFPLDSRFMS
Sbjct: 319 ALPAAEFWEWEMGDWRKNRAMRIMAIDRGHVSYVDLDFKSKPQKTIILPTFPLDSRFMST 378
Query: 360 SSSQ-KYECEHMVAQSYATIRALVFSVSPILSVVAKVYDSRSGKHDLVMEELMRKRT-DN 417
S ++ KYEC+HM++ SY IRA+VFS S ++ VVA+VYDS G +LVME MRK D+
Sbjct: 379 SFARHKYECQHMISSSYDAIRAIVFSHSLVVEVVARVYDSSPGFDNLVMEAPMRKHGGDS 438
Query: 418 SSRG-DLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLSAKISWTWK 476
SS G ++ PWNYRAFED P RFWL+IEVTDI GRL+ SE+RPFSINGLS+K+SWTW
Sbjct: 439 SSSGATFFSLPWNYRAFEDPLPDRFWLQIEVTDIKGRLTLSEMRPFSINGLSSKVSWTWN 498
Query: 477 EFFVMGCQWDTLYYPLLWFAMYFLFSILIVPKALLILSKKQYTYKNFAANRGFINCIAWV 536
EF VMGCQW LYYP+LW A+Y LF + ++PK ++I+ KKQYT K F A +G I + W+
Sbjct: 499 EFRVMGCQWAALYYPILWPALYSLFLVFLIPKCIIIVFKKQYTLKKFIAKKGPITLVLWI 558
Query: 537 LQELCKMHVVWYGILGYLFYLVLFPWFVGQVFTDGESWGYMTYMGWVVRALDNQESHKYI 596
LQ+LC+M VVW+G + YLFYL+ FPWF G+VF D YMT MGWVV + H+YI
Sbjct: 559 LQDLCRMPVVWFGYMAYLFYLIFFPWFSGEVFADSGDRAYMTIMGWVVTSSGADRKHEYI 618
Query: 597 GSPDVMVIVLPHIVFVVLPAILVSAALAAEKELYRV---SLSGKKEDDHEQ 644
G PDVMV+V+PH+VFVV+P++LV L AE+E+Y+ ++SGKKEDDH++
Sbjct: 619 GQPDVMVVVIPHVVFVVIPSVLVVCCLVAEREIYKDHIRTVSGKKEDDHDR 669
|
|
| UNIPROTKB|Q0P6H9 TMEM62 "Transmembrane protein 62" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 326 (119.8 bits), Expect = 6.0e-40, Sum P(3) = 6.0e-40
Identities = 83/229 (36%), Positives = 124/229 (54%)
Query: 36 GPEHVIWAVQLSDLHFS-VHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLT 94
G ++ W +Q+SD+H S P RA D ++ + +I P+LVL TGDLTD K+K+ L
Sbjct: 51 GDSNIFWGLQISDIHLSRFRDPGRAVDLEKFCSETIDIIQPALVLATGDLTDAKTKEQLG 110
Query: 95 MKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQL 154
+Q+EVEW YQ +++ K +EK+ + DI+GNHD F +P + +++ K+S +
Sbjct: 111 SRQHEVEWQTYQGILK---KTRVMEKTKWLDIKGNHDAFNIPSLDSIKNYYRKYSAVRRD 167
Query: 155 GRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQS 214
G V+S G+ + F+ D+T++ G + P N FG D+ E EL +S
Sbjct: 168 GSFHYVHSTP--FGN--YSFICVDATVNPGPKRPYNFFGI-LDKKKME---ELLLLAKES 219
Query: 215 TKPVTKITFGHFPVSFSASSHSG-RSLQDIFLKHSLSAYLCGHLHTRFG 262
++ I FGHF S S G RS+ S AYLCGHLHT G
Sbjct: 220 SRSNHTIWFGHFTTSTILSPSPGIRSIMS-----SAIAYLCGHLHTLGG 263
|
|
| MGI|MGI:2139461 Tmem62 "transmembrane protein 62" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 324 (119.1 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 78/225 (34%), Positives = 126/225 (56%)
Query: 39 HVIWAVQLSDLHFS-VHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQ 97
++ W +Q+SD+H S P RA ++ + +I P+LVL TGDLTD K+K+ L +Q
Sbjct: 54 NIFWGLQISDIHLSRFQDPGRALALEKFCSETIDIIQPALVLATGDLTDAKTKEHLGSRQ 113
Query: 98 NEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRK 157
+EVEW YQ +++ K +EK+ + DI+GNHD + +P + +++ K+S + G
Sbjct: 114 HEVEWQTYQRILK---KTRVMEKTKWLDIKGNHDAYNIPSLESIANYYRKYSAVRKDGAF 170
Query: 158 QNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKP 217
+++S G+ + F+ D+T G + P N FG ++ + E+ E S+ +SQS +
Sbjct: 171 HHIHSTP--FGN--YSFISVDATQRPGPKRPYNFFGILDEKQMEEL-VEFSKKSSQSNQT 225
Query: 218 VTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262
I FGHF S S G ++ + S +AYLCGHLHT G
Sbjct: 226 ---IWFGHFTTSTIMSPSPG--IRTVM--GSATAYLCGHLHTLGG 263
|
|
| ZFIN|ZDB-GENE-040426-1837 tmem62 "transmembrane protein 62" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 315 (115.9 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 81/227 (35%), Positives = 124/227 (54%)
Query: 38 EHVIWAVQLSDLHFS-VHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMK 96
+++ W VQ+SD+H S H P R DF++ + +I P LVL TGDLTD K++ +
Sbjct: 54 DNIFWFVQVSDIHISRFHDPRRIPDFEKFCTDTIDVIKPDLVLATGDLTDAKTESKMGSL 113
Query: 97 QNEVEWMEYQNVMQDVIKRSG-LEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLG 155
Q+EVEW Y NV+ KRS LE++ + DIRGNHD F + + +++ K+S N ++G
Sbjct: 114 QHEVEWQAYHNVL----KRSRVLERTKWIDIRGNHDAFNIVSLESVNNYYRKYSANQKVG 169
Query: 156 RKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQST 215
V+ G+ + F+ D+T+ G + P N FG D+ +++D L + +S
Sbjct: 170 SFHYVHRTP--FGN--YSFICADATLVPGPKRPYNFFGI-IDE--SQMDM-LETFREESL 221
Query: 216 KPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262
I FGH+ S S G +++ L + AYLCGHLHT G
Sbjct: 222 SSNKSIWFGHYTTSTVISPSPG--IRE--LMSTAVAYLCGHLHTLGG 264
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q0WVZ1 | Y3330_ARATH | 3, ., 1, ., -, ., - | 0.656 | 0.9506 | 0.8304 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.VIII.2099.1 | hypothetical protein (704 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 649 | |||
| cd07401 | 256 | cd07401, MPP_TMEM62_N, Homo sapiens TMEM62, N-term | 2e-38 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 4e-06 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 8e-04 | |
| COG1408 | 284 | COG1408, COG1408, Predicted phosphohydrolases [Gen | 0.002 | |
| cd07385 | 223 | cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and re | 0.004 |
| >gnl|CDD|163644 cd07401, MPP_TMEM62_N, Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-38
Identities = 78/235 (33%), Positives = 122/235 (51%), Gaps = 15/235 (6%)
Query: 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVE 101
W V +SD+H S HP + + + +I P+LVL TGDLTD K+ + L Q + E
Sbjct: 1 WFVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEE 60
Query: 102 WMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN 161
W +Y N+ + + S + K ++DIRGNHD F +P + +++ K+S G +
Sbjct: 61 WQKYYNI---LKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATG----RDGSF 113
Query: 162 SVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKI 221
S + + F+G D T+ G + P N FG +LL ++ EL + S ++ I
Sbjct: 114 SFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELEK--STNSN--YTI 169
Query: 222 TFGHFPVS--FSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHN 274
FGH+P S S S+ S +D+ K++++AYLCGHLH L+ HY H
Sbjct: 170 WFGHYPTSTIISPSAKSSSKFKDLLKKYNVTAYLCGHLHPL--GGLEPVHYAGHP 222
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 256 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 4e-06
Identities = 39/221 (17%), Positives = 63/221 (28%), Gaps = 46/221 (20%)
Query: 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWM 103
+ + DLH + D ++G P LVL GDL D L + +
Sbjct: 3 LVIGDLHGGLDDLDLLLLLLELLGE----PKPDLVLFLGDLVDRGPPSLEVLALLFALKL 58
Query: 104 EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSV 163
+ + +RGNHD G + +
Sbjct: 59 KAPG--PVYL------------VRGNHDFDSGNSELGFYLECAGL--------------- 89
Query: 164 TVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITF 223
+ V + +GL G + E+ L + KI
Sbjct: 90 ---PYVLGNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLL----LLAALVDGKILL 142
Query: 224 GHFPVSFSASSHSGR------SLQDIFLKHSLSAYLCGHLH 258
H P+S S S +L+D+ + + L GH H
Sbjct: 143 VHGPLSPSLDSGDDIYLFGEEALEDLLKDNGVDLVLRGHTH 183
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 8e-04
Identities = 45/230 (19%), Positives = 83/230 (36%), Gaps = 55/230 (23%)
Query: 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWM 103
+SDLH D + ++ A+ + P L+++TGDLT+ +
Sbjct: 4 AHISDLHLGALGVDSEELLEALL-AAIEQLKPDLLVVTGDLTNDGEPE------------ 50
Query: 104 EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSV 163
EY+ +++++ R L + + GNHD V + + FS N +V
Sbjct: 51 EYRR-LKELLARLELPAPVIV-VPGNHDARVV-----NGEAFSDQ--------FFNRYAV 95
Query: 164 TVQIGDEKHL-FVGFDSTMSVGLRGPTNLFGHP-----ADQLLTEIDSELSQWNSQSTKP 217
V +G DS ++ G P A+QL ++ L+ ++
Sbjct: 96 LVGACSSGGWRVIGLDS----------SVPGVPLGRLGAEQLD-WLEEALAAAPERAKD- 143
Query: 218 VTKITFGHFPVSFSASSHSGRSLQDIFLKHSL--------SAYLCGHLHT 259
T + H P+ + +L+D + L GH+H
Sbjct: 144 -TVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHL 192
|
Length = 301 |
| >gnl|CDD|224326 COG1408, COG1408, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 24/131 (18%), Positives = 37/131 (28%), Gaps = 32/131 (24%)
Query: 1 MKYLVFLLLLFITTPISHAETTEKADGRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRAS 60
L L + I + G ++ VQLSDLH
Sbjct: 18 AHLLEPGWLRVVKLTILTPKLPASLQGLKI-------------VQLSDLHSLPF-----R 59
Query: 61 DFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120
+ K + A++ P L+++TGD DG
Sbjct: 60 EEKLALLIAIANELPDLIVLTGDYVDG------DRPPGVAALAL--------FLAKLKAP 105
Query: 121 SIFYDIRGNHD 131
+ + GNHD
Sbjct: 106 LGVFAVLGNHD 116
|
Length = 284 |
| >gnl|CDD|163628 cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 39/216 (18%), Positives = 67/216 (31%), Gaps = 57/216 (26%)
Query: 44 VQLSDLHF-SVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEW 102
LSDLH +R + ++ P LV++TGDL DG L
Sbjct: 5 AHLSDLHLGPFVSRERLERLVEKI---NAL-KPDLVVLTGDLVDGSVDVL---------- 50
Query: 103 MEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNS 162
++ +++K+ ++ + GNHD + + I
Sbjct: 51 ----ELLLELLKKLKAPLGVYA-VLGNHD-YYSGDEENWIEALESAGI------------ 92
Query: 163 VTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKIT 222
TV + + VG + G+ ++ L +D + I
Sbjct: 93 -TVLRNESVEISVGGATIGIAGVDDGLGR-RPDLEKALKGLDEDD-----------PNIL 139
Query: 223 FGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLH 258
H P + ++ G LQ L GH H
Sbjct: 140 LAHQPDTAEEAAAWGVDLQ-----------LSGHTH 164
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 223 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 649 | |||
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.98 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.92 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.9 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.87 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.86 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.86 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.81 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.81 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.81 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.78 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.77 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.73 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.73 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 99.73 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.71 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.71 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.7 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.69 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.65 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.64 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.62 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.62 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.6 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.58 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.57 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.54 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.54 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.52 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.52 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.5 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 99.4 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.36 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.33 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.31 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.29 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 99.21 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.21 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.18 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.17 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.15 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.11 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.1 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.1 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 99.1 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.08 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.04 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 99.03 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.98 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.98 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.92 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.88 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.87 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 98.86 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.85 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.78 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.67 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.65 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.58 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.56 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.55 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.39 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.36 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.29 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.28 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.23 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.21 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.21 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.17 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.14 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 98.07 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.06 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.03 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 97.99 | |
| PHA02239 | 235 | putative protein phosphatase | 97.96 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 97.95 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 97.91 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.9 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.9 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.88 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 97.8 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.68 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.66 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.65 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.64 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.64 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.45 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.44 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.42 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.4 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.37 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.33 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.33 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.31 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.31 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.3 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.28 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.26 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.16 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.11 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.04 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 97.02 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.85 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 96.76 | |
| KOG0701 | 1606 | consensus dsRNA-specific nuclease Dicer and relate | 96.21 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.16 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.08 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 95.9 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 95.71 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.71 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.49 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 95.4 | |
| PF03404 | 131 | Mo-co_dimer: Mo-co oxidoreductase dimerisation dom | 95.38 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.22 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 95.09 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 95.02 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 94.86 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 94.76 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 94.55 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 94.42 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 94.37 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 94.26 | |
| cd02114 | 367 | bact_SorA_Moco sulfite:cytochrome c oxidoreductase | 93.34 | |
| cd02110 | 317 | SO_family_Moco_dimer Subgroup of sulfite oxidase ( | 93.2 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 93.01 | |
| cd02112 | 386 | eukary_NR_Moco molybdopterin binding domain of euk | 92.78 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 91.38 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 91.25 | |
| PLN00177 | 393 | sulfite oxidase; Provisional | 90.63 | |
| cd02111 | 365 | eukary_SO_Moco molybdopterin binding domain of sul | 89.1 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 89.09 | |
| cd02113 | 326 | bact_SoxC_Moco bacterial SoxC is a member of the s | 89.08 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 88.57 | |
| PF13754 | 54 | Big_3_4: Bacterial Ig-like domain (group 3) | 88.35 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 86.97 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 84.53 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 83.47 | |
| PLN02252 | 888 | nitrate reductase [NADPH] | 81.98 |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-31 Score=272.81 Aligned_cols=210 Identities=35% Similarity=0.614 Sum_probs=155.8
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
+|+||||+|++...++......+.+.+.+++.+||+++++||++|..........|.+.+|+.|.+.+.+.. .+...
T Consensus 1 ~~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 77 (256)
T cd07401 1 WFVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESS---VINKE 77 (256)
T ss_pred CEEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhC---CCCcc
Confidence 589999999998875543333233446778899999999999999876544344566778877766665532 23457
Q ss_pred eEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHH
Q 006340 122 IFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLT 201 (649)
Q Consensus 122 p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~ 201 (649)
|++.++||||.++.++.++..++|++|+... ..... .+...+..++++||++|+...++.++|+.+.|.++++|++
T Consensus 78 p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~---~~~~~-~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 78 KWFDIRGNHDLFNIPSLDSENNYYRKYSATG---RDGSF-SFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred eEEEeCCCCCcCCCCCccchhhHHHHhheec---CCCcc-ceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 9999999999998877777778888886321 11111 2334343568999999999887777777788999999999
Q ss_pred HHHHHHhcccccCCCCceEEEEEecCCCccC--CCCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 202 EIDSELSQWNSQSTKPVTKITFGHFPVSFSA--SSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 202 wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~--~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
||+++|++.+ +.+++|+++|+|+.... ...+..++.+++++++++++||||+|..+.
T Consensus 154 wL~~~L~~~~----~~~~~IV~~HhP~~~~~~~~~~~~~~~~~ll~~~~v~~vl~GH~H~~~~ 212 (256)
T cd07401 154 RLEKELEKST----NSNYTIWFGHYPTSTIISPSAKSSSKFKDLLKKYNVTAYLCGHLHPLGG 212 (256)
T ss_pred HHHHHHHhcc----cCCeEEEEEcccchhccCCCcchhHHHHHHHHhcCCcEEEeCCccCCCc
Confidence 9999998754 23489999999985311 122334599999999999999999998873
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-24 Score=218.47 Aligned_cols=197 Identities=18% Similarity=0.240 Sum_probs=132.1
Q ss_pred CCceEEEEEcCCCCCCCC-C---------CcHHHHHHHHHHHHhcc--CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHH
Q 006340 38 EHVIWAVQLSDLHFSVHH-P---------DRASDFKRIVGPALSMI--SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEY 105 (649)
Q Consensus 38 ~~~~~fv~ISDlHls~~~-~---------~~~~~l~~~i~~~l~~~--kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y 105 (649)
++.++|+|+||+|++... . +....+++++ +.+++. +||+|+++|||++++..... .+.+|+.+
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~~~pd~ii~~GDl~~~~~~~~~----~~~~~~~~ 76 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAV-QAINKLNPKPKFVVVCGDLVNAMPGDEL----RERQVSDL 76 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHH-HHHHhcCCCCCEEEEeCCcCCCCcchhh----HHHHHHHH
Confidence 367999999999999532 1 1123467777 445555 99999999999998765321 12346666
Q ss_pred HHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCC
Q 006340 106 QNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGL 185 (649)
Q Consensus 106 ~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~ 185 (649)
++.++++. .++|++.++||||..+.+.. +.+.+|. ..++. . .+.+.. ++++||++|+.....+
T Consensus 77 ~~~~~~~~-----~~vp~~~i~GNHD~~~~~~~----~~~~~f~--~~~g~---~-~y~~~~--~~~~~i~lds~~~~~~ 139 (262)
T cd07395 77 KDVLSLLD-----PDIPLVCVCGNHDVGNTPTE----ESIKDYR--DVFGD---D-YFSFWV--GGVFFIVLNSQLFFDP 139 (262)
T ss_pred HHHHhhcc-----CCCcEEEeCCCCCCCCCCCh----hHHHHHH--HHhCC---c-ceEEEE--CCEEEEEeccccccCc
Confidence 66666542 24799999999998653221 2222221 11111 1 133443 4689999998764321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC----------CCchhHHHHHHHhCCceEEEeC
Q 006340 186 RGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS----------SHSGRSLQDIFLKHSLSAYLCG 255 (649)
Q Consensus 186 ~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~----------~~~~~~l~~ll~~~~v~l~L~G 255 (649)
. ..+.+..+|++||+++|++.++ .+.+++|+++|+|+..... .+++.++.+++++++|+++|||
T Consensus 140 ~----~~~~~~~~ql~WL~~~L~~~~~--~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~G 213 (262)
T cd07395 140 S----EVPELAQAQDVWLEEQLEIAKE--SDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSG 213 (262)
T ss_pred c----ccccchHHHHHHHHHHHHHHHh--ccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEEC
Confidence 1 2346789999999999998742 1335899999999863111 1245679999999999999999
Q ss_pred cccCCCC
Q 006340 256 HLHTRFG 262 (649)
Q Consensus 256 HtH~~~g 262 (649)
|+|....
T Consensus 214 H~H~~~~ 220 (262)
T cd07395 214 HYHRNAG 220 (262)
T ss_pred ccccCCc
Confidence 9998864
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=209.54 Aligned_cols=190 Identities=20% Similarity=0.335 Sum_probs=123.9
Q ss_pred EEeCCCCCCceEEEEEcCCCCCCCCC------CcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHH
Q 006340 31 IQLREGPEHVIWAVQLSDLHFSVHHP------DRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTMKQNEVEWM 103 (649)
Q Consensus 31 ~~~~~~p~~~~~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~ 103 (649)
+.+++..++.|+|+||||+|+..... +....|++++++..+ ..+||+||++|||++++..+
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~~------------ 72 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSSE------------ 72 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCHH------------
Confidence 34455555779999999999865321 224568888844333 24799999999999976531
Q ss_pred HHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCcc
Q 006340 104 EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSV 183 (649)
Q Consensus 104 ~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~p 183 (649)
.|+.+.+.+.+ + +.|+|.++||||... ...+++.+. ... . ...+ ..++++.||++|+...
T Consensus 73 ~~~~~~~~l~~---l-~~Pv~~v~GNHD~~~-----~~~~~~~~~----~~~---~--~~~~-~~~~~~~~i~Lds~~~- 132 (275)
T PRK11148 73 AYQHFAEGIAP---L-RKPCVWLPGNHDFQP-----AMYSALQDA----GIS---P--AKHV-LIGEHWQILLLDSQVF- 132 (275)
T ss_pred HHHHHHHHHhh---c-CCcEEEeCCCCCChH-----HHHHHHhhc----CCC---c--cceE-EecCCEEEEEecCCCC-
Confidence 24455555543 3 369999999999842 111222111 011 0 1111 2234688999998753
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCcc------CCCCchhHHHHHHHhC-CceEEEeCc
Q 006340 184 GLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFS------ASSHSGRSLQDIFLKH-SLSAYLCGH 256 (649)
Q Consensus 184 G~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~------~~~~~~~~l~~ll~~~-~v~l~L~GH 256 (649)
|. ..|.++++|++||+++|++.+ +...+|++.|+|+... ....+++++.++++++ +++++||||
T Consensus 133 g~-----~~G~l~~~ql~wL~~~L~~~~----~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH 203 (275)
T PRK11148 133 GV-----PHGELSEYQLEWLERKLADAP----ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGH 203 (275)
T ss_pred CC-----cCCEeCHHHHHHHHHHHhhCC----CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecc
Confidence 31 357899999999999998764 2223444555565421 1234667999999998 699999999
Q ss_pred ccCCC
Q 006340 257 LHTRF 261 (649)
Q Consensus 257 tH~~~ 261 (649)
+|...
T Consensus 204 ~H~~~ 208 (275)
T PRK11148 204 IHQEL 208 (275)
T ss_pred cChHH
Confidence 99865
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-21 Score=196.50 Aligned_cols=180 Identities=24% Similarity=0.356 Sum_probs=122.3
Q ss_pred EEEEEcCCCCCCCCC------CcHHHHHHHHHHHHhcc--CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 42 WAVQLSDLHFSVHHP------DRASDFKRIVGPALSMI--SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 42 ~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~~~--kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
||+||||+|++...+ +....+++++ +.+++. +||+|+++|||++.+..+ +|+ .+.+.+.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~~~~d~vi~~GDl~~~~~~~---------~~~---~~~~~l~ 67 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVL-AHINALHPRPDLVLVTGDLTDDGSPE---------SYE---RLRELLA 67 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHH-HHHHhcCCCCCEEEECccCCCCCCHH---------HHH---HHHHHHh
Confidence 699999999997532 3345688888 445555 999999999999986531 233 3333333
Q ss_pred HhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFG 193 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G 193 (649)
+ + ++|++.++||||... ....++.+. . ...+.. .+.+ ..++++||++|+.... ...|
T Consensus 68 ~---~-~~p~~~v~GNHD~~~-----~~~~~~~~~---~--~~~~~~-~~~~--~~~~~~~i~lds~~~~------~~~~ 124 (240)
T cd07402 68 A---L-PIPVYLLPGNHDDRA-----AMRAVFPEL---P--PAPGFV-QYVV--DLGGWRLILLDSSVPG------QHGG 124 (240)
T ss_pred h---c-CCCEEEeCCCCCCHH-----HHHHhhccc---c--cccccc-ceeE--ecCCEEEEEEeCCCCC------CcCC
Confidence 3 2 469999999999853 111122211 0 001111 2333 4457999999986532 1346
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC-------CCCchhHHHHHHHhC-CceEEEeCcccCCCC
Q 006340 194 HPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA-------SSHSGRSLQDIFLKH-SLSAYLCGHLHTRFG 262 (649)
Q Consensus 194 ~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~-------~~~~~~~l~~ll~~~-~v~l~L~GHtH~~~g 262 (649)
.++++|++||+++|++.+ .+++|+++|+|+.... ...+.+++.++++++ ++++++|||+|....
T Consensus 125 ~~~~~ql~wL~~~L~~~~-----~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~ 196 (240)
T cd07402 125 ELCAAQLDWLEAALAEAP-----DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPID 196 (240)
T ss_pred EECHHHHHHHHHHHHhCC-----CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHH
Confidence 789999999999999753 2478999999875321 123467899999999 899999999998753
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=195.92 Aligned_cols=193 Identities=17% Similarity=0.180 Sum_probs=126.0
Q ss_pred eEEEEEcCCCCCCCCC-------CcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP-------DRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~-------~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
|||+||||+|+..... +....+++++ +.+++.+||+||++|||++.+..+ .+++|+...+.+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i-~~i~~~~~d~vv~~GDlv~~~~~~------~~~~~~~~~~~l~~-- 71 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAV-EEWNRESLDFVVQLGDIIDGDNAR------AEEALDAVLAILDR-- 71 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHH-HHHHcCCCCEEEECCCeecCCCch------HHHHHHHHHHHHHh--
Confidence 6999999999776421 1235677877 456677899999999999877532 12334444444433
Q ss_pred HhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCC-------
Q 006340 114 KRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLR------- 186 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~------- 186 (649)
+ +.|++.++||||..+.. ..++.... . ...+.. .+.+ ..++++||.+|+....-..
T Consensus 72 ----l-~~p~~~v~GNHD~~~~~-----~~~~~~~~--~--~~~~~~-yysf--~~~~~~~i~lds~~~~~~~~~~~~~~ 134 (267)
T cd07396 72 ----L-KGPVHHVLGNHDLYNPS-----REYLLLYT--L--LGLGAP-YYSF--SPGGIRFIVLDGYDISALGRPEDTPK 134 (267)
T ss_pred ----c-CCCEEEecCcccccccc-----Hhhhhccc--c--cCCCCc-eEEE--ecCCcEEEEEeCCccccccCCCCChh
Confidence 2 36999999999997521 11111000 0 011111 1333 3457899999985421100
Q ss_pred -----------------CCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC-----CCCchhHHHHHH
Q 006340 187 -----------------GPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA-----SSHSGRSLQDIF 244 (649)
Q Consensus 187 -----------------~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~-----~~~~~~~l~~ll 244 (649)
.+..+.|.++++|++||+++|++.+. +..++|+++|+|+.... ...+.+.+.+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~---~~~~viV~~Hhp~~~~~~~~~~~~~~~~~~~~ll 211 (267)
T cd07396 135 AENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA---NGEKVIIFSHFPLHPESTSPHGLLWNHEEVLSIL 211 (267)
T ss_pred hhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh---cCCeEEEEEeccCCCCCCCccccccCHHHHHHHH
Confidence 01124688999999999999997642 23579999999975322 123467899999
Q ss_pred HhC-CceEEEeCcccCCCC
Q 006340 245 LKH-SLSAYLCGHLHTRFG 262 (649)
Q Consensus 245 ~~~-~v~l~L~GHtH~~~g 262 (649)
+++ +++++||||+|....
T Consensus 212 ~~~~~V~~v~~GH~H~~~~ 230 (267)
T cd07396 212 RAYGCVKACISGHDHEGGY 230 (267)
T ss_pred HhCCCEEEEEcCCcCCCCc
Confidence 996 699999999998863
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=195.17 Aligned_cols=268 Identities=13% Similarity=0.138 Sum_probs=151.9
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
+.++|++++|+|.... ...+.++++. +. ..+||+|+++|||+++.... .+.+|+.|.+.++.+..
T Consensus 3 ~~~~f~v~gD~~~~~~--~~~~~~~~l~-~~--~~~~d~vl~~GDl~~~~~~~------~~~~~~~~~~~~~~~~~---- 67 (294)
T cd00839 3 TPFKFAVFGDMGQNTN--NSTNTLDHLE-KE--LGNYDAILHVGDLAYADGYN------NGSRWDTFMRQIEPLAS---- 67 (294)
T ss_pred CcEEEEEEEECCCCCC--CcHHHHHHHH-hc--cCCccEEEEcCchhhhcCCc------cchhHHHHHHHHHHHHh----
Confidence 5699999999997522 2222233333 11 47899999999999765432 12357777777776643
Q ss_pred CCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHH
Q 006340 119 EKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQ 198 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~ 198 (649)
++|++.++||||.............+..+.. ....... .....+.++.++++||++|+.... ..|.+.++
T Consensus 68 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~Ysf~~g~v~fi~Lds~~~~-------~~~~~~~~ 137 (294)
T cd00839 68 -YVPYMVTPGNHEADYNFSFYKIKAFFPRFRF-PHSPSGS-TSNLWYSFDVGPVHFVSLSTEVDF-------YGDGPGSP 137 (294)
T ss_pred -cCCcEEcCcccccccCCCCcccccccccccc-cCCCCCC-CCCceEEEeeCCEEEEEEeccccc-------ccCCCCcH
Confidence 4699999999998643211100000000000 0000111 112223444567999999986532 14567899
Q ss_pred HHHHHHHHHhcccccCCCCceEEEEEecCCCccCC--------CCchhHHHHHHHhCCceEEEeCcccCCCCCccceeee
Q 006340 199 LLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS--------SHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHY 270 (649)
Q Consensus 199 qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~--------~~~~~~l~~ll~~~~v~l~L~GHtH~~~g~~l~~~h~ 270 (649)
|++||+++|++.++. +..++|+++|+|+..... ...++.|.+++++++++++||||+|..+.. .++-.
T Consensus 138 q~~WL~~~L~~~~~~--~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~--~p~~~ 213 (294)
T cd00839 138 QYDWLEADLAKVDRS--KTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERT--CPVYN 213 (294)
T ss_pred HHHHHHHHHHHhccc--CCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEee--chhhC
Confidence 999999999976521 224799999999875221 233467889999999999999999988731 11100
Q ss_pred ccccccccccccCCccccccCCcccccCCCCCCCc-cceeeecccccccceEEEEEcCC-EEEEEEEe
Q 006340 271 MDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGE-FWEWEMGDWRKSRAMRILAIDRG-HISYVDID 336 (649)
Q Consensus 271 ~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g-~~ele~~dw~~~r~yrvl~iD~~-~~sf~d~~ 336 (649)
...--.+..+..++-..++..+..+|......... ..++.... ....+|.++.+.++ .+.++.++
T Consensus 214 ~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~t~l~~~~~~ 280 (294)
T cd00839 214 GTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFR-ESDYGFGRLTVHNSTHLHFEWIR 280 (294)
T ss_pred CEeccccccccCCCccEEEEECCCccccCcCcccCCCCCceEEE-eccCCEEEEEEEecCeEEEEEEE
Confidence 00000001111222223333334444332211010 01222111 24579999999876 88886554
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=190.17 Aligned_cols=188 Identities=15% Similarity=0.182 Sum_probs=124.2
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
..++|++++|+|.+... ++.+ +.+++.+||+|+++|||+++... +..|+.+.+.++.+..
T Consensus 138 ~~~~f~v~GDlG~~~~~-------~~tl-~~i~~~~pD~vl~~GDl~y~~~~--------~~~wd~f~~~i~~l~s---- 197 (427)
T PLN02533 138 FPIKFAVSGDLGTSEWT-------KSTL-EHVSKWDYDVFILPGDLSYANFY--------QPLWDTFGRLVQPLAS---- 197 (427)
T ss_pred CCeEEEEEEeCCCCccc-------HHHH-HHHHhcCCCEEEEcCccccccch--------HHHHHHHHHHhhhHhh----
Confidence 46999999999854321 2344 33456799999999999986532 2358778777777643
Q ss_pred CCceEEEecCCCCCCCCCCCCCchhhhcccccccccCC--CCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCC
Q 006340 119 EKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGR--KQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPA 196 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~--~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~ 196 (649)
..|++.++||||....+.. ..+.|..|...-.+.. .+......++++.++++||.+|+.... ...
T Consensus 198 -~~P~m~~~GNHE~~~~~~~--~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~----------~~~ 264 (427)
T PLN02533 198 -QRPWMVTHGNHELEKIPIL--HPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDF----------EPG 264 (427)
T ss_pred -cCceEEeCccccccccccc--cCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCccc----------cCc
Confidence 4699999999998753321 0111222210000010 011112234455677999999986421 245
Q ss_pred HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC--------CchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 197 DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS--------HSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 197 ~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~--------~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
.+|++||+++|++.++ ++..++|+++|+|+.+.... ..++.+.++|.+++|+++||||.|..+
T Consensus 265 ~~Q~~WLe~dL~~~~r--~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~Ye 335 (427)
T PLN02533 265 SEQYQWLENNLKKIDR--KTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYE 335 (427)
T ss_pred hHHHHHHHHHHHhhcc--cCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceeccc
Confidence 7899999999997652 12347999999998753211 123478899999999999999999887
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=179.24 Aligned_cols=200 Identities=19% Similarity=0.221 Sum_probs=124.3
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHH-HHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEW-MEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW-~~Y~~vl~~L~~~~~l~ 119 (649)
++|+.++|.-.+.. . ....+.+.+.+.+++.+|||||++||++.+...... + ..+| +.|+++++.+. .
T Consensus 1 ~~f~~~gD~g~~~~-~-~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~---~-~~~~~~~~~~~~~~~~-----~ 69 (277)
T cd07378 1 LRFLALGDWGGGGT-A-GQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSV---D-DPRFETTFEDVYSAPS-----L 69 (277)
T ss_pred CeEEEEeecCCCCC-H-HHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCC---c-chHHHHHHHHHccchh-----h
Confidence 47999999986521 1 113455555455566899999999999744322110 0 1223 34666555442 2
Q ss_pred CceEEEecCCCCCCCCCCCCCchhhhcc-cccccccCCCCccceEEEEeC----CeeEEEEEecCCCccCCCCC-----C
Q 006340 120 KSIFYDIRGNHDNFGVPIVGGSFDFFSK-HSINGQLGRKQNVNSVTVQIG----DEKHLFVGFDSTMSVGLRGP-----T 189 (649)
Q Consensus 120 ~~p~~~I~GNHD~~~v~~~~~~~~~~~~-ys~~~~l~~~~~~~~~~~~~~----~g~~~fIglD~~~~pG~~~p-----~ 189 (649)
++|+|.++||||..+... ....+... +. ........ .|.+..+ +++++||++|+........+ .
T Consensus 70 ~~P~~~v~GNHD~~~~~~--~~~~~~~~~~~--~~~~~~~~--~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~ 143 (277)
T cd07378 70 QVPWYLVLGNHDYSGNVS--AQIDYTKRPNS--PRWTMPAY--YYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYG 143 (277)
T ss_pred cCCeEEecCCcccCCCch--heeehhccCCC--CCccCcch--heEEEeecCCCCCEEEEEEEeChhHcCcccccccccc
Confidence 469999999999864211 11111111 01 11111111 2445444 34799999999865321110 0
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC----CchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 190 NLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS----HSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 190 ~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~----~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
...|.+.++|++||+++|++.+ .+++|+++|+|+...... ..+..+.+++++++++++||||+|..+.
T Consensus 144 ~~~~~~~~~Q~~wL~~~L~~~~-----~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~ 215 (277)
T cd07378 144 PPNGKLAEEQLAWLEKTLAAST-----ADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQH 215 (277)
T ss_pred CcchhhHHHHHHHHHHHHHhcC-----CCeEEEEeCccceeCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCccccee
Confidence 2356788999999999998753 258999999998642211 2346788999999999999999998863
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.4e-19 Score=176.08 Aligned_cols=147 Identities=20% Similarity=0.277 Sum_probs=103.9
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHH---HHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVG---PALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSG 117 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~---~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~ 117 (649)
|+|+++||+|..... ..+.+++.++ +.+++.+||+|+++||+++.+... .+|+.+.++++.+.+
T Consensus 1 f~~~~~~D~q~~~~~--~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~--------~~~~~~~~~~~~l~~--- 67 (214)
T cd07399 1 FTLAVLPDTQYYTES--YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDND--------AEWEAADKAFARLDK--- 67 (214)
T ss_pred CEEEEecCCCcCCcC--CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCH--------HHHHHHHHHHHHHHH---
Confidence 689999999987643 2223433332 334557899999999999987631 247777778887753
Q ss_pred CCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCH
Q 006340 118 LEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPAD 197 (649)
Q Consensus 118 l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~ 197 (649)
.+.|++.++||||.. +.+|. ..++
T Consensus 68 -~~~p~~~~~GNHD~~-----------------------------------------~~ld~--------------~~~~ 91 (214)
T cd07399 68 -AGIPYSVLAGNHDLV-----------------------------------------LALEF--------------GPRD 91 (214)
T ss_pred -cCCcEEEECCCCcch-----------------------------------------hhCCC--------------CCCH
Confidence 236999999999921 11221 1247
Q ss_pred HHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC----------CCch-hHHHHHHHhC-CceEEEeCcccCCC
Q 006340 198 QLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS----------SHSG-RSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 198 ~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~----------~~~~-~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
+|++||+++|++.+ ++++|+++|+|+..... ..++ +.+.++++++ +|+++||||.|...
T Consensus 92 ~ql~WL~~~L~~~~-----~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~ 162 (214)
T cd07399 92 EVLQWANEVLKKHP-----DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAG 162 (214)
T ss_pred HHHHHHHHHHHHCC-----CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCc
Confidence 89999999998653 35799999999764211 1122 3577999998 59999999999886
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-18 Score=181.14 Aligned_cols=192 Identities=14% Similarity=0.133 Sum_probs=114.7
Q ss_pred HHHHHHHHHHhcc--CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCC
Q 006340 61 DFKRIVGPALSMI--SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIV 138 (649)
Q Consensus 61 ~l~~~i~~~l~~~--kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~ 138 (649)
-+++++ +.+++. +||+||+|||+++....+.....+.+..++...+.+++ . .+++|++.++||||......+
T Consensus 54 l~~s~l-~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~---~--~~~~pv~~~~GNHD~~p~~~~ 127 (296)
T cd00842 54 LVESAL-EAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKK---A--FPDTPVYPALGNHDSYPVNQF 127 (296)
T ss_pred HHHHHH-HHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHH---h--CCCCCEEEcCCCCCCCccccc
Confidence 466777 445454 89999999999988764321111111023323233333 2 456899999999999754322
Q ss_pred CC---chhhhccccc-ccc-cCCC---C-ccc-eEEEEeCCeeEEEEEecCCCccCCCCCCC-CCCCCCHHHHHHHHHHH
Q 006340 139 GG---SFDFFSKHSI-NGQ-LGRK---Q-NVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPTN-LFGHPADQLLTEIDSEL 207 (649)
Q Consensus 139 ~~---~~~~~~~ys~-~~~-l~~~---~-~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~~-~~G~l~~~qL~wL~~~L 207 (649)
.. ....|..++. ++. +... . ..+ .|.+.. .+++++|++|+........... ..+....+|++||+++|
T Consensus 128 ~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~-~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L 206 (296)
T cd00842 128 PPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPV-KPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDEL 206 (296)
T ss_pred CCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEc-CCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHH
Confidence 11 1111211110 000 0000 0 011 233333 5679999999887543221100 12345578999999999
Q ss_pred hcccccCCCCceEEEEEecCCCccCCC---CchhHHHHHHHhCC--ceEEEeCcccCCCC
Q 006340 208 SQWNSQSTKPVTKITFGHFPVSFSASS---HSGRSLQDIFLKHS--LSAYLCGHLHTRFG 262 (649)
Q Consensus 208 ~~~~~~~~~~~~~Ilf~H~P~~~~~~~---~~~~~l~~ll~~~~--v~l~L~GHtH~~~g 262 (649)
+++++ +...+++++|+|+...... ...+++.+++++|+ +.++|+||+|..+.
T Consensus 207 ~~a~~---~~~~v~I~~HiPp~~~~~~~~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~ 263 (296)
T cd00842 207 QEAEQ---AGEKVWIIGHIPPGVNSYDTLENWSERYLQIINRYSDTIAGQFFGHTHRDEF 263 (296)
T ss_pred HHHHH---CCCeEEEEeccCCCCcccccchHHHHHHHHHHHHHHHhhheeeecccccceE
Confidence 98763 2357899999998753322 35578999999997 78999999998874
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=180.30 Aligned_cols=136 Identities=20% Similarity=0.248 Sum_probs=97.9
Q ss_pred EEeC-CeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC-----------
Q 006340 165 VQIG-DEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA----------- 232 (649)
Q Consensus 165 ~~~~-~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~----------- 232 (649)
|+++ .++++||+||++...| .+.|.++++|++||+++|++.+ .+++|+|+|||+....
T Consensus 294 YSFd~~ggvrfIvLDSt~~~G-----~~~G~L~eeQL~WLeqeLa~a~-----~k~VVVf~HHPp~s~g~~~~Dp~~pg~ 363 (496)
T TIGR03767 294 YTFDIAGGVRGISMDTTNRAG-----GDEGSLGQTQFKWIKDTLRASS-----DTLFVLFSHHTSWSMVNELTDPVDPGE 363 (496)
T ss_pred EEEEeECCEEEEEEeCCCcCC-----CcCCccCHHHHHHHHHHHhcCC-----CCCEEEEECCCCccccccccccccccc
Confidence 3344 4569999999986422 2568999999999999998642 3579999999864211
Q ss_pred CCCchhHHHHHHHhC-CceEEEeCcccCCCCCccceeeeccccccccccccCCccccccCCcccccCCCCCCCccceeee
Q 006340 233 SSHSGRSLQDIFLKH-SLSAYLCGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEM 311 (649)
Q Consensus 233 ~~~~~~~l~~ll~~~-~v~l~L~GHtH~~~g~~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g~~ele~ 311 (649)
...++++|.++|+++ +|.++||||+|.+... . |...+ +..+.+|+||++.
T Consensus 364 ~~~n~~eLldLL~~ypnV~aVfsGHvH~n~i~---~-~~~~~-------------------------~~~p~~gfweI~T 414 (496)
T TIGR03767 364 KRHLGTELVSLLLEHPNVLAWVNGHTHSNKIT---A-HRRVE-------------------------GVGKDKGFWEINT 414 (496)
T ss_pred cccCHHHHHHHHhcCCCceEEEECCcCCCccc---c-ccCCC-------------------------CCCCcCCeEEEec
Confidence 123457899999998 6999999999988631 1 11110 1112358999999
Q ss_pred ccccc-ccceEEEEE---cCCEEEEEEEeecc
Q 006340 312 GDWRK-SRAMRILAI---DRGHISYVDIDFKS 339 (649)
Q Consensus 312 ~dw~~-~r~yrvl~i---D~~~~sf~d~~~~~ 339 (649)
+...+ +..||++.| .++.+|+....++.
T Consensus 415 aSlvdfPq~~Ri~Ei~~n~dgt~si~tt~vd~ 446 (496)
T TIGR03767 415 ASHIDFPQQGRIIELADNQDGTVSIFTTLIES 446 (496)
T ss_pred cccccCCCCceEEEEEeCCCCcEEEEEEeccc
Confidence 88765 668999999 66778887666665
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.1e-17 Score=168.22 Aligned_cols=208 Identities=15% Similarity=0.185 Sum_probs=123.2
Q ss_pred eEEEE-eCCCCCCceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHH
Q 006340 28 RRVIQ-LREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQ 106 (649)
Q Consensus 28 ~~~~~-~~~~p~~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~ 106 (649)
+++++ .|+.++ .+|++|+||+|++.+.+ ...+++++ +.+++.+||+|+++||++|..... +++.+.
T Consensus 37 ~~~i~~~~~~~~-~~rI~~lSDlH~~~~~~--~~~l~~~v-~~i~~~~pDlVli~GD~~d~~~~~---------~~~~~~ 103 (271)
T PRK11340 37 RHRLAFFKDNAA-PFKILFLADLHYSRFVP--LSLISDAI-ALGIEQKPDLILLGGDYVLFDMPL---------NFSAFS 103 (271)
T ss_pred EEEccCCCCCCC-CcEEEEEcccCCCCcCC--HHHHHHHH-HHHHhcCCCEEEEccCcCCCCccc---------cHHHHH
Confidence 35566 555443 59999999999986543 23567777 556788999999999999843221 122344
Q ss_pred HHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccc-eEEEEeCCeeEEEEEecCCCccCC
Q 006340 107 NVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVGL 185 (649)
Q Consensus 107 ~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG~ 185 (649)
+.++++.+ ..|+|.|+||||...-. ...+.+.+.. ++.+..-..+ ...+..++..+.++|+|+... +
T Consensus 104 ~~L~~L~~-----~~pv~~V~GNHD~~~~~---~~~~~~~~~l--~~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~-~- 171 (271)
T PRK11340 104 DVLSPLAE-----CAPTFACFGNHDRPVGT---EKNHLIGETL--KSAGITVLFNQATVIATPNRQFELVGTGDLWA-G- 171 (271)
T ss_pred HHHHHHhh-----cCCEEEecCCCCcccCc---cchHHHHHHH--HhcCcEEeeCCeEEEeeCCcEEEEEEecchhc-c-
Confidence 56777653 24899999999975210 0111122111 1112222222 455556667788999987532 1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCCCcc
Q 006340 186 RGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNL 265 (649)
Q Consensus 186 ~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g~~l 265 (649)
..+. .+.++ ++.+.|++.|.|.... .+.+.+++++||||||.+|.+..
T Consensus 172 --------~~~~------~~~~~-------~~~~~IlL~H~P~~~~-----------~~~~~~~dL~lsGHTHGGQi~lP 219 (271)
T PRK11340 172 --------QCKP------PPASE-------ANLPRLVLAHNPDSKE-----------VMRDEPWDLMLCGHTHGGQLRVP 219 (271)
T ss_pred --------CCCh------hHhcC-------CCCCeEEEEcCCChhH-----------hhccCCCCEEEeccccCCeEEcc
Confidence 1111 11121 1248999999997642 12345799999999999986311
Q ss_pred c---ee-eeccccccccccccCCccccccCC
Q 006340 266 K---RH-HYMDHNFLSQKFFQSNMHQIPLGS 292 (649)
Q Consensus 266 ~---~~-h~~~~~~~~G~~~~~~~~~~~~~~ 292 (649)
. .. ...+.++..|.|..+++.++++.+
T Consensus 220 ~~~~~~~~~~~~~~~~G~~~~~~~~l~Vs~G 250 (271)
T PRK11340 220 LVGEPFAPVEDKRYVAGLNAFGERQIYTTRG 250 (271)
T ss_pred ccCccccccccCcccCCcEEeCCcEEEEeCC
Confidence 0 00 011234777777777766654443
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.5e-17 Score=160.23 Aligned_cols=152 Identities=20% Similarity=0.287 Sum_probs=103.9
Q ss_pred ceEEEEEcCCCCCCCCCC-----cHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHPD-----RASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIK 114 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~-----~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~ 114 (649)
.|||+||||+|++..... ......+.+.+.++..+||+||++||+++...... +.++.++++++.+..
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~-------~~~~~~~~~~~~l~~ 74 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTND-------NSTSALDKAVSPMID 74 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCch-------HHHHHHHHHHHHHHH
Confidence 589999999999886421 11122334445566789999999999999776421 123344556665543
Q ss_pred hcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCC
Q 006340 115 RSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGH 194 (649)
Q Consensus 115 ~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~ 194 (649)
.++|++.++|||| ..|.
T Consensus 75 ----~~~p~~~~~GNHD-----------------------------------------------------------~~g~ 91 (199)
T cd07383 75 ----RKIPWAATFGNHD-----------------------------------------------------------GYDW 91 (199)
T ss_pred ----cCCCEEEECccCC-----------------------------------------------------------CCCC
Confidence 2469999999999 1346
Q ss_pred CCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCcc------------------CCCCchhHHHHHH-HhCCceEEEeC
Q 006340 195 PADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFS------------------ASSHSGRSLQDIF-LKHSLSAYLCG 255 (649)
Q Consensus 195 l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~------------------~~~~~~~~l~~ll-~~~~v~l~L~G 255 (649)
++++|++||++++++.....+...+.++|.|+|+... ....+..++.+.+ +..++++++||
T Consensus 92 l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~G 171 (199)
T cd07383 92 IRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCG 171 (199)
T ss_pred CCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeC
Confidence 7889999999999876321123358999999987521 0112345566666 44569999999
Q ss_pred cccCCC
Q 006340 256 HLHTRF 261 (649)
Q Consensus 256 HtH~~~ 261 (649)
|+|.+.
T Consensus 172 H~H~~~ 177 (199)
T cd07383 172 HDHGND 177 (199)
T ss_pred CCCCcc
Confidence 999865
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.2e-16 Score=166.62 Aligned_cols=272 Identities=14% Similarity=0.092 Sum_probs=173.5
Q ss_pred EEEEeCCCCCCceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHH
Q 006340 29 RVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNV 108 (649)
Q Consensus 29 ~~~~~~~~p~~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~v 108 (649)
..+..|...+...+++.++|+=....... ..... ....|+|+|++.|||+.+..... ..|..|-+.
T Consensus 136 f~F~t~p~~~~~~~~~i~GDlG~~~~~~s----~~~~~---~~~~k~d~vlhiGDlsYa~~~~n-------~~wD~f~r~ 201 (452)
T KOG1378|consen 136 FSFKTPPGQDSPTRAAIFGDMGCTEPYTS----TLRNQ---EENLKPDAVLHIGDLSYAMGYSN-------WQWDEFGRQ 201 (452)
T ss_pred eEeECCCCccCceeEEEEccccccccccc----hHhHH---hcccCCcEEEEecchhhcCCCCc-------cchHHHHhh
Confidence 34444442225699999999966553321 12222 12338999999999997765321 238888888
Q ss_pred HHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCc--cceEEEEeCCeeEEEEEecCCCccCCC
Q 006340 109 MQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQN--VNSVTVQIGDEKHLFVGFDSTMSVGLR 186 (649)
Q Consensus 109 l~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~--~~~~~~~~~~g~~~fIglD~~~~pG~~ 186 (649)
++.+++ ..||+++.||||....++. -|..|...-.+..... .++..++++.|.+|||++++..+.|.
T Consensus 202 vEp~As-----~vPymv~~GNHE~d~~~~~-----~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~- 270 (452)
T KOG1378|consen 202 VEPIAS-----YVPYMVCSGNHEIDWPPQP-----CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNF- 270 (452)
T ss_pred hhhhhc-----cCceEEecccccccCCCcc-----cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccc-
Confidence 888764 4699999999999764432 2333332111111111 11245667778999999998765321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC---------CchhHHHHHHHhCCceEEEeCcc
Q 006340 187 GPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS---------HSGRSLQDIFLKHSLSAYLCGHL 257 (649)
Q Consensus 187 ~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~---------~~~~~l~~ll~~~~v~l~L~GHt 257 (649)
....+|.+||+++|+++++. +..++|++.|.|+++.... .-+.+|+++|-+++|+++|.||.
T Consensus 271 -------~~~~~QY~WL~~dL~~v~r~--~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHv 341 (452)
T KOG1378|consen 271 -------LKGTAQYQWLERDLASVDRK--KTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHV 341 (452)
T ss_pred -------cccchHHHHHHHHHHHhccc--CCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccc
Confidence 24468999999999998742 1469999999999874321 11247999999999999999999
Q ss_pred cCCCCCccceeeec--cccccccccccCCccccccCCcccccCCCCCCC-ccceeeecccccccceEEEEE-cCCEEEEE
Q 006340 258 HTRFGKNLKRHHYM--DHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIG-EFWEWEMGDWRKSRAMRILAI-DRGHISYV 333 (649)
Q Consensus 258 H~~~g~~l~~~h~~--~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~-g~~ele~~dw~~~r~yrvl~i-D~~~~sf~ 333 (649)
|..+. +.+.-.. .++.-++++..+..++++..+..+|..+....- -.++|.+-.- ..=||.++.+ ++.+..+.
T Consensus 342 H~YER--~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R~-~dfG~~~L~v~N~TH~~~~ 418 (452)
T KOG1378|consen 342 HRYER--FCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFRE-GDFGYTRLTAKNGTHAHVH 418 (452)
T ss_pred eehhc--cchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCccccccc-ccCCeEEEEEecCceEEEE
Confidence 99985 3332111 122226678888888888888888877665422 2334433221 1235666655 44566665
Q ss_pred EEee
Q 006340 334 DIDF 337 (649)
Q Consensus 334 d~~~ 337 (649)
.++-
T Consensus 419 ~~~~ 422 (452)
T KOG1378|consen 419 WVRN 422 (452)
T ss_pred EEec
Confidence 5554
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.8e-17 Score=163.99 Aligned_cols=186 Identities=17% Similarity=0.211 Sum_probs=112.9
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
||+||||+|+..........+++++ +.+++.+||+|+++|||++.... ....++.+.+ +...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~-~~~~~~~~d~vv~~GDl~~~~~~--------------~~~~~~~l~~---~~~~ 62 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLA-QYLKKQKIDHLHIAGDISNDFQR--------------SLPFIEKLQE---LKGI 62 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHH-HHHHhcCCCEEEECCccccchhh--------------HHHHHHHHHH---hcCC
Confidence 5899999998632222223466777 55667789999999999986421 1124444443 1246
Q ss_pred eEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCcc--CC--------------
Q 006340 122 IFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSV--GL-------------- 185 (649)
Q Consensus 122 p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~p--G~-------------- 185 (649)
|++.++||||.... ...+.++++. ......+ ....+..+++.|++++..... +.
T Consensus 63 pv~~v~GNHD~~~~----~~~~~~~~~~-----~~~~l~~-~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 63 KVTFNAGNHDMLKD----LTYEEIESND-----SPLYLHN-RFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred cEEEECCCCCCCCC----CCHHHHHhcc-----chhhhcc-cccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 99999999998521 1111122111 0000111 111222356889988732111 00
Q ss_pred ------CCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCcc---------CC-----CCchhHHHHHHH
Q 006340 186 ------RGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFS---------AS-----SHSGRSLQDIFL 245 (649)
Q Consensus 186 ------~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~---------~~-----~~~~~~l~~ll~ 245 (649)
..|. ..|.+.+++++||++.|++.. ++++|+++|+|+... .. ..+..++.++++
T Consensus 133 ~~~~~~~~~~-~~~~~~~~~l~~l~~~l~~~~-----~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~ 206 (239)
T TIGR03729 133 WFDRRIKRPM-SDPERTAIVLKQLKKQLNQLD-----NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLV 206 (239)
T ss_pred EeecccCCCC-ChHHHHHHHHHHHHHHHHhcC-----CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHH
Confidence 0111 124566789999999998653 247999999986421 10 113478999999
Q ss_pred hCCceEEEeCcccCCC
Q 006340 246 KHSLSAYLCGHLHTRF 261 (649)
Q Consensus 246 ~~~v~l~L~GHtH~~~ 261 (649)
++++++++|||+|...
T Consensus 207 ~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 207 KYEIKDVIFGHLHRRF 222 (239)
T ss_pred HhCCCEEEECCccCCC
Confidence 9999999999999885
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.4e-16 Score=166.30 Aligned_cols=137 Identities=19% Similarity=0.195 Sum_probs=92.2
Q ss_pred eEEEEEecCCCccCC-CCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCc-cC-C--------------
Q 006340 171 KHLFVGFDSTMSVGL-RGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSF-SA-S-------------- 233 (649)
Q Consensus 171 ~~~fIglD~~~~pG~-~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~-~~-~-------------- 233 (649)
.+++|+||++.+.|. ..|..+.|.++++||+||+++|++.+. +...+|+++|+|+.. .. .
T Consensus 304 plrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a---~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~~~~ 380 (492)
T TIGR03768 304 PLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA---DGQLMIIAAHIPIAVSPIGSEMEWWLGAADANPD 380 (492)
T ss_pred ceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC---CCceEEEEeCCCcccCCccchhhhcccccccccc
Confidence 459999999975432 223457899999999999999997641 223577777778753 11 0
Q ss_pred CC---chhHHHHHHHhCC-ceEEEeCcccCCCCCccceeeeccccccccccccCCccccccCCcccccCCCCCCCcccee
Q 006340 234 SH---SGRSLQDIFLKHS-LSAYLCGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEW 309 (649)
Q Consensus 234 ~~---~~~~l~~ll~~~~-v~l~L~GHtH~~~g~~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g~~el 309 (649)
.+ ++.+|.++|.+|+ |.++||||.|.... +. |.... +..+.+||||+
T Consensus 381 L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~v---~a-~~~p~-------------------------~~~pe~gFWev 431 (492)
T TIGR03768 381 LQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNTV---KA-FPSPD-------------------------PARPEYGFWQV 431 (492)
T ss_pred ccccccHHHHHHHHhcCCCeEEEEcCCcccccc---cc-cCCCC-------------------------CCCCcCceEEE
Confidence 11 2348999999995 99999999998853 22 11110 11123689999
Q ss_pred eeccccc-ccceEEEEE---cCCEEEEEEEeecc
Q 006340 310 EMGDWRK-SRAMRILAI---DRGHISYVDIDFKS 339 (649)
Q Consensus 310 e~~dw~~-~r~yrvl~i---D~~~~sf~d~~~~~ 339 (649)
|...-.+ +..+|++.| .++.+|+.....+.
T Consensus 432 eTaSl~DfPQq~R~~Ei~~n~d~tvsi~tt~vd~ 465 (492)
T TIGR03768 432 ETASLRDFPQQFRTFEIYLNSDDTVSIEAVNVDV 465 (492)
T ss_pred eehhhccchhhceEEEEEeCCCCeEEEEEEecch
Confidence 9877665 456776666 45678887666653
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-16 Score=161.85 Aligned_cols=190 Identities=16% Similarity=0.141 Sum_probs=112.9
Q ss_pred EEEEcCCCCCC-------CCCCcHHHHHHHHHHHHhcc--CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 43 AVQLSDLHFSV-------HHPDRASDFKRIVGPALSMI--SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 43 fv~ISDlHls~-------~~~~~~~~l~~~i~~~l~~~--kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
+.|+||+|+.. ...+.+.++.+.+.+.+++. +||+|+++|||++....+ .+...++.+.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~------------~~~~~l~~l~ 68 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE------------EAKLDLAWID 68 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH------------HHHHHHHHHH
Confidence 46899999983 12222333444444666665 999999999999655321 1223344444
Q ss_pred HhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCC-----
Q 006340 114 KRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGP----- 188 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p----- 188 (649)
+ ++ .|+|.|+||||... ...+.+++... ..+.....+ ..+.. +++.|+|++....++. .+
T Consensus 69 ~---l~-~~v~~V~GNHD~~~-----~~~~~~~~~l~--~~~~~~~~n-~~~~~--~~i~i~G~~~~~~~~~-~~~~~~~ 133 (232)
T cd07393 69 A---LP-GTKVLLKGNHDYWW-----GSASKLRKALE--ESRLALLFN-NAYID--DDVAICGTRGWDNPGN-PWPPINE 133 (232)
T ss_pred h---CC-CCeEEEeCCccccC-----CCHHHHHHHHH--hcCeEEecc-CcEEE--CCEEEEEEEeeCCCCC-ccccccc
Confidence 3 22 37899999999842 11222222110 001100111 12222 3588888864332211 11
Q ss_pred ---CCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 189 ---TNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 189 ---~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
....|.+.++|++||+++|++.+.. ....++|+++|+|..... .+...+.++++++++++++|||+|..+.
T Consensus 134 ~~~~~~~~~~~~~~l~~l~~~L~~~~~~-~~~~~~i~~~H~p~~~~~--~~~~~~~~~~~~~~v~~vl~GH~H~~~~ 207 (232)
T cd07393 134 TLKVEEDEKIFERELERLELSLKAAKKR-EKEKIKIVMLHYPPANEN--GDDSPISKLIEEYGVDICVYGHLHGVGR 207 (232)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcCCC--CCHHHHHHHHHHcCCCEEEECCCCCCcc
Confidence 1123455678999999999876421 111369999999875422 2456788999999999999999998874
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=6e-16 Score=161.09 Aligned_cols=184 Identities=22% Similarity=0.359 Sum_probs=119.6
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
++|+||||+|+++......+.+.+++ +.++..+||++|+||||++.+... +++..++.++.+ . ..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~-~~i~~~~~D~~v~tGDl~~~~~~~---------~~~~~~~~l~~~-~----~~ 65 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALL-AAIEQLKPDLLVVTGDLTNDGEPE---------EYRRLKELLARL-E----LP 65 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHH-HHHhcCCCCEEEEccCcCCCCCHH---------HHHHHHHHHhhc-c----CC
Confidence 58999999999952233344566776 567788999999999999996542 233333444311 1 23
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCC-eeEEEEEecCCCccCCCCCCCCCCCCCHHH
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGD-EKHLFVGFDSTMSVGLRGPTNLFGHPADQL 199 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~-g~~~fIglD~~~~pG~~~p~~~~G~l~~~q 199 (649)
.|++.+|||||.+.. ....+.+... .... +...... +...++++|+.... .-.|.+.+.|
T Consensus 66 ~~~~~vpGNHD~~~~-----~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~d~~~~~------~~~G~~~~~q 126 (301)
T COG1409 66 APVIVVPGNHDARVV-----NGEAFSDQFF----NRYA----VLVGACSSGGWRVIGLDSSVPG------VPLGRLGAEQ 126 (301)
T ss_pred CceEeeCCCCcCCch-----HHHHhhhhhc----ccCc----ceEeeccCCceEEEEecCCCCC------CCCCEECHHH
Confidence 589999999999753 1122221100 0100 1111111 46789999987643 2357899999
Q ss_pred HHHHHHHHhcccccCCCCceEEEEEecCCCccC------CCCchhHHHHHHHhCC--ceEEEeCcccCC
Q 006340 200 LTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA------SSHSGRSLQDIFLKHS--LSAYLCGHLHTR 260 (649)
Q Consensus 200 L~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~------~~~~~~~l~~ll~~~~--v~l~L~GHtH~~ 260 (649)
++|+++.|++.+.. . ...+++++|+|..... ...+...+..++..++ +.++||||.|..
T Consensus 127 ~~~l~~~l~~~~~~-~-~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 127 LDWLEEALAAAPER-A-KDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHhCccc-c-CceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 99999999976521 1 1245777777766421 1224457778888888 999999999987
|
|
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-14 Score=154.72 Aligned_cols=204 Identities=14% Similarity=0.094 Sum_probs=121.2
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHH-HHHHHHHHHHhcC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWME-YQNVMQDVIKRSG 117 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~-Y~~vl~~L~~~~~ 117 (649)
..++|+.++|.=-+.. .-....+.+.+..+..++|||+.+||.++++..+.. ...|+. |.++..+. ++
T Consensus 25 ~~l~F~~vGDwG~g~~---~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~-----Dp~f~~~FE~vY~~~---s~ 93 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK---QQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLN-----DPKWKHCFENVYSEE---SG 93 (394)
T ss_pred CeEEEEEEecCCCCch---hHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCcc-----chhHHhhHhhhccCc---ch
Confidence 4689999999853221 111234444444456799999999999866654221 223543 55555442 11
Q ss_pred CCCceEEEecCCCCCCCCCCCCCchhhhc------------ccccc----cccCCCCccceE--EEEe-----------C
Q 006340 118 LEKSIFYDIRGNHDNFGVPIVGGSFDFFS------------KHSIN----GQLGRKQNVNSV--TVQI-----------G 168 (649)
Q Consensus 118 l~~~p~~~I~GNHD~~~v~~~~~~~~~~~------------~ys~~----~~l~~~~~~~~~--~~~~-----------~ 168 (649)
.-++|||.|.||||..+-.+ +.-+.+. .|+.. .+......+..+ .+.. .
T Consensus 94 ~L~~Pwy~vLGNHDy~Gn~~--AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~ 171 (394)
T PTZ00422 94 DMQIPFFTVLGQADWDGNYN--AELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHK 171 (394)
T ss_pred hhCCCeEEeCCcccccCCch--hhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCC
Confidence 12469999999999865322 1111111 11110 111111111111 1111 1
Q ss_pred CeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCC-c---hhHHHHHH
Q 006340 169 DEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSH-S---GRSLQDIF 244 (649)
Q Consensus 169 ~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~-~---~~~l~~ll 244 (649)
+..+.|+.+|+...-. ..| +....+.+.+||+++|+... +..+++|+++|||+.....-. + ...|..+|
T Consensus 172 ~~~v~fifiDT~~l~~-~~~---~~~~~~~~w~~L~~~L~~a~---k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~PLL 244 (394)
T PTZ00422 172 DMSVAFIFIDTWILSS-SFP---YKKVSERAWQDLKATLEYAP---KIADYIIVVGDKPIYSSGSSKGDSYLSYYLLPLL 244 (394)
T ss_pred CCEEEEEEEECchhcc-cCC---ccccCHHHHHHHHHHHHhhc---cCCCeEEEEecCceeecCCCCCCHHHHHHHHHHH
Confidence 3458999999875431 111 22346789999999997543 234699999999998643211 1 23788999
Q ss_pred HhCCceEEEeCcccCCCC
Q 006340 245 LKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 245 ~~~~v~l~L~GHtH~~~g 262 (649)
++|+|++|+|||.|..+.
T Consensus 245 ~ky~VdlYisGHDH~lq~ 262 (394)
T PTZ00422 245 KDAQVDLYISGYDRNMEV 262 (394)
T ss_pred HHcCcCEEEEccccceEE
Confidence 999999999999998874
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.8e-15 Score=146.85 Aligned_cols=217 Identities=17% Similarity=0.124 Sum_probs=117.6
Q ss_pred ccceEEEEeCCCCCCceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCC-CCCcchhhhhhhhHHHH
Q 006340 25 ADGRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTD-GKSKDLLTMKQNEVEWM 103 (649)
Q Consensus 25 ~~~~~~~~~~~~p~~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd-~~~~~~~~s~Q~e~eW~ 103 (649)
+++.+-.. |..+++.++|+.|+|.= +..+-+-.....-..+..+..+.|||+.+||-+. ++..+....
T Consensus 29 ~eLp~l~~-p~~~dgslsflvvGDwG--r~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp-------- 97 (336)
T KOG2679|consen 29 AELPRLYD-PAKSDGSLSFLVVGDWG--RRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDP-------- 97 (336)
T ss_pred hhhhhhcC-CCCCCCceEEEEEcccc--cCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCCh--------
Confidence 33444333 55566789999999985 3222111112222223335679999999999874 443322111
Q ss_pred HHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCcc--ceEEEEeCCeeEEEEEecCCC
Q 006340 104 EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNV--NSVTVQIGDEKHLFVGFDSTM 181 (649)
Q Consensus 104 ~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~--~~~~~~~~~g~~~fIglD~~~ 181 (649)
.+++..+.+-...-+. .|||.|.||||.++-.... ....+++.+. +.-....+ ++..++..+..+.+...|...
T Consensus 98 ~Fq~sF~nIYT~pSLQ-kpWy~vlGNHDyrGnV~AQ-ls~~l~~~d~--RW~c~rsf~~~ae~ve~f~v~~~~f~~d~~~ 173 (336)
T KOG2679|consen 98 RFQDSFENIYTAPSLQ-KPWYSVLGNHDYRGNVEAQ-LSPVLRKIDK--RWICPRSFYVDAEIVEMFFVDTTPFMDDTFT 173 (336)
T ss_pred hHHhhhhhcccCcccc-cchhhhccCccccCchhhh-hhHHHHhhcc--ceecccHHhhcceeeeeeccccccchhhhee
Confidence 1222222222111143 4999999999998632110 1112332211 00111111 122233333334444444333
Q ss_pred ccCCCCCCCCCCC-----CCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCC----chhHHHHHHHhCCceEE
Q 006340 182 SVGLRGPTNLFGH-----PADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSH----SGRSLQDIFLKHSLSAY 252 (649)
Q Consensus 182 ~pG~~~p~~~~G~-----l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~----~~~~l~~ll~~~~v~l~ 252 (649)
.+ .+.-++..|. +...++.||+..|++.. .+++|+.+|||+-....-. -.+.|..+|++++|++|
T Consensus 174 ~~-~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S~-----a~wkiVvGHh~i~S~~~HG~T~eL~~~LlPiL~~n~VdlY 247 (336)
T KOG2679|consen 174 LC-TDDVYDWRGVLPRVKYLRALLSWLEVALKASR-----AKWKIVVGHHPIKSAGHHGPTKELEKQLLPILEANGVDLY 247 (336)
T ss_pred cc-cccccccccCChHHHHHHHHHHHHHHHHHHhh-----cceEEEecccceehhhccCChHHHHHHHHHHHHhcCCcEE
Confidence 22 1222223332 33578999999998753 4699999999987522111 13568899999999999
Q ss_pred EeCcccCCCC
Q 006340 253 LCGHLHTRFG 262 (649)
Q Consensus 253 L~GHtH~~~g 262 (649)
+|||.|..+.
T Consensus 248 ~nGHDHcLQh 257 (336)
T KOG2679|consen 248 INGHDHCLQH 257 (336)
T ss_pred Eecchhhhhh
Confidence 9999999874
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.7e-15 Score=142.36 Aligned_cols=167 Identities=17% Similarity=0.252 Sum_probs=104.9
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
|+++||+|... ..+++ ..+++.+||+||++||+++.+..+. |+.+ +.+.+ + +.|
T Consensus 1 i~~~sD~H~~~------~~~~~---~~~~~~~~D~vv~~GDl~~~~~~~~------------~~~~-~~l~~---~-~~p 54 (188)
T cd07392 1 ILAISDIHGDV------EKLEA---IILKAEEADAVIVAGDITNFGGKEA------------AVEI-NLLLA---I-GVP 54 (188)
T ss_pred CEEEEecCCCH------HHHHH---HHhhccCCCEEEECCCccCcCCHHH------------HHHH-HHHHh---c-CCC
Confidence 58999999764 13333 2345679999999999999775421 2222 33332 2 369
Q ss_pred EEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHH
Q 006340 123 FYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTE 202 (649)
Q Consensus 123 ~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~w 202 (649)
++.++||||..... ..... . .....+ ..+..+ ++.|+++|+... .|+...|.++++|++|
T Consensus 55 ~~~v~GNHD~~~~~------~~~~~----~---~~~~~~-~~~~~~--~~~~~g~~~~~~----~~~~~~~~~~~~~l~~ 114 (188)
T cd07392 55 VLAVPGNCDTPEIL------GLLTS----A---GLNLHG-KVVEVG--GYTFVGIGGSNP----TPFNTPIELSEEEIVS 114 (188)
T ss_pred EEEEcCCCCCHHHH------Hhhhc----C---cEecCC-CEEEEC--CEEEEEeCCCCC----CCCCCccccCHHHHHH
Confidence 99999999975311 11110 0 000111 123333 488999986531 1223346788999999
Q ss_pred HHHHHhcccccCCCCceEEEEEecCCCcc--C--CC---CchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 203 IDSELSQWNSQSTKPVTKITFGHFPVSFS--A--SS---HSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 203 L~~~L~~~~~~~~~~~~~Ilf~H~P~~~~--~--~~---~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
+ +.+... +.++.|+++|+|+... . .. .+.+++.++++++++++++|||+|...
T Consensus 115 ~-~~l~~~-----~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 115 D-GRLNNL-----LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred h-hhhhcc-----CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 8 444322 2357999999987531 1 11 145789999999999999999999875
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.9e-15 Score=150.74 Aligned_cols=164 Identities=20% Similarity=0.134 Sum_probs=101.8
Q ss_pred HhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHH-HHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCC-CCchhhhcc
Q 006340 70 LSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWM-EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIV-GGSFDFFSK 147 (649)
Q Consensus 70 l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~-~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~-~~~~~~~~~ 147 (649)
++..+||+|+++|||+|.+... ..++|. .|+++.+.+... ....|++.|+||||....... ....+.|++
T Consensus 41 ~~~l~PD~vv~lGDL~d~G~~~------~~~~~~~~~~rf~~i~~~~--~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~ 112 (257)
T cd08163 41 QKQLKPDSTIFLGDLFDGGRDW------ADEYWKKEYNRFMRIFDPS--PGRKMVESLPGNHDIGFGNGVVLPVRQRFEK 112 (257)
T ss_pred HHhcCCCEEEEecccccCCeeC------cHHHHHHHHHHHHHHhcCC--CccceEEEeCCCcccCCCCCCCHHHHHHHHH
Confidence 3457999999999999987532 124564 365555544321 113699999999998321100 001122332
Q ss_pred cccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecC
Q 006340 148 HSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFP 227 (649)
Q Consensus 148 ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P 227 (649)
+ ++. . .+.+.. ++++||++|+....+. ..|.+..+|.+||++.|++.+ ...++|+++|+|
T Consensus 113 ~-----Fg~---~-~~~~~~--~~~~fV~Lds~~l~~~-----~~~~~~~~~~~~l~~~l~~~~----~~~p~ILl~H~P 172 (257)
T cd08163 113 Y-----FGP---T-SRVIDV--GNHTFVILDTISLSNK-----DDPDVYQPPREFLHSFSAMKV----KSKPRILLTHVP 172 (257)
T ss_pred H-----hCC---C-ceEEEE--CCEEEEEEccccccCC-----cccccchhHHHHHHhhhhccC----CCCcEEEEeccc
Confidence 2 111 1 233443 5689999999764432 235677889999999887643 345899999999
Q ss_pred CCccC---------C--C---C---------chhHHHHHHHhCCceEEEeCcccCCC
Q 006340 228 VSFSA---------S--S---H---------SGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 228 ~~~~~---------~--~---~---------~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
+.... + + . +.+.-..||+.-+..++|+||.|.+-
T Consensus 173 lyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C 229 (257)
T cd08163 173 LYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYC 229 (257)
T ss_pred cccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccc
Confidence 87311 0 0 0 11233466666788999999999874
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=145.96 Aligned_cols=192 Identities=19% Similarity=0.271 Sum_probs=110.9
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
+||+++||+|.+.... .+.+++++ +.+++.+||+|+++||+++...... +...+.++++. .+
T Consensus 2 ~~i~~~sDlH~~~~~~--~~~~~~~~-~~~~~~~~d~vl~~GD~~~~~~~~~----------~~~~~~l~~l~-----~~ 63 (223)
T cd07385 2 LRIAHLSDLHLGPFVS--RERLERLV-EKINALKPDLVVLTGDLVDGSVDVL----------ELLLELLKKLK-----AP 63 (223)
T ss_pred CEEEEEeecCCCccCC--HHHHHHHH-HHHhccCCCEEEEcCcccCCcchhh----------HHHHHHHhccC-----CC
Confidence 7999999999987532 24577777 5566789999999999999775421 11223444432 24
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccc-eEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHH
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQL 199 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~q 199 (649)
.|++.++||||.... ....+.+.. +..+..-+.+ ...+..++.++.++++++... .
T Consensus 64 ~~v~~v~GNHD~~~~-----~~~~~~~~l--~~~~v~~L~~~~~~~~~~~~~i~i~G~~~~~~----------------~ 120 (223)
T cd07385 64 LGVYAVLGNHDYYSG-----DEENWIEAL--ESAGITVLRNESVEISVGGATIGIAGVDDGLG----------------R 120 (223)
T ss_pred CCEEEECCCcccccC-----chHHHHHHH--HHcCCEEeecCcEEeccCCeEEEEEeccCccc----------------c
Confidence 699999999998642 111101111 0011111112 344555555667777543210 0
Q ss_pred HHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCCCccc--ee--eeccccc
Q 006340 200 LTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLK--RH--HYMDHNF 275 (649)
Q Consensus 200 L~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g~~l~--~~--h~~~~~~ 275 (649)
.+++.+.++..+ ++.+.|++.|.|..... +.+.++++++|||+|..+.+... .. ......+
T Consensus 121 ~~~~~~~~~~~~----~~~~~I~l~H~P~~~~~-----------~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~ 185 (223)
T cd07385 121 RPDLEKALKGLD----EDDPNILLAHQPDTAEE-----------AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPY 185 (223)
T ss_pred CCCHHHHHhCCC----CCCCEEEEecCCChhHH-----------hcccCccEEEeccCCCCEEeccccccccchhhcCcc
Confidence 122444454432 34589999999875411 13457999999999999853111 11 0122346
Q ss_pred cccccccCCcccc
Q 006340 276 LSQKFFQSNMHQI 288 (649)
Q Consensus 276 ~~G~~~~~~~~~~ 288 (649)
..|.|..++..++
T Consensus 186 ~~G~~~~~~~~~~ 198 (223)
T cd07385 186 DYGLYRKGGSQLY 198 (223)
T ss_pred cceEEEECCEEEE
Confidence 6666666665443
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.3e-14 Score=142.53 Aligned_cols=191 Identities=17% Similarity=0.125 Sum_probs=105.3
Q ss_pred EEEEEcCCCCCCCCCCc-----H----HHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 42 WAVQLSDLHFSVHHPDR-----A----SDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~-----~----~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
||+|+||+|++...... . ..|++++ +.+++.+||+|+++||+++...... .++..+.+.++++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~i~~~GD~~~~~~~~~-------~~~~~~~~~~~~~ 72 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIV-ELAIEEKVDFVLIAGDLFDSNNPSP-------EALELLIEALRRL 72 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHH-HHHHhcCCCEEEECCcccCCCCCCH-------HHHHHHHHHHHHH
Confidence 68999999999764211 1 2355555 4455679999999999999875321 1233444555554
Q ss_pred HHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccc-eEEEEeCCeeEEEEEecCCCccCCCCCCCC
Q 006340 113 IKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPTNL 191 (649)
Q Consensus 113 ~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~~~ 191 (649)
.. .+.|++.++||||......... . ...+............. ......+..++.+++++.....
T Consensus 73 ~~----~~~~v~~~~GNHD~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-------- 137 (223)
T cd00840 73 KE----AGIPVFIIAGNHDSPSRLGALS--P-LLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-------- 137 (223)
T ss_pred HH----CCCCEEEecCCCCCcccccccc--c-hHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH--------
Confidence 32 2469999999999864211100 0 00000000000000111 1233445677888888643211
Q ss_pred CCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCc--hhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 192 FGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHS--GRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 192 ~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~--~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
...+.++++++.+.+.. +..+.|++.|.|......... .....+.+...+++++++||+|..+.
T Consensus 138 ---~~~~~~~~~~~~~~~~~----~~~~~Il~~H~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 138 ---RLRDLLADAELRPRPLD----PDDFNILLLHGGVAGAGPSDSERAPFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred ---HHHHHHHHHHHHhhccC----CCCcEEEEEeeeeecCCCCcccccccCcHhhcCcCCCEEECCCcccCee
Confidence 11223333344443322 345899999998753211111 01233445567899999999998864
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.1e-15 Score=139.42 Aligned_cols=79 Identities=24% Similarity=0.334 Sum_probs=50.1
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
|||++|||+|.+..... . ..+.+.+.....+||+||++||+++.+..... +........... ..+
T Consensus 1 ~ri~~isD~H~~~~~~~--~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~--------~~~~~~~~~~~~----~~~ 65 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDS--D-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSEE--------WRAQFWFFIRLL----NPK 65 (200)
T ss_dssp EEEEEEEBBTTTHHHHC--H-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHHH--------HHHHHHHHHHHH----HTT
T ss_pred CeEEEEcCCCCCCcchh--H-HHHHHHHHhccCCCCEEEeecccccccccccc--------chhhhccchhhh----hcc
Confidence 79999999999874322 1 12333344567899999999999999875321 111100111111 134
Q ss_pred ceEEEecCCCCCCC
Q 006340 121 SIFYDIRGNHDNFG 134 (649)
Q Consensus 121 ~p~~~I~GNHD~~~ 134 (649)
.|++.++||||...
T Consensus 66 ~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 66 IPVYFILGNHDYYS 79 (200)
T ss_dssp TTEEEEE-TTSSHH
T ss_pred ccccccccccccce
Confidence 69999999999964
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=140.66 Aligned_cols=224 Identities=16% Similarity=0.199 Sum_probs=123.2
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
|++++|||+|++...++..+.+.+++.. ...+||.|+++||++|.+..+.... ...+...+.++++.+ .+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~--~~~~~d~l~i~GDl~d~~~g~~~~~----~~~~~~~~~l~~l~~----~g 70 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRG--EARQADALYILGDLFEAWIGDDDPS----PFAREIAAALKALSD----SG 70 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHh--hhccCCEEEEccceeccccccCcCC----HHHHHHHHHHHHHHH----cC
Confidence 6899999999987655433345555521 2468999999999999754321111 011223345566543 23
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCC---------
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNL--------- 191 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~--------- 191 (649)
.|++.++||||... . +.+.+.. +..-..+...++.++.++.+...|..+... ..|..
T Consensus 71 ~~v~~v~GNHD~~~------~-~~~~~~~-----g~~~l~~~~~~~~~g~~i~l~HGd~~~~~d--~~y~~~r~~~r~~~ 136 (241)
T PRK05340 71 VPCYFMHGNRDFLL------G-KRFAKAA-----GMTLLPDPSVIDLYGQRVLLLHGDTLCTDD--KAYQRFRRKVRNPW 136 (241)
T ss_pred CeEEEEeCCCchhh------h-HHHHHhC-----CCEEeCCcEEEEECCEEEEEECCcccccCC--HHHHHHHHHHhCHH
Confidence 69999999999742 1 1221111 111122234466777888888888764321 11110
Q ss_pred ----CCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCCCccce
Q 006340 192 ----FGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKR 267 (649)
Q Consensus 192 ----~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g~~l~~ 267 (649)
+..+..+...++.+.+.+..+..+..+. ......+...+.++++++++++++|||+|....
T Consensus 137 ~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~----- 201 (241)
T PRK05340 137 LQWLFLALPLSIRLRIAAKMRAKSKAANQSKS----------LEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI----- 201 (241)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCc----------ccccCCCHHHHHHHHHHhCCCEEEECcccCcce-----
Confidence 1122223334444444332111000011 001122346788999999999999999997641
Q ss_pred eeeccccccccccccCCccccccCCcccccCCCCCCCccceeeecccccccceEEEEEcCCEEEEEE
Q 006340 268 HHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAIDRGHISYVD 334 (649)
Q Consensus 268 ~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g~~ele~~dw~~~r~yrvl~iD~~~~sf~d 334 (649)
|....+ ..+...+.+|||... +.++.+|++.++...
T Consensus 202 -~~~~~~----------------------------~~~~~~~~lgdw~~~--~~~~~~~~~~~~~~~ 237 (241)
T PRK05340 202 -HQLQAG----------------------------GQPATRIVLGDWHEQ--GSVLKVDADGVELIP 237 (241)
T ss_pred -eeccCC----------------------------CcceEEEEeCCCCCC--CeEEEEECCceEEEe
Confidence 111100 011235788999654 555688888877653
|
|
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.4e-13 Score=138.61 Aligned_cols=260 Identities=20% Similarity=0.248 Sum_probs=141.1
Q ss_pred EEEeCCCCCCceEEEEEcCCCCCCCC--------CCc-----HHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhh
Q 006340 30 VIQLREGPEHVIWAVQLSDLHFSVHH--------PDR-----ASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMK 96 (649)
Q Consensus 30 ~~~~~~~p~~~~~fv~ISDlHls~~~--------~~~-----~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~ 96 (649)
..+++...++.|||+|++|+|++... |.. ...-.+++++.++.++||+|++|||++++... ...+
T Consensus 43 ~~~lr~~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t-~Da~- 120 (379)
T KOG1432|consen 43 RLKLRFREDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST-QDAA- 120 (379)
T ss_pred ceeeeecCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc-HhHH-
Confidence 34455666778999999999998762 111 11235778888888999999999999988432 1111
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcc--ccccc------ccC-CCCccceEEEEe
Q 006340 97 QNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK--HSING------QLG-RKQNVNSVTVQI 167 (649)
Q Consensus 97 Q~e~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~--ys~~~------~l~-~~~~~~~~~~~~ 167 (649)
..+++.+.+. .-.++||..+.||||..+........++.++ |+-.+ ... ..+. +++.+..
T Consensus 121 ---------~sl~kAvaP~-I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~-gnyn~~i 189 (379)
T KOG1432|consen 121 ---------TSLMKAVAPA-IDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLSQVNPPDGHMYIIDGF-GNYNLQI 189 (379)
T ss_pred ---------HHHHHHhhhH-hhcCCCeEEEecccccccccCHHHHHHHHhcCCCccccCCCcccceeeeecc-cceEEEe
Confidence 1233333322 1246899999999998653211001111111 11000 000 0000 0111111
Q ss_pred ---------CCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhccccc--CCCCceEEEEEecCCCcc----C
Q 006340 168 ---------GDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQ--STKPVTKITFGHFPVSFS----A 232 (649)
Q Consensus 168 ---------~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~--~~~~~~~Ilf~H~P~~~~----~ 232 (649)
+.....+..+|+..++.-.+-...++.+...|++||+..-++-... .-++.+-+++.|+|+... .
T Consensus 190 ~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~ 269 (379)
T KOG1432|consen 190 EGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELES 269 (379)
T ss_pred ccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccC
Confidence 1112234445554433211111234578899999999877431110 112236899999997620 0
Q ss_pred -------------CCCchhHHHHHHH-hCCceEEEeCcccCCCCC-ccceeeeccccccccccccCCccccccCCccccc
Q 006340 233 -------------SSHSGRSLQDIFL-KHSLSAYLCGHLHTRFGK-NLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCS 297 (649)
Q Consensus 233 -------------~~~~~~~l~~ll~-~~~v~l~L~GHtH~~~g~-~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs 297 (649)
.+.-..++.+.|. +-+|++++|||-|.+... ..+. . ..-|.
T Consensus 270 ~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~----------------~--------~wlCy 325 (379)
T KOG1432|consen 270 KTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELKG----------------E--------LWLCY 325 (379)
T ss_pred CCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecccCC----------------e--------EEEEe
Confidence 1112346777777 667999999999988742 1111 0 22354
Q ss_pred CCCCCCCccceeeecccccccceEEEEEcCCEEE
Q 006340 298 SGAPSIGEFWEWEMGDWRKSRAMRILAIDRGHIS 331 (649)
Q Consensus 298 ~~~~~~~g~~ele~~dw~~~r~yrvl~iD~~~~s 331 (649)
.+....+|+- .+ +-.|+-||+.+|...-.
T Consensus 326 gGgaGyggYg---~~--gw~Rr~Rv~e~d~~~~~ 354 (379)
T KOG1432|consen 326 GGGAGYGGYG---IG--GWERRARVFELDLNKDR 354 (379)
T ss_pred cCCCccCCcC---cC--CcccceEEEEccccccc
Confidence 4443323321 11 13689999999987664
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=132.01 Aligned_cols=178 Identities=12% Similarity=0.158 Sum_probs=107.8
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
..|++.+||+|-. ...+++++ +..++.+||+|+++||+++.+... +.|.++++.+.+ +
T Consensus 4 ~~kIl~iSDiHgn------~~~le~l~-~~~~~~~~D~vv~~GDl~~~g~~~-----------~~~~~~l~~l~~---l- 61 (224)
T cd07388 4 VRYVLATSNPKGD------LEALEKLV-GLAPETGADAIVLIGNLLPKAAKS-----------EDYAAFFRILGE---A- 61 (224)
T ss_pred eeEEEEEEecCCC------HHHHHHHH-HHHhhcCCCEEEECCCCCCCCCCH-----------HHHHHHHHHHHh---c-
Confidence 5799999999942 34677777 445567899999999999977321 124466666654 2
Q ss_pred CceEEEecCCCCCCCCCCCCCchhhhcc-cccccccCC-CCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCH
Q 006340 120 KSIFYDIRGNHDNFGVPIVGGSFDFFSK-HSINGQLGR-KQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPAD 197 (649)
Q Consensus 120 ~~p~~~I~GNHD~~~v~~~~~~~~~~~~-ys~~~~l~~-~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~ 197 (649)
..|++.|+||||.. + .++.++ +........ ....+. ..... +.+.|+|++..... | ...++
T Consensus 62 ~~pv~~V~GNhD~~-v------~~~l~~~~~~~~~~p~~~~lh~~-~~~~~-g~~~~~GlGGs~~~----~----~e~sE 124 (224)
T cd07388 62 HLPTFYVPGPQDAP-L------WEYLREAYNAELVHPEIRNVHET-FAFWR-GPYLVAGVGGEIAD----E----GEPEE 124 (224)
T ss_pred CCceEEEcCCCChH-H------HHHHHHHhcccccCccceecCCC-eEEec-CCeEEEEecCCcCC----C----CCcCH
Confidence 25999999999974 1 111121 100000000 001111 12222 45889999855411 1 34577
Q ss_pred HHH----HHHHH-HHhcccccCCCCceEEEEEecCCCcc-CCCCchhHHHHHHHhCCceEEEeCccc
Q 006340 198 QLL----TEIDS-ELSQWNSQSTKPVTKITFGHFPVSFS-ASSHSGRSLQDIFLKHSLSAYLCGHLH 258 (649)
Q Consensus 198 ~qL----~wL~~-~L~~~~~~~~~~~~~Ilf~H~P~~~~-~~~~~~~~l~~ll~~~~v~l~L~GHtH 258 (649)
+++ +|+.+ .|+.... . .....|+++|.|+.-. ..-...+.+++++++++-.+++|||.|
T Consensus 125 ~e~~~~~~~~~~~~l~~~~~-~-~~~~~VLv~H~PP~g~g~~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 125 HEALRYPAWVAEYRLKALWE-L-KDYRKVFLFHTPPYHKGLNEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred HHHhhhhhhHHHHHHHHHHh-C-CCCCeEEEECCCCCCCCCCccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 762 45433 2222211 1 2348999999998643 123345789999999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=129.84 Aligned_cols=76 Identities=29% Similarity=0.452 Sum_probs=52.9
Q ss_pred EEEEcCCCCCCCCCCcHHH----HHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 43 AVQLSDLHFSVHHPDRASD----FKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~----l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
|+||||+|++......... +++++ +.++..+||+|+++||+++.+.. .+|+.+.+.++++...
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~-~~~~~~~~d~vi~~GDl~~~~~~---------~~~~~~~~~~~~l~~~--- 67 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLL-AEIKALDPDLVVITGDLTQRGLP---------EEFEEAREFLDALPAP--- 67 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHH-HHHhccCCCEEEECCCCCCCCCH---------HHHHHHHHHHHHcccc---
Confidence 5899999998865322111 23344 45567899999999999998753 2355555666665321
Q ss_pred CCceEEEecCCCCC
Q 006340 119 EKSIFYDIRGNHDN 132 (649)
Q Consensus 119 ~~~p~~~I~GNHD~ 132 (649)
..|++.++||||.
T Consensus 68 -~~~~~~v~GNHD~ 80 (144)
T cd07400 68 -LEPVLVVPGNHDV 80 (144)
T ss_pred -CCcEEEeCCCCeE
Confidence 1499999999996
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-13 Score=137.21 Aligned_cols=184 Identities=16% Similarity=0.185 Sum_probs=100.8
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCceE
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIF 123 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~ 123 (649)
++|||+|++...++..+.+.+++.+.. .+||.|+++||++|.+..+.... ...+...+.++++.+ .+.|+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~--~~~d~lii~GDi~d~~~~~~~~~----~~~~~~~~~l~~L~~----~~~~v 71 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEA--RKADALYILGDLFEAWIGDDDPS----TLARSVAQAIRQVSD----QGVPC 71 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhh--ccCCEEEEcCceeccccCCCCCC----HHHHHHHHHHHHHHH----CCCeE
Confidence 799999999755433334445553322 28999999999999654211111 111233445666543 13699
Q ss_pred EEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCC-------------
Q 006340 124 YDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTN------------- 190 (649)
Q Consensus 124 ~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~------------- 190 (649)
|.++||||... + ..+.+. .+..-..+....+.++.++.++..|..+... ..|.
T Consensus 72 ~~v~GNHD~~~-----~--~~~~~~-----~gi~~l~~~~~~~~~g~~ill~HGd~~~~~d--~~y~~~r~~~r~~~~~~ 137 (231)
T TIGR01854 72 YFMHGNRDFLI-----G--KRFARE-----AGMTLLPDPSVIDLYGQKVLLMHGDTLCTDD--TAYQAFRAKVHQPWLQR 137 (231)
T ss_pred EEEcCCCchhh-----h--HHHHHH-----CCCEEECCCEEEEECCEEEEEEcCccccCCC--HHHHHHHHHHhCHHHHH
Confidence 99999999742 1 111111 1111111234456678889898888775321 1111
Q ss_pred CCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 191 LFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 191 ~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
.+..+..+...++.+.+.+..++.+..++..++. .+...+.++++++++++++|||+|...
T Consensus 138 ~~~~l~~~~r~~l~~~~~~~s~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~i~GHtH~~~ 198 (231)
T TIGR01854 138 LFLHLPLAVRVKLARKIRAESRADKQMKSQDIMD----------VNPAEVAAVMRRYGVDRLIHGHTHRPA 198 (231)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCCCcchhhC----------CCHHHHHHHHHHcCCCEEEECCccCcc
Confidence 0112222344555555544321111111111111 234567888888999999999999775
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.5e-13 Score=134.53 Aligned_cols=118 Identities=20% Similarity=0.251 Sum_probs=77.2
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCceE
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIF 123 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~ 123 (649)
++|||+|+++..|...+-|.+|+++ .+.++|.+++.||++|.+..+.... +..+++.+++...+. +++++
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~--~a~~ad~lyilGDifd~w~g~~~~~-------~~~~~V~~~l~~~a~-~G~~v 70 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLRE--EAAQADALYILGDIFDGWIGDDEPP-------QLHRQVAQKLLRLAR-KGTRV 70 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHh--ccccCcEEEEechhhhhhhcCCccc-------HHHHHHHHHHHHHHh-cCCeE
Confidence 4799999998888777777788743 2347799999999999886543111 234455555555443 56899
Q ss_pred EEecCCCCCCCCCCCCCchhhhcccccccccC-CCCccceEEEEeCCeeEEEEEecCCCcc
Q 006340 124 YDIRGNHDNFGVPIVGGSFDFFSKHSINGQLG-RKQNVNSVTVQIGDEKHLFVGFDSTMSV 183 (649)
Q Consensus 124 ~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~-~~~~~~~~~~~~~~g~~~fIglD~~~~p 183 (649)
|+++||||.. ..+.+..- .+ ..........+.++.++.++..|..+..
T Consensus 71 ~~i~GN~Dfl-------l~~~f~~~-----~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~ 119 (237)
T COG2908 71 YYIHGNHDFL-------LGKRFAQE-----AGGMTLLPDPIVLDLYGKRILLAHGDTFCTD 119 (237)
T ss_pred EEecCchHHH-------HHHHHHhh-----cCceEEcCcceeeeecCcEEEEEeCCcccch
Confidence 9999999953 11222211 11 1111223556677889999999988754
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.8e-11 Score=128.35 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=40.0
Q ss_pred CceEEEEEcCCCCCCCC--CCc----HHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcch
Q 006340 39 HVIWAVQLSDLHFSVHH--PDR----ASDFKRIVGPALSMISPSLVLITGDLTDGKSKDL 92 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~--~~~----~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~ 92 (649)
+.|||+|+||+|++... +.+ ...|++++ +.+...+||+|+++|||+|...+..
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil-~~a~~~~vD~VLiaGDLFd~~~Ps~ 60 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVL-QIAKEQDVDMILLGGDLFHENKPSR 60 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHH-HHHHHcCCCEEEECCccCCCCCCCH
Confidence 57999999999998542 222 23466776 4455789999999999999987653
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.3e-12 Score=121.07 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=81.3
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
|+++||+|.+...... .+.+..+..+||+++++||+++...... |. ...... ....|
T Consensus 1 ~~~iSDlH~~~~~~~~------~~~~~~~~~~~d~li~~GDi~~~~~~~~---------~~---~~~~~~-----~~~~~ 57 (166)
T cd07404 1 IQYLSDLHLEFEDNLA------DLLNFPIAPDADILVLAGDIGYLTDAPR---------FA---PLLLAL-----KGFEP 57 (166)
T ss_pred CceEccccccCccccc------cccccCCCCCCCEEEECCCCCCCcchHH---------HH---HHHHhh-----cCCcc
Confidence 5789999997643221 1112234678999999999998764321 11 111111 12469
Q ss_pred EEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHH
Q 006340 123 FYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTE 202 (649)
Q Consensus 123 ~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~w 202 (649)
++.++||||.. +.|+|.. ... .+...++++++|
T Consensus 58 v~~v~GNHD~~--------------------------------------~~~~G~~--~w~-------~~~~~~~~~~~~ 90 (166)
T cd07404 58 VIYVPGNHEFY--------------------------------------VRIIGTT--LWS-------DISLFGEAAARM 90 (166)
T ss_pred EEEeCCCcceE--------------------------------------EEEEeee--ccc-------ccCccchHHHHh
Confidence 99999999984 1122221 000 000122333333
Q ss_pred HHHHHhcccccCCCCceEEEEEecCCCccCC-------CCc---hhHHHHHHHhCCceEEEeCcccCCC
Q 006340 203 IDSELSQWNSQSTKPVTKITFGHFPVSFSAS-------SHS---GRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 203 L~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~-------~~~---~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
.-++++ +++|+++|+|+..... ..+ .+.+.++++++++++++|||+|...
T Consensus 91 ~~~d~~---------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 91 RMNDFR---------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred CCCCCC---------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 333221 3789999998763211 111 2347777888899999999999885
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-11 Score=127.35 Aligned_cols=88 Identities=24% Similarity=0.269 Sum_probs=61.6
Q ss_pred ceEEEEeCCCCC--CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCC-CCcchhhhhhhhHHHH
Q 006340 27 GRRVIQLREGPE--HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDG-KSKDLLTMKQNEVEWM 103 (649)
Q Consensus 27 ~~~~~~~~~~p~--~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~-~~~~~~~s~Q~e~eW~ 103 (649)
.++.+..|+.+. ..++++|+||+|...+. ....+.+ ..+....||+|++|||+++. ..+. +.
T Consensus 29 ~~~~i~~~~~~~~~~~~~iv~lSDlH~~~~~----~~~~~~~-~~i~~~~~DlivltGD~~~~~~~~~----------~~ 93 (284)
T COG1408 29 VKLTILTPKLPASLQGLKIVQLSDLHSLPFR----EEKLALL-IAIANELPDLIVLTGDYVDGDRPPG----------VA 93 (284)
T ss_pred EEEEeecCCCCcccCCeEEEEeehhhhchhh----HHHHHHH-HHHHhcCCCEEEEEeeeecCCCCCC----------HH
Confidence 456677777775 35899999999999876 2334455 33456677999999999996 3322 12
Q ss_pred HHHHHHHHHHHhcCCCCceEEEecCCCCCCC
Q 006340 104 EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 104 ~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~ 134 (649)
...+.++.+.+ ..++|.+.||||...
T Consensus 94 ~~~~~L~~L~~-----~~gv~av~GNHd~~~ 119 (284)
T COG1408 94 ALALFLAKLKA-----PLGVFAVLGNHDYGV 119 (284)
T ss_pred HHHHHHHhhhc-----cCCEEEEeccccccc
Confidence 23455666543 348999999999864
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-10 Score=123.63 Aligned_cols=82 Identities=15% Similarity=0.116 Sum_probs=52.6
Q ss_pred eEEEEEcCCCCCCCC--CCcH----HHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHH-HHHHHH
Q 006340 41 IWAVQLSDLHFSVHH--PDRA----SDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQN-VMQDVI 113 (649)
Q Consensus 41 ~~fv~ISDlHls~~~--~~~~----~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~-vl~~L~ 113 (649)
|||+|+||+|++... +... ..+++++ +.+++.+||+|+++||++|........ .....++ +++.+.
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii-~~a~~~~vD~VliaGDlfD~~~~~~~~------~~~~~~~~l~~~L~ 73 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAI-EYSKAHGITTWIQLGDTFDVRKAITQN------TMNFVREKIFDLLK 73 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHH-HHHHHcCCCEEEECCcccCCCCCCCHH------HHHHHHHHHHHHHH
Confidence 699999999998653 2112 2345555 445577999999999999986422111 1112222 344443
Q ss_pred HhcCCCCceEEEecCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~ 133 (649)
+ .++|++.++||||..
T Consensus 74 ~----~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 74 E----AGITLHVLVGNHDMY 89 (340)
T ss_pred H----CCCeEEEEccCCCcc
Confidence 3 247999999999974
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.21 E-value=3e-10 Score=124.52 Aligned_cols=83 Identities=24% Similarity=0.306 Sum_probs=57.6
Q ss_pred eEEEEEcCCCCC-CCC--CCcHHHHHHHHH---HHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFS-VHH--PDRASDFKRIVG---PALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIK 114 (649)
Q Consensus 41 ~~fv~ISDlHls-~~~--~~~~~~l~~~i~---~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~ 114 (649)
|||+|+||+|++ ... +.+.+++.+++. +.+...++|+||++|||+|...+....-. .+.+.++++..
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~-------~~~~~l~~l~~ 73 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALK-------LFLEALRRLKD 73 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHH-------HHHHHHHHhcc
Confidence 699999999999 332 455555444433 33456799999999999999876543221 23345555443
Q ss_pred hcCCCCceEEEecCCCCCCC
Q 006340 115 RSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 115 ~~~l~~~p~~~I~GNHD~~~ 134 (649)
.++|+|.|.||||...
T Consensus 74 ----~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 74 ----AGIPVVVIAGNHDSPS 89 (390)
T ss_pred ----CCCcEEEecCCCCchh
Confidence 3579999999999964
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-10 Score=113.88 Aligned_cols=197 Identities=15% Similarity=0.128 Sum_probs=98.9
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhh---------------hhhhHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTM---------------KQNEVEWMEY 105 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s---------------~Q~e~eW~~Y 105 (649)
=+++.|||+|-. .+.+++++ +.+...+||+++++|||..+.....+.. ...-.+.++|
T Consensus 6 ~kilA~s~~~g~------~e~l~~l~-~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 6 RKILAISNFRGD------FELLERLV-EVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp -EEEEEE--TT-------HHHHHHHH-HHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred hhheeecCcchH------HHHHHHHH-hhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 389999999843 35677777 5566669999999999987654322111 0001123456
Q ss_pred HHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccc-eEEEEeCCeeEEEEEecCCCccC
Q 006340 106 QNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVG 184 (649)
Q Consensus 106 ~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG 184 (649)
.++++.|... ..|+++||||||... ..+++.-.... .-+.+..+ .-++..-.|.|.++|+......+
T Consensus 79 ~~ff~~L~~~----~~p~~~vPG~~Dap~-------~~~lr~a~~~e-~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~ 146 (255)
T PF14582_consen 79 DKFFRILGEL----GVPVFVVPGNMDAPE-------RFFLREAYNAE-IVTPHIHNVHESFFFWKGEYLVAGMGGEITDD 146 (255)
T ss_dssp HHHHHHHHCC-----SEEEEE--TTS-SH-------HHHHHHHHHCC-CC-TTEEE-CTCEEEETTTEEEEEE-SEEESS
T ss_pred HHHHHHHHhc----CCcEEEecCCCCchH-------HHHHHHHhccc-eeccceeeeeeeecccCCcEEEEecCccccCC
Confidence 6777777642 469999999999852 23443322111 11111111 01122224579999987655433
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCc-cCCC-CchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 185 LRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSF-SASS-HSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 185 ~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~-~~~~-~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
.+.. .+.-.+---..++..+.|+++ ++.+.|++.|.|+.. .... ...+.+.+++++|+-.+++|||.|...+
T Consensus 147 ~~~~-~~~LrYP~weaey~lk~l~el-----k~~r~IlLfhtpPd~~kg~~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~ 220 (255)
T PF14582_consen 147 QREE-EFKLRYPAWEAEYSLKFLREL-----KDYRKILLFHTPPDLHKGLIHVGSAAVRDLIKTYNPDIVLCGHIHESHG 220 (255)
T ss_dssp S-BC-SSS-EEEHHHHHHHHGGGGGC-----TSSEEEEEESS-BTBCTCTBTTSBHHHHHHHHHH--SEEEE-SSS-EE-
T ss_pred Cccc-cccccchHHHHHHHHHHHHhc-----ccccEEEEEecCCccCCCcccccHHHHHHHHHhcCCcEEEecccccchh
Confidence 3221 111111112333334444443 234788889988721 1111 1346899999999999999999997754
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.18 E-value=4e-10 Score=114.45 Aligned_cols=181 Identities=18% Similarity=0.139 Sum_probs=96.9
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
+|+++|||+|..... ..+ +.++..+||+|+++||+++... ++++.+.+ + .
T Consensus 1 ~rIa~isDiHg~~~~--------~~~-~~l~~~~pD~Vl~~GDi~~~~~-----------------~~~~~l~~---l-~ 50 (238)
T cd07397 1 LRIAIVGDVHGQWDL--------EDI-KALHLLQPDLVLFVGDFGNESV-----------------QLVRAISS---L-P 50 (238)
T ss_pred CEEEEEecCCCCchH--------HHH-HHHhccCCCEEEECCCCCcChH-----------------HHHHHHHh---C-C
Confidence 589999999965321 111 3456779999999999986421 23444443 2 2
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccc--eEEEEeCCeeEEEEEecCCCccCCCCCC-----CCCC
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN--SVTVQIGDEKHLFVGFDSTMSVGLRGPT-----NLFG 193 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~--~~~~~~~~g~~~fIglD~~~~pG~~~p~-----~~~G 193 (649)
.|++.++||||.........+.+.+. +++...+... .-...++.-++.++|--....+|...-. ..||
T Consensus 51 ~p~~~V~GNHD~~~~~~~~~k~~~l~-----~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fg 125 (238)
T cd07397 51 LPKAVILGNHDAWYDATFRKKGDRVQ-----EQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYG 125 (238)
T ss_pred CCeEEEcCCCcccccccccchHHHHH-----HHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhC
Confidence 48999999999864211000122222 1111111110 1112233336888888777766643221 1244
Q ss_pred CCCH-HHHHHHHHHHhcccccCCCCceEEEEEecCCCccC-CC-------------C-chhHHHHHHHh----CCceEEE
Q 006340 194 HPAD-QLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA-SS-------------H-SGRSLQDIFLK----HSLSAYL 253 (649)
Q Consensus 194 ~l~~-~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~-~~-------------~-~~~~l~~ll~~----~~v~l~L 253 (649)
..+- +-++.+-+.++... .....|+++|.++.-.. .+ + .-++|.+.+.+ ..+.+++
T Consensus 126 i~s~~eA~~~ive~~~~~~----~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~ 201 (238)
T cd07397 126 VISLEESAQRIIAAAKKAP----PDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVV 201 (238)
T ss_pred CCCHHHHHHHHHHHhhhcC----CCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEE
Confidence 2222 22333333332221 33578999998765321 00 0 11356444443 2389999
Q ss_pred eCcccCC
Q 006340 254 CGHLHTR 260 (649)
Q Consensus 254 ~GHtH~~ 260 (649)
+||+|..
T Consensus 202 fGH~H~~ 208 (238)
T cd07397 202 FGHMHHR 208 (238)
T ss_pred eCCccCc
Confidence 9999977
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.8e-10 Score=108.83 Aligned_cols=60 Identities=30% Similarity=0.536 Sum_probs=40.2
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||++++||+|... ..++++++. + .+||+|+++||+++. . ++++.+++
T Consensus 1 Mki~~~sD~H~~~------~~~~~~~~~-~--~~~d~vi~~GDi~~~---~---------------~~~~~~~~------ 47 (156)
T PF12850_consen 1 MKIAVISDLHGNL------DALEAVLEY-I--NEPDFVIILGDIFDP---E---------------EVLELLRD------ 47 (156)
T ss_dssp EEEEEEE--TTTH------HHHHHHHHH-H--TTESEEEEES-SCSH---H---------------HHHHHHHH------
T ss_pred CEEEEEeCCCCCh------hHHHHHHHH-h--cCCCEEEECCCchhH---H---------------HHHHHHhc------
Confidence 7999999999954 247777743 4 469999999999982 1 34555443
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
.|++.|+||||..
T Consensus 48 ~~~~~v~GNHD~~ 60 (156)
T PF12850_consen 48 IPVYVVRGNHDNW 60 (156)
T ss_dssp HEEEEE--CCHST
T ss_pred CCEEEEeCCcccc
Confidence 2899999999964
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.7e-09 Score=104.91 Aligned_cols=177 Identities=21% Similarity=0.260 Sum_probs=107.0
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCC--CCCCcchhhhhhhhHHHHHHHHHHHHHHHhcC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLT--DGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSG 117 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLt--d~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~ 117 (649)
.||++++||+|.+. ..+++++ ......++|+++++|||+ +-+.+.. +. ++ ..++.+..
T Consensus 3 ~mkil~vtDlHg~~------~~~~k~~-~~~~~~~~D~lviaGDlt~~~~~~~~~--~~---~~-----~~~e~l~~--- 62 (226)
T COG2129 3 KMKILAVTDLHGSE------DSLKKLL-NAAADIRADLLVIAGDLTYFHFGPKEV--AE---EL-----NKLEALKE--- 62 (226)
T ss_pred cceEEEEeccccch------HHHHHHH-HHHhhccCCEEEEecceehhhcCchHH--HH---hh-----hHHHHHHh---
Confidence 58999999999875 2467777 555677999999999999 5444321 11 11 00333332
Q ss_pred CCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCH
Q 006340 118 LEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPAD 197 (649)
Q Consensus 118 l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~ 197 (649)
...|++.++||-|...+. +...+.. .. .. .-.... +.+.|+++--.. ..|+|....+++
T Consensus 63 -~~~~v~avpGNcD~~~v~------~~l~~~~------~~-v~-~~v~~i--~~~~~~G~Ggsn----~tp~nt~~e~~E 121 (226)
T COG2129 63 -LGIPVLAVPGNCDPPEVI------DVLKNAG------VN-VH-GRVVEI--GGYGFVGFGGSN----PTPFNTPREFSE 121 (226)
T ss_pred -cCCeEEEEcCCCChHHHH------HHHHhcc------cc-cc-cceEEe--cCcEEEEecccC----CCCCCCccccCH
Confidence 247999999999886432 1122111 00 11 112222 457777753222 135566677777
Q ss_pred HHH-HHHHHHHhcccccCCCCceEEEEEecCCCcc---CCC----CchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 198 QLL-TEIDSELSQWNSQSTKPVTKITFGHFPVSFS---ASS----HSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 198 ~qL-~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~---~~~----~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
+++ ..+++.+++.. + ...|+..|.|+... ... ...+++++++++.+..+.+|||.|-..|
T Consensus 122 ~~I~s~l~~~v~~~~----~-~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 122 DEIYSKLKSLVKKAD----N-PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred HHHHHHHHHHHhccc----C-cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 653 34444444332 1 11299999987631 111 1236899999999999999999997654
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.6e-10 Score=105.13 Aligned_cols=182 Identities=19% Similarity=0.216 Sum_probs=101.2
Q ss_pred eEEEEEcCCCCCCCCCCcHH--------HHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHPDRAS--------DFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQD 111 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~--------~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~ 111 (649)
|++..|+|+|++...|+..+ .=+++++.......| |.|++.|||..+..-+. +. .-++-
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~e--a~----------~Dl~~ 68 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEE--AE----------EDLRF 68 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechh--hh----------hhhhh
Confidence 57889999999877654321 224555444444444 89999999998765321 10 11222
Q ss_pred HHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccc-eEEEEeCCeeEEEEEecCCCccCCCCCCC
Q 006340 112 VIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPTN 190 (649)
Q Consensus 112 L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~~ 190 (649)
+ ..++++ -|.++||||.+-. +.....+.+.. .-.+.+ .+. ..++.++|.-.-..|..+
T Consensus 69 i---~~LPG~-K~m~rGNHDYWw~-s~skl~n~lp~--------~l~~~n~~f~----l~n~aI~G~RgW~s~~~~---- 127 (230)
T COG1768 69 I---GDLPGT-KYMIRGNHDYWWS-SISKLNNALPP--------ILFYLNNGFE----LLNYAIVGVRGWDSPSFD---- 127 (230)
T ss_pred h---hcCCCc-EEEEecCCccccc-hHHHHHhhcCc--------hHhhhcccee----EeeEEEEEeecccCCCCC----
Confidence 2 225654 4569999999842 11011111110 000111 111 234777776544433211
Q ss_pred CCCCCCHH-------HHHHHHH-HHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 191 LFGHPADQ-------LLTEIDS-ELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 191 ~~G~l~~~-------qL~wL~~-~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
...++++ ++..|+. ..++.+ +.-...|+|.|||...... .+..+.++++++++..++.||+|...
T Consensus 128 -~e~~te~Deki~~RE~~RLrlsa~a~l~---k~~~~fivM~HYPP~s~~~--t~~~~sevlee~rv~~~lyGHlHgv~ 200 (230)
T COG1768 128 -SEPLTEQDEKIFLREIGRLRLSADAALP---KGVSKFIVMTHYPPFSDDG--TPGPFSEVLEEGRVSKCLYGHLHGVP 200 (230)
T ss_pred -cCccchhHHHHHHHHHHHHHHHHHHhcc---cCcCeEEEEEecCCCCCCC--CCcchHHHHhhcceeeEEeeeccCCC
Confidence 1113332 3334443 223332 2335799999999865322 24579999999999999999999775
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.4e-10 Score=106.55 Aligned_cols=82 Identities=22% Similarity=0.324 Sum_probs=49.8
Q ss_pred EEEcCCCCCCCCCCc-------HHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhc
Q 006340 44 VQLSDLHFSVHHPDR-------ASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRS 116 (649)
Q Consensus 44 v~ISDlHls~~~~~~-------~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~ 116 (649)
+.|||+|+....... ...+.+.....++..+||+|+++||+++...... ..+|..+...+.++.+.
T Consensus 1 ~~isD~HL~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~pd~vv~~GDl~~~~~~~~------~~~~~~~~~~~~~~~~~- 73 (156)
T cd08165 1 MFLADTHLLGSILGHWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWST------DEEWEDYVERFKKMFGH- 73 (156)
T ss_pred CccccchhcCCcccHHHHHHhhhHHHHHHHHHHHHhcCCCEEEECCCCCCCCccCC------HHHHHHHHHHHHHHhcc-
Confidence 368999995432211 1123334445567789999999999998765321 13454433333332211
Q ss_pred CCCCceEEEecCCCCCC
Q 006340 117 GLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 117 ~l~~~p~~~I~GNHD~~ 133 (649)
....|++.++||||..
T Consensus 74 -~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 74 -PPDLPLHVVVGNHDIG 89 (156)
T ss_pred -CCCCeEEEEcCCCCcC
Confidence 1246999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.3e-10 Score=102.83 Aligned_cols=63 Identities=27% Similarity=0.306 Sum_probs=41.6
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
||+++||+|.... .++..+||+++++||+++.+... + |+.+++.+.+ ++..
T Consensus 1 ~i~~isD~H~~~~--------------~~~~~~~D~vi~~GD~~~~~~~~---------~---~~~~~~~l~~---~~~~ 51 (135)
T cd07379 1 RFVCISDTHSRHR--------------TISIPDGDVLIHAGDLTERGTLE---------E---LQKFLDWLKS---LPHP 51 (135)
T ss_pred CEEEEeCCCCCCC--------------cCcCCCCCEEEECCCCCCCCCHH---------H---HHHHHHHHHh---CCCC
Confidence 5899999997642 12346899999999999876532 1 2233333333 2223
Q ss_pred eEEEecCCCCCC
Q 006340 122 IFYDIRGNHDNF 133 (649)
Q Consensus 122 p~~~I~GNHD~~ 133 (649)
+++.++||||..
T Consensus 52 ~~~~v~GNHD~~ 63 (135)
T cd07379 52 HKIVIAGNHDLT 63 (135)
T ss_pred eEEEEECCCCCc
Confidence 467899999974
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.1e-09 Score=111.04 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=57.6
Q ss_pred eEEEEEcCCCCCCCC--CCcHH----HHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHH--PDRAS----DFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIK 114 (649)
Q Consensus 41 ~~fv~ISDlHls~~~--~~~~~----~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~ 114 (649)
|||+|+||+|++... ..+.. .|++++ +.+.+.+||+|+++||++|....... ..+.+.+.++++.+
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~-~~~~~~~~D~lli~GDi~d~~~p~~~-------~~~~~~~~l~~l~~ 72 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLL-EFAKAEQIDALLVAGDVFDTANPPAE-------AQELFNAFFRNLSD 72 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHH-HHHHHcCCCEEEECCccCCCCCCCHH-------HHHHHHHHHHHHHh
Confidence 699999999998753 22222 344554 44556789999999999998764321 12335566777654
Q ss_pred hcCCCCceEEEecCCCCCCC
Q 006340 115 RSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 115 ~~~l~~~p~~~I~GNHD~~~ 134 (649)
. .++|++.++||||...
T Consensus 73 ~---~~i~v~~i~GNHD~~~ 89 (253)
T TIGR00619 73 A---NPIPIVVISGNHDSAQ 89 (253)
T ss_pred c---CCceEEEEccCCCChh
Confidence 2 2369999999999853
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.9e-09 Score=118.14 Aligned_cols=208 Identities=13% Similarity=0.099 Sum_probs=126.5
Q ss_pred ceEEEEEcCCCCCCCC----------C-----C----------------------cHHHHHHHHHHHHhccC-CcEEEEc
Q 006340 40 VIWAVQLSDLHFSVHH----------P-----D----------------------RASDFKRIVGPALSMIS-PSLVLIT 81 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~----------~-----~----------------------~~~~l~~~i~~~l~~~k-PD~VIit 81 (649)
.+||+||||+|..... | . ...-++++++...+..+ +|+|+.|
T Consensus 138 ~~rvlhltDiH~D~~Y~~gs~a~c~~p~ccr~s~~~p~~~~~~Ag~wG~y~~CD~P~~lies~L~~ike~~~~iD~I~wT 217 (577)
T KOG3770|consen 138 TFRVLHLTDIHLDPDYSEGSDADCDCPMCCRNSDGTPSGTKVAAGPWGDYGKCDSPKRLIESALDHIKENHKDIDYIIWT 217 (577)
T ss_pred ceeEEEeeccccCcccccCCcccccCccccccCCCCCCCccccCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 3999999999997653 1 0 01125666644333334 9999999
Q ss_pred CCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCC--CCch----------hhhcccc
Q 006340 82 GDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIV--GGSF----------DFFSKHS 149 (649)
Q Consensus 82 GDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~--~~~~----------~~~~~ys 149 (649)
||+.....-.. -.+++...+.++.+.+.+. .+++|+|...||||...+..+ .... ..+..++
T Consensus 218 GD~~~H~~w~~----t~~~~l~~~~~l~~~~~e~--FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~~~~~~W~ 291 (577)
T KOG3770|consen 218 GDNVAHDVWAQ----TEEENLSMLSRLTSLLSEY--FPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYKHLAGAWS 291 (577)
T ss_pred CCCCcccchhh----hHHHHHHHHHHHHHHHHHh--CCCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHHHHHhhhh
Confidence 99987653221 1234455677777766654 578999999999998644322 1111 1111111
Q ss_pred cc---cccCCCCccc-eEEEEeCCeeEEEEEecCCCccCCCCCCCCCC----CCCHHHHHHHHHHHhcccccCCCCceEE
Q 006340 150 IN---GQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFG----HPADQLLTEIDSELSQWNSQSTKPVTKI 221 (649)
Q Consensus 150 ~~---~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G----~l~~~qL~wL~~~L~~~~~~~~~~~~~I 221 (649)
.+ ++ ......+ .|..... ++..+|.+|+..-.- .|++- .-..+||+|+..+|+++++ +...+-
T Consensus 292 ~wlp~e~-~~t~~kga~Y~~~~~-~Glr~IslNt~~c~~----~N~~L~~n~tdp~~~lqWf~~~L~~ae~---~GekVh 362 (577)
T KOG3770|consen 292 TWLPAEA-KETFLKGAYYLVLVI-DGLRLISLNTNYCSA----PNFWLYANQTDPIDQLQWFVDQLQEAES---AGEKVH 362 (577)
T ss_pred ccCCHHH-HhhhhcCcEEEEeec-CCceEEEeccccccc----cceeeeecCCCchHHhhHHHHHHHHHHh---cCCEEE
Confidence 11 10 0111122 2334333 678999998764221 13332 2224689999999998874 335789
Q ss_pred EEEecCCCccCCC-CchhHHHHHHHhCC--ceEEEeCcccCCCC
Q 006340 222 TFGHFPVSFSASS-HSGRSLQDIFLKHS--LSAYLCGHLHTRFG 262 (649)
Q Consensus 222 lf~H~P~~~~~~~-~~~~~l~~ll~~~~--v~l~L~GHtH~~~g 262 (649)
+++|.|......- .....+..++.++. +...+.||+|..+-
T Consensus 363 il~HIPpG~~~c~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 363 ILGHIPPGDGVCLEGWSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred EEEeeCCCCcchhhhhhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 9999998742221 12345677777765 78999999998873
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.4e-09 Score=105.90 Aligned_cols=84 Identities=29% Similarity=0.414 Sum_probs=52.4
Q ss_pred EEEcCCCCCCCC--CCc------------HHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHH
Q 006340 44 VQLSDLHFSVHH--PDR------------ASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVM 109 (649)
Q Consensus 44 v~ISDlHls~~~--~~~------------~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl 109 (649)
+.|+|+|+.... +.+ ...+.+.+...++..+||+|+++|||+|+..... ..+|+.+.+.+
T Consensus 1 llvaDpql~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~------~~~~~~~~~~~ 74 (171)
T cd07384 1 LLVADPQILDETSYPPRPKIALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGGRIAD------SEEWEEYVKRF 74 (171)
T ss_pred CcccCccccCCCCCCCCchhhhHHHHHhHHHHHHHHHHHHHHhcCCCEEEEeccccCCcEeCC------HHHHHHHHHHH
Confidence 358999997754 211 1224445556667789999999999999876421 13455444444
Q ss_pred HHHHHhcCC--CCceEEEecCCCCCC
Q 006340 110 QDVIKRSGL--EKSIFYDIRGNHDNF 133 (649)
Q Consensus 110 ~~L~~~~~l--~~~p~~~I~GNHD~~ 133 (649)
.++...... ...|++.|+||||..
T Consensus 75 ~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 75 KKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHhcccccccCCceEEEECCccccC
Confidence 443221000 146999999999984
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.9e-08 Score=110.70 Aligned_cols=83 Identities=17% Similarity=0.294 Sum_probs=56.4
Q ss_pred eEEEEEcCCCCCCCC--CCcHHHHHHHHH---HHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHh
Q 006340 41 IWAVQLSDLHFSVHH--PDRASDFKRIVG---PALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKR 115 (649)
Q Consensus 41 ~~fv~ISDlHls~~~--~~~~~~l~~~i~---~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~ 115 (649)
|||+|+||+|++... ..+.++.+++++ +.+++.+||+|+++||++|...+... ..+.+.+++..+.+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~-------a~~~~~~~l~~L~~- 72 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSY-------ARELYNRFVVNLQQ- 72 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHH-------HHHHHHHHHHHHHh-
Confidence 699999999998642 333333333332 44567899999999999998764321 11234456666654
Q ss_pred cCCCCceEEEecCCCCCCC
Q 006340 116 SGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 116 ~~l~~~p~~~I~GNHD~~~ 134 (649)
. +.|++.|+||||...
T Consensus 73 --~-~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 73 --T-GCQLVVLAGNHDSVA 88 (407)
T ss_pred --c-CCcEEEEcCCCCChh
Confidence 2 369999999999864
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.9e-09 Score=103.44 Aligned_cols=137 Identities=18% Similarity=0.284 Sum_probs=83.2
Q ss_pred EEEcCCCCCCCCCCc-----------HHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 44 VQLSDLHFSVHHPDR-----------ASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 44 v~ISDlHls~~~~~~-----------~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
+.++|+|+-...... ...+++....+++..+||+|+++|||+|.+.... .++|..+-+-++++
T Consensus 1 llvADPqllg~~~~~~~~~~~~~~~~D~yl~r~~~~a~~~l~PD~Vi~lGDL~D~G~~~~------~~e~~e~l~Rf~~I 74 (195)
T cd08166 1 LLVADPQILGYQNENFGLGWIARWDSDRYLKKTYHLALNFVQPDIVIFLGDLMDEGSIAN------DDEYYSYVQRFINI 74 (195)
T ss_pred CcccCccccCCCCCCccccHHHHHHHHHHHHHHHHHHHhccCCCEEEEeccccCCCCCCC------HHHHHHHHHHHHHH
Confidence 357888885432111 1123344445556789999999999999987532 12343332223333
Q ss_pred HHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCC
Q 006340 113 IKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLF 192 (649)
Q Consensus 113 ~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~ 192 (649)
-.. .+.+|++.++||||..+- + .
T Consensus 75 f~~--~~~~~~~~VpGNHDIG~~----~-~-------------------------------------------------- 97 (195)
T cd08166 75 FEV--PNGTKIIYLPGDNDIGGE----E-E-------------------------------------------------- 97 (195)
T ss_pred hcC--CCCCcEEEECCCCCcCCC----C-C--------------------------------------------------
Confidence 211 345799999999998420 0 0
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 193 GHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 193 G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
...++.++..++. . |+++|.|+... .++.+..++.++.+.++++||.|...
T Consensus 98 -~~~~~~v~RF~~~------------F-i~lsH~P~~~~----~~~~~~~~~~~~~p~~Ifs~H~H~s~ 148 (195)
T cd08166 98 -DPIESKIRRFEKY------------F-IMLSHVPLLAE----GGQALKHVVTDLDPDLIFSAHRHKSS 148 (195)
T ss_pred -CcCHHHHHHHHHh------------h-eeeeccccccc----ccHHHHHHHHhcCceEEEEcCcccee
Confidence 0001111111111 2 88999998752 23467889999999999999999886
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.2e-08 Score=95.74 Aligned_cols=63 Identities=25% Similarity=0.327 Sum_probs=42.5
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhcc-CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMI-SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~-kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
||++++||+|.... .++..+ +.++.. ++|.|+++||+++. ++++.+.+ +
T Consensus 1 m~i~viSD~H~~~~------~~~~~~-~~~~~~~~~d~ii~~GD~~~~-------------------~~~~~l~~---~- 50 (158)
T TIGR00040 1 MKILVISDTHGPLR------ATELPV-ELFNLESNVDLVIHAGDLTSP-------------------FVLKEFED---L- 50 (158)
T ss_pred CEEEEEecccCCcc------hhHhHH-HHHhhccCCCEEEEcCCCCCH-------------------HHHHHHHH---h-
Confidence 68999999996532 234444 444555 89999999999821 12333332 1
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
+.|++.|+||||..
T Consensus 51 ~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 51 AAKVIAVRGNNDGE 64 (158)
T ss_pred CCceEEEccCCCch
Confidence 23799999999974
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.6e-08 Score=101.34 Aligned_cols=192 Identities=15% Similarity=0.145 Sum_probs=100.0
Q ss_pred eEEEEEcCCCCCCCCC----CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHh
Q 006340 41 IWAVQLSDLHFSVHHP----DRASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKR 115 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~----~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~ 115 (649)
++++|+||+| +...+ ....++.+++ +.+++.+|| +++.+||+++....... . ..+..++.++.
T Consensus 1 l~i~~~sD~h-g~~~~~~~~~g~~~l~~~v-~~~~~~~~~~l~v~~GD~~~~~~~~~~--~-------~~~~~~~~l~~- 68 (252)
T cd00845 1 LTILHTNDLH-GHFEPAGGVGGAARLATLI-KEERAENENTLLLDAGDNFDGSPPSTA--T-------KGEANIELMNA- 68 (252)
T ss_pred CEEEEecccc-cCccccCCcCCHHHHHHHH-HHHHhcCCCeEEEeCCccCCCccchhc--c-------CCcHHHHHHHh-
Confidence 4899999999 44321 3455778888 446666787 88999999987654211 0 01134444443
Q ss_pred cCCCCceEEEecCCCCCCCCCCCCCchhhhccccc---ccccCC------CCccc-eEEEEeCCeeEEEEEecCCCccCC
Q 006340 116 SGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSI---NGQLGR------KQNVN-SVTVQIGDEKHLFVGFDSTMSVGL 185 (649)
Q Consensus 116 ~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~---~~~l~~------~~~~~-~~~~~~~~g~~~fIglD~~~~pG~ 185 (649)
+. .-+.++||||...-.. ...+...+... ...+.. ..... ....+.++.++.|+++.+...+..
T Consensus 69 --~g--~d~~~~GNHe~d~g~~--~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~ 142 (252)
T cd00845 69 --LG--YDAVTIGNHEFDYGLD--ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTY 142 (252)
T ss_pred --cC--CCEEeeccccccccHH--HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceee
Confidence 21 4566789999742110 11111111000 000000 00111 235567788999999976544322
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 186 RGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 186 ~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
..|....+.......+.+++..++. ..+...+|++.|-|... ...+.+.+ .+++++++||+|...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~vIvl~H~g~~~------~~~la~~~--~giDlvlggH~H~~~ 207 (252)
T cd00845 143 TPLGWIIGLPFEDLAEAVAVAEELL---AEGADVIILLSHLGLDD------DEELAEEV--PGIDVILGGHTHHLL 207 (252)
T ss_pred cCCCcccCceecCHHHHHHHHHHHH---hCCCCEEEEEeccCccc------hHHHHhcC--CCccEEEcCCcCccc
Confidence 2221111111112223333222211 12456899999988653 11222222 369999999999765
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.3e-09 Score=106.22 Aligned_cols=117 Identities=19% Similarity=0.191 Sum_probs=62.6
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHH-HHHHHHHHHhcCCCCce
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEY-QNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y-~~vl~~L~~~~~l~~~p 122 (649)
++|||+|++...+.....+..++.. ....+||.++++||++|.......... ...... ..+++.. + .+.+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~-~~~~~~~~lvl~GDi~d~~~~~~~~~~---~~~~~~~~~l~~~~-~----~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAA-LALGEADALYLLGDIFDLWFGDDEVVP---PAAHEVLAALLRLA-D----RGTR 71 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhh-hccCCCCEEEEeccEEEEEecCCCCCC---hHHHHHHHHHHHHH-H----CCCe
Confidence 4799999998765433333443311 113699999999999986543211110 001111 2223222 1 3469
Q ss_pred EEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceE-EEEeCCeeEEEEEecCCC
Q 006340 123 FYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSV-TVQIGDEKHLFVGFDSTM 181 (649)
Q Consensus 123 ~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~-~~~~~~g~~~fIglD~~~ 181 (649)
++.++||||..- .+.+.... ......... .+..++.++.+...|...
T Consensus 72 v~~v~GNHD~~~-------~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~HG~~~d 119 (217)
T cd07398 72 VYYVPGNHDFLL-------GDFFAEEL-----GLILLPDPLVHLELDGKRILLEHGDQFD 119 (217)
T ss_pred EEEECCCchHHH-------HhHHHHHc-----CCEEeccceEEEeeCCeEEEEECCCcCc
Confidence 999999999852 11111100 111111122 466677788887777654
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.4e-08 Score=94.92 Aligned_cols=59 Identities=20% Similarity=0.204 Sum_probs=42.4
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
|++++||+|... +.+++++ +.++. +|.++++||+++..... . + . .+.
T Consensus 1 ~i~~isD~H~~~------~~~~~~~-~~~~~--~d~ii~~GD~~~~~~~~---------------~-~---~-----~~~ 47 (155)
T cd00841 1 KIGVISDTHGSL------ELLEKAL-ELFGD--VDLIIHAGDVLYPGPLN---------------E-L---E-----LKA 47 (155)
T ss_pred CEEEEecCCCCH------HHHHHHH-HHhcC--CCEEEECCccccccccc---------------h-h---h-----cCC
Confidence 589999999653 3566666 33333 99999999999877532 1 1 1 124
Q ss_pred eEEEecCCCCCC
Q 006340 122 IFYDIRGNHDNF 133 (649)
Q Consensus 122 p~~~I~GNHD~~ 133 (649)
|++.|+||||..
T Consensus 48 ~~~~V~GNhD~~ 59 (155)
T cd00841 48 PVIAVRGNCDGE 59 (155)
T ss_pred cEEEEeCCCCCc
Confidence 899999999985
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.4e-08 Score=91.42 Aligned_cols=69 Identities=20% Similarity=0.263 Sum_probs=44.0
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCceE
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIF 123 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~ 123 (649)
+++||+|.+...... ... .....+.+||+|+++||+++....... ..+.. ...... ...|+
T Consensus 1 ~~~gD~h~~~~~~~~---~~~--~~~~~~~~~~~vi~~GD~~~~~~~~~~---------~~~~~-~~~~~~----~~~~~ 61 (131)
T cd00838 1 AVISDIHGNLEALEA---VLE--AALAAAEKPDFVLVLGDLVGDGPDPEE---------VLAAA-LALLLL----LGIPV 61 (131)
T ss_pred CeeecccCCccchHH---HHH--HHHhcccCCCEEEECCcccCCCCCchH---------HHHHH-HHHhhc----CCCCE
Confidence 479999998753221 111 133457899999999999998875321 11111 122211 34699
Q ss_pred EEecCCCC
Q 006340 124 YDIRGNHD 131 (649)
Q Consensus 124 ~~I~GNHD 131 (649)
+.++||||
T Consensus 62 ~~~~GNHD 69 (131)
T cd00838 62 YVVPGNHD 69 (131)
T ss_pred EEeCCCce
Confidence 99999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.7e-08 Score=101.62 Aligned_cols=207 Identities=15% Similarity=0.127 Sum_probs=101.6
Q ss_pred eEEEEEcCCCCCCCCC-----------CcHHHHHHHHHHHHhccCCcEEEE-cCCCCCCCCcchhhhhhhhHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP-----------DRASDFKRIVGPALSMISPSLVLI-TGDLTDGKSKDLLTMKQNEVEWMEYQNV 108 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~-----------~~~~~l~~~i~~~l~~~kPD~VIi-tGDLtd~~~~~~~~s~Q~e~eW~~Y~~v 108 (649)
++|+|++|+|- ...| ....++..++ +.+++.+|+.+++ +||+++..........+... .-+..
T Consensus 1 l~il~t~D~Hg-~~~~~~~~~~~~~~~gg~~~l~~~i-~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~---~~~~~ 75 (277)
T cd07410 1 LRILATSDLHG-NLLPYDYYTDKPDASGGLARVATLI-KKARAENPNTLLIDNGDTIQGSPLADYYAKIEDG---DPHPM 75 (277)
T ss_pred CeEEEEecccc-ceeCccccCCCcCCccCHHHHHHHH-HHHHhcCCCeEEEeCCccCCccHHHHHhhhcccC---CCChH
Confidence 57999999994 4321 1235677777 4456667888777 99999865421100000000 00123
Q ss_pred HHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcc--cc---cc-cccC-CCCccce-EEEEeC-CeeEEEEEecC
Q 006340 109 MQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK--HS---IN-GQLG-RKQNVNS-VTVQIG-DEKHLFVGFDS 179 (649)
Q Consensus 109 l~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~--ys---~~-~~l~-~~~~~~~-~~~~~~-~g~~~fIglD~ 179 (649)
++.++. +. .-+.+.||||...-. +...+..+. +. .+ .... ....+.+ ...+.+ +-++.|+|+-+
T Consensus 76 ~~~ln~---~g--~d~~~lGNHe~d~g~--~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~ 148 (277)
T cd07410 76 IAAMNA---LG--YDAGTLGNHEFNYGL--DYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTT 148 (277)
T ss_pred HHHHHh---cC--CCEEeecccCcccCH--HHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCC
Confidence 444443 21 336678999964210 011111111 00 00 0000 0111123 345677 88999999854
Q ss_pred CCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC--CCCchhHHHHHHHh-CCceEEEeCc
Q 006340 180 TMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA--SSHSGRSLQDIFLK-HSLSAYLCGH 256 (649)
Q Consensus 180 ~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~--~~~~~~~l~~ll~~-~~v~l~L~GH 256 (649)
...+....|.+.-|.--.+..+.+++.+++.+++ +...+|+++|....... .........++.++ .+++++++||
T Consensus 149 ~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~--~~D~IIvl~H~g~~~~~~~~~~~~~~~~~la~~~~~vD~IlgGH 226 (277)
T cd07410 149 PQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRAE--GADVVVVLAHGGFERDLEESLTGENAAYELAEEVPGIDAILTGH 226 (277)
T ss_pred cccccccCcccCCCcEEcCHHHHHHHHHHHHHHc--CCCEEEEEecCCcCCCcccccCCccHHHHHHhcCCCCcEEEeCC
Confidence 3322211221111211111222344444433321 34589999998765321 11122234556655 3699999999
Q ss_pred ccCCC
Q 006340 257 LHTRF 261 (649)
Q Consensus 257 tH~~~ 261 (649)
+|...
T Consensus 227 sH~~~ 231 (277)
T cd07410 227 QHRRF 231 (277)
T ss_pred Ccccc
Confidence 99775
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.9e-07 Score=89.25 Aligned_cols=65 Identities=20% Similarity=0.214 Sum_probs=41.9
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
+++.|||+|++.... .+.+.+.+.++..++|.++++||+++. ++++.+.+ +. .
T Consensus 1 ~i~viSDtHl~~~~~----~~~~~~~~~~~~~~~d~iih~GDi~~~-------------------~~~~~l~~---~~-~ 53 (178)
T cd07394 1 LVLVIGDLHIPHRAS----DLPAKFKKLLVPGKIQHVLCTGNLCSK-------------------ETYDYLKT---IA-P 53 (178)
T ss_pred CEEEEEecCCCCCch----hhHHHHHHHhccCCCCEEEECCCCCCH-------------------HHHHHHHh---hC-C
Confidence 478999999876322 223323244444689999999999871 12333322 11 2
Q ss_pred eEEEecCCCCCC
Q 006340 122 IFYDIRGNHDNF 133 (649)
Q Consensus 122 p~~~I~GNHD~~ 133 (649)
|++.|+||||..
T Consensus 54 ~~~~V~GN~D~~ 65 (178)
T cd07394 54 DVHIVRGDFDEN 65 (178)
T ss_pred ceEEEECCCCcc
Confidence 799999999974
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.1e-07 Score=94.27 Aligned_cols=191 Identities=15% Similarity=0.104 Sum_probs=98.5
Q ss_pred eEEEEEcCCCCCCCCC-----CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP-----DRASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIK 114 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~-----~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~ 114 (649)
++++|++|+| ..... .-..++...+ +.+++.+|+ +++.+||+++........ + .+..++.++.
T Consensus 1 ~~il~~nd~~-~~~~~~~~~~gG~~rl~~~i-~~~r~~~~~~l~l~~GD~~~g~~~~~~~--~-------g~~~~~~l~~ 69 (257)
T cd07406 1 FTILHFNDVY-EIAPLDGGPVGGAARFATLR-KQLRKENPNTLVLFSGDVLSPSLLSTAT--K-------GKQMVPVLNA 69 (257)
T ss_pred CeEEEEccce-eecccCCCCcCCHHHHHHHH-HHHHhcCCCEEEEECCCccCCccchhhc--C-------CccHHHHHHh
Confidence 4799999999 32211 1245677787 445556777 999999999866421110 0 1123444433
Q ss_pred hcCCCCceEEEecCCCCCCCCCCCCCchhhhccc-----ccc--cccCCCC--ccc-eEEEEeCCeeEEEEEecCCCccC
Q 006340 115 RSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKH-----SIN--GQLGRKQ--NVN-SVTVQIGDEKHLFVGFDSTMSVG 184 (649)
Q Consensus 115 ~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~y-----s~~--~~l~~~~--~~~-~~~~~~~~g~~~fIglD~~~~pG 184 (649)
+. .-+.++||||...-. +...+.+++. +.+ ..-+... .+. ...++.++.++.|+|+.+...+.
T Consensus 70 ---l~--~d~~~~GNHefd~g~--~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~ 142 (257)
T cd07406 70 ---LG--VDLACFGNHEFDFGE--DQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLE 142 (257)
T ss_pred ---cC--CcEEeecccccccCH--HHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccc
Confidence 21 336689999974210 0111111110 000 0000000 112 35566788899999996543321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhC-CceEEEeCcccCCC
Q 006340 185 LRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 185 ~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
.- +....+..-.+..+.+++.+++.++ .+...+|++.|-+... + . ++.++. +++++++||+|...
T Consensus 143 ~~-~~~~~~~~~~d~~~~~~~~v~~~~~--~~~D~iVvl~H~g~~~-----d-~---~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 143 TL-TIDPEYVRYRDYVETARELVDELRE--QGADLIIALTHMRLPN-----D-K---RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cc-cCCCCcceEcCHHHHHHHHHHHHHh--CCCCEEEEEeccCchh-----h-H---HHHHhCCCCceEEecccceeE
Confidence 00 1111111112233444444433332 2346899999987531 1 2 333343 59999999999765
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.7e-07 Score=92.38 Aligned_cols=66 Identities=24% Similarity=0.289 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHH-HHHHHHHHHhc--------------CCCCceEEE
Q 006340 61 DFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEY-QNVMQDVIKRS--------------GLEKSIFYD 125 (649)
Q Consensus 61 ~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y-~~vl~~L~~~~--------------~l~~~p~~~ 125 (649)
.+++..+......+||.|+++|||+|.+... .+||..+ ++..+.+.... .-.+++++.
T Consensus 31 YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~-------D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 31 FLGHIVSMMQFWLKPDAVVVLGDLFSSQWID-------DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred HHHHHHHHHHHhcCCCEEEEeccccCCCccc-------HHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 4566665545668999999999999875321 2455333 33222221100 001368999
Q ss_pred ecCCCCCC
Q 006340 126 IRGNHDNF 133 (649)
Q Consensus 126 I~GNHD~~ 133 (649)
|+||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999984
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.6e-07 Score=85.65 Aligned_cols=26 Identities=19% Similarity=0.424 Sum_probs=21.1
Q ss_pred hhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 237 GRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 237 ~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
.+.+.+++.++++++++|||+|....
T Consensus 80 ~~~l~~~l~~~~~~~vl~GH~H~~~~ 105 (129)
T cd07403 80 FEAFLDFIDRFRPKLFIHGHTHLNYG 105 (129)
T ss_pred HHHHHHHHHHHCCcEEEEcCcCCCcC
Confidence 35677788888899999999997753
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.6e-06 Score=88.20 Aligned_cols=199 Identities=14% Similarity=0.151 Sum_probs=98.3
Q ss_pred eEEEEEcCCCCCCCC----CCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhc
Q 006340 41 IWAVQLSDLHFSVHH----PDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRS 116 (649)
Q Consensus 41 ~~fv~ISDlHls~~~----~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~ 116 (649)
++++|+||+|..-.. ..-..++..++++ +++.++++++.+||+++........ + -+..++.++.
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~-~~~~~~~l~l~~GD~~~gs~~~~~~--~-------g~~~~~~ln~-- 68 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKE-MNKLDNDLLVDAGDAIQGLPISDLD--K-------GETIIKIMNA-- 68 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHH-HHhcCCEEEEeCCCcCCCchhhhhc--C-------CcHHHHHHHh--
Confidence 479999999954221 1124567777744 4333678999999999865421100 0 1123444443
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCchhhhcccc-----cc-cccC-CCCccceEE-EEeC-CeeEEEEEecCCCccCCCC
Q 006340 117 GLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHS-----IN-GQLG-RKQNVNSVT-VQIG-DEKHLFVGFDSTMSVGLRG 187 (649)
Q Consensus 117 ~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys-----~~-~~l~-~~~~~~~~~-~~~~-~g~~~fIglD~~~~pG~~~ 187 (649)
+ +..+ .+.||||...- .+...+..+... .+ .... ....+.+|. .+.+ +-++.|+|+-+...+....
T Consensus 69 -~-g~d~-~~~GNHefd~G--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~ 143 (257)
T cd07408 69 -V-GYDA-VTPGNHEFDYG--LDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTH 143 (257)
T ss_pred -c-CCcE-EccccccccCC--HHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccC
Confidence 2 2234 46799996421 111111111110 00 0000 011122333 3556 7789999996543332222
Q ss_pred CCCCCCCCCHHHHHHHHHH-HhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhC-CceEEEeCcccCCC
Q 006340 188 PTNLFGHPADQLLTEIDSE-LSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 188 p~~~~G~l~~~qL~wL~~~-L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
|.+..|.--.+..+.+++. ..+.++ .+.+.+|++.|.+.......... .++.++. ++++++.||+|...
T Consensus 144 ~~~~~~~~~~d~~~~~~~~~v~~l~~--~~~D~iIvl~H~G~~~~~~~~~~---~~la~~~~giDvIigGH~H~~~ 214 (257)
T cd07408 144 PKNVKDVTFEDPIEEAKKVIVAALKA--KGADVIVALGHLGVDRTSSPWTS---TELAANVTGIDLIIDGHSHTTI 214 (257)
T ss_pred ccccCCcEEecHHHHHHHHHHHHHHh--CCCCEEEEEeCcCcCCCCCCccH---HHHHHhCCCceEEEeCCCcccc
Confidence 3222221111223334333 222221 23468999999876542111111 2333343 59999999999875
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=6.9e-06 Score=85.41 Aligned_cols=192 Identities=13% Similarity=0.134 Sum_probs=96.8
Q ss_pred eEEEEEcCCCCCCCCC----------------CcHHHHHHHHHHHHhcc-CCcEE-EEcCCCCCCCCcchhhhhhhhHHH
Q 006340 41 IWAVQLSDLHFSVHHP----------------DRASDFKRIVGPALSMI-SPSLV-LITGDLTDGKSKDLLTMKQNEVEW 102 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~----------------~~~~~l~~~i~~~l~~~-kPD~V-IitGDLtd~~~~~~~~s~Q~e~eW 102 (649)
++|++++|+|-.-... .-..++...+ +.+++. .||.+ +.+||+.+........
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v-~~~~~~~~~~~l~l~~GD~~~gs~~~~~~-------- 71 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLI-KRIRAERNPNTLLLDGGDTWQGSGEALYT-------- 71 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHH-HHHHHhcCCCeEEEeCCCccCCChHHhhc--------
Confidence 4789999999752210 1135677777 445555 88977 5699999876431110
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccc--c-ccccC----CCCccceE-EEEeCCeeEEE
Q 006340 103 MEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHS--I-NGQLG----RKQNVNSV-TVQIGDEKHLF 174 (649)
Q Consensus 103 ~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys--~-~~~l~----~~~~~~~~-~~~~~~g~~~f 174 (649)
..+..++.++. .++.++.||||...-. +...+..++.. . ...+. ....+.++ ..+.++.++.+
T Consensus 72 -~g~~~~~~l~~------~g~da~~GNHefd~g~--~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgv 142 (264)
T cd07411 72 -RGQAMVDALNA------LGVDAMVGHWEFTYGP--ERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGV 142 (264)
T ss_pred -CChhHHHHHHh------hCCeEEecccccccCH--HHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEE
Confidence 01134444433 2455555999964211 01111111100 0 00000 00111123 34678889999
Q ss_pred EEecCCCccCCCCCCCCCCCC-CHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHh-CCceEE
Q 006340 175 VGFDSTMSVGLRGPTNLFGHP-ADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLK-HSLSAY 252 (649)
Q Consensus 175 IglD~~~~pG~~~p~~~~G~l-~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~-~~v~l~ 252 (649)
||+.+...+... +..+.+.+ -.+..+.+++.+.+..+ ..+...+|++.|.+... + . ++.++ .+++++
T Consensus 143 iG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~iI~l~H~g~~~-----~-~---~la~~~~~iDli 211 (264)
T cd07411 143 IGQTFPYVPIAN-PPRFTPGLTFGIREEELQEVVVKLRR-EEGVDVVVLLSHNGLPV-----D-V---ELAERVPGIDVI 211 (264)
T ss_pred EEeccCCccccc-CcCCCCCcEECCHHHHHHHHHHHHHH-hCCCCEEEEEecCCchh-----h-H---HHHhcCCCCcEE
Confidence 999765433211 11111111 11233444444333221 12346899999987531 1 1 23333 359999
Q ss_pred EeCcccCCC
Q 006340 253 LCGHLHTRF 261 (649)
Q Consensus 253 L~GHtH~~~ 261 (649)
++||.|...
T Consensus 212 lgGH~H~~~ 220 (264)
T cd07411 212 LSGHTHERT 220 (264)
T ss_pred EeCcccccc
Confidence 999999764
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.3e-05 Score=99.39 Aligned_cols=213 Identities=17% Similarity=0.181 Sum_probs=111.5
Q ss_pred ceEEEEeC--CCCC----CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEE-cCCCCCCCCcchhhhhhhh
Q 006340 27 GRRVIQLR--EGPE----HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLI-TGDLTDGKSKDLLTMKQNE 99 (649)
Q Consensus 27 ~~~~~~~~--~~p~----~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIi-tGDLtd~~~~~~~~s~Q~e 99 (649)
.++++.++ +.|. ..++++|++|+|. .. ....++...+ +.+++.+|+.+++ +||+++....... .+
T Consensus 641 ~~~~i~l~~~~~~~~~~~~~l~Il~~nD~Hg-~l--~g~~r~~~~i-~~~r~~~~~~l~ld~GD~~~gs~~~~~--~~-- 712 (1163)
T PRK09419 641 GAYKLNFVDEAEPEKKDNWELTILHTNDFHG-HL--DGAAKRVTKI-KEVKEENPNTILVDAGDVYQGSLYSNL--LK-- 712 (1163)
T ss_pred EEEEEecCCCcccccCCceEEEEEEEeeccc-CC--CCHHHHHHHH-HHHHhhCCCeEEEecCCCCCCcchhhh--cC--
Confidence 35666665 5553 2399999999994 32 2234677777 4455668888766 9999976532110 00
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhh------------hcc--c---ccc---cccCC-CC
Q 006340 100 VEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDF------------FSK--H---SIN---GQLGR-KQ 158 (649)
Q Consensus 100 ~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~------------~~~--y---s~~---~~l~~-~~ 158 (649)
.+..++.++. +. .-+.++||||...-.. ...+. |.+ + +.+ ..-+. ..
T Consensus 713 -----g~~~~~~ln~---lg--~d~~~~GNHEfd~g~~--~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~ 780 (1163)
T PRK09419 713 -----GLPVLKMMKE---MG--YDASTFGNHEFDWGPD--VLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVS 780 (1163)
T ss_pred -----ChHHHHHHhC---cC--CCEEEecccccccChH--HHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCcccc
Confidence 1133444433 21 3466999999742110 00000 000 1 000 00000 00
Q ss_pred ccc-eEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCch
Q 006340 159 NVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSG 237 (649)
Q Consensus 159 ~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~ 237 (649)
... ....+.++.++.|||+-+...+....|.+..|.-=.+..+.+++..++.+++ .+.+.+|+++|......... ..
T Consensus 781 ~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~-~~~D~VV~LsH~G~~~d~~~-~~ 858 (1163)
T PRK09419 781 WAKPYILVEVNGKKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEK-EKVDAIIALTHLGSNQDRTT-GE 858 (1163)
T ss_pred ccCCEEEEEECCEEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhh-cCCCEEEEEecCCccccccc-cc
Confidence 111 2345678889999999654433333332222211112333444444444311 23469999999876532111 11
Q ss_pred hHHHHHHHhC-CceEEEeCcccCCC
Q 006340 238 RSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 238 ~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
.+..++.++- ++++++.||+|...
T Consensus 859 ~~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 859 ITGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred cHHHHHHHhCCCCCEEEeCCCCccc
Confidence 2345666654 59999999999875
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-05 Score=82.98 Aligned_cols=202 Identities=15% Similarity=0.172 Sum_probs=99.5
Q ss_pred eEEEEEcCCCCCCCCC---------CcHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP---------DRASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQ 110 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~---------~~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~ 110 (649)
++++|++|+|- ...+ .-..++..++++ +++..+ .+++..||++....... ...+ .+ ..++
T Consensus 1 i~il~tnD~Hg-~~~~~~~~~~~~~gG~arl~~~i~~-~r~~~~~~l~ld~GD~~~gs~~~s-~~~~----g~---~~~~ 70 (288)
T cd07412 1 VQILAINDFHG-RLEPPGKVVTVPAGGAAYLAAYLDE-ARAQNPNSLFVSAGDLIGASPFES-ALLQ----DE---PTIE 70 (288)
T ss_pred CeEEEEecccc-CccCCCCccccccccHHHHHHHHHH-HHhcCCCeEEEeCCcccccccchh-hccc----CC---cHHH
Confidence 47999999993 3322 124567777744 444455 48999999996543210 0000 00 2333
Q ss_pred HHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhh----------------c--ccc---cc--cccCCCCccce-EEEE
Q 006340 111 DVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFF----------------S--KHS---IN--GQLGRKQNVNS-VTVQ 166 (649)
Q Consensus 111 ~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~----------------~--~ys---~~--~~l~~~~~~~~-~~~~ 166 (649)
.++. + + .=..++||||...-.. ...+.. + ++. .+ ..-.....+.+ ...+
T Consensus 71 ~~n~---~-g-~Da~t~GNHefd~G~~--~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~ 143 (288)
T cd07412 71 ALNA---M-G-VDASAVGNHEFDEGYA--ELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKD 143 (288)
T ss_pred HHHh---h-C-CeeeeecccccccCHH--HHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEE
Confidence 3333 2 1 2246789999742100 000000 0 010 00 00000111122 3356
Q ss_pred eCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCC----chhHHHH
Q 006340 167 IGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSH----SGRSLQD 242 (649)
Q Consensus 167 ~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~----~~~~l~~ 242 (649)
.++.++.|||+-+...+....|.+..|.--.+..+.+++.++++++ .+.+.+|++.|.......... ...+..+
T Consensus 144 ~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~--~~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~ 221 (288)
T cd07412 144 VGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKA--GGVDAIVVLAHEGGSTKGGDDTCSAASGPIAD 221 (288)
T ss_pred ECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHH--CCCCEEEEEeCCCCCCCCCCccccccChhHHH
Confidence 7788999999943332222222222221112234455555555442 134689999997654311110 0113445
Q ss_pred HHHh--CCceEEEeCcccCCC
Q 006340 243 IFLK--HSLSAYLCGHLHTRF 261 (649)
Q Consensus 243 ll~~--~~v~l~L~GHtH~~~ 261 (649)
++.+ .+++++++||+|...
T Consensus 222 l~~~~~~~iD~IlgGHsH~~~ 242 (288)
T cd07412 222 IVNRLDPDVDVVFAGHTHQAY 242 (288)
T ss_pred HHhhcCCCCCEEEeCccCccc
Confidence 5554 359999999999875
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.9e-06 Score=84.55 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=49.3
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||+++|||+|... ..+++++ +.++..+||.++++||+++.+...... .+.+ -.++++.+.+ + +
T Consensus 1 mri~viSD~Hg~~------~~~~~~l-~~~~~~~~d~ii~lGDi~~~~~~~~~~-~~~~-----~~~~~~~l~~---~-~ 63 (182)
T PRK09453 1 MKLMFASDTHGSL------PATEKAL-ELFAQSGADWLVHLGDVLYHGPRNPLP-EGYA-----PKKVAELLNA---Y-A 63 (182)
T ss_pred CeEEEEEeccCCH------HHHHHHH-HHHHhcCCCEEEEcccccccCcCCCCc-cccC-----HHHHHHHHHh---c-C
Confidence 6899999999532 3567776 445667899999999999865421110 0000 0134444443 2 2
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
.+++.|+||||..
T Consensus 64 ~~v~~V~GNhD~~ 76 (182)
T PRK09453 64 DKIIAVRGNCDSE 76 (182)
T ss_pred CceEEEccCCcch
Confidence 4899999999974
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.28 E-value=9.6e-06 Score=87.79 Aligned_cols=88 Identities=19% Similarity=0.203 Sum_probs=59.7
Q ss_pred CCceEEEEEcCCCCCCCCCC-----------cHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHH
Q 006340 38 EHVIWAVQLSDLHFSVHHPD-----------RASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQ 106 (649)
Q Consensus 38 ~~~~~fv~ISDlHls~~~~~-----------~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~ 106 (649)
++.+|++.++|+|+-...+. +.-.+++.......-.|||.+++.|||+|.+.... ++||+.+.
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~------~eEf~~~~ 119 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAG------DEEFKKRY 119 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCC------hHHHHHHH
Confidence 46799999999999653321 11234444433333579999999999999765321 35786665
Q ss_pred HHHHHHHHhcCCCCceEEEecCCCCCC
Q 006340 107 NVMQDVIKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 107 ~vl~~L~~~~~l~~~p~~~I~GNHD~~ 133 (649)
+-++++-... ..+++..++||||.-
T Consensus 120 ~RfkkIf~~k--~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 120 ERFKKIFGRK--GNIKVIYIAGNHDIG 144 (410)
T ss_pred HHHHHhhCCC--CCCeeEEeCCccccc
Confidence 5566664422 246999999999984
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.3e-06 Score=84.85 Aligned_cols=77 Identities=23% Similarity=0.330 Sum_probs=47.9
Q ss_pred EEEcCCCCCCCC---------CCc--HHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 44 VQLSDLHFSVHH---------PDR--ASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 44 v~ISDlHls~~~---------~~~--~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
+++||+|++... |.. .+.++++. +.+++.+||.++++||+++....... .++.... +..+
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~-~~~~~~~~d~lii~GDl~~~~~~~~~------~~~~~~~--~~~~ 71 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLD-RLIEEYGPERLIILGDLKHSFGGLSR------QEFEEVA--FLRL 71 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHH-HHHHhcCCCEEEEeCcccccccccCH------HHHHHHH--HHHh
Confidence 479999999642 111 12345554 55667899999999999987653211 1111111 1111
Q ss_pred HHhcCCCCceEEEecCCCCCC
Q 006340 113 IKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 113 ~~~~~l~~~p~~~I~GNHD~~ 133 (649)
. ..+.+++.++||||..
T Consensus 72 ~----~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 72 L----AKDVDVILIRGNHDGG 88 (172)
T ss_pred c----cCCCeEEEEcccCccc
Confidence 1 2356999999999985
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.4e-05 Score=80.19 Aligned_cols=191 Identities=19% Similarity=0.169 Sum_probs=97.4
Q ss_pred eEEEEEcCCCCCCCC--C-------------CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHH
Q 006340 41 IWAVQLSDLHFSVHH--P-------------DRASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWME 104 (649)
Q Consensus 41 ~~fv~ISDlHls~~~--~-------------~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~ 104 (649)
++|+|.+|+|-.-.. . .-..++...+++ +++..|+ +++-+||.++........ +-+
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~-~r~~~~~~l~ld~GD~~~gs~~~~~~--~g~----- 72 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKE-LRAENPNVLFLNAGDAFQGTLWYTLY--KGN----- 72 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHH-HHhcCCCEEEEeCCCCCCCcchhhhc--CCh-----
Confidence 479999999964211 0 124567777744 4455677 556699998765421110 101
Q ss_pred HHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcc--c---ccc-cccC----CCCccce-EEEEeCCeeEE
Q 006340 105 YQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK--H---SIN-GQLG----RKQNVNS-VTVQIGDEKHL 173 (649)
Q Consensus 105 Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~--y---s~~-~~l~----~~~~~~~-~~~~~~~g~~~ 173 (649)
..++.++. + +.. ..++||||...-. +...+.... + +.+ .... ....+.+ ..++.++.++.
T Consensus 73 --~~~~~ln~---~-g~D-~~~lGNHefd~G~--~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIg 143 (281)
T cd07409 73 --ADAEFMNL---L-GYD-AMTLGNHEFDDGV--EGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIG 143 (281)
T ss_pred --HHHHHHHh---c-CCC-EEEeccccccCCH--HHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEE
Confidence 22333332 2 123 4467999975211 111111111 1 000 0000 0011122 34567888999
Q ss_pred EEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHh-CCceEE
Q 006340 174 FVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLK-HSLSAY 252 (649)
Q Consensus 174 fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~-~~v~l~ 252 (649)
|+++-+...+....| ..|.--.+..+.+++.+++++++ +...+|++.|..... + .++.++ .+++++
T Consensus 144 viG~~~~~~~~~~~~--~~~~~~~d~~~~~~~~v~~lr~~--~~D~II~l~H~G~~~-----d----~~la~~~~giD~I 210 (281)
T cd07409 144 IIGYTTPDTTELSSP--GGKVKFLDEIEAAQKEADKLKAQ--GVNKIIALSHSGYEV-----D----KEIARKVPGVDVI 210 (281)
T ss_pred EEEEecCcccccccC--CCceEECCHHHHHHHHHHHHHhc--CCCEEEEEeccCchh-----H----HHHHHcCCCCcEE
Confidence 999965443221111 11211122345566666555432 346899999987531 1 233333 359999
Q ss_pred EeCcccCCC
Q 006340 253 LCGHLHTRF 261 (649)
Q Consensus 253 L~GHtH~~~ 261 (649)
++||+|...
T Consensus 211 iggH~H~~~ 219 (281)
T cd07409 211 VGGHSHTFL 219 (281)
T ss_pred EeCCcCccc
Confidence 999999875
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.2e-05 Score=73.82 Aligned_cols=64 Identities=19% Similarity=0.290 Sum_probs=45.1
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHH-HHHhcCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQD-VIKRSGL 118 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~-L~~~~~l 118 (649)
.|+++.|||+|..... .++.. +.....++|+||++||.+....... +.. +
T Consensus 1 ~m~ilviSDtH~~~~~------~~~~~-~~~~~~~~d~vih~GD~~~~~~~~~----------------l~~~~------ 51 (172)
T COG0622 1 MMKILVISDTHGPLRA------IEKAL-KIFNLEKVDAVIHAGDSTSPFTLDA----------------LEGGL------ 51 (172)
T ss_pred CcEEEEEeccCCChhh------hhHHH-HHhhhcCCCEEEECCCcCCccchHH----------------hhccc------
Confidence 3799999999987531 22333 3345679999999999998776421 111 1
Q ss_pred CCceEEEecCCCCCC
Q 006340 119 EKSIFYDIRGNHDNF 133 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~ 133 (649)
..+++.|.||.|..
T Consensus 52 -~~~i~~V~GN~D~~ 65 (172)
T COG0622 52 -AAKLIAVRGNCDGE 65 (172)
T ss_pred -ccceEEEEccCCCc
Confidence 24899999999986
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.8e-05 Score=71.38 Aligned_cols=75 Identities=19% Similarity=0.355 Sum_probs=49.6
Q ss_pred EEEEEcCCCCCCCC-----C-CcHHHHHHHH-HHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 42 WAVQLSDLHFSVHH-----P-DRASDFKRIV-GPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 42 ~fv~ISDlHls~~~-----~-~~~~~l~~~i-~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
.+-++||+|++... | .+.+..++.+ ....+..+| |.+.++||++....+.. .|..++++|
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~-----------~a~~IlerL- 72 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRER-----------AAGLILERL- 72 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhh-----------HHHHHHHHc-
Confidence 46789999998764 2 2334445444 333455677 78999999998766432 244566553
Q ss_pred HhcCCCCceEEEecCCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~ 134 (649)
++ ....|+||||...
T Consensus 73 -----nG-rkhlv~GNhDk~~ 87 (186)
T COG4186 73 -----NG-RKHLVPGNHDKCH 87 (186)
T ss_pred -----CC-cEEEeeCCCCCCc
Confidence 33 4588999999874
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.14 E-value=6.1e-06 Score=84.69 Aligned_cols=84 Identities=26% Similarity=0.289 Sum_probs=49.1
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHhcc-----CCcEEEEcCCCCCCCCcc---h--hhhhhhhHHHHHHHHHHHHHH
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMI-----SPSLVLITGDLTDGKSKD---L--LTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~~~-----kPD~VIitGDLtd~~~~~---~--~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
++|||+|++..... ...++.++ +.++.. +||.++++||++|..... . .......+.++...+.++++.
T Consensus 2 ~~iSDlHl~~~~~~-~~~~~~l~-~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 79 (243)
T cd07386 2 VFISDVHVGSKTFL-EDAFEKFV-RWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP 79 (243)
T ss_pred EEecccCCCchhhh-HHHHHHHH-HHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc
Confidence 79999999764321 12344444 444443 569999999999974210 0 000111122333444444432
Q ss_pred HhcCCCCceEEEecCCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~ 134 (649)
+++|++.++||||...
T Consensus 80 -----~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 -----SHIKIIIIPGNHDAVR 95 (243)
T ss_pred -----cCCeEEEeCCCCCccc
Confidence 2479999999999853
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00017 Score=79.43 Aligned_cols=54 Identities=20% Similarity=0.279 Sum_probs=42.4
Q ss_pred CCceEEEEEcCCCCCCCCC------CcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcch
Q 006340 38 EHVIWAVQLSDLHFSVHHP------DRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDL 92 (649)
Q Consensus 38 ~~~~~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~ 92 (649)
++.+||+.-||.|++.... +....|+++| +.+...++|+|++.|||++...++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl-~iA~e~~VDmiLlGGDLFHeNkPSr 70 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEIL-EIAQENDVDMILLGGDLFHENKPSR 70 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHH-HHHHhcCCcEEEecCcccccCCccH
Confidence 4689999999999987642 2234577888 5566789999999999998877654
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.2e-06 Score=84.39 Aligned_cols=77 Identities=22% Similarity=0.291 Sum_probs=49.6
Q ss_pred eEEEEEcCCCCCCCCC-------CcH----HHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP-------DRA----SDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVM 109 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~-------~~~----~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl 109 (649)
-+.++|||+|++.... -.. +.++++. +.++..+||.++++||+.+..... .+|+...+.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~-~li~~~~~d~vIi~GDl~h~~~~~--------~~~~~~~~~l 85 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERAL-SIADKYGIEALIINGDLKHEFKKG--------LEWRFIREFI 85 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHH-HHHhhcCCCEEEEcCccccccCCh--------HHHHHHHHHH
Confidence 3578999999986421 111 2334443 444567899999999999876532 1233344444
Q ss_pred HHHHHhcCCCCceEEEecCCCCCC
Q 006340 110 QDVIKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 110 ~~L~~~~~l~~~p~~~I~GNHD~~ 133 (649)
+++ ..+++.|+||||..
T Consensus 86 ~~~-------~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 86 EVT-------FRDLILIRGNHDAL 102 (225)
T ss_pred Hhc-------CCcEEEECCCCCCc
Confidence 432 14899999999975
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00026 Score=81.42 Aligned_cols=199 Identities=14% Similarity=0.118 Sum_probs=96.8
Q ss_pred ceEEEEEcCCCCCCCCCC----cHHHHHHHHHHHHhc-----cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHPD----RASDFKRIVGPALSM-----ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQ 110 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~----~~~~l~~~i~~~l~~-----~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~ 110 (649)
.+.|+|++|+|-.-.... -..++..++++ +++ ...-+++-.||............. +..++
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~-~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g---------~~~i~ 103 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQ-IRKEVAAEGGSVLLLSGGDINTGVPESDLQDA---------EPDFR 103 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHH-HHHHhhccCCCEEEEcCCccccceEhhhhcCC---------chhHH
Confidence 589999999997533111 24455666633 321 234588999998875432111000 01233
Q ss_pred HHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcc------cc---cc--cccCCCCccce-EEEEeCCeeEEEEEec
Q 006340 111 DVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK------HS---IN--GQLGRKQNVNS-VTVQIGDEKHLFVGFD 178 (649)
Q Consensus 111 ~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~------ys---~~--~~l~~~~~~~~-~~~~~~~g~~~fIglD 178 (649)
-++. + + .=..++||||... + .+.+++ +. .+ ..-.....+.+ ...+.++-++.|||+-
T Consensus 104 ~mN~---~-g-~Da~tlGNHEFD~-----G-~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~ 172 (551)
T PRK09558 104 GMNL---I-G-YDAMAVGNHEFDN-----P-LSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLT 172 (551)
T ss_pred HHhc---C-C-CCEEcccccccCc-----C-HHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEe
Confidence 3332 2 1 2244679999642 1 111111 10 00 00000111223 3456788899999995
Q ss_pred CCCccCCCCCCCCCC-CCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC-CCchhHHHHHHHhC---CceEEE
Q 006340 179 STMSVGLRGPTNLFG-HPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS-SHSGRSLQDIFLKH---SLSAYL 253 (649)
Q Consensus 179 ~~~~pG~~~p~~~~G-~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~-~~~~~~l~~ll~~~---~v~l~L 253 (649)
+...+....|.+..+ .+. +..+.+++..++.+++ .+.+.+|+++|........ .++...-.++.++- ++++++
T Consensus 173 t~~~~~~~~~~~~~~~~f~-d~~e~a~~~v~~Lk~~-~~~D~IV~LsH~G~~~~~~~~~~~~~d~~la~~~~~~~IDvIl 250 (551)
T PRK09558 173 TEDTAKIGNPEYFTDIEFR-DPAEEAKKVIPELKQT-EKPDVIIALTHMGHYDDGEHGSNAPGDVEMARSLPAGGLDMIV 250 (551)
T ss_pred ccccccccCCCCcCCceEC-CHHHHHHHHHHHHHhc-cCCCEEEEEeccccccCCccCCCCccHHHHHHhCCccCceEEE
Confidence 433332222311111 111 2233344444443311 2356899999977642111 01111123445543 699999
Q ss_pred eCcccCCC
Q 006340 254 CGHLHTRF 261 (649)
Q Consensus 254 ~GHtH~~~ 261 (649)
.||+|...
T Consensus 251 gGHsH~~~ 258 (551)
T PRK09558 251 GGHSQDPV 258 (551)
T ss_pred eCCCCccc
Confidence 99999764
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00039 Score=72.35 Aligned_cols=190 Identities=13% Similarity=0.070 Sum_probs=92.1
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHH--HHhccCCcEEEEcCCCCCCCCcchhhhhh------hhHHHHHHHHHHHHHHH
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGP--ALSMISPSLVLITGDLTDGKSKDLLTMKQ------NEVEWMEYQNVMQDVIK 114 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~--~l~~~kPD~VIitGDLtd~~~~~~~~s~Q------~e~eW~~Y~~vl~~L~~ 114 (649)
|++.+|+|-.- ..+.+.+.. ..+..++|++|++||+......+...+.. ...+|..| ++....
T Consensus 1 i~v~Gd~HG~~------~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~---~~g~~~ 71 (262)
T cd00844 1 IAVEGCCHGEL------DKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKY---YSGEKK 71 (262)
T ss_pred CEEEecCCccH------HHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHH---hcCCcc
Confidence 46789999621 223332311 11235799999999997554332211111 12233222 221111
Q ss_pred hcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCcc---ceEEEEeCCeeEEEEEecCCCccCCCC-CCC
Q 006340 115 RSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNV---NSVTVQIGDEKHLFVGFDSTMSVGLRG-PTN 190 (649)
Q Consensus 115 ~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~---~~~~~~~~~g~~~fIglD~~~~pG~~~-p~~ 190 (649)
...|++.|.||||..+. +.....-... ....+ ....+..+ .+.+.++.......... +..
T Consensus 72 ----~p~~t~fi~GNHE~~~~---------l~~l~~gg~v-~~Ni~~Lg~~~v~~~~--GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 72 ----APILTIFIGGNHEASNY---------LWELPYGGWV-APNIYYLGYAGVVNFG--GLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred ----CCeeEEEECCCCCCHHH---------HHhhcCCCee-cCcEEEecCCCEEEEC--CeEEEEecccccccccccccc
Confidence 13578999999997531 1111000000 00000 01233343 36677665432111000 000
Q ss_pred CCCCCCHHHHHHHH-------HHHhcccccCCCCceEEEEEecCCCccCC---------------------CCchhHHHH
Q 006340 191 LFGHPADQLLTEID-------SELSQWNSQSTKPVTKITFGHFPVSFSAS---------------------SHSGRSLQD 242 (649)
Q Consensus 191 ~~G~l~~~qL~wL~-------~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~---------------------~~~~~~l~~ 242 (649)
.....+++++..+- ..|... +...-|+++|.|+..... ....+.+.+
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~-----~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ 210 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQL-----KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEE 210 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhc-----CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHH
Confidence 11234666554321 112211 113579999998663211 112346788
Q ss_pred HHHhCCceEEEeCcccCCCC
Q 006340 243 IFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 243 ll~~~~v~l~L~GHtH~~~g 262 (649)
++++.+-++.+|||.|....
T Consensus 211 ll~~lkPryhf~gH~H~~f~ 230 (262)
T cd00844 211 LLKHLKPRYWFSAHLHVKFA 230 (262)
T ss_pred HHHHhCCCEEEEecCCcccc
Confidence 99999999999999998764
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.8e-05 Score=81.04 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=46.3
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhcc-CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMI-SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~-kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
|++++|||+|.. ...|+++++...+.. ..|.++++||++|.+..... .+..+++.+. .
T Consensus 1 m~~~~IsDIHG~------~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~----------v~~~l~~~~~-----~ 59 (235)
T PHA02239 1 MAIYVVPDIHGE------YQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKD----------VVNYIFDLMS-----N 59 (235)
T ss_pred CeEEEEECCCCC------HHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHH----------HHHHHHHHhh-----c
Confidence 589999999943 245777774322233 35999999999998865321 1222222211 1
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
..+++.++||||..
T Consensus 60 ~~~~~~l~GNHE~~ 73 (235)
T PHA02239 60 DDNVVTLLGNHDDE 73 (235)
T ss_pred CCCeEEEECCcHHH
Confidence 24789999999973
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.1e-05 Score=87.74 Aligned_cols=91 Identities=21% Similarity=0.234 Sum_probs=54.0
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHh---------ccCCcEEEEcCCCCCCCCcchh--hhhhhhHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALS---------MISPSLVLITGDLTDGKSKDLL--TMKQNEVEWMEYQNV 108 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~---------~~kPD~VIitGDLtd~~~~~~~--~s~Q~e~eW~~Y~~v 108 (649)
.++++++||+|++.... ....++.++ +.++ ..+||.++++||+++....... ......+-.+.|+.+
T Consensus 243 ~~~i~~ISDlHlgs~~~-~~~~l~~li-~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 243 KVYAVFISDVHVGSKEF-LEDAFEKFI-DWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred ccEEEEEcccCCCCcch-hHHHHHHHH-HHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 48999999999987432 122455665 4455 5689999999999996431100 000001112223333
Q ss_pred HHHHHHhcCCCCceEEEecCCCCCCC
Q 006340 109 MQDVIKRSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 109 l~~L~~~~~l~~~p~~~I~GNHD~~~ 134 (649)
.+.+... ....|++.++||||...
T Consensus 321 ~~~L~~L--~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 321 AEYLKQI--PEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHhh--hcCCeEEEecCCCcchh
Confidence 3333332 13469999999999853
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=82.16 Aligned_cols=208 Identities=11% Similarity=0.022 Sum_probs=88.5
Q ss_pred CCceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchh---------------hhhhhhHH-
Q 006340 38 EHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLL---------------TMKQNEVE- 101 (649)
Q Consensus 38 ~~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~---------------~s~Q~e~e- 101 (649)
.+.++|+..|+-+.... +.....+.++..+||++|++||.+........ ......++
T Consensus 103 ~~~~r~a~~SC~~~~~~-------~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~y 175 (453)
T PF09423_consen 103 PDPFRFAFGSCQNYEDG-------YFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDY 175 (453)
T ss_dssp ---EEEEEE----CCC----------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHH
T ss_pred CCceEEEEECCCCcccC-------hHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHH
Confidence 34699999999986421 12333333333689999999999865531000 00112222
Q ss_pred ---HHHHH--HHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCch-------h----------hhcccccccccCCCCc
Q 006340 102 ---WMEYQ--NVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSF-------D----------FFSKHSINGQLGRKQN 159 (649)
Q Consensus 102 ---W~~Y~--~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~-------~----------~~~~ys~~~~l~~~~~ 159 (649)
|+.|. .-++++. ..+|++.|.=+||..+-...++.. + .|..|.........+.
T Consensus 176 R~~y~~~~~~p~l~~~~-----~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~ 250 (453)
T PF09423_consen 176 RRRYRQYRSDPDLRRLH-----ANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGD 250 (453)
T ss_dssp HHHHHHHHT-HHHHHHH-----HHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTT
T ss_pred HHHHHHHcCCHHHHHHh-----hcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCC
Confidence 22222 1223332 246999999999996543322211 0 1111211110000000
Q ss_pred cceEEEEeCCee-EEEEEecCCCccCCCC-C----------CCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecC
Q 006340 160 VNSVTVQIGDEK-HLFVGFDSTMSVGLRG-P----------TNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFP 227 (649)
Q Consensus 160 ~~~~~~~~~~g~-~~fIglD~~~~pG~~~-p----------~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P 227 (649)
...+...+..|+ +.|+.+|.-.+..... + ....-.+.++|.+||++.|++.. ..+.|+..-.|
T Consensus 251 ~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~-----a~~kvi~s~v~ 325 (453)
T PF09423_consen 251 QGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASSQ-----ATWKVIGSSVP 325 (453)
T ss_dssp B----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-------SSEEEEE-SS-
T ss_pred CCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcCC-----CcEEEEEeCCc
Confidence 011222233345 9999999876554211 0 01123688999999999998643 35788887666
Q ss_pred CCccC-----------------CCCchhHHHHHHHhCCc--eEEEeCcccCCCC
Q 006340 228 VSFSA-----------------SSHSGRSLQDIFLKHSL--SAYLCGHLHTRFG 262 (649)
Q Consensus 228 ~~~~~-----------------~~~~~~~l~~ll~~~~v--~l~L~GHtH~~~g 262 (649)
+.... ....+++|.+.|++.++ .++|||-.|....
T Consensus 326 ~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~ 379 (453)
T PF09423_consen 326 FSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAA 379 (453)
T ss_dssp -S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEE
T ss_pred eecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchhee
Confidence 54211 11234678899988775 5999999998863
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00059 Score=71.88 Aligned_cols=203 Identities=13% Similarity=0.102 Sum_probs=95.4
Q ss_pred eEEEEEcCCCCCCCCC----CcHHHHHHHHHHHHhc-----cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP----DRASDFKRIVGPALSM-----ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQD 111 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~----~~~~~l~~~i~~~l~~-----~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~ 111 (649)
++++|.+|+|-.-... .-..++..++++ +++ ...-+++-.||........... + . +..++.
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~-~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~--~----g---~~~~~~ 70 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDG-VRREVAAQGGYVLLLSGGDINTGVPESDLQ--D----A---EPDFRG 70 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHH-HHHHhhccCCCEEEEeCCCcCCCchhHHhc--C----c---chHHHH
Confidence 4799999999653211 123455666633 322 2345899999998554321110 0 0 112333
Q ss_pred HHHhcCCCCceEEEecCCCCCCCCCCCCCchhhh--ccccc-cccc---CCCCccce-EEEEeCCeeEEEEEecCCCccC
Q 006340 112 VIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFF--SKHSI-NGQL---GRKQNVNS-VTVQIGDEKHLFVGFDSTMSVG 184 (649)
Q Consensus 112 L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~--~~ys~-~~~l---~~~~~~~~-~~~~~~~g~~~fIglD~~~~pG 184 (649)
++. +. .=..++||||...-.. ...+.. .++.. ...+ .....+.+ ..++.++-++.|+++-+...+.
T Consensus 71 ~n~---~g--~Da~~~GNHEfD~G~~--~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~ 143 (285)
T cd07405 71 MNL---VG--YDAMAVGNHEFDNPLE--VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAK 143 (285)
T ss_pred HHh---hC--CcEEeecccccccCHH--HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEeccccccc
Confidence 332 11 2244679999752110 000000 01100 0000 00111222 3455678899999995443332
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC---C-CchhHHHHHHHhCCceEEEeCcccCC
Q 006340 185 LRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS---S-HSGRSLQDIFLKHSLSAYLCGHLHTR 260 (649)
Q Consensus 185 ~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~---~-~~~~~l~~ll~~~~v~l~L~GHtH~~ 260 (649)
...|.+..+..=.+.++.+++.+++.++ .+.+.+|++.|........ . ....++.+.+...++++++.||+|..
T Consensus 144 ~~~~~~~~~~~f~d~~~~~~~~v~~lk~--~~~D~VI~lsH~G~~~~~~~~~~~~~~~~lA~~~~~~giD~IigGHsH~~ 221 (285)
T cd07405 144 IGNPAYFEGIEFRPPIHEAKEVVPELKQ--EKPDIVIAATHMGHYDNGEHGSNAPGDVEMARALPAGGLDLIVGGHSQDP 221 (285)
T ss_pred ccCcCCcCCcEEcCHHHHHHHHHHHHHH--cCCCEEEEEecccccCCccccccCchHHHHHHhcCCCCCCEEEeCCCCcc
Confidence 1122111121111233334444444432 1346899999987643110 0 01123333332246999999999987
Q ss_pred CC
Q 006340 261 FG 262 (649)
Q Consensus 261 ~g 262 (649)
..
T Consensus 222 ~~ 223 (285)
T cd07405 222 VC 223 (285)
T ss_pred cc
Confidence 63
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=2.1e-05 Score=76.14 Aligned_cols=70 Identities=20% Similarity=0.148 Sum_probs=44.4
Q ss_pred EEEcCCCCCCCCCC--------cHH-HHHHHHHHHHhc--cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 44 VQLSDLHFSVHHPD--------RAS-DFKRIVGPALSM--ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 44 v~ISDlHls~~~~~--------~~~-~l~~~i~~~l~~--~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
..+||+|++..... ..+ ..++++ +.+++ .++|.|+++||+++...... +.+.+++
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~d~vi~~GDl~~~~~~~~------------~~~~l~~- 67 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALI-RNWNETVGPDDTVYHLGDFSFGGKAGT------------ELELLSR- 67 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHH-HHHhhhcCCCCEEEEeCCCCCCCChHH------------HHHHHHh-
Confidence 47999999986421 112 233444 44433 37899999999999765321 1123333
Q ss_pred HHhcCCCCceEEEecCCCCCC
Q 006340 113 IKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 113 ~~~~~l~~~p~~~I~GNHD~~ 133 (649)
+ +.|++.|+||||..
T Consensus 68 -----~-~~~~~~v~GNHD~~ 82 (168)
T cd07390 68 -----L-NGRKHLIKGNHDSS 82 (168)
T ss_pred -----C-CCCeEEEeCCCCch
Confidence 2 24899999999975
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=80.61 Aligned_cols=90 Identities=20% Similarity=0.349 Sum_probs=54.8
Q ss_pred CCceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-----cCCcEEEEcCCCCCCCCc-----chhhhhhhhHHHHHHHH
Q 006340 38 EHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSM-----ISPSLVLITGDLTDGKSK-----DLLTMKQNEVEWMEYQN 107 (649)
Q Consensus 38 ~~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-----~kPD~VIitGDLtd~~~~-----~~~~s~Q~e~eW~~Y~~ 107 (649)
++.+++++|||+|.+... -....|.+++ +.++. .+...++++||++|.-.. +........+.++...+
T Consensus 223 ~e~v~v~~isDih~GSk~-F~~~~f~~fi-~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~ 300 (481)
T COG1311 223 DERVYVALISDIHRGSKE-FLEDEFEKFI-DWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAE 300 (481)
T ss_pred CcceEEEEEeeeecccHH-HHHHHHHHHH-HHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHH
Confidence 356999999999998642 1223566666 44543 245789999999995421 11111111222333444
Q ss_pred HHHHHHHhcCCCCceEEEecCCCCCCC
Q 006340 108 VMQDVIKRSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 108 vl~~L~~~~~l~~~p~~~I~GNHD~~~ 134 (649)
.+.++ .+.+.++.+|||||...
T Consensus 301 ~L~~v-----p~~I~v~i~PGnhDa~r 322 (481)
T COG1311 301 FLDQV-----PEHIKVFIMPGNHDAVR 322 (481)
T ss_pred HHhhC-----CCCceEEEecCCCCccc
Confidence 44443 24568999999999863
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=3.9e-05 Score=77.56 Aligned_cols=82 Identities=24% Similarity=0.334 Sum_probs=58.6
Q ss_pred ceEEEEEcCCCCCCCC---------CC-cHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHH---------PD-RASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVM 109 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~---------~~-~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl 109 (649)
.-+.+.+||+|++... |. ..+.+.+.+.+.++..+|+-+|+.||+-++-.... ..||...+.++
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~------~~e~~~~~~f~ 92 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSL------RQEKEEVREFL 92 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccc------cccHHHHHHHH
Confidence 3578999999998653 21 23455666656677899999999999998776532 23566666666
Q ss_pred HHHHHhcCCCCceEEEecCCCCCC
Q 006340 110 QDVIKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 110 ~~L~~~~~l~~~p~~~I~GNHD~~ 133 (649)
+.+.. .-|..++||||..
T Consensus 93 ~~~~~------~evi~i~GNHD~~ 110 (235)
T COG1407 93 ELLDE------REVIIIRGNHDNG 110 (235)
T ss_pred HHhcc------CcEEEEeccCCCc
Confidence 65432 2499999999986
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=7.2e-05 Score=78.28 Aligned_cols=68 Identities=19% Similarity=0.311 Sum_probs=48.7
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
|+++.|||+|-.. ..|++++.+ ++ ..++|.++++||++|.+.... ++++.+.+ +
T Consensus 1 M~~~vIGDIHG~~------~~l~~ll~~-~~~~~~~D~li~lGDlVdrGp~s~--------------~vl~~l~~---l- 55 (275)
T PRK00166 1 MATYAIGDIQGCY------DELQRLLEK-IDFDPAKDTLWLVGDLVNRGPDSL--------------EVLRFVKS---L- 55 (275)
T ss_pred CcEEEEEccCCCH------HHHHHHHHh-cCCCCCCCEEEEeCCccCCCcCHH--------------HHHHHHHh---c-
Confidence 5789999999543 457777733 43 246899999999999887542 35555544 2
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
+.++..|+||||..
T Consensus 56 ~~~~~~VlGNHD~~ 69 (275)
T PRK00166 56 GDSAVTVLGNHDLH 69 (275)
T ss_pred CCCeEEEecChhHH
Confidence 23688999999984
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.001 Score=82.99 Aligned_cols=207 Identities=18% Similarity=0.208 Sum_probs=99.9
Q ss_pred ceEEEEEcCCCCCCCC-------CC---cHHHHHHHHHHHHhccCCcEEE-EcCCCCCCCCcchhhhhhhhHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHH-------PD---RASDFKRIVGPALSMISPSLVL-ITGDLTDGKSKDLLTMKQNEVEWMEYQNV 108 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~-------~~---~~~~l~~~i~~~l~~~kPD~VI-itGDLtd~~~~~~~~s~Q~e~eW~~Y~~v 108 (649)
.++|++.+|+|-.-.. +. -..++..+++ .+++..|+.++ -.||++...................-+..
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~-~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~ 119 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIK-KARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPM 119 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHH-HHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHH
Confidence 5899999999965221 11 1346677774 35555676555 59999986642100000000000000123
Q ss_pred HHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc-------ccc---CCCCccceEE-EEe---------C
Q 006340 109 MQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN-------GQL---GRKQNVNSVT-VQI---------G 168 (649)
Q Consensus 109 l~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~-------~~l---~~~~~~~~~~-~~~---------~ 168 (649)
++.++. +. .=..++||||... + .+.+.+.... ... .....+.+|. .+. +
T Consensus 120 i~~mN~---lg--yDa~~lGNHEFd~-----G-~~~L~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~ 188 (1163)
T PRK09419 120 IKAMNA---LG--YDAGTLGNHEFNY-----G-LDFLDGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQ 188 (1163)
T ss_pred HHHHhh---cC--ccEEeeccccccc-----C-HHHHHHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCC
Confidence 344433 21 2355799999642 1 1112111000 000 0011122333 334 5
Q ss_pred CeeEEEEEecCCCccCCCCCCCCCCCC-CHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC-CCchhHHHHHHHh
Q 006340 169 DEKHLFVGFDSTMSVGLRGPTNLFGHP-ADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS-SHSGRSLQDIFLK 246 (649)
Q Consensus 169 ~g~~~fIglD~~~~pG~~~p~~~~G~l-~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~-~~~~~~l~~ll~~ 246 (649)
+-++.|||+-+...+....+ +..|.+ -.+..+-+++.+++.+++ ..+.+|++.|........ ........++.++
T Consensus 189 gvkIgiiG~~~p~~~~~~~~-~~~g~~~~~d~v~~~~~~v~~lk~~--gaDvII~l~H~G~~~~~~~~~~en~~~~la~~ 265 (1163)
T PRK09419 189 GVKVGYIGFVPPQIMTWDKK-NLKGKVEVKNIVEEANKTIPEMKKG--GADVIVALAHSGIESEYQSSGAEDSVYDLAEK 265 (1163)
T ss_pred CeEEEEEecCCcchhhcchh-hccCcEEECCHHHHHHHHHHHHHhc--CCCEEEEEeccCcCCCCCCCCcchHHHHHHHh
Confidence 66889999854222211111 122311 122344455555544322 346899999987654221 1122234566655
Q ss_pred C-CceEEEeCcccCCC
Q 006340 247 H-SLSAYLCGHLHTRF 261 (649)
Q Consensus 247 ~-~v~l~L~GHtH~~~ 261 (649)
- ++++++.||+|...
T Consensus 266 ~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 266 TKGIDAIVAGHQHGLF 281 (1163)
T ss_pred CCCCcEEEeCCCcccc
Confidence 4 59999999999985
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0012 Score=75.26 Aligned_cols=201 Identities=14% Similarity=0.127 Sum_probs=105.1
Q ss_pred CceEEEEEcCCCCCCCC---CC------cHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHH---PD------RASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVM 109 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~---~~------~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl 109 (649)
..++|+|.+|+|-.-.. .. ........+++.-++.+..++|-.||+.+....... ..+ .+.--+++
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~----g~~~~~~m 99 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTK----GEPTVDLL 99 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccC----CChHHHHH
Confidence 46999999999976551 11 122344555333234456789999999998543211 000 01111333
Q ss_pred HHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccc---------cc--cc-cCCCCccc-eEEEEeCCeeEEEEE
Q 006340 110 QDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHS---------IN--GQ-LGRKQNVN-SVTVQIGDEKHLFVG 176 (649)
Q Consensus 110 ~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys---------~~--~~-l~~~~~~~-~~~~~~~~g~~~fIg 176 (649)
..+ + .=....|||+...- .+.+.++. .+ .. -.....+. ....+.++-++.+||
T Consensus 100 N~m------~--yDa~tiGNHEFd~g------~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG 165 (517)
T COG0737 100 NAL------G--YDAMTLGNHEFDYG------LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIG 165 (517)
T ss_pred hhc------C--CcEEeecccccccC------HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEE
Confidence 332 1 33568999998531 11111111 00 00 00111112 345667788999999
Q ss_pred ecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC-CchhHHHHHHHhCCceEEEeC
Q 006340 177 FDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS-HSGRSLQDIFLKHSLSAYLCG 255 (649)
Q Consensus 177 lD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~-~~~~~l~~ll~~~~v~l~L~G 255 (649)
+.+...+....+....+..-.+..+++++.+.+.+.+ ..+.+|+++|-+....... ........+.. .++++++.|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~--~vD~iI~LsH~G~~~d~~~~~~~~~~~~~~~-~~iD~i~~G 242 (517)
T COG0737 166 LTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGE--GVDVIIALSHLGIEDDLELASEVPGDVDVAV-PGIDLIIGG 242 (517)
T ss_pred ecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhc--CCCEEEEEeccCcCccccccccccccccccc-cCcceEecc
Confidence 9754444333332122222235667777777766532 1468999999877632111 11111111111 239999999
Q ss_pred cccCCC
Q 006340 256 HLHTRF 261 (649)
Q Consensus 256 HtH~~~ 261 (649)
|+|...
T Consensus 243 H~H~~~ 248 (517)
T COG0737 243 HSHTVF 248 (517)
T ss_pred CCcccc
Confidence 999764
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0015 Score=68.76 Aligned_cols=201 Identities=17% Similarity=0.109 Sum_probs=92.0
Q ss_pred CCCceEEEEEcCCCCCCC--C--C---CcHHHHHHHH---HHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHH
Q 006340 37 PEHVIWAVQLSDLHFSVH--H--P---DRASDFKRIV---GPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEY 105 (649)
Q Consensus 37 p~~~~~fv~ISDlHls~~--~--~---~~~~~l~~~i---~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y 105 (649)
|-..++|+|.+|+|-.-. . + .....+.+++ .+..++..|+ +++-.||..+......... ..++..
T Consensus 2 ~~~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~----~~g~~~ 77 (282)
T cd07407 2 PWGDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASP----PPGSYS 77 (282)
T ss_pred CcceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeec----CCChHH
Confidence 445689999999995321 1 1 1122333333 2222334555 6677999998653211000 011222
Q ss_pred HHHHHHHHHhcCCCCceEEEecCCCCCCCCCC-CCCchhhhc--ccc---cc---ccc--CCCCccceE-EEEeC-CeeE
Q 006340 106 QNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPI-VGGSFDFFS--KHS---IN---GQL--GRKQNVNSV-TVQIG-DEKH 172 (649)
Q Consensus 106 ~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~-~~~~~~~~~--~ys---~~---~~l--~~~~~~~~~-~~~~~-~g~~ 172 (649)
.+++..+ . .=..++||||...-.. ++......+ ++. .+ ..- .......+| .++.+ +-++
T Consensus 78 ~~~mN~m------g--yDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kI 149 (282)
T cd07407 78 NPIFRMM------P--YDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRV 149 (282)
T ss_pred HHHHHhc------C--CcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEE
Confidence 2333332 1 2356899999853110 000000111 110 00 000 000111123 33444 7789
Q ss_pred EEEEecCCCccCCCCCCCCCCCCCH-HHH--HHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHH-HHHHhC-
Q 006340 173 LFVGFDSTMSVGLRGPTNLFGHPAD-QLL--TEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQ-DIFLKH- 247 (649)
Q Consensus 173 ~fIglD~~~~pG~~~p~~~~G~l~~-~qL--~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~-~ll~~~- 247 (649)
.+||+-+...+... ..-..+. +.+ +|+.++|++ .+.+.+|+++|...... .+. .+.. .+.++.
T Consensus 150 giiGltt~~~~~~~----~~~f~d~~~~~~~~~v~~~l~~-----~~~DvIIvlsH~G~~~d--~~~-~~~~~~la~~~~ 217 (282)
T cd07407 150 LAFGFLFDFKGAAN----GVTVQPVADVVQEPWFQDAINN-----EDVDLILVLGHMPVRDD--AEF-KVLHDAIRKIFP 217 (282)
T ss_pred EEEEEecccccCCC----CcEEcCHHHHHHHHHHHHHHHh-----cCCCEEEEEeCCCCCCC--ccH-HHHHHHHHHhCC
Confidence 99999433221100 0001111 112 255555652 13468999999876532 111 1222 333334
Q ss_pred Cce-EEEeCcccCCC
Q 006340 248 SLS-AYLCGHLHTRF 261 (649)
Q Consensus 248 ~v~-l~L~GHtH~~~ 261 (649)
+++ ++++||+|...
T Consensus 218 ~id~~Ii~GHsH~~~ 232 (282)
T cd07407 218 DTPIQFLGGHSHVRD 232 (282)
T ss_pred CCCEEEEeCCccccc
Confidence 366 79999999763
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.64 E-value=9.8e-05 Score=73.97 Aligned_cols=65 Identities=22% Similarity=0.368 Sum_probs=46.3
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
|++.|||+|-. ...|++++ +.++ ..++|.++++||++|.+.... ++++.+..
T Consensus 2 ri~~isDiHg~------~~~l~~~l-~~~~~~~~~d~~~~~GD~v~~g~~~~--------------~~~~~l~~------ 54 (207)
T cd07424 2 RDFVVGDIHGH------YSLLQKAL-DAVGFDPARDRLISVGDLIDRGPESL--------------ACLELLLE------ 54 (207)
T ss_pred CEEEEECCCCC------HHHHHHHH-HHcCCCCCCCEEEEeCCcccCCCCHH--------------HHHHHHhc------
Confidence 68999999932 24677777 3343 246899999999999876431 34555432
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
.+++.++||||..
T Consensus 55 ~~~~~v~GNhe~~ 67 (207)
T cd07424 55 PWFHAVRGNHEQM 67 (207)
T ss_pred CCEEEeECCChHH
Confidence 2689999999985
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00026 Score=71.18 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=45.8
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHh--------ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHh
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALS--------MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKR 115 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~--------~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~ 115 (649)
+.|||+|-.. +.|++++ +.++ ..+.|.++++||++|.+...... . +.+.++...
T Consensus 1 ~vi~DIHG~~------~~l~~ll-~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~v----------l-~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGDL------DAFREIL-KGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEI----------L-WLLYKLEQE 62 (208)
T ss_pred CEEeCccCCH------HHHHHHH-HHCCCCCccccccCCCcEEEEECCCcCCCcCHHHH----------H-HHHHHHHHH
Confidence 4799999653 3677777 3333 24689999999999988653211 1 122222211
Q ss_pred cCCCCceEEEecCCCCCCC
Q 006340 116 SGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 116 ~~l~~~p~~~I~GNHD~~~ 134 (649)
..-.+.+++.++||||...
T Consensus 63 ~~~~~~~v~~l~GNHE~~~ 81 (208)
T cd07425 63 AAKAGGKVHFLLGNHELMN 81 (208)
T ss_pred HHhcCCeEEEeeCCCcHHH
Confidence 0011358999999999864
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00019 Score=72.60 Aligned_cols=65 Identities=22% Similarity=0.313 Sum_probs=47.3
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
++..|||+|-.. +.|++++ +.++. .+.|.++++||++|.+.... ++++.+.+
T Consensus 18 ri~vigDIHG~~------~~L~~lL-~~i~~~~~~D~li~lGDlvDrGp~s~--------------~vl~~l~~------ 70 (218)
T PRK11439 18 HIWLVGDIHGCF------EQLMRKL-RHCRFDPWRDLLISVGDLIDRGPQSL--------------RCLQLLEE------ 70 (218)
T ss_pred eEEEEEcccCCH------HHHHHHH-HhcCCCcccCEEEEcCcccCCCcCHH--------------HHHHHHHc------
Confidence 899999999653 4678887 33433 36799999999999987542 35555532
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
..++.|+||||..
T Consensus 71 ~~~~~v~GNHE~~ 83 (218)
T PRK11439 71 HWVRAVRGNHEQM 83 (218)
T ss_pred CCceEeeCchHHH
Confidence 1467899999974
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0034 Score=72.24 Aligned_cols=192 Identities=16% Similarity=0.104 Sum_probs=92.9
Q ss_pred eEEEEEcCCCCCCCC---------------CCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHH
Q 006340 41 IWAVQLSDLHFSVHH---------------PDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWME 104 (649)
Q Consensus 41 ~~fv~ISDlHls~~~---------------~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~ 104 (649)
++|+|++|+|-.-.. ..-..++...+++ +++ .+..+++..||.+........ .+-+
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~-~r~~~~n~l~ldaGD~~~gs~~~~~--~~g~----- 72 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINK-LRAESKNALVLHAGDAIIGTLYFTL--FGGR----- 72 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHH-HHhhCCCeEEEECCCCCCCccchhh--cCCH-----
Confidence 479999999954211 0124456667743 433 334688999999876542211 1101
Q ss_pred HHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhc--ccc---cc---ccc-CCCCccc-eEEEEeCCeeEEE
Q 006340 105 YQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFS--KHS---IN---GQL-GRKQNVN-SVTVQIGDEKHLF 174 (649)
Q Consensus 105 Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~--~ys---~~---~~l-~~~~~~~-~~~~~~~~g~~~f 174 (649)
..++-++. +. .=..++||||...-.. ...+... ++. .+ ..- .....+. ...++.++.++.|
T Consensus 73 --~~i~~~N~---~g--~Da~~lGNHEFd~G~~--~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgi 143 (550)
T TIGR01530 73 --ADAALMNA---AG--FDFFTLGNHEFDAGNE--GLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAI 143 (550)
T ss_pred --HHHHHHhc---cC--CCEEEeccccccCCHH--HHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEE
Confidence 12333322 21 3466899999642110 0011111 111 00 000 0001112 3445678889999
Q ss_pred EEecCCCccC-CCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHh-CCceEE
Q 006340 175 VGFDSTMSVG-LRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLK-HSLSAY 252 (649)
Q Consensus 175 IglD~~~~pG-~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~-~~v~l~ 252 (649)
||+.+..... ...|.... .+ .+.++-+++..++.+++ ..+.+|+++|.-... + .++.++ .+++++
T Consensus 144 iGl~~~~~~~~~~~~~~~~-~f-~d~~~~~~~~v~~Lk~~--g~D~II~lsH~g~~~-----d----~~la~~~~~iD~I 210 (550)
T TIGR01530 144 IGLDTVKKTVESSSPGKDI-KF-IDEIAAAQIAANALKQQ--GINKIILLSHAGFEK-----N----CEIAQKINDIDVI 210 (550)
T ss_pred EEeecCcccccccCCCCce-EE-CCHHHHHHHHHHHHHhC--CCCEEEEEecCCcHH-----H----HHHHhcCCCCCEE
Confidence 9995422110 01111000 11 12233344433333321 246899999965421 1 233333 259999
Q ss_pred EeCcccCCCC
Q 006340 253 LCGHLHTRFG 262 (649)
Q Consensus 253 L~GHtH~~~g 262 (649)
++||+|...+
T Consensus 211 igGHsH~~~~ 220 (550)
T TIGR01530 211 VSGDSHYLLG 220 (550)
T ss_pred EeCCCCcccc
Confidence 9999999753
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00026 Score=72.30 Aligned_cols=70 Identities=20% Similarity=0.221 Sum_probs=46.3
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc----------cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSM----------ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQ 110 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~----------~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~ 110 (649)
++++.|||+|-.. ..|++++++ +.- .+.|.++++||++|.+.... ++++
T Consensus 1 ~~i~vigDIHG~~------~~L~~ll~~-~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~--------------evl~ 59 (234)
T cd07423 1 GPFDIIGDVHGCY------DELEELLEK-LGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSP--------------EVLR 59 (234)
T ss_pred CCeEEEEECCCCH------HHHHHHHHH-cCCccccCccccCCCCCEEEEECCccCCCCCHH--------------HHHH
Confidence 4789999999643 467887733 411 13689999999999887532 2333
Q ss_pred HHHHhcCCCCceEEEecCCCCCC
Q 006340 111 DVIKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 111 ~L~~~~~l~~~p~~~I~GNHD~~ 133 (649)
.+.+.. .+..++.++||||..
T Consensus 60 ~l~~l~--~~~~~~~v~GNHE~~ 80 (234)
T cd07423 60 LVMSMV--AAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHh--hCCcEEEEECCcHHH
Confidence 333211 112578999999974
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0093 Score=69.85 Aligned_cols=202 Identities=16% Similarity=0.194 Sum_probs=95.7
Q ss_pred ceEEEEEcCCCCCCCC-------CC---cHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhh----hhhHHHHH
Q 006340 40 VIWAVQLSDLHFSVHH-------PD---RASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMK----QNEVEWME 104 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~-------~~---~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~----Q~e~eW~~ 104 (649)
.++|++.+|+|-.-.. +. -..++..++++ +++..+ -+++-.||++........... +.+.
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~-~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~---- 99 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKA-ARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDV---- 99 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHH-HHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCc----
Confidence 5899999999965321 11 12456666633 443333 588999999986543110000 0000
Q ss_pred HHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc-------ccc----CCCCccceEEE-Ee-----
Q 006340 105 YQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN-------GQL----GRKQNVNSVTV-QI----- 167 (649)
Q Consensus 105 Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~-------~~l----~~~~~~~~~~~-~~----- 167 (649)
+-.++.++. +. -=....||||... + .+++.+.... ... .....+.+|.+ +.
T Consensus 100 -~p~i~amN~---lg--yDa~tlGNHEFd~-----G-~~~L~~~~~~a~fP~l~ANv~~~~~~~~~~~py~I~e~~v~~~ 167 (649)
T PRK09420 100 -HPVYKAMNT---LD--YDVGNLGNHEFNY-----G-LDYLKKALAGAKFPYVNANVIDAKTGKPLFTPYLIKEKEVKDK 167 (649)
T ss_pred -chHHHHHHh---cC--CcEEeccchhhhc-----C-HHHHHHHHhcCCCCEEEEEEEecCCCCcccCCeEEEEEEeecc
Confidence 013444433 21 2355899999642 1 1122211000 000 01111223332 22
Q ss_pred CC----eeEEEEEecCCCccCCCCCCCCCCCCC-HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHH
Q 006340 168 GD----EKHLFVGFDSTMSVGLRGPTNLFGHPA-DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQD 242 (649)
Q Consensus 168 ~~----g~~~fIglD~~~~pG~~~p~~~~G~l~-~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ 242 (649)
++ -++-|||+=+...+....+ +..|.+. .+..+.+++...+.+++ ....+|++.|.........+..+....
T Consensus 168 ~G~~~~vkIGiIGl~~p~~~~w~~~-~~~g~v~~~D~ve~a~~~v~~Lk~~--gaDvII~LsH~G~~~d~~~~~aen~~~ 244 (649)
T PRK09420 168 DGKEHTIKIGYIGFVPPQIMVWDKA-NLEGKVTVRDITETARKYVPEMKEK--GADIVVAIPHSGISADPYKAMAENSVY 244 (649)
T ss_pred CCCccceEEEEEEecCccccccccc-cCcCceEECCHHHHHHHHHHHHHHc--CCCEEEEEecCCcCCCCccccccchhH
Confidence 22 3788999843222111111 2233221 23344455555544422 346899999987643211101111111
Q ss_pred HHHh-CCceEEEeCcccCCC
Q 006340 243 IFLK-HSLSAYLCGHLHTRF 261 (649)
Q Consensus 243 ll~~-~~v~l~L~GHtH~~~ 261 (649)
.+.+ -++++++.||+|...
T Consensus 245 ~l~~v~gID~Il~GHsH~~~ 264 (649)
T PRK09420 245 YLSEVPGIDAIMFGHSHAVF 264 (649)
T ss_pred HHhcCCCCCEEEeCCCCccC
Confidence 2344 359999999999875
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0065 Score=70.89 Aligned_cols=204 Identities=16% Similarity=0.193 Sum_probs=95.6
Q ss_pred ceEEEEEcCCCCCCCC-------CC---cHHHHHHHHHHHHhcc-CCcEEEEcCCCCCCCCcchhhhhhh--hHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHH-------PD---RASDFKRIVGPALSMI-SPSLVLITGDLTDGKSKDLLTMKQN--EVEWMEYQ 106 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~-------~~---~~~~l~~~i~~~l~~~-kPD~VIitGDLtd~~~~~~~~s~Q~--e~eW~~Y~ 106 (649)
.++|+|.+|+|-.-.. +. -..++..++++ +++. ...+++-.||++...........+. +.+. +
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~-~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~---~ 77 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQ-ARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQM---H 77 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHH-HHhhCCCeEEEECCCcCCCccchhhhhhccccCCCc---C
Confidence 3799999999975321 11 12456667743 4333 3468899999998654321000000 0000 0
Q ss_pred HHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc-------ccc----CCCCccceEEE-Ee-----C-
Q 006340 107 NVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN-------GQL----GRKQNVNSVTV-QI-----G- 168 (649)
Q Consensus 107 ~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~-------~~l----~~~~~~~~~~~-~~-----~- 168 (649)
-+++.++. +. .=....||||... + .+++.+.... ..+ .....+.+|.+ +. +
T Consensus 78 p~~~~mN~---lg--yDa~tlGNHEFd~-----G-~~~L~~~~~~a~fP~l~aNv~~~~~~~~~~~py~I~~~~~~~~~G 146 (626)
T TIGR01390 78 PVYKAMNL---LK--YDVGNLGNHEFNY-----G-LPFLKQAIAAAKFPIVNANVVDAGTGQPAFTPYLIQERSVVDTDG 146 (626)
T ss_pred hHHHHHhh---cC--ccEEecccccccc-----c-HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCeEEEEEEeeccCC
Confidence 12333332 21 2345899999532 1 1222211000 000 01112223333 22 2
Q ss_pred ---CeeEEEEEecCCCccCCCCCCCCCCCCC-HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHH
Q 006340 169 ---DEKHLFVGFDSTMSVGLRGPTNLFGHPA-DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIF 244 (649)
Q Consensus 169 ---~g~~~fIglD~~~~pG~~~p~~~~G~l~-~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll 244 (649)
+-++-|||+=+...+....+ +..|.+. .+.++-+++...+.+++ ..+.+|++.|............+.....+
T Consensus 147 ~~~~~kIGiIG~~~p~~~~~~~~-~~~g~v~~~d~veaa~~~v~~Lr~~--gaDvII~LsH~G~~~d~~~~~~en~~~~l 223 (626)
T TIGR01390 147 KPHTLKVGYIGFVPPQIMVWDKA-NLDGKVTTADIVDTARKYVPEMKAK--GADIIVALAHSGISADPYQPGAENSAYYL 223 (626)
T ss_pred CccceEEEEEEecCccccccccc-cccCceEECCHHHHHHHHHHHHHHc--CCCEEEEEeccCcCCCccccccchHHHHH
Confidence 23788999843322211111 1223211 22334444444444321 34689999998765321111111122234
Q ss_pred HhC-CceEEEeCcccCCC
Q 006340 245 LKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 245 ~~~-~v~l~L~GHtH~~~ 261 (649)
++- +++++++||+|...
T Consensus 224 ~~v~gID~Il~GHsH~~~ 241 (626)
T TIGR01390 224 TKVPGIDAVLFGHSHAVF 241 (626)
T ss_pred hcCCCCCEEEcCCCCccC
Confidence 443 59999999999876
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00038 Score=72.19 Aligned_cols=65 Identities=18% Similarity=0.305 Sum_probs=46.4
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
..|||+|-.. ..|++++++ ++ ..+.|.++++||++|.+.... ++++.+.+ +. ..
T Consensus 2 yvIGDIHG~~------~~L~~LL~~-i~~~~~~D~Li~lGDlVdRGp~s~--------------evl~~l~~---l~-~~ 56 (257)
T cd07422 2 YAIGDIQGCY------DELQRLLEK-INFDPAKDRLWLVGDLVNRGPDSL--------------ETLRFVKS---LG-DS 56 (257)
T ss_pred EEEECCCCCH------HHHHHHHHh-cCCCCCCCEEEEecCcCCCCcCHH--------------HHHHHHHh---cC-CC
Confidence 5799999643 467888843 43 236799999999999987543 35555544 21 36
Q ss_pred EEEecCCCCCC
Q 006340 123 FYDIRGNHDNF 133 (649)
Q Consensus 123 ~~~I~GNHD~~ 133 (649)
+..|+||||..
T Consensus 57 v~~VlGNHD~~ 67 (257)
T cd07422 57 AKTVLGNHDLH 67 (257)
T ss_pred eEEEcCCchHH
Confidence 88999999985
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00036 Score=70.61 Aligned_cols=65 Identities=23% Similarity=0.342 Sum_probs=46.5
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
|+..|||+|-. ...|++++.+ +. ..+.|.++++||++|.+.... ++++.+.+
T Consensus 16 ri~visDiHg~------~~~l~~~l~~-~~~~~~~d~l~~lGD~vdrG~~~~--------------~~l~~l~~------ 68 (218)
T PRK09968 16 HIWVVGDIHGE------YQLLQSRLHQ-LSFCPETDLLISVGDNIDRGPESL--------------NVLRLLNQ------ 68 (218)
T ss_pred eEEEEEeccCC------HHHHHHHHHh-cCCCCCCCEEEECCCCcCCCcCHH--------------HHHHHHhh------
Confidence 89999999954 2467777733 43 346899999999999887532 34554432
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
..++.++||||..
T Consensus 69 ~~~~~v~GNHE~~ 81 (218)
T PRK09968 69 PWFISVKGNHEAM 81 (218)
T ss_pred CCcEEEECchHHH
Confidence 2467899999974
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00037 Score=71.77 Aligned_cols=70 Identities=26% Similarity=0.343 Sum_probs=45.6
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc---------cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSM---------ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQD 111 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~---------~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~ 111 (649)
+++..|||+|-.. +.|++++ +.+.- .+-|.++++||++|.+..+. ++++.
T Consensus 1 ~~~~vIGDIHG~~------~~L~~lL-~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~--------------~vl~~ 59 (245)
T PRK13625 1 MKYDIIGDIHGCY------QEFQALT-EKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL--------------RMIEI 59 (245)
T ss_pred CceEEEEECccCH------HHHHHHH-HHcCCCcccCcccCCCCCEEEEECcccCCCcChH--------------HHHHH
Confidence 4789999999543 3577777 33321 12479999999999887543 23333
Q ss_pred HHHhcCCCCceEEEecCCCCCC
Q 006340 112 VIKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 112 L~~~~~l~~~p~~~I~GNHD~~ 133 (649)
+.+. .....++.++||||..
T Consensus 60 ~~~~--~~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 60 VWEL--VEKKAAYYVPGNHCNK 79 (245)
T ss_pred HHHH--hhCCCEEEEeCccHHH
Confidence 3221 1123789999999963
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00045 Score=69.52 Aligned_cols=68 Identities=19% Similarity=0.333 Sum_probs=45.9
Q ss_pred EEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCceEE
Q 006340 45 QLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFY 124 (649)
Q Consensus 45 ~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~~ 124 (649)
+|||+|-. ...|.+++ +.+...++|.++++||++|.+.... +++..+...... ..+++
T Consensus 2 ~igDiHg~------~~~l~~~l-~~~~~~~~d~li~lGD~vdrg~~~~--------------~~l~~l~~~~~~-~~~~~ 59 (225)
T cd00144 2 VIGDIHGC------LDDLLRLL-EKIGFPPNDKLIFLGDYVDRGPDSV--------------EVIDLLLALKIL-PDNVI 59 (225)
T ss_pred EEeCCCCC------HHHHHHHH-HHhCCCCCCEEEEECCEeCCCCCcH--------------HHHHHHHHhcCC-CCcEE
Confidence 68999943 24677777 4444567899999999999886532 233333332111 24799
Q ss_pred EecCCCCCCC
Q 006340 125 DIRGNHDNFG 134 (649)
Q Consensus 125 ~I~GNHD~~~ 134 (649)
.++||||...
T Consensus 60 ~l~GNHe~~~ 69 (225)
T cd00144 60 LLRGNHEDML 69 (225)
T ss_pred EEccCchhhh
Confidence 9999999853
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.02 Score=68.02 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=46.4
Q ss_pred CeeEEEEEecCCCccCCCCCCCCCCCCC-HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhC
Q 006340 169 DEKHLFVGFDSTMSVGLRGPTNLFGHPA-DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKH 247 (649)
Q Consensus 169 ~g~~~fIglD~~~~pG~~~p~~~~G~l~-~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~ 247 (649)
+-++-|||+-+...+....+ +..|.+. .+.++-+++...+.+++ ..+.+|++.|--..........+.....+++-
T Consensus 199 gvKIGiIGlttp~~~~w~~~-~~~g~v~f~D~veaa~~~v~~Lr~~--GaDvIIaLsH~G~~~d~~~~~~ena~~~l~~v 275 (780)
T PRK09418 199 KVKIGVMGFVPPQVMNWDKA-NLEGKVKAKDIVETAKKMVPKMKAE--GADVIVALAHSGVDKSGYNVGMENASYYLTEV 275 (780)
T ss_pred CceEEEEEeccccccccccc-cccCCeEECCHHHHHHHHHHHHHhc--CCCEEEEEeccCcccccccccchhhhHHHhcC
Confidence 44788999844332211111 2223221 22334445555444422 34689999997665321111111111113443
Q ss_pred -CceEEEeCcccCCCC
Q 006340 248 -SLSAYLCGHLHTRFG 262 (649)
Q Consensus 248 -~v~l~L~GHtH~~~g 262 (649)
+++++++||+|....
T Consensus 276 ~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 276 PGVDAVLMGHSHTEVK 291 (780)
T ss_pred CCCCEEEECCCCCccc
Confidence 599999999998864
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.013 Score=62.60 Aligned_cols=48 Identities=23% Similarity=0.222 Sum_probs=31.5
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-----cCCcEEEEcCCCCCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSM-----ISPSLVLITGDLTDGKS 89 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-----~kPD~VIitGDLtd~~~ 89 (649)
++|+|.+|+|-.-.......++...+++ +++ .+..+++-.||.+....
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~-~r~~~~~~~~~~l~ldaGD~~qGs~ 53 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNA-LKDEAAAEYDNTLTLSSGDNFIPGP 53 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHH-HHHhhhccCCCeEEEecCccccCch
Confidence 4799999999654333344566666633 332 23458999999987653
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00077 Score=68.41 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=44.6
Q ss_pred EEEcCCCCCCCCCCcHHHHHHHHHHHHhcc--------CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHh
Q 006340 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMI--------SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKR 115 (649)
Q Consensus 44 v~ISDlHls~~~~~~~~~l~~~i~~~l~~~--------kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~ 115 (649)
..|||+|-.. +.|++++.. +... ..|.++++||++|.+..+. ++++.+.+.
T Consensus 2 ~vIGDIHG~~------~~L~~lL~~-i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~--------------~vl~~l~~l 60 (222)
T cd07413 2 DFIGDIHGHA------EKLVVLLHK-LGYQELSGVYRHPERQVVFLGDLIDRGPEIR--------------ELLEIVKSM 60 (222)
T ss_pred EEEEeccCCH------HHHHHHHHH-cCCCccccccCCCCCEEEEeCcccCCCCCHH--------------HHHHHHHHh
Confidence 5799999643 467777733 4211 3589999999999987643 344444332
Q ss_pred cCCCCceEEEecCCCCCC
Q 006340 116 SGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 116 ~~l~~~p~~~I~GNHD~~ 133 (649)
. ....++.++||||..
T Consensus 61 ~--~~~~~~~l~GNHE~~ 76 (222)
T cd07413 61 V--DAGHALAVMGNHEFN 76 (222)
T ss_pred h--cCCCEEEEEccCcHH
Confidence 1 123688899999974
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.011 Score=70.60 Aligned_cols=204 Identities=14% Similarity=0.130 Sum_probs=96.4
Q ss_pred ceEEEEEcCCCCCCCC-------CC---cHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhh-hHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHH-------PD---RASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQN-EVEWMEYQN 107 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~-------~~---~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~-e~eW~~Y~~ 107 (649)
.++|++.+|+|-.-.. +. -..++..++++ +++..+ -+++-.||++.........+... ..+.+ -+-
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~-~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~-~~P 192 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEE-AKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGE-QHP 192 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHH-HHHhCCCEEEEecCCCCCCCcccchhhhccccccCc-chH
Confidence 4999999999975221 11 13355666633 444334 58899999998754211000000 00000 001
Q ss_pred HHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc-------ccc----CCCCccceEEE-Ee-----CC-
Q 006340 108 VMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN-------GQL----GRKQNVNSVTV-QI-----GD- 169 (649)
Q Consensus 108 vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~-------~~l----~~~~~~~~~~~-~~-----~~- 169 (649)
.++.++. +. .=...+||||... | .+++.+.... ... .....+.+|.+ +. ++
T Consensus 193 ~i~amN~---LG--yDA~tLGNHEFDy-----G-~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~ 261 (814)
T PRK11907 193 MYAALEA---LG--FDAGTLGNHEFNY-----G-LDYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGK 261 (814)
T ss_pred HHHHHhc---cC--CCEEEechhhccc-----C-HHHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCc
Confidence 3343333 21 2355899999642 1 1222221000 000 00111223433 22 33
Q ss_pred ---eeEEEEEecCCCccCCCCCCCCCCCCC-HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC---CCchhHHHH
Q 006340 170 ---EKHLFVGFDSTMSVGLRGPTNLFGHPA-DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS---SHSGRSLQD 242 (649)
Q Consensus 170 ---g~~~fIglD~~~~pG~~~p~~~~G~l~-~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~---~~~~~~l~~ 242 (649)
-++-|||+-+...+....+ +..|.+. .+..+.+++...+.+++ ..+.+|++.|.-...... .++. -.+
T Consensus 262 ~~~vKIGiIGlvtp~~~~w~~~-~l~g~v~f~D~veaa~~~v~~Lr~~--GaDvIIaLsH~G~~~d~~~~~~En~--~~~ 336 (814)
T PRK11907 262 KVTLNIGITGIVPPQILNWDKA-NLEGKVIVRDAVEAVRDIIPTMRAA--GADIVLVLSHSGIGDDQYEVGEENV--GYQ 336 (814)
T ss_pred ccceEEEEEEeCchhhhhcccc-cccCCeEECCHHHHHHHHHHHHHhc--CCCEEEEEeCCCcccccccccccch--hhH
Confidence 3688999844333221111 2223221 23344555555555422 346899999976543111 1111 122
Q ss_pred HHHhCCceEEEeCcccCCC
Q 006340 243 IFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 243 ll~~~~v~l~L~GHtH~~~ 261 (649)
+-+--++++++.||+|...
T Consensus 337 LA~v~GIDaIvgGHsH~~~ 355 (814)
T PRK11907 337 IASLSGVDAVVTGHSHAEF 355 (814)
T ss_pred HhcCCCCCEEEECCCCCcc
Confidence 2222369999999999875
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0011 Score=69.30 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=47.4
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
|....|||+|-.. +.|++++ +.++ ..+.|-++++||++|.+.... ++++.+.+ +.
T Consensus 1 m~~YvIGDIHGc~------daL~~LL-~~i~f~~~~D~l~~lGDlVdRGP~sl--------------evL~~l~~---l~ 56 (279)
T TIGR00668 1 MATYLIGDLHGCY------DELQALL-ERVEFDPGQDTLWLTGDLVARGPGSL--------------EVLRYVKS---LG 56 (279)
T ss_pred CcEEEEEcccCCH------HHHHHHH-HHhCcCCCCCEEEEeCCccCCCCCHH--------------HHHHHHHh---cC
Confidence 3567899999653 4688888 4443 335689999999999987643 34444443 21
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
..+..|.||||..
T Consensus 57 -~~~~~VlGNHD~~ 69 (279)
T TIGR00668 57 -DAVRLVLGNHDLH 69 (279)
T ss_pred -CCeEEEEChhHHH
Confidence 2466899999974
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.025 Score=58.71 Aligned_cols=176 Identities=13% Similarity=0.098 Sum_probs=93.4
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
|+++|+|+=-.+ .+ ..+.+.+.+..++.++|+++..||.+-.+..-. ....+.|... + .
T Consensus 1 ~ilfigdi~g~~---G~-~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~-------------~~~~~~L~~~-G---~ 59 (255)
T cd07382 1 KILFIGDIVGKP---GR-KAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT-------------PKIAKELLSA-G---V 59 (255)
T ss_pred CEEEEEeCCCHH---HH-HHHHHHHHHHHHHCCCCEEEECCccccCCCCCC-------------HHHHHHHHhc-C---C
Confidence 578999985432 22 356677755445678999999999987653211 0234444432 2 2
Q ss_pred eEEEecCCCCCCCCCCCCCchhhhcccc--c-ccccCCCCcc-ceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCH
Q 006340 122 IFYDIRGNHDNFGVPIVGGSFDFFSKHS--I-NGQLGRKQNV-NSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPAD 197 (649)
Q Consensus 122 p~~~I~GNHD~~~v~~~~~~~~~~~~ys--~-~~~l~~~~~~-~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~ 197 (649)
-++ ..|||+... +...+++.... . ...+...... +...++.++.++.++++-..... . .++
T Consensus 60 D~i-TlGNH~fD~----gel~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~--~-------~~~- 124 (255)
T cd07382 60 DVI-TMGNHTWDK----KEILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFM--P-------PLD- 124 (255)
T ss_pred CEE-EecccccCc----chHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCC--C-------cCC-
Confidence 344 559998653 11122222210 0 0011100011 13455677788999988422111 0 111
Q ss_pred HHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 198 QLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 198 ~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
.-.+.+++.+++.++ +.+.+|+..|--.. + ....+...+ .-++++++.||+|....
T Consensus 125 ~P~~~~~~~v~~lk~---~~D~IIV~~H~g~t----s-Ek~ala~~l-dg~VdvIvGtHTHv~t~ 180 (255)
T cd07382 125 NPFRAADELLEELKE---EADIIFVDFHAEAT----S-EKIALGWYL-DGRVSAVVGTHTHVQTA 180 (255)
T ss_pred CHHHHHHHHHHHHhc---CCCEEEEEECCCCC----H-HHHHHHHhC-CCCceEEEeCCCCccCC
Confidence 223456666665542 34589999996321 1 111233222 22499999999998863
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0027 Score=66.61 Aligned_cols=71 Identities=23% Similarity=0.252 Sum_probs=43.6
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-----cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSM-----ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRS 116 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-----~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~ 116 (649)
+++.|||+|-.. ..|++++...... ...+.+|++||++|.+.... ++++.+....
T Consensus 3 ~iyaIGDIHG~~------d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~--------------eVld~L~~l~ 62 (304)
T cd07421 3 VVICVGDIHGYI------SKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETR--------------KVIDFLISLP 62 (304)
T ss_pred eEEEEEeccCCH------HHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHH--------------HHHHHHHHhh
Confidence 688999999653 3566666332212 23578999999999987532 2233222211
Q ss_pred CC-CCceEEEecCCCCC
Q 006340 117 GL-EKSIFYDIRGNHDN 132 (649)
Q Consensus 117 ~l-~~~p~~~I~GNHD~ 132 (649)
.. +...++.++||||.
T Consensus 63 ~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 63 EKHPKQRHVFLCGNHDF 79 (304)
T ss_pred hcccccceEEEecCChH
Confidence 00 11257899999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.045 Score=57.10 Aligned_cols=178 Identities=13% Similarity=0.095 Sum_probs=96.2
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||+++++|+=-. +.+ ..+.+.+.+..++.++|+++.-||.+.++..-. . ...++|.+. +
T Consensus 1 m~ilfiGDi~G~---~Gr-~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~---~----------~~~~~L~~~-G--- 59 (266)
T TIGR00282 1 IKFLFIGDVYGK---AGR-KIVKNNLPQLKSKYQADLVIANGENTTHGKGLT---L----------KIYEFLKQS-G--- 59 (266)
T ss_pred CeEEEEEecCCH---HHH-HHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCC---H----------HHHHHHHhc-C---
Confidence 689999999632 222 346667755445678999999999997653211 0 244455442 2
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhcccc-ccc--ccC--CCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCC
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHS-ING--QLG--RKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHP 195 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys-~~~--~l~--~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l 195 (649)
.-+..+ |||....- ...++..+.. ..+ .+. ..+. +...++.++.++.++.+...... .| ..
T Consensus 60 vDviT~-GNH~~Dkg----e~~~~i~~~~~~lrpanyp~~~pG~-g~~i~~~nG~kiaVinl~G~~fm---~~-----~~ 125 (266)
T TIGR00282 60 VNYITM-GNHTWFQK----LILDVVINQKDLVRPLNFDTSFAGK-GSLVFEFNGAKIAVTNLQGTSVN---LP-----FK 125 (266)
T ss_pred CCEEEc-cchhccCc----HHHHHHhccccccccCCCCCCCCCC-CcEEEEECCEEEEEEECCCcccC---Cc-----cc
Confidence 355555 99987531 1111111110 000 000 1111 12445667778888776432211 01 10
Q ss_pred CHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 196 ADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 196 ~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
.+.-.+.+++.+++.++ +.+.+|+..|--.. +.+.....+-+-+++++++-|+|....
T Consensus 126 ~~~Pf~~~d~~i~~lk~---~~d~IIVd~Haeat------sEK~a~~~~ldg~vsaVvGtHtHV~Ta 183 (266)
T TIGR00282 126 TTNPFKVLKELINMLKK---DCDLIFVDFHAETT------SEKNAFGMAFDGYVTAVVGTHTHVPTA 183 (266)
T ss_pred cCCHHHHHHHHHHhhhc---CCCEEEEEeCCCCH------HHHHHHHHHhCCCccEEEeCCCCCCCC
Confidence 12233445665655542 23589999995432 123445555566899999999998863
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >KOG0701 consensus dsRNA-specific nuclease Dicer and related ribonucleases [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.21 E-value=2.8e-05 Score=95.91 Aligned_cols=285 Identities=27% Similarity=0.330 Sum_probs=209.2
Q ss_pred eEEeecCCCCccccccccccccccccccccccccEEEEEEeCCCCeEEEEEEeCCcCCCchhhHHhhhccc--cCCCCCC
Q 006340 344 TIVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRALVFSVSPILSVVAKVYDSRSGKHDLVMEELMRKR--TDNSSRG 421 (649)
Q Consensus 344 p~iliT~P~~~~~~~~~~~~~~~~~~~~~~~~~~IrvlvFs~s~~~~V~v~id~~~~~~~~~~~e~~~~~~--~~~~~~~ 421 (649)
-.++-+.|..++.+....-+..++.+...+.-.+++++.++......+..++..+.-.--..+.+.+|++. ......+
T Consensus 13 ~~~l~~~~~e~~~~~~s~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (1606)
T KOG0701|consen 13 LKVLEVFPLESRGLSTSKRHKQECTHHHVSILTAIGALNLLFGGYLLLSDRVLLVFDECHNLVMDAHPRRHFMDLSSSGP 92 (1606)
T ss_pred cccccccccccccccchhhhhhhhhhcccchhhhhhhhhhhcCchhhhhhhhhhccccccccccccCcchhhhhcccccC
Confidence 34455666666665553211112212211222367777777776666655554433333334555566542 1223344
Q ss_pred CeeeeccCCCCCCCCCCCceEEEEEEEeCCCCceeeeeeeEEEcCcccccccccceeeeeecccchhhhhHHHHHHHHHH
Q 006340 422 DLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLF 501 (649)
Q Consensus 422 ~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (649)
. ...||+-.....+...+.+.+-...|-.+++...+.++++..+.+....|++-++.+|.++|.--+.++.| ..--++
T Consensus 93 ~-~s~pr~~~~~a~~~~~~~~~~~~~~~~k~~e~~~~~~~~t~~~~v~~~~~t~~~~~vm~~~~~~~~~~~~~-~~~~~~ 170 (1606)
T KOG0701|consen 93 S-FSVPRILGLTASLLNDKFWLEELDEDLKKLEYLSESRIETASDLVSLVRYTSNPFEVMVCCLDAEYGPLLI-NKDKLI 170 (1606)
T ss_pred C-CCcchhhhccCCCcCCCcchhhhhHHHHHHHHHHHhChhhhccceEeeeccCCCeEEeeehhhhhhhhhhc-ccccee
Confidence 5 89999888888888889999999999999999999999999999888999999999999999999999988 555557
Q ss_pred HHHHHHHHHHHhhhhccccccccccCCcchhhhhheeeccccCchhhHHHHHHHHHhhccceeeEEeeCCcceEEEEEEE
Q 006340 502 SILIVPKALLILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVVWYGILGYLFYLVLFPWFVGQVFTDGESWGYMTYMG 581 (649)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~pw~~g~~~~~~~~~~~~~~~g 581 (649)
.++++|...++-++.++........++..-+.-|..+-.+.+..+|.+=-.+..| -+|.+.+++-.-.|+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-------~~e~f~~~~~~~~~~~~- 242 (1606)
T KOG0701|consen 171 CVFLIPDCIVITFQKQYTLLKVLFKKGPWCSVKWIAQDVRELPKVIAGNPAELHY-------CEEVFSDSELRFLMSIP- 242 (1606)
T ss_pred EEeccCcceeeeccccchhhhhhcccCcchhhHHHHHHHhhcceeecCCHHHhhh-------hhhhcCcHHHHHHHhHH-
Confidence 7779999999988887766655556666667788999999999999998888888 89999998888888887
Q ss_pred EEEeecCCCCCceeecCCcEEEEEcceeeeehhHHHHHHHHHHhhhhhhh---hhccCCCCCchh
Q 006340 582 WVVRALDNQESHKYIGSPDVMVIVLPHIVFVVLPAILVSAALAAEKELYR---VSLSGKKEDDHE 643 (649)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 643 (649)
.+....-.-++++++.+|+|....|+-++.+++ .+..-+.+|+ ++ ...+|+...|+.
T Consensus 243 -~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~l~~--~~~~~~v~k~--~l~~~~~l~~i~~~~~~ 302 (1606)
T KOG0701|consen 243 -RLLERLRDSKHEYIHQFEVLRKYEPHDVFRLIH--ESVCPLVDKE--YLEKIETLSGIIFVDQR 302 (1606)
T ss_pred -HHHHHhhhcchhhhcccceeeeecccccceeeh--hhcCchhhHH--HHHhhhhhhheeecccc
Confidence 444566667888999999999999999999999 4445555555 44 556777766643
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.021 Score=59.23 Aligned_cols=151 Identities=13% Similarity=0.069 Sum_probs=76.2
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-----------cCCcEEEEcCCCCCCCCcchh-hh----------hhhh
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSM-----------ISPSLVLITGDLTDGKSKDLL-TM----------KQNE 99 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-----------~kPD~VIitGDLtd~~~~~~~-~s----------~Q~e 99 (649)
+++.+||+|++... .....++.++ +.+.. .+...+|+.||.++....... .. ....
T Consensus 1 ~i~~vSgL~ig~~~-~~~~~l~ll~-d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (257)
T cd07387 1 YIALVSGLGLGGNA-ESSLSLQLLV-DWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASV 78 (257)
T ss_pred CEEEEcccccCCCc-cchHHHHHHH-HHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhH
Confidence 47899999999763 2223455554 44432 234579999999986542111 00 0012
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCC--CCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEe
Q 006340 100 VEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVP--IVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGF 177 (649)
Q Consensus 100 ~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~--~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIgl 177 (649)
+..+...+.+.++. ..+|+..+|||||.-+.. .-.-....|.+-.... ......|++.++.++ +.|++.
T Consensus 79 ~~~~~ld~~l~~l~-----~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~--~~~~vtNP~~~~i~g--~~vLgt 149 (257)
T cd07387 79 EAVKELDNFLSQLA-----SSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYS--TLNLVTNPYEFSIDG--VRVLGT 149 (257)
T ss_pred HHHHHHHHHHHhhh-----cCCeEEECCCCCCcccccCCCCCCCHHHhhcccccC--CcEEeCCCeEEEECC--EEEEEE
Confidence 22334445555553 346999999999986531 1101112221100000 122233466677654 566655
Q ss_pred cCCCccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 006340 178 DSTMSVGLRGPTNLFGHPADQLLTEIDSELS 208 (649)
Q Consensus 178 D~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~ 208 (649)
......... .+ ...++.++.|++.|+
T Consensus 150 sGqni~Di~---ky--~~~~~~l~~me~~L~ 175 (257)
T cd07387 150 SGQNVDDIL---KY--SSLESRLDILERTLK 175 (257)
T ss_pred CCCCHHHHH---Hh--CCCCCHHHHHHHHHH
Confidence 333211100 01 112455778888776
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.014 Score=61.23 Aligned_cols=72 Identities=17% Similarity=0.136 Sum_probs=46.4
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
+++.++|+|-.- .++.+++ +.......+-+++.||++|.+....+. . ..+..+.- ....
T Consensus 29 ~i~vvGDiHG~~------~~l~~ll-~~~~~~~~~~~vfLGD~VDrG~~s~e~----------l-~~l~~lk~---~~p~ 87 (271)
T smart00156 29 PVTVCGDIHGQF------DDLLRLF-DLNGPPPDTNYVFLGDYVDRGPFSIEV----------I-LLLFALKI---LYPN 87 (271)
T ss_pred CEEEEEeCcCCH------HHHHHHH-HHcCCCCCceEEEeCCccCCCCChHHH----------H-HHHHHHHh---cCCC
Confidence 588999999653 4667776 333344568899999999988754311 1 11222221 1123
Q ss_pred eEEEecCCCCCCC
Q 006340 122 IFYDIRGNHDNFG 134 (649)
Q Consensus 122 p~~~I~GNHD~~~ 134 (649)
.++.++||||...
T Consensus 88 ~v~llrGNHE~~~ 100 (271)
T smart00156 88 RVVLLRGNHESRS 100 (271)
T ss_pred CEEEEeccccHHH
Confidence 6899999999853
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.01 Score=59.31 Aligned_cols=89 Identities=10% Similarity=0.088 Sum_probs=51.3
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhh---hhhhHHHHHHHHHHHHHHHhcCC
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTM---KQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s---~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
|+.+||+|++... ...+.|++++ +.++ ..+|+.+|++|+.++......... .....+....+.+.+.+.+. .
T Consensus 1 Iv~~Sg~~~~~~~-~~~~~L~~~l-~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~ 76 (209)
T PF04042_consen 1 IVFASGPFLDSDN-LSLEPLRDLL-SGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESI--L 76 (209)
T ss_dssp EEEEES--CTTT--HHHHHHHHHH-HCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCC--H
T ss_pred CEEEecCccCCCH-hHHHHHHHHH-HhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhc--c
Confidence 6899999998532 2245677777 4455 778999999999999765422111 01222333344444444332 2
Q ss_pred CCceEEEecCCCCCCCC
Q 006340 119 EKSIFYDIRGNHDNFGV 135 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~~v 135 (649)
+.+++..|||+||....
T Consensus 77 ~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 77 PSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CCSEEEEE--TTCTT-S
T ss_pred cccEEEEeCCCcccccc
Confidence 46799999999998754
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.023 Score=60.52 Aligned_cols=71 Identities=17% Similarity=0.131 Sum_probs=45.1
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
++..++|+|-.- .++.+++ +.......+-.+++||++|.+....+ ++..+.........
T Consensus 44 ~i~ViGDIHG~~------~dL~~l~-~~~g~~~~~~ylFLGDyVDRG~~s~E--------------vi~lL~~lki~~p~ 102 (305)
T cd07416 44 PVTVCGDIHGQF------YDLLKLF-EVGGSPANTRYLFLGDYVDRGYFSIE--------------CVLYLWALKILYPK 102 (305)
T ss_pred CEEEEEeCCCCH------HHHHHHH-HhcCCCCCceEEEECCccCCCCChHH--------------HHHHHHHHHhhcCC
Confidence 478899999643 3566666 33333345889999999999876432 22222211111123
Q ss_pred eEEEecCCCCCC
Q 006340 122 IFYDIRGNHDNF 133 (649)
Q Consensus 122 p~~~I~GNHD~~ 133 (649)
.++.++||||..
T Consensus 103 ~v~lLRGNHE~~ 114 (305)
T cd07416 103 TLFLLRGNHECR 114 (305)
T ss_pred CEEEEeCCCcHH
Confidence 689999999985
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.02 Score=61.30 Aligned_cols=73 Identities=16% Similarity=0.128 Sum_probs=45.7
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhcc-CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMI-SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~-kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
+++.++|+|-.- .+|.++++. .... ..+..+++||++|.+....+ ++.-+........
T Consensus 52 ~~~vvGDiHG~~------~dL~~il~~-~g~~~~~~~~lFLGDyVDRG~~s~E--------------vl~ll~~lk~~~p 110 (321)
T cd07420 52 QVTICGDLHGKL------DDLFLIFYK-NGLPSPENPYVFNGDFVDRGKRSIE--------------ILIILFAFFLVYP 110 (321)
T ss_pred CeEEEEeCCCCH------HHHHHHHHH-cCCCCccceEEEeccccCCCCCcHH--------------HHHHHHHHhhcCC
Confidence 679999999653 467777732 2111 22679999999999876432 2222222111122
Q ss_pred ceEEEecCCCCCCCC
Q 006340 121 SIFYDIRGNHDNFGV 135 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v 135 (649)
..++.++|||+...+
T Consensus 111 ~~v~llRGNHE~~~~ 125 (321)
T cd07420 111 NEVHLNRGNHEDHIM 125 (321)
T ss_pred CcEEEecCchhhhhh
Confidence 368999999998643
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.22 Score=50.83 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=57.4
Q ss_pred eEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCC-chhHH
Q 006340 162 SVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSH-SGRSL 240 (649)
Q Consensus 162 ~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~-~~~~l 240 (649)
...++.++.++.|+++-....+....+....+.......+.+++.++++++ +...+|++.|--......+. ...++
T Consensus 123 ~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~---~~D~vIv~~H~G~e~~~~p~~~~~~l 199 (239)
T cd07381 123 PAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAKK---KADIVIVSLHWGVEYSYYPTPEQREL 199 (239)
T ss_pred cEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHhh---cCCEEEEEecCcccCCCCCCHHHHHH
Confidence 355677888999999965544322222111221222334455566665542 24689999997544322221 12345
Q ss_pred HHHHHhCCceEEEeCcccCCCC
Q 006340 241 QDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 241 ~~ll~~~~v~l~L~GHtH~~~g 262 (649)
.+.+...++++++.||.|..++
T Consensus 200 a~~l~~~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 200 ARALIDAGADLVIGHHPHVLQG 221 (239)
T ss_pred HHHHHHCCCCEEEcCCCCcCCC
Confidence 5445556899999999998874
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.031 Score=58.96 Aligned_cols=72 Identities=17% Similarity=0.110 Sum_probs=44.8
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
.+..++|+|-.- .++.+++ +.......+-.+++||++|.+....+. + ..+..+.- ....
T Consensus 43 ~i~vvGDIHG~~------~dL~~ll-~~~~~~~~~~~lfLGDyVDRG~~s~ev----------l-~ll~~lk~---~~p~ 101 (285)
T cd07415 43 PVTVCGDIHGQF------YDLLELF-RVGGDPPDTNYLFLGDYVDRGYYSVET----------F-LLLLALKV---RYPD 101 (285)
T ss_pred CEEEEEeCCCCH------HHHHHHH-HHcCCCCCCeEEEEeEECCCCcCHHHH----------H-HHHHHHhh---cCCC
Confidence 378899999643 3566666 323233456889999999988754311 1 11222221 1224
Q ss_pred eEEEecCCCCCCC
Q 006340 122 IFYDIRGNHDNFG 134 (649)
Q Consensus 122 p~~~I~GNHD~~~ 134 (649)
.++.++||||...
T Consensus 102 ~v~llrGNHE~~~ 114 (285)
T cd07415 102 RITLLRGNHESRQ 114 (285)
T ss_pred cEEEEecccchHh
Confidence 7999999999854
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PF03404 Mo-co_dimer: Mo-co oxidoreductase dimerisation domain; InterPro: IPR005066 The majority of molybdenum-containing enzymes utilise a molybdenum cofactor (MoCF or Moco) consisting of a Mo atom coordinated via a cis-dithiolene moiety to molybdopterin (MPT) | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.011 Score=55.04 Aligned_cols=76 Identities=17% Similarity=0.115 Sum_probs=49.9
Q ss_pred cEEEEEEeCCC--CeEEEEEEeCCc-CCCchhhHHhhhccccCC-CCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCC
Q 006340 377 TIRALVFSVSP--ILSVVAKVYDSR-SGKHDLVMEELMRKRTDN-SSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMG 452 (649)
Q Consensus 377 ~IrvlvFs~s~--~~~V~v~id~~~-~~~~~~~~e~~~~~~~~~-~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G 452 (649)
.|+=.+|++.. |.+|+|++||+. |.++++....++.+. ++ .-+=.+|...|++.. ..|.+ .|.|+|+|..|
T Consensus 30 ~i~G~A~~g~g~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~-g~~~~aW~~W~~~~~~~~-~~G~~---~i~~RA~D~~G 104 (131)
T PF03404_consen 30 TIRGYAWSGGGRGIARVEVSTDGGKTWQEATLDGPESPPRY-GEARWAWRLWEYDWPPPS-LPGEY---TIMVRATDESG 104 (131)
T ss_dssp EEEEEEE-STT--EEEEEEESSTTSSEEE-EEESTSCCCHH-TS-TTS-EEEEEEEEECS-HCCEE---EEEEEEEETTS
T ss_pred EEEEEEEeCCCcceEEEEEEeCCCCCcEEeEeccCCCcccc-cccCcccceeeeccCcCc-cccce---EEEEEEeeccc
Confidence 68889997776 999999999877 987755444332211 11 233468999995544 34666 79999999999
Q ss_pred Cceee
Q 006340 453 RLSSS 457 (649)
Q Consensus 453 ~~~~~ 457 (649)
.+.-.
T Consensus 105 ~~QP~ 109 (131)
T PF03404_consen 105 NVQPE 109 (131)
T ss_dssp -B--S
T ss_pred ccCCC
Confidence 98744
|
MoCF is ubiquitous in nature, and the pathway for MoCF biosynthesis is conserved in all three domains of life. MoCF-containing enzymes function as oxidoreductases in carbon, nitrogen, and sulphur metabolism [, ]. In Escherichia coli, biosynthesis of MoCF is a three stage process. It begins with the MoaA and MoaC conversion of GTP to the meta-stable pterin intermediate precursor Z. The second stage involves MPT synthase (MoaD and MoaE), which converts precursor Z to MPT; MoeB is involved in the recycling of MPT synthase. The final step in MoCF synthesis is the attachment of mononuclear Mo to MPT, a process that requires MoeA and which is enhanced by MogA in an Mg2 ATP-dependent manner []. MoCF is the active co-factor in eukaryotic and some prokaryotic molybdo-enzymes, but the majority of bacterial enzymes requiring MoCF, need a modification of MTP for it to be active; MobA is involved in the attachment of a nucleotide monophosphate to MPT resulting in the MGD co-factor, the active co-factor for most prokaryotic molybdo-enzymes. Bacterial two-hybrid studies have revealed the close interactions between MoeA, MogA, and MobA in the synthesis of MoCF []. Moreover the close functional association of MoeA and MogA in the synthesis of MoCF is supported by fact that the known eukaryotic homologues to MoeA and MogA exist as fusion proteins: CNX1 (Q39054 from SWISSPROT) of Arabidopsis thaliana (Mouse-ear cress), mammalian Gephryin (e.g. Q9NQX3 from SWISSPROT) and Drosophila melanogaster (Fruit fly) Cinnamon (P39205 from SWISSPROT) []. This domain is found in molybdopterin cofactor oxidoreductases, such as in the C-terminal of Mo-containing sulphite oxidase, which catalyses the conversion of sulphite to sulphate, the terminal step in the oxidative degradation of cysteine and methionine []. This domain is involved in dimer formation, and has an Ig-fold structure [].; GO: 0016491 oxidoreductase activity, 0030151 molybdenum ion binding, 0055114 oxidation-reduction process; PDB: 2C9X_A 2CA3_A 2BLF_A 2CA4_A 2BPB_A 2XTS_C 2BII_A 2BIH_A 1OGP_A 2A9A_B .... |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.037 Score=58.61 Aligned_cols=72 Identities=22% Similarity=0.180 Sum_probs=44.8
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
.+..++|+|-.- .++.+++ +.......+-.++.||++|.+....+. . ..+..++- ....
T Consensus 51 ~i~viGDIHG~~------~~L~~l~-~~~~~~~~~~~lfLGDyVDRG~~s~e~----------i-~ll~~lk~---~~p~ 109 (293)
T cd07414 51 PLKICGDIHGQY------YDLLRLF-EYGGFPPESNYLFLGDYVDRGKQSLET----------I-CLLLAYKI---KYPE 109 (293)
T ss_pred ceEEEEecCCCH------HHHHHHH-HhcCCCCcceEEEEeeEecCCCCcHHH----------H-HHHHHhhh---hCCC
Confidence 478899999543 3566666 333334457789999999988754321 1 11222211 1123
Q ss_pred eEEEecCCCCCCC
Q 006340 122 IFYDIRGNHDNFG 134 (649)
Q Consensus 122 p~~~I~GNHD~~~ 134 (649)
.++.++||||...
T Consensus 110 ~i~llrGNHE~~~ 122 (293)
T cd07414 110 NFFLLRGNHECAS 122 (293)
T ss_pred cEEEEecccchhh
Confidence 5899999999864
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.047 Score=59.59 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=44.4
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
+++.++|+|-.. .+|.+++. ....... +..+++||++|.+..... ++..+........
T Consensus 67 ~i~VvGDIHG~~------~dL~~ll~-~~g~~~~~~~ylFLGDyVDRGp~SlE--------------vl~lL~~lki~~p 125 (377)
T cd07418 67 EVVVVGDVHGQL------HDVLFLLE-DAGFPDQNRFYVFNGDYVDRGAWGLE--------------TFLLLLSWKVLLP 125 (377)
T ss_pred CEEEEEecCCCH------HHHHHHHH-HhCCCCCCceEEEeccccCCCCChHH--------------HHHHHHHHhhccC
Confidence 689999999653 35677763 2222222 458999999998875432 2222221111112
Q ss_pred ceEEEecCCCCCCC
Q 006340 121 SIFYDIRGNHDNFG 134 (649)
Q Consensus 121 ~p~~~I~GNHD~~~ 134 (649)
..++.++||||...
T Consensus 126 ~~v~lLRGNHE~~~ 139 (377)
T cd07418 126 DRVYLLRGNHESKF 139 (377)
T ss_pred CeEEEEeeeccccc
Confidence 36899999999854
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.041 Score=58.28 Aligned_cols=71 Identities=21% Similarity=0.190 Sum_probs=43.4
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
+..++|+|-.- .++.+++ +.+.....+-.++.||++|.+.... +++..+..........
T Consensus 54 ~~ViGDIHG~~------~~L~~l~-~~~~~~~~~~~lfLGDyVDRG~~s~--------------evl~ll~~lk~~~p~~ 112 (294)
T PTZ00244 54 VRVCGDTHGQY------YDLLRIF-EKCGFPPYSNYLFLGDYVDRGKHSV--------------ETITLQFCYKIVYPEN 112 (294)
T ss_pred ceeeccCCCCH------HHHHHHH-HHcCCCCcccEEEeeeEecCCCCHH--------------HHHHHHHHHhhccCCe
Confidence 67899999543 3566666 3232223356778999999987543 1222221111112247
Q ss_pred EEEecCCCCCCC
Q 006340 123 FYDIRGNHDNFG 134 (649)
Q Consensus 123 ~~~I~GNHD~~~ 134 (649)
++.++||||...
T Consensus 113 v~llrGNHE~~~ 124 (294)
T PTZ00244 113 FFLLRGNHECAS 124 (294)
T ss_pred EEEEecccchHh
Confidence 999999999753
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.058 Score=57.34 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=44.4
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
+..++|+|-.- .++.+++ +.......+-.++.||++|.+....+ ++..+..........
T Consensus 45 i~vvGDIHG~~------~~L~~l~-~~~~~~~~~~~lfLGDyVDRG~~s~e--------------vl~ll~~lk~~~p~~ 103 (303)
T PTZ00239 45 VNVCGDIHGQF------YDLQALF-KEGGDIPNANYIFIGDFVDRGYNSVE--------------TMEYLLCLKVKYPGN 103 (303)
T ss_pred EEEEEeCCCCH------HHHHHHH-HhcCCCCCceEEEeeeEcCCCCCHHH--------------HHHHHHHhhhcCCCc
Confidence 78899999643 3566666 32333445779999999999875431 222222111111236
Q ss_pred EEEecCCCCCCC
Q 006340 123 FYDIRGNHDNFG 134 (649)
Q Consensus 123 ~~~I~GNHD~~~ 134 (649)
++.++||||...
T Consensus 104 v~llrGNHE~~~ 115 (303)
T PTZ00239 104 ITLLRGNHESRQ 115 (303)
T ss_pred EEEEecccchHH
Confidence 899999999854
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.068 Score=57.19 Aligned_cols=72 Identities=21% Similarity=0.147 Sum_probs=44.4
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
.++.++|+|-.- .++.+++ +.......+-.++.||++|.+....+ ++..+.........
T Consensus 60 ~i~vvGDIHG~~------~dL~~l~-~~~g~~~~~~ylfLGDyVDRG~~s~e--------------vl~ll~~lki~~p~ 118 (320)
T PTZ00480 60 PLKICGDVHGQY------FDLLRLF-EYGGYPPESNYLFLGDYVDRGKQSLE--------------TICLLLAYKIKYPE 118 (320)
T ss_pred CeEEEeecccCH------HHHHHHH-HhcCCCCcceEEEeceecCCCCCcHH--------------HHHHHHHhcccCCC
Confidence 488899999542 3566666 32323345678899999998875431 22222211111123
Q ss_pred eEEEecCCCCCCC
Q 006340 122 IFYDIRGNHDNFG 134 (649)
Q Consensus 122 p~~~I~GNHD~~~ 134 (649)
.++.++||||...
T Consensus 119 ~v~llRGNHE~~~ 131 (320)
T PTZ00480 119 NFFLLRGNHECAS 131 (320)
T ss_pred ceEEEecccchhh
Confidence 6899999999854
|
|
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.23 Score=52.14 Aligned_cols=103 Identities=14% Similarity=0.087 Sum_probs=65.4
Q ss_pred ceEEEEeCCCCCCceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc----cCCcEEEEcCCCCCCCCc-chhhhhhhhHH
Q 006340 27 GRRVIQLREGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSM----ISPSLVLITGDLTDGKSK-DLLTMKQNEVE 101 (649)
Q Consensus 27 ~~~~~~~~~~p~~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~----~kPD~VIitGDLtd~~~~-~~~~s~Q~e~e 101 (649)
.|+++-+++.+. ..+|+.+||+|+.. +...+.|+++++..-+. ..|-.+|+.|+.+..... .......+.+.
T Consensus 15 ~~~~~~~~~~~~-~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~ 91 (291)
T PTZ00235 15 EEYEIIVRKNDK-RHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKG 91 (291)
T ss_pred ceEEEEEecCCC-ceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHH
Confidence 568888887765 57888889999987 55566788887443232 248999999999865411 01112223344
Q ss_pred HHHHHH-HHHHHHHhcCCCCceEEEecCCCCCCC
Q 006340 102 WMEYQN-VMQDVIKRSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 102 W~~Y~~-vl~~L~~~~~l~~~p~~~I~GNHD~~~ 134 (649)
++.+.. ++.+.... ++...+..|||-.|.+.
T Consensus 92 Fd~La~llls~fp~L--~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 92 FEKLSVMLISKFKLI--LEHCYLIFIPGINDPCA 123 (291)
T ss_pred HHHHHHHHHHhChHH--HhcCeEEEECCCCCCCc
Confidence 444443 23332222 34578999999999854
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.073 Score=56.95 Aligned_cols=72 Identities=22% Similarity=0.150 Sum_probs=43.8
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhcc-CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMI-SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~-kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
-++.+++|+|-.- .++.+++ +...-. .-|-.+++||++|.+....+ ++..+.......
T Consensus 60 ~~~~VvGDIHG~~------~dL~~ll-~~~g~~~~~~~ylFLGDyVDRG~~S~E--------------vl~ll~~lki~~ 118 (316)
T cd07417 60 EKITVCGDTHGQF------YDLLNIF-ELNGLPSETNPYLFNGDFVDRGSFSVE--------------VILTLFAFKLLY 118 (316)
T ss_pred ceeEEeecccCCH------HHHHHHH-HhcCCCCccCeEEEEeeEecCCCChHH--------------HHHHHHHhhhcc
Confidence 4788999999643 3566666 222211 22579999999999876432 222222211111
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
...++.++||||..
T Consensus 119 p~~v~lLRGNHE~~ 132 (316)
T cd07417 119 PNHFHLNRGNHETD 132 (316)
T ss_pred CCceEEEeeccchH
Confidence 23688999999974
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.1 Score=55.86 Aligned_cols=69 Identities=22% Similarity=0.204 Sum_probs=41.5
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCC---------cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISP---------SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kP---------D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
+..++|+|-.- .+|.+++ +.+. ..+ .-+++.||++|.+....+ ++..+.
T Consensus 50 ~~viGDIHG~~------~~L~~ll-~~~g-~~~~~~~~~~~~~~~vfLGDyVDRGp~s~e--------------vl~ll~ 107 (311)
T cd07419 50 IKIFGDIHGQF------GDLMRLF-DEYG-SPVTEAAGDIEYIDYLFLGDYVDRGSNSLE--------------TICLLL 107 (311)
T ss_pred EEEEEeccCCH------HHHHHHH-HHcC-CCcccccCCCcCceEEEECCccCCCCChHH--------------HHHHHH
Confidence 67789999543 3566666 2221 111 247899999999875432 222222
Q ss_pred HhcCCCCceEEEecCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~ 133 (649)
.........++.++||||..
T Consensus 108 ~lk~~~p~~v~lLRGNHE~~ 127 (311)
T cd07419 108 ALKVKYPNQIHLIRGNHEDR 127 (311)
T ss_pred HhhhcCCCcEEEeccccchH
Confidence 21112224789999999974
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.58 Score=53.18 Aligned_cols=55 Identities=24% Similarity=0.181 Sum_probs=33.8
Q ss_pred HHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHH-HHHHhCC-ceE-EEeCcccCCC
Q 006340 199 LLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQ-DIFLKHS-LSA-YLCGHLHTRF 261 (649)
Q Consensus 199 qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~-~ll~~~~-v~l-~L~GHtH~~~ 261 (649)
|.+|-.+.++.- .-+.+|+++|.|.... . .++.+. ++...++ +.. |+-||.|...
T Consensus 213 ~~~~~~~m~~~~-----~idlii~lgH~~~~~~--~-e~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 213 QSEWEQDMVNTT-----DIDLIIALGHSPVRDD--D-EWKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred ccchHHHHhhcc-----CccEEEEecccccccc--h-hhhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 566766666642 2358999999997631 1 122233 3333344 555 9999999775
|
|
| >cd02114 bact_SorA_Moco sulfite:cytochrome c oxidoreductase subunit A (SorA), molybdopterin binding domain | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.24 Score=54.07 Aligned_cols=68 Identities=12% Similarity=0.017 Sum_probs=47.7
Q ss_pred cEEEEEEeCC-CCeEEEEEEeCC-cCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCc
Q 006340 377 TIRALVFSVS-PILSVVAKVYDS-RSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRL 454 (649)
Q Consensus 377 ~IrvlvFs~s-~~~~V~v~id~~-~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~ 454 (649)
.|+=.+|++. +|.+|+|++||+ .|..+++.... ..-+=.+|...|.+. ..|.+ +|.|+|+|..|++
T Consensus 278 ~i~G~A~~G~~~I~rVEVS~DgG~tW~~A~l~~~~-------~~~aW~~W~~~~~~~--~~G~~---~l~~RA~D~~G~~ 345 (367)
T cd02114 278 ALRGIAFDGGSGIRRVDVSADGGDSWTQATLGPDL-------GRFSFRGWKLTLDGV--KKGPL---TLMVRATNNDGQT 345 (367)
T ss_pred EEEEEEEcCCCCEEEEEEEeCCCCcceEeEeCCCC-------CCcEEEEEEEEEECC--CCCcE---EEEEEEEcCCCCC
Confidence 5888889755 699999999988 49876442100 001114788888543 35665 7999999999998
Q ss_pred ee
Q 006340 455 SS 456 (649)
Q Consensus 455 ~~ 456 (649)
.-
T Consensus 346 QP 347 (367)
T cd02114 346 QP 347 (367)
T ss_pred CC
Confidence 74
|
SorA is involved in oxidation of sulfur compounds during chemolithothrophic growth. Together with SorB, a small c-type heme containing subunit, it forms a hetrodimer. It is a member of the sulfite oxidase (SO) family of molybdopterin binding domains. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. |
| >cd02110 SO_family_Moco_dimer Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.13 Score=55.13 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=50.6
Q ss_pred cEEEEEEeCC-CCeEEEEEEeCC-cCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCc
Q 006340 377 TIRALVFSVS-PILSVVAKVYDS-RSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRL 454 (649)
Q Consensus 377 ~IrvlvFs~s-~~~~V~v~id~~-~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~ 454 (649)
.|+=-+|++. .|++|+|++||+ .|..+++.... ++.-+=.+|...|.+. .|.| +|.|+|+|..|++
T Consensus 226 ~i~G~A~~g~~~I~rVEvS~DgG~tW~~A~l~~~~------~~~~~W~~W~~~~~~~---~G~~---~l~vRA~D~~g~~ 293 (317)
T cd02110 226 EIGGVAWSGGRGIRRVEVSLDGGRTWQEARLEGPL------AGPRAWRQWELDWDLP---PGEY---ELVARATDSTGNV 293 (317)
T ss_pred EEEEEEEcCCCCEEEEEEEeCCCCcceEeEccCCc------CCCCEEEEEEEEEEcC---CCcE---EEEEEEECCCCCc
Confidence 6888899764 799999999998 69876542111 0112225899998554 6777 7999999999998
Q ss_pred eee
Q 006340 455 SSS 457 (649)
Q Consensus 455 ~~~ 457 (649)
...
T Consensus 294 QP~ 296 (317)
T cd02110 294 QPE 296 (317)
T ss_pred CCC
Confidence 754
|
This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.39 Score=45.80 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=30.3
Q ss_pred ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCceEEEecCCCC
Q 006340 72 MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHD 131 (649)
Q Consensus 72 ~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD 131 (649)
..+.|++|++||+......+ .+|..|.+=..+ . ..|.|.+-|||.
T Consensus 24 ~gpFd~~ic~Gdff~~~~~~--------~~~~~y~~g~~~------~-pipTyf~ggn~~ 68 (150)
T cd07380 24 KGPFDALLCVGDFFGDDEDD--------EELEAYKDGSKK------V-PIPTYFLGGNNP 68 (150)
T ss_pred cCCeeEEEEecCccCCccch--------hhHHHHhcCCcc------C-CCCEEEECCCCC
Confidence 34679999999998755432 245556432211 2 369999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd02112 eukary_NR_Moco molybdopterin binding domain of eukaryotic nitrate reductase (NR) | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.19 Score=55.31 Aligned_cols=76 Identities=8% Similarity=-0.048 Sum_probs=51.2
Q ss_pred cEEEEEEeCC--CCeEEEEEEeCCc-CCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCC
Q 006340 377 TIRALVFSVS--PILSVVAKVYDSR-SGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGR 453 (649)
Q Consensus 377 ~IrvlvFs~s--~~~~V~v~id~~~-~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~ 453 (649)
.|+=.+||+. .|++|+|++||+. |.++++....+++.. ++.-+=.+|.+.|.+.. ..|.+ +|.|+|+|..|+
T Consensus 289 ~i~G~A~sg~g~~I~rVeVS~DgG~tW~~A~L~~~~~~~~~-~~~~aW~~W~~~~~~~~-~~G~~---~l~~RA~D~~G~ 363 (386)
T cd02112 289 TMKGYAYAGGGRRVTRVEVSLDDGKSWKLASIDYPEDPTKY-GKCWCWCFWSLDVPLSE-LLAAK---EICVRAWDESMN 363 (386)
T ss_pred EEEEEEEcCCCCcEEEEEEEcCCCCCceeCCCCCCCCcccc-CCCCEeEEEEEeeeccc-CCCcE---EEEEEEEcCCCC
Confidence 5888999765 6999999999985 988766322221100 00011268888884322 24777 799999999999
Q ss_pred ceee
Q 006340 454 LSSS 457 (649)
Q Consensus 454 ~~~~ 457 (649)
+.-.
T Consensus 364 ~QP~ 367 (386)
T cd02112 364 TQPR 367 (386)
T ss_pred cCCC
Confidence 8743
|
Assimilatory NRs catalyze the reduction of nitrate to nitrite which is subsequently converted to NH4+ by nitrite reductase. Eukaryotic assimilatory nitrate reductases are cytosolic homodimeric enzymes with three prosthetic groups, flavin adenine dinucleotide (FAD), cytochrome b557, and Mo cofactor, which are located in three functional domains. Common features of all known members of the sulfite oxidase (SO) family of molybdopterin binding domains are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.38 E-value=1.3 Score=49.29 Aligned_cols=186 Identities=10% Similarity=0.026 Sum_probs=98.6
Q ss_pred HHHhccCCcEEEEcCCCCCCCCcchh---------------------hhhhhhHHHHHHHHHHHHHHHhcCCCCceEEEe
Q 006340 68 PALSMISPSLVLITGDLTDGKSKDLL---------------------TMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDI 126 (649)
Q Consensus 68 ~~l~~~kPD~VIitGDLtd~~~~~~~---------------------~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~~~I 126 (649)
+.+.+.+|||+|++||.+........ .-..+...|..|+ .=..|.... ...||++.
T Consensus 162 ~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~-~D~nLqaah--A~~Pwi~~ 238 (522)
T COG3540 162 KTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYK-TDENLQAAH--AAFPWIVQ 238 (522)
T ss_pred HHHHhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhc-ccHHHHHhh--ccCCEEEE
Confidence 44556789999999998754321100 0012223333333 111222211 23599999
Q ss_pred cCCCCCCCCCCCCCch-hh-h-------------cccccccccCCCCcc--ceEEEEeCCeeE-EEEEecCCCcc-----
Q 006340 127 RGNHDNFGVPIVGGSF-DF-F-------------SKHSINGQLGRKQNV--NSVTVQIGDEKH-LFVGFDSTMSV----- 183 (649)
Q Consensus 127 ~GNHD~~~v~~~~~~~-~~-~-------------~~ys~~~~l~~~~~~--~~~~~~~~~g~~-~fIglD~~~~p----- 183 (649)
=-.|+..|-++.+... +- + +-|-+.-.+...... ....-.+.+|++ .|..||.-.+.
T Consensus 239 WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~ 318 (522)
T COG3540 239 WDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPC 318 (522)
T ss_pred eccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhcccccc
Confidence 9999987655432222 11 1 111110000000000 012223344553 46667766555
Q ss_pred -CCCCCCC------CCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCcc-------------------CCCCch
Q 006340 184 -GLRGPTN------LFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFS-------------------ASSHSG 237 (649)
Q Consensus 184 -G~~~p~~------~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~-------------------~~~~~~ 237 (649)
++..|.- --..+.++|.+||++.|.+. +..+.|+-.-.|+... .++..+
T Consensus 319 ~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S-----katWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~R 393 (522)
T COG3540 319 GDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS-----KATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGR 393 (522)
T ss_pred CCCCcchhhhhhCccccchhhHHHHHHHhhhhhc-----chhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccH
Confidence 4433311 11256789999999999864 3457777666665410 112245
Q ss_pred hHHHHHHHhCCc--eEEEeCcccCCC
Q 006340 238 RSLQDIFLKHSL--SAYLCGHLHTRF 261 (649)
Q Consensus 238 ~~l~~ll~~~~v--~l~L~GHtH~~~ 261 (649)
++|.+.++..++ .++|+|-.|..-
T Consensus 394 erLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 394 ERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred HHHHHHHHhcCCCCcEEEechhHHHH
Confidence 789999988774 599999999663
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=91.25 E-value=1.4 Score=45.05 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=54.6
Q ss_pred EEEEeCCeeEEEEEecCCCccCCCCCCCCCC--CCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCC-chhH
Q 006340 163 VTVQIGDEKHLFVGFDSTMSVGLRGPTNLFG--HPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSH-SGRS 239 (649)
Q Consensus 163 ~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G--~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~-~~~~ 239 (649)
...+.++.++.|+++-....++...+.+..| .+.....+.+++.++++++ +...+|++.|--......+. ...+
T Consensus 120 ~i~~~~g~kIg~ig~t~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~---~~D~vIv~~H~G~e~~~~p~~~~~~ 196 (239)
T smart00854 120 AIVEVKGIKIALLAYTYGTNNGWAASKDRPGVALLPDLDREKILADIARARK---KADVVIVSLHWGVEYQYEPTDEQRE 196 (239)
T ss_pred EEEEECCEEEEEEEEEcCCCCCcccCCCCCCeeecCcCCHHHHHHHHHHHhc---cCCEEEEEecCccccCCCCCHHHHH
Confidence 4566788899999985443322211111222 1221123445555555542 34689999997654322221 1234
Q ss_pred HHHHHHhCCceEEEeCcccCCCC
Q 006340 240 LQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 240 l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
+..-+.+.++++++.||.|..++
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~ 219 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQP 219 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCc
Confidence 44444446899999999998874
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PLN00177 sulfite oxidase; Provisional | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.57 Score=51.67 Aligned_cols=74 Identities=12% Similarity=-0.025 Sum_probs=48.6
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCC-cCCCchhhHHhh-hc---cccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEe
Q 006340 377 TIRALVFSV--SPILSVVAKVYDS-RSGKHDLVMEEL-MR---KRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTD 449 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~-~~~~~~~~~e~~-~~---~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D 449 (649)
.|+=.+||+ ..|.+|+|++||+ .|..+++..+.. +. ......-+=-+|+..|. ..|.+ .|.++|+|
T Consensus 285 ~i~G~Awsggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~w~~~~~----~~g~~---~l~~RA~D 357 (393)
T PLN00177 285 TVAGYALSGGGRGIERVDISVDGGKTWVEASRYQKPGVPYISDDISSDKWAWVLFEATVD----VPQST---EIVAKAVD 357 (393)
T ss_pred EEEEEEECCCCccEEEEEEEcCCCCCceeeeeccccccccccccccCCccEEEEEEEEec----CCCCe---EEEEEEEc
Confidence 699999974 3699999999988 598876532210 00 00001111257777773 23555 79999999
Q ss_pred CCCCceee
Q 006340 450 IMGRLSSS 457 (649)
Q Consensus 450 ~~G~~~~~ 457 (649)
..|++.-.
T Consensus 358 ~~G~~QP~ 365 (393)
T PLN00177 358 SAANVQPE 365 (393)
T ss_pred CCCCCCCC
Confidence 99998743
|
|
| >cd02111 eukary_SO_Moco molybdopterin binding domain of sulfite oxidase (SO) | Back alignment and domain information |
|---|
Probab=89.10 E-value=0.73 Score=50.37 Aligned_cols=74 Identities=15% Similarity=0.087 Sum_probs=48.9
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCCc-CCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCC-CCCCceEEEEEEEeCCC
Q 006340 377 TIRALVFSV--SPILSVVAKVYDSR-SGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFED-SSPQRFWLEIEVTDIMG 452 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~~-~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~-g~h~~~~i~V~~~D~~G 452 (649)
.|+-.+||+ .+|.+|+|++||+. |..+++.....+.. .++.-+=..|.+.|.+ .. |.+ .|.|+|+|..|
T Consensus 265 ~i~G~A~sgg~~~I~rVEVS~DgG~tW~~A~l~~~~~~~~-~~~~~aW~~W~~~~~~---~~~g~~---~l~~RA~D~~G 337 (365)
T cd02111 265 TVKGYAWSGGGRKIVRVDVSLDGGRTWKVAELEQEENVWP-SGRKWAWTLWEATVPV---PAGKEA---EIIAKAVDSAY 337 (365)
T ss_pred EEEEEEECCCCCcEEEEEEECCCCCcceeCCcCCCCCccc-cCCCCEeEEEEEEEEe---CCCCeE---EEEEEEEcCCC
Confidence 699999974 48999999999885 98875522111100 0001112578888733 33 344 89999999999
Q ss_pred Cceee
Q 006340 453 RLSSS 457 (649)
Q Consensus 453 ~~~~~ 457 (649)
++.-.
T Consensus 338 ~~QP~ 342 (365)
T cd02111 338 NVQPE 342 (365)
T ss_pred CcCCC
Confidence 98753
|
SO catalyzes the terminal reaction in the oxidative degradation of the sulfur-containing amino acids cysteine and methionine. Common features of all known members of the sulfite oxidase (SO) family of molybdopterin binding domains are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.09 E-value=2.8 Score=42.17 Aligned_cols=60 Identities=23% Similarity=0.193 Sum_probs=34.5
Q ss_pred hccCCcEEEEcCCCCCCCCcchh-------------hhhhhhHHH-HHHHHH-----HHHHHHhcCCCCceEEEecCCCC
Q 006340 71 SMISPSLVLITGDLTDGKSKDLL-------------TMKQNEVEW-MEYQNV-----MQDVIKRSGLEKSIFYDIRGNHD 131 (649)
Q Consensus 71 ~~~kPD~VIitGDLtd~~~~~~~-------------~s~Q~e~eW-~~Y~~v-----l~~L~~~~~l~~~p~~~I~GNHD 131 (649)
.+.+||+++++||.+........ ......+++ +.|+.. ++++ ...+|++.+--+||
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~-----~~~~p~~~iwDDHD 100 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRL-----LAQVPTIGIWDDHD 100 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHH-----hhcCCEEEeccccc
Confidence 36799999999998865531100 001111222 233222 2332 23569999999999
Q ss_pred CCCC
Q 006340 132 NFGV 135 (649)
Q Consensus 132 ~~~v 135 (649)
..+-
T Consensus 101 i~~n 104 (228)
T cd07389 101 IGDN 104 (228)
T ss_pred cccc
Confidence 9653
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd02113 bact_SoxC_Moco bacterial SoxC is a member of the sulfite oxidase (SO) family of molybdopterin binding domains | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.61 Score=50.15 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=48.6
Q ss_pred cEEEEEEeCC-CCeEEEEEEeCC-cCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCc
Q 006340 377 TIRALVFSVS-PILSVVAKVYDS-RSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRL 454 (649)
Q Consensus 377 ~IrvlvFs~s-~~~~V~v~id~~-~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~ 454 (649)
.|+=-+|++. .|.+|+|++||+ .|..+++.... ..-+=..|...|.+ ..|.| +|.++|+|..|++
T Consensus 228 ~i~G~A~sG~~~I~rVEVS~DgG~tW~~A~l~~~~-------~~~aW~~w~~~w~~---~~g~~---~i~~RA~D~~G~~ 294 (326)
T cd02113 228 EISGLAWSGRGRIRRVDVSFDGGRTWQDARLEGPV-------LPKALTRFRLPWKW---DGRPA---VLQSRATDETGYV 294 (326)
T ss_pred EEEEEEECCCCCEEEEEEEcCCCCCceECccCCCC-------CCCceEEEeEEEEc---CCCeE---EEEEEEEcCCCCC
Confidence 6888999766 599999999988 59876541111 11122578888854 34555 7999999999998
Q ss_pred eee
Q 006340 455 SSS 457 (649)
Q Consensus 455 ~~~ 457 (649)
...
T Consensus 295 QP~ 297 (326)
T cd02113 295 QPT 297 (326)
T ss_pred CCC
Confidence 753
|
SoxC is involved in oxidation of sulfur compounds during chemolithothrophic growth. Together with SoxD, a small c-type heme containing subunit, it forms a hetrotetrameric sulfite dehydrogenase. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=88.57 E-value=3.8 Score=42.19 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=60.0
Q ss_pred eEEEEeCCeeEEEEEecCCCccCCCCC----CCC-------CCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCc
Q 006340 162 SVTVQIGDEKHLFVGFDSTMSVGLRGP----TNL-------FGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSF 230 (649)
Q Consensus 162 ~~~~~~~~g~~~fIglD~~~~pG~~~p----~~~-------~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~ 230 (649)
+..++.++.++.|++............ ... ........++.+.++++++++ +...+|++.|.-...
T Consensus 121 p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~r~---~~D~vIv~~HwG~e~ 197 (250)
T PF09587_consen 121 PAIIEVNGVKIAFLGYTDGENGYSSANGNRPYGFSYRPDKAGLNPNRPGIERIKEDIREARK---KADVVIVSLHWGIEY 197 (250)
T ss_pred eEEEEECCEEEEEEEEEcCCCCCccccccccccccccccccccccccchHHHHHHHHHHHhc---CCCEEEEEeccCCCC
Confidence 467778899999999865542211100 000 011223345777777777652 346899999964333
Q ss_pred cCCC-CchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 231 SASS-HSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 231 ~~~~-~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
...+ +...++..-+.+.++++++.+|.|..++
T Consensus 198 ~~~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~ 230 (250)
T PF09587_consen 198 ENYPTPEQRELARALIDAGADIIIGHHPHVIQP 230 (250)
T ss_pred CCCCCHHHHHHHHHHHHcCCCEEEeCCCCcccc
Confidence 2222 2234555556667899999999999985
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >PF13754 Big_3_4: Bacterial Ig-like domain (group 3) | Back alignment and domain information |
|---|
Probab=88.35 E-value=0.97 Score=35.29 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=31.0
Q ss_pred CeeeeccCCCCCCCCCCCceEEEEEEEeCCCCceeeeeeeEEEcCcc
Q 006340 422 DLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLS 468 (649)
Q Consensus 422 ~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~~~~~~~fs~~~~~ 468 (649)
--|.... |.. .+|.| .|+|+|+|..|.+.......|.|+-..
T Consensus 12 G~Ws~t~-~~~-~dG~y---~itv~a~D~AGN~s~~~~~~~tiDtta 53 (54)
T PF13754_consen 12 GNWSFTV-PAL-ADGTY---TITVTATDAAGNTSTSSSVTFTIDTTA 53 (54)
T ss_pred CcEEEeC-CCC-CCccE---EEEEEEEeCCCCCCCccceeEEEeCCC
Confidence 4566654 434 89998 799999999999987743458887543
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=86.97 E-value=0.86 Score=47.36 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=42.3
Q ss_pred HHHHHHHHHhcccccCCCCceEEEEEecCCCc-cC---------------------CCCchhHHHHHHHhCCceEEEeCc
Q 006340 199 LLTEIDSELSQWNSQSTKPVTKITFGHFPVSF-SA---------------------SSHSGRSLQDIFLKHSLSAYLCGH 256 (649)
Q Consensus 199 qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~-~~---------------------~~~~~~~l~~ll~~~~v~l~L~GH 256 (649)
-+-|++.+|.... ...+++++|.||-... +. ....+..|...++.|++...+.||
T Consensus 254 slpwlk~dl~~~a---adgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGh 330 (392)
T COG5555 254 SLPWLKVDLIYSA---ADGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGH 330 (392)
T ss_pred cCcceeccceeec---cCCCceeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEecccc
Confidence 4568888887654 2457999999984321 10 011235788888899999999999
Q ss_pred ccCCC
Q 006340 257 LHTRF 261 (649)
Q Consensus 257 tH~~~ 261 (649)
-|...
T Consensus 331 khd~~ 335 (392)
T COG5555 331 KHDFN 335 (392)
T ss_pred ccccc
Confidence 99773
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.53 E-value=24 Score=36.41 Aligned_cols=177 Identities=16% Similarity=0.113 Sum_probs=89.9
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||+++|+|+=-.+ .| ..++..+.....+.++||||+-|--+-++..-. |+.|+++++. +.
T Consensus 1 mriLfiGDvvGk~---Gr-~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git---------~k~y~~l~~~-----G~-- 60 (266)
T COG1692 1 MRILFIGDVVGKP---GR-KAVKEHLPQLKSKYKIDFVIVNGENAAGGFGIT---------EKIYKELLEA-----GA-- 60 (266)
T ss_pred CeEEEEecccCcc---hH-HHHHHHhHHHHHhhcCcEEEEcCccccCCcCCC---------HHHHHHHHHh-----CC--
Confidence 6899999986443 22 234455533334679999999999887765321 5567766543 22
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhccccc-ccccC-CCCcc--ceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCC
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHSI-NGQLG-RKQNV--NSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPA 196 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~-~~~l~-~~~~~--~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~ 196 (649)
- +...|||=...- ...++..++.. .+.+. .++.. ++..+..++.++.++-+-..... | ..+
T Consensus 61 -d-viT~GNH~wd~~----ei~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m----~----~~~- 125 (266)
T COG1692 61 -D-VITLGNHTWDQK----EILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFM----P----PAL- 125 (266)
T ss_pred -C-EEecccccccch----HHHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccC----c----ccc-
Confidence 2 458999965421 11111111100 00000 00111 14456677777777655321110 0 011
Q ss_pred HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 197 DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 197 ~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
++-.+.+++.+.+.+. +.+.+|+=.|--... +. ..+- ..-+..+.+++-=|||-+.
T Consensus 126 d~PF~~~d~l~~~~~~---~~~~iiVDFHAEtTS----EK-~a~g-~yldGrvsavvGTHTHV~T 181 (266)
T COG1692 126 DNPFKAADKLLDEIKL---GTDLIIVDFHAETTS----EK-NAFG-WYLDGRVSAVVGTHTHVPT 181 (266)
T ss_pred CCHHHHHHHHHHhCcc---CCceEEEEccccchh----hh-hhhh-eEEcCeEEEEEeccCcccc
Confidence 2234456666665542 223666667742211 10 0111 1112258999999999775
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=83.47 E-value=7.3 Score=42.00 Aligned_cols=24 Identities=21% Similarity=0.520 Sum_probs=21.2
Q ss_pred hHHHHHHHhCCceEEEeCcccCCC
Q 006340 238 RSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 238 ~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
+.+.++|++-+-...++.|+|..+
T Consensus 208 p~~~eLL~~LkP~yWfsAHLH~KF 231 (456)
T KOG2863|consen 208 PALEELLEDLKPQYWFSAHLHVKF 231 (456)
T ss_pred hHHHHHHHHhCcchhhhhhHhhHH
Confidence 568889988889999999999886
|
|
| >PLN02252 nitrate reductase [NADPH] | Back alignment and domain information |
|---|
Probab=81.98 E-value=2.1 Score=52.16 Aligned_cols=74 Identities=11% Similarity=-0.058 Sum_probs=48.4
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCCc-CCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCC
Q 006340 377 TIRALVFSV--SPILSVVAKVYDSR-SGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGR 453 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~~-~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~ 453 (649)
.|+=-+||+ ..|++|+|++||+. |..+++.....+.+. ++.-.=-+|.+.|.... ..|.+ .|.|+|+|..|+
T Consensus 361 ~i~G~A~sggg~~I~rVEVS~DgG~tW~~a~l~~~~~~~~~-g~~~~W~~W~~~~~~~~-~~g~~---~i~vRA~D~~g~ 435 (888)
T PLN02252 361 TMKGYAYSGGGRKVTRVEVSLDGGETWRLCDLDHPEKPTKY-GKYWCWCFWSLDVEVLD-LLGAK---EIAVRAWDESMN 435 (888)
T ss_pred EEEEEEECCCCCceEEEEEEcCCCCcceeCccCCCCCcccc-CCccEEEEEEEeEeccc-CCCce---EEEEEEEcCCCC
Confidence 688899974 47999999999884 988766332222110 11011246777773222 24666 799999999998
Q ss_pred ce
Q 006340 454 LS 455 (649)
Q Consensus 454 ~~ 455 (649)
+.
T Consensus 436 ~Q 437 (888)
T PLN02252 436 TQ 437 (888)
T ss_pred cC
Confidence 75
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 649 | |||
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-08 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 6e-08 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 4e-07 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 7e-07 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 6e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 2e-04 |
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 2e-08
Identities = 34/304 (11%), Positives = 88/304 (28%), Gaps = 66/304 (21%)
Query: 1 MKYLVFLLLLFITTPISHAETTEKADGRRVIQLREGPEHVIWAVQLSDLHF-SVHHPDRA 59
+++ + + ++ + + + + + + +D+H+ + D
Sbjct: 2 IRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMV--VTTDVHYFAPSLTDNG 59
Query: 60 SDFKRIVGP---------------ALSMIS---PSLVLITGDLTDGKSKDLLTMKQNEVE 101
F++ V L+ + +++I+GDLT+ E
Sbjct: 60 KAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTN------------NGE 107
Query: 102 WMEYQNVMQ--DVIKRSGLEKSIFYDIRGNHDNFGV-----------PIVGGSF----DF 144
++ + + ++++G + + + GNHD P S
Sbjct: 108 KTSHEELAKKLTQVEKNGTQ---VFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKI 164
Query: 145 FSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTM--SVGLRGPTNLFGHPADQLLTE 202
+S + + S + + D+ + + +G G L
Sbjct: 165 YSDFGYEDAISSDEFSLSYLAAPSSKVW-LLMLDTAIYKTNMQQGNPTTEGGLTAGTLDW 223
Query: 203 IDSELSQWNSQSTKPVTKITFGHFP-VSFSASSHSGRSLQD------IFLKHSLSAYLCG 255
I + I H + G ++ + ++ L G
Sbjct: 224 IKESSAL---AKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSG 280
Query: 256 HLHT 259
H+HT
Sbjct: 281 HIHT 284
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 54.2 bits (130), Expect = 6e-08
Identities = 41/257 (15%), Positives = 72/257 (28%), Gaps = 52/257 (20%)
Query: 17 SHAETTEKADGRRVIQLREGPEHVIWAVQLSDLHF------SVHHPDRASDFKRIVGPAL 70
+ KA ++ E P + +SD H D ++
Sbjct: 2 AMGIRNSKAYVEHRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLN 61
Query: 71 SM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIK-RSGLEKSIFYDIRG 128
+ P ++ TGDL D Y+ + V + L + + + G
Sbjct: 62 QSGLRPDAIVFTGDLADKGEPA------------AYRKLRGLVEPFAAQLGAELVW-VMG 108
Query: 129 NHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGP 188
NHD+ F + + V I + D+++ P
Sbjct: 109 NHDDRAE-----LRKFLLDEA--PSMAPLDRV----CMIDG--LRIIVLDTSV------P 149
Query: 189 TNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHS-------GRSLQ 241
+ G L + EL+ + I H P S + +L
Sbjct: 150 GHHHGEIRASQLGWLAEELAT---PAPDGT--ILALHHPPIPSVLDMAVTVELRDQAALG 204
Query: 242 DIFLKHSLSAYLCGHLH 258
+ + A L GHLH
Sbjct: 205 RVLRGTDVRAILAGHLH 221
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 24/195 (12%)
Query: 75 PSLVLITGDL--TDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDN 132
+L GD G ++ + +Q +DV L ++ + GNHD+
Sbjct: 44 ADFILSLGDNFYFTGV---------HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDH 94
Query: 133 FGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLF 192
G + +SK S + + D+ G +
Sbjct: 95 LGNV---SAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGN-SDDFVS 150
Query: 193 GHPADQLLTEIDSELSQWNSQSTKPVT---KITFGHFPVSFSASSHSG-----RSLQDIF 244
P + W + + GH+PV +S + H + L +
Sbjct: 151 QQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPV-WSIAEHGPTHCLVKQLLPLL 209
Query: 245 LKHSLSAYLCGHLHT 259
H ++AYLCGH H
Sbjct: 210 TTHKVTAYLCGHDHN 224
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 7e-07
Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 51/230 (22%)
Query: 44 VQLSDLHFSVH------HPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMK 96
+SD HF D + +V ++ P V+++GD+ + +
Sbjct: 4 AHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPE----- 58
Query: 97 QNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGR 156
EYQ Q + L ++ I GNHD+ + F ++
Sbjct: 59 -------EYQVARQIL---GSLNYPLYL-IPGNHDDKAL---------FLEYLQPLCPQL 98
Query: 157 KQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTK 216
+ N++ + D + DS+ G D+ ++ ++++L + K
Sbjct: 99 GSDANNMRCAVDDFATRLLFIDSSR------AGTSKGWLTDETISWLEAQLFE---GGDK 149
Query: 217 PVTKITFGHFPVSFSASSHS-------GRSLQDIFLKHS-LSAYLCGHLH 258
P F H P ++ G L + + L+ CGH H
Sbjct: 150 PA--TIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 6e-06
Identities = 25/219 (11%), Positives = 57/219 (26%), Gaps = 41/219 (18%)
Query: 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWM 103
+ S+ ++ V A + + G+L +K
Sbjct: 9 LATSNPM------GDLEALEKFVKLAPDT-GADAIALIGNLMPKAAKS-----------R 50
Query: 104 EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSV 163
+Y + + + Y + G D PI + + ++ ++
Sbjct: 51 DYAAFFRILSE---AHLPTAY-VPGPQDA---PIWEYLREAANVELVHPEMRNVHE---- 99
Query: 164 TVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQS---TKPVTK 220
T +L G G G P + + ++++ ++ K K
Sbjct: 100 TFTFWRGPYLVAGVG--------GEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPK 151
Query: 221 ITFGHFPVSFSASSHSG-RSLQDIFLKHSLSAYLCGHLH 258
I H + G + + H+ L
Sbjct: 152 IFLFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKG 190
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 2e-05
Identities = 69/412 (16%), Positives = 131/412 (31%), Gaps = 86/412 (20%)
Query: 11 FITTPISHAETTEKADGRRV-IQLREGPEHVIW-AVQLSDLHFSVHHPDRASDFKRIVGP 68
F+ +PI E + + R+ I+ R+ ++ Q+ F+ ++ R + ++
Sbjct: 93 FLMSPI-KTEQRQPSMMTRMYIEQRD----RLYNDNQV----FAKYNVSRLQPYLKLRQA 143
Query: 69 ALSMISPSLVLITGDLTDGKS---------KDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119
L + VLI G L GK+ + ++ W+ N+ + LE
Sbjct: 144 LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL---NLKNCNSPETVLE 200
Query: 120 K--SIFYDIRGNHDNFGVPIVGGSFDFFS-KHSINGQLGRKQNVNSVTV--QIGDEKHLF 174
+ Y I N + S + + L K N + V + + K
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260
Query: 175 VGFD-------------STMSVGLRGPTNLFGHPADQLLTEIDSE--LSQWNSQSTK--P 217
F+ T + T++ LT + + L ++ + P
Sbjct: 261 A-FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319
Query: 218 VTKITFGHFPVS-FSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLK-------RHH 269
+T +S + S G + D KH C L T +L R
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWD-NWKH----VNCDKLTTIIESSLNVLEPAEYRKM 374
Query: 270 YMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILAIDRGH 329
+ LS F + H IP + W +++ KS M ++ +
Sbjct: 375 FDR---LS--VFPPSAH-IP----------TILLSLIW-FDV---IKSDVMVVVNKLHKY 414
Query: 330 ISYVDIDFKSGFRKTIVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRAL 381
S V+ K TI +P+ L+ + +Y + Y +
Sbjct: 415 -SLVEKQPKES---TISIPSIYLELK---VKLENEYALHRSIVDHYNIPKTF 459
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 5e-04
Identities = 81/642 (12%), Positives = 193/642 (30%), Gaps = 212/642 (33%)
Query: 91 DLLTMKQNEV-------------EWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPI 137
L KQ E+ +++ + ++ ++ + ++ + R N
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFL--MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV- 125
Query: 138 VGGSFDFFSKHSINGQLGRKQNVNSVT---VQIGDEKHLFVGFDSTMSVGLRGPTNLFGH 194
F+K++++ R Q + +++ K++ + G+ G G
Sbjct: 126 -------FAKYNVS----RLQPYLKLRQALLELRPAKNVLI-------DGVLG----SG- 162
Query: 195 PADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLC 254
+ ++ S K K+ F F ++ + +S ++ ++ K L
Sbjct: 163 ---------KTWVALDVCLSYKVQCKMDFKIFWLNL-KNCNSPETVLEMLQK------LL 206
Query: 255 GHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDW 314
+ +D N+ S+ + I L S + +
Sbjct: 207 --------------YQIDPNWTSR---SDHSSNIKL----RIHSIQAELRRLLKS----K 241
Query: 315 RKSRAMRILAIDRGHISYVDI----DFKSGFRKTIVVPTFPLDSRFMSRSSSQKYECEHM 370
+ +L ++ + K ++ F + F+S +++ +H
Sbjct: 242 PYENCLLVL--L--NVQNAKAWNAFNLSC---KILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 371 VAQSYATIRALVFSVSPILSVVAKVYDSRSGK--------HDLVME---ELMRK---RTD 416
++ + + S++ K D R + + E +R D
Sbjct: 295 ---------SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345
Query: 417 NSSRGDLYA------------APWNYRA-------FEDSSP------QRFWLEIEVTDIM 451
N + P YR F S+ W ++ +D+M
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 452 GRLSSSELRPFSINGLSAKISWTWKEFFVMGCQWDTLYYPLLWFAMYFLFSILIVPKALL 511
+ ++L +S L K KE T+ P +
Sbjct: 406 --VVVNKLHKYS---LVEK---QPKES--------TISIP------------------SI 431
Query: 512 ILSKKQYTYKNFAANRGFINCIAWVLQELCKMHVV-------WYGILGY----------- 553
L K +A +R ++ + + ++ +Y +G+
Sbjct: 432 YLELKVKLENEYALHRSIVDHYN-IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490
Query: 554 -LFYLVL--FPWFVGQVFTDGESWGYMTYMGWVVRALDNQESHKYI----GSPDVMVIVL 606
LF +V F + ++ D +W + ++ L + YI + +V +
Sbjct: 491 TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK--PYICDNDPKYERLVNAI 548
Query: 607 PHIVFVVLPAILVSAALAAEKELYRVSLSGKK----EDDHEQ 644
+ + ++ S +L R++L + E+ H+Q
Sbjct: 549 LDFLPKIEENLICS----KYTDLLRIALMAEDEAIFEEAHKQ 586
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 2e-04
Identities = 23/237 (9%), Positives = 66/237 (27%), Gaps = 39/237 (16%)
Query: 46 LSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEY 105
+ + +R ++ G ++ P ++++ G++ ++ + + +
Sbjct: 11 IKNFK------ERFDLLPKLKG-VIAEKQPDILVVVGNILKNEALEKEYERAHLARREPN 63
Query: 106 QNVMQDVIKRSGLEKSIFYD-----------IRGNHDNFGVPIVGGSFDFFSKHSINGQL 154
+ V+ + F+ + G +D P+ + +
Sbjct: 64 RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKND---APLKIFLRAAYEAETAYP-- 118
Query: 155 GRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQS 214
+ ++ E +GF ++ + +P + E
Sbjct: 119 -NIRVLHEGFAGWRGE-FEVIGFGGLLTEHEFEEDFVLKYPRWYV------EYILKFVNE 170
Query: 215 TKPVTKITFGHFP-------VSFSASSHSG-RSLQDIFLKHSLSAYLCGHLHTRFGK 263
KP +T + P + H G + I + + GH+
Sbjct: 171 LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL 227
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 649 | |||
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.88 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.86 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.85 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.84 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.81 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.79 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.79 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.78 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.63 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.62 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.61 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.54 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.49 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.45 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.44 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.42 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.34 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.33 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.31 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.26 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.25 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.22 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.2 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.18 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.17 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.08 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.05 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.93 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.87 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.79 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.6 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.48 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.48 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.42 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.36 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.34 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.85 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.78 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.72 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.68 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.66 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.59 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.45 | |
| 3pe9_A | 98 | Fibronectin(III)-like module; CBHA, beta-sandwich, | 97.18 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.11 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.04 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.01 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.97 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.95 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.92 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.75 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.62 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 96.57 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.25 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 96.14 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 96.04 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 95.91 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 94.68 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 93.89 | |
| 1ogp_A | 393 | Sulfite oxidase; oxidoreductase, molybdenum cofact | 92.95 | |
| 2a9d_A | 372 | Sulfite oxidase; molybdopterin, molybdenum, oxidor | 92.12 | |
| 1sox_A | 466 | Sulfite oxidase; oxidoreductase, sulfite oxidation | 91.13 | |
| 2blf_A | 373 | SORA, sulfite\:cytochrome C oxidoreductase subunit | 90.75 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 89.33 | |
| 2bih_A | 474 | Nitrate reductase [NADPH]; flavoprotein, nitrate a | 84.57 | |
| 2bii_A | 424 | Nitrate reductase [NADPH]; FAD, flavoprotein, heme | 84.5 | |
| 2xts_A | 390 | Sulfite dehydrogenase; oxidoreductase-electron tra | 82.65 |
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=204.74 Aligned_cols=251 Identities=15% Similarity=0.158 Sum_probs=156.6
Q ss_pred EEEEeCCCCCCceEEEEEcCCCCCCCCC------CcHHHHHHHHHHHHhc--cCCcEEEEcCCCCCCCCcchhhhhhhhH
Q 006340 29 RVIQLREGPEHVIWAVQLSDLHFSVHHP------DRASDFKRIVGPALSM--ISPSLVLITGDLTDGKSKDLLTMKQNEV 100 (649)
Q Consensus 29 ~~~~~~~~p~~~~~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~~--~kPD~VIitGDLtd~~~~~~~~s~Q~e~ 100 (649)
..++.++.+...|+|+||||+|++.... +....++++++. +++ .+||+|+++|||++.+..+
T Consensus 14 ~~l~~~~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~-i~~~~~~~d~vi~~GDl~~~~~~~--------- 83 (330)
T 3ib7_A 14 HRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQ-LNQSGLRPDAIVFTGDLADKGEPA--------- 83 (330)
T ss_dssp --CEECSSCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHH-HHHHTCCCSEEEECSCCBTTCCHH---------
T ss_pred hhcccccCCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHH-HHhcCCCCCEEEECCCCCCCCCHH---------
Confidence 4677778888889999999999976431 235578888844 544 7999999999999987632
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCC
Q 006340 101 EWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDST 180 (649)
Q Consensus 101 eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~ 180 (649)
+|+.+.+.++.+.+.. +.|++.++||||... .+...+.... ...... .+.+.. +++.|+++|+.
T Consensus 84 ~~~~~~~~l~~l~~~~---~~pv~~v~GNHD~~~--------~~~~~~~~~~--~~~~~~-~~~~~~--~~~~~i~lds~ 147 (330)
T 3ib7_A 84 AYRKLRGLVEPFAAQL---GAELVWVMGNHDDRA--------ELRKFLLDEA--PSMAPL-DRVCMI--DGLRIIVLDTS 147 (330)
T ss_dssp HHHHHHHHHHHHHHHH---TCEEEECCCTTSCHH--------HHHHHHHCCC--CCCSCC-CEEEEE--TTEEEEECCCC
T ss_pred HHHHHHHHHHHHHhhc---CCCEEEeCCCCCCHH--------HHHHHhcccc--cccCCc-ceEEEe--CCEEEEEecCC
Confidence 3455566666654321 359999999999742 1111111000 011111 244444 45889999987
Q ss_pred CccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC-------CCCchhHHHHHHHhCCceEEE
Q 006340 181 MSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA-------SSHSGRSLQDIFLKHSLSAYL 253 (649)
Q Consensus 181 ~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~-------~~~~~~~l~~ll~~~~v~l~L 253 (649)
.. + ...|.+.++|++||++.|++.+ + ...|++.|+|+.... ...+.+.+.++++++++++++
T Consensus 148 ~~-~-----~~~~~~~~~q~~wl~~~l~~~~----~-~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~ 216 (330)
T 3ib7_A 148 VP-G-----HHHGEIRASQLGWLAEELATPA----P-DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAIL 216 (330)
T ss_dssp CT-T-----CCSBCCCHHHHHHHHHHTTSCC----T-TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEE
T ss_pred CC-C-----CCCCccCHHHHHHHHHHHHhcc----c-CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEE
Confidence 63 2 2457899999999999998754 1 246777787654321 123456799999999999999
Q ss_pred eCcccCCCCCccceeeeccccccccccccCCccccccCCcccccCCCC-CCCccceeeecccccccceEEEEEcCCEEEE
Q 006340 254 CGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAP-SIGEFWEWEMGDWRKSRAMRILAIDRGHISY 332 (649)
Q Consensus 254 ~GHtH~~~g~~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~-~~~g~~ele~~dw~~~r~yrvl~iD~~~~sf 332 (649)
|||+|.............+.+ ..|..... ...|.... ...+++|+++.++++.+.+
T Consensus 217 ~GH~H~~~~~~~~g~~~~~~g-------------------s~~~~~~~~~~~g~~~~----~~~~~gy~iv~i~~~~~~~ 273 (330)
T 3ib7_A 217 AGHLHYSTNATFVGIPVSVAS-------------------ATCYTQDLTVAAGGTRG----RDGAQGCNLVHVYPDTVVH 273 (330)
T ss_dssp ECSSSSCEEEEETTEEEEECC-------------------CSSCEECTTSCTTCCCE----ESCSCEEEEEEECSSCEEE
T ss_pred ECCCCCcccceECCEEEEecC-------------------cceeccCCCCCCcceec----cCCCCceEEEEEECCCeEE
Confidence 999998863211111111111 11110000 01111111 1245789999999999988
Q ss_pred EEEeecc
Q 006340 333 VDIDFKS 339 (649)
Q Consensus 333 ~d~~~~~ 339 (649)
..+.++.
T Consensus 274 ~~v~~~~ 280 (330)
T 3ib7_A 274 SVIPLGG 280 (330)
T ss_dssp EEEECSC
T ss_pred EEeccCC
Confidence 8777764
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=207.37 Aligned_cols=208 Identities=17% Similarity=0.155 Sum_probs=131.3
Q ss_pred CCCCceEEEEEcCCCCCCCCC--------------------CcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhh
Q 006340 36 GPEHVIWAVQLSDLHFSVHHP--------------------DRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTM 95 (649)
Q Consensus 36 ~p~~~~~fv~ISDlHls~~~~--------------------~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s 95 (649)
..+..++|+|+||+|++.... .....+++++ +.++..+||+||++||+++.+...
T Consensus 35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~d~vi~~GDl~~~~~~~---- 109 (443)
T 2xmo_A 35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFL-ADVESKKTDVLIISGDLTNNGEKT---- 109 (443)
T ss_dssp CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHH-HHHHHHTCSEEEEESCCBSSCCHH----
T ss_pred cCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHH-HHHHHcCCCEEEECCCCCCCCCHH----
Confidence 344579999999999975320 0134566776 445567899999999999977532
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCC--C---------chhhhccccc-cc---ccCCCCcc
Q 006340 96 KQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVG--G---------SFDFFSKHSI-NG---QLGRKQNV 160 (649)
Q Consensus 96 ~Q~e~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~--~---------~~~~~~~ys~-~~---~l~~~~~~ 160 (649)
+++.+.+.++++.. .+.|++.++||||........ . ..+.|.++.. .. ........
T Consensus 110 -----~~~~~~~~l~~l~~----~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (443)
T 2xmo_A 110 -----SHEELAKKLTQVEK----NGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFS 180 (443)
T ss_dssp -----HHHHHHHHHHHHHH----TTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSS
T ss_pred -----HHHHHHHHHHHHHh----CCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCC
Confidence 23345556666543 136999999999986421110 0 0111221110 00 00000001
Q ss_pred ceEEEEeCCeeEEEEEecCCCccC--CCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC------
Q 006340 161 NSVTVQIGDEKHLFVGFDSTMSVG--LRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA------ 232 (649)
Q Consensus 161 ~~~~~~~~~g~~~fIglD~~~~pG--~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~------ 232 (649)
..|.+ ...++++|+++|+..... ...|....|.++++|++||++.|++.+. +..++|+++|+|+....
T Consensus 181 ~~y~~-~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~---~~~~~Iv~~H~p~~~~~~~~~~~ 256 (443)
T 2xmo_A 181 LSYLA-APSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK---NGAKLIPVLHHNLTDHNDVIQKG 256 (443)
T ss_dssp SCEEE-CSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH---TTCEEEEECSSBSSCSSCC--CC
T ss_pred ceEEE-ecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH---cCCeEEEEECCCCcccccccccc
Confidence 12333 234679999999876321 1112234578999999999999987652 23478999999976421
Q ss_pred -CCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 233 -SSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 233 -~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
...+.+++.+++++++++++||||+|...
T Consensus 257 ~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 286 (443)
T 2xmo_A 257 YTINYNQQVIDALTEGAMDFSLSGHIHTQN 286 (443)
T ss_dssp SBCTTHHHHHHHHHHTTCCEEEECSSCSCE
T ss_pred cccccHHHHHHHHHHcCCeEEEECCcccCc
Confidence 12346789999999999999999999875
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=189.34 Aligned_cols=182 Identities=23% Similarity=0.330 Sum_probs=121.0
Q ss_pred eEEEEEcCCCCCCCCC------CcHHHHHHHHHHHHhc--cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP------DRASDFKRIVGPALSM--ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~~--~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
|||+|+||+|++.... +....++++++. +++ .+||+|+++||+++.+... +| +.+.+.+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~-~~~~~~~~d~vi~~GDl~~~~~~~---------~~---~~~~~~l 67 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQ-LNALRERPDAVVVSGDIVNCGRPE---------EY---QVARQIL 67 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHH-HHTCSSCCSEEEEESCCBSSCCHH---------HH---HHHHHHH
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHH-HHhcCCCCCEEEECCCCCCCCCHH---------HH---HHHHHHH
Confidence 6899999999986321 223567888844 444 3789999999999876531 23 3333433
Q ss_pred HHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcc-cccccccCCC-CccceEEEEeCCeeEEEEEecCCCccCCCCCCC
Q 006340 113 IKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK-HSINGQLGRK-QNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTN 190 (649)
Q Consensus 113 ~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~-ys~~~~l~~~-~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~ 190 (649)
.+ + +.|++.++||||... ...+.+.. |.. .... +.. .+. +..+++.|+++|+.... .
T Consensus 68 ~~---l-~~p~~~v~GNHD~~~-----~~~~~~~~~~~~---~~~~~~~~-~~~--~~~~~~~~i~ld~~~~~------~ 126 (274)
T 3d03_A 68 GS---L-NYPLYLIPGNHDDKA-----LFLEYLQPLCPQ---LGSDANNM-RCA--VDDFATRLLFIDSSRAG------T 126 (274)
T ss_dssp TT---C-SSCEEEECCTTSCHH-----HHHHHHGGGSGG---GCSCGGGC-CEE--ECSSSSEEEECCCCCTT------C
T ss_pred Hh---c-CCCEEEECCCCCCHH-----HHHHHhhhhhcC---cccCCCce-EEE--EEeCCEEEEEEeCCCCC------C
Confidence 32 3 469999999999852 11112221 110 0111 111 233 34567999999987632 2
Q ss_pred CCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC-------CCCchhHHHHHHHhC-CceEEEeCcccCCC
Q 006340 191 LFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA-------SSHSGRSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 191 ~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~-------~~~~~~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
..|.++++|++||++.|++.+ ..++|+++|+|+.... ...+..++.++++++ ++++++|||+|..+
T Consensus 127 ~~~~~~~~~~~wl~~~l~~~~-----~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~ 200 (274)
T 3d03_A 127 SKGWLTDETISWLEAQLFEGG-----DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT 200 (274)
T ss_dssp SSBCCCHHHHHHHHHHHHHHT-----TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCE
T ss_pred CCCeeCHHHHHHHHHHHHhCC-----CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCch
Confidence 456899999999999998752 2488999999876421 112456899999998 79999999999875
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=193.84 Aligned_cols=203 Identities=18% Similarity=0.208 Sum_probs=127.7
Q ss_pred CceEEEEEcCCCCCCCCCC-------------cHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHPD-------------RASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEY 105 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~-------------~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y 105 (649)
..|+|++|||+|++...+. ....+++++ +.+++.+||+||++||+++.+.... . ..++.|
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~d~vi~~GD~~~~~~~~~---~---~~~~~~ 76 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAV-LQWRRERVQCVVQLGDIIDGHNRRR---D---ASDRAL 76 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHH-HHHHHTTCSEEEECSCCBCTHHHHT---T---CHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHH-HHHHhcCCCEEEECCCccCCCCCcc---h---HHHHHH
Confidence 3699999999999874321 124577777 4455689999999999999764221 0 113445
Q ss_pred HHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc---------cccCCCCccceEEEEeCCeeEEEEE
Q 006340 106 QNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN---------GQLGRKQNVNSVTVQIGDEKHLFVG 176 (649)
Q Consensus 106 ~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~---------~~l~~~~~~~~~~~~~~~g~~~fIg 176 (649)
+.+++.+.+ + +.|++.++||||..+.. ...+...+... ..+...+.. .+.+.. .++++||+
T Consensus 77 ~~~~~~l~~---~-~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~-~~~~~~i~ 146 (322)
T 2nxf_A 77 DTVMAELDA---C-SVDVHHVWGNHEFYNFS----RPSLLSSRLNSAQRTGTDTGSDLIGDDIY-AYEFSP-APNFRFVL 146 (322)
T ss_dssp HHHHHHHHT---T-CSEEEECCCHHHHHHCC----HHHHHTSTTCCCC------CEECGGGTCC-CEEEEE-ETTEEEEE
T ss_pred HHHHHHHHh---c-CCcEEEecCCCCcccCC----HHHHhhhhCCcccccccccccccCCCCce-EEEEec-CCCEEEEE
Confidence 666666554 2 36999999999985311 11111111100 000000111 234433 14588999
Q ss_pred ecCCCcc--C-------------------CC-----CC----------CCCCCCCCHHHHHHHHHHHhcccccCCCCceE
Q 006340 177 FDSTMSV--G-------------------LR-----GP----------TNLFGHPADQLLTEIDSELSQWNSQSTKPVTK 220 (649)
Q Consensus 177 lD~~~~p--G-------------------~~-----~p----------~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~ 220 (649)
+|+.... | +. .| ..+.|.+.++|++||+++|++.++ +..++
T Consensus 147 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~---~~~~~ 223 (322)
T 2nxf_A 147 LDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH---KQERV 223 (322)
T ss_dssp CCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH---HTCEE
T ss_pred EcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh---cCCcE
Confidence 9986531 0 00 01 013477889999999999987652 12478
Q ss_pred EEEEecCCCccCC-----CCchhHHHHHHHhC-CceEEEeCcccCCC
Q 006340 221 ITFGHFPVSFSAS-----SHSGRSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 221 Ilf~H~P~~~~~~-----~~~~~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
|+++|+|+..... ..+.+++.++++++ ++++++|||+|...
T Consensus 224 iv~~H~p~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~ 270 (322)
T 2nxf_A 224 LIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGG 270 (322)
T ss_dssp EEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCE
T ss_pred EEEEccCCCCCCCCccccccCHHHHHHHHhcCCCeEEEEcCCcCCCC
Confidence 9999999874221 11567899999998 69999999999875
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=186.24 Aligned_cols=208 Identities=20% Similarity=0.244 Sum_probs=121.1
Q ss_pred CCCceEEEEEcCCCCCCCCC---CcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 37 PEHVIWAVQLSDLHFSVHHP---DRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 37 p~~~~~fv~ISDlHls~~~~---~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
|++.++|+++||+|.+...+ .....+.+.+.+.++..+||+||++||+++......... .+| .+.++++.
T Consensus 3 ~~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~----~~~---~~~~~~~~ 75 (313)
T 1ute_A 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKD----KRF---QETFEDVF 75 (313)
T ss_dssp CCCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTC----THH---HHHTTTTS
T ss_pred CCCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcch----HHH---HHHHHHHc
Confidence 44679999999999986432 112345555655566679999999999976532111000 112 12222211
Q ss_pred HhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeC--CeeEEEEEecCCCccCCCC----
Q 006340 114 KRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIG--DEKHLFVGFDSTMSVGLRG---- 187 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~--~g~~~fIglD~~~~pG~~~---- 187 (649)
....+.+.|++.++||||..+.. ..... |.+.. ........+....+..+ +++++||++|+....+...
T Consensus 76 ~~~~l~~~p~~~v~GNHD~~~~~--~~~~~-~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 76 SDPSLRNVPWHVLAGNHDHLGNV--SAQIA-YSKIS--KRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp CSGGGTTCCEEECCCHHHHHSCH--HHHHH-GGGTS--TTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred CchhhcCCCEEEECCCCccCCCc--ccccc-ccccC--CCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 10002246999999999985310 00001 11111 11111111111222222 2589999999865322110
Q ss_pred --C-CCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCC----chhHHHHHHHhCCceEEEeCcccCC
Q 006340 188 --P-TNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSH----SGRSLQDIFLKHSLSAYLCGHLHTR 260 (649)
Q Consensus 188 --p-~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~----~~~~l~~ll~~~~v~l~L~GHtH~~ 260 (649)
| ....|.+.++|++||+++|++.+ ..++|+++|+|+....... ..+.+.+++++++++++||||+|..
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~~-----~~~~iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAAK-----EDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHCC-----CSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhCC-----CCeEEEEECCCCccCCCCCCcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 0 01234567899999999998753 2589999999987422111 1356788899999999999999976
Q ss_pred C
Q 006340 261 F 261 (649)
Q Consensus 261 ~ 261 (649)
+
T Consensus 226 ~ 226 (313)
T 1ute_A 226 Q 226 (313)
T ss_dssp E
T ss_pred h
Confidence 4
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-17 Score=182.54 Aligned_cols=193 Identities=15% Similarity=0.122 Sum_probs=123.0
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSG 117 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~ 117 (649)
..++|+++||+|.+. ...+.+....+. .+||+||++||+++...... ....+|+.|.+.++.+..
T Consensus 125 ~~~~f~~~gD~~~~~-------~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~----~~~~~~~~~~~~l~~l~~--- 190 (426)
T 1xzw_A 125 VPYVFGLIGDIGQTH-------DSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPN----HDNNRWDTWGRFSERSVA--- 190 (426)
T ss_dssp CCEEEEEECSCTTBH-------HHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGG----GCTHHHHHHHHHHHHHHT---
T ss_pred CCeEEEEEEeCCCCC-------chHHHHHHHHhCCCCCCEEEeCCChhhcccCCc----ccchHHHHHHHHHHHHHh---
Confidence 569999999999752 123444333333 48999999999997643211 123458778888877643
Q ss_pred CCCceEEEecCCCCCCCCCCCCC--chhhhcccccccc--cCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCC
Q 006340 118 LEKSIFYDIRGNHDNFGVPIVGG--SFDFFSKHSINGQ--LGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFG 193 (649)
Q Consensus 118 l~~~p~~~I~GNHD~~~v~~~~~--~~~~~~~ys~~~~--l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G 193 (649)
..||+.++||||..+.+..+. ....|..+..... .+..+.. .+.+.. ++++||++|+.... +
T Consensus 191 --~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~-~ys~~~--g~~~~i~Ldt~~~~---------~ 256 (426)
T 1xzw_A 191 --YQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPL-WYAIKR--ASAHIIVLSSYSGF---------V 256 (426)
T ss_dssp --TSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTT-SEEEEE--TTEEEEECCTTSCC---------S
T ss_pred --cCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCC-eEEEEE--CCEEEEEeeCcccC---------C
Confidence 469999999999875321110 1111221110000 0000111 244554 45999999976421 1
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC---C---chhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 194 HPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS---H---SGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 194 ~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~---~---~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
...+|++||+++|+++++ ++..++|+++|+|+...... + .++.+.++|.+++++++||||+|..+.
T Consensus 257 -~~~~Q~~WL~~~L~~~~~--~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r 328 (426)
T 1xzw_A 257 -KYSPQYKWFTSELEKVNR--SETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYER 328 (426)
T ss_dssp -TTSHHHHHHHHHHHHCCT--TTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEE
T ss_pred -CCHHHHHHHHHHHHhhhh--cCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhhee
Confidence 357899999999998642 13357999999998753211 1 145688999999999999999998873
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.8e-18 Score=184.23 Aligned_cols=265 Identities=15% Similarity=0.109 Sum_probs=149.5
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSG 117 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~ 117 (649)
..++|+++||+|.+.. . .+.+....+. .+||+||++||+++...... ....+|+.|.+.++.+..
T Consensus 118 ~~~~f~~igD~~~~~~------~-~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~----~~~~~~~~~~~~l~~~~~--- 183 (424)
T 2qfp_A 118 VPYTFGLIGDLGQSFD------S-NTTLSHYELSPKKGQTVLFVGDLSYADRYPN----HDNVRWDTWGRFTERSVA--- 183 (424)
T ss_dssp CCEEEEEECSCTTBHH------H-HHHHHHHHTCSSCCCEEEECSCCSCGGGSGG----GCTHHHHHHHHHHHHHHT---
T ss_pred CCeEEEEEEeCCCCCC------h-HHHHHHHHhCCCCCCEEEEcCcccccccccc----ccchHHHHHHHHHHHHHh---
Confidence 5699999999998631 1 2344332232 38999999999998653211 113458888888887643
Q ss_pred CCCceEEEecCCCCCCCCCCCCC--chhhhc-ccccccccCCCCccc-eEEEEeCCeeEEEEEecCCCccCCCCCCCCCC
Q 006340 118 LEKSIFYDIRGNHDNFGVPIVGG--SFDFFS-KHSINGQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFG 193 (649)
Q Consensus 118 l~~~p~~~I~GNHD~~~v~~~~~--~~~~~~-~ys~~~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G 193 (649)
..||+.++||||....+..+. ....|. .|. ..........+ .+.+..+ .++||++|+... +|
T Consensus 184 --~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~-~P~~~~~~~~~~~ys~~~g--~~~~i~Ldt~~~---------~~ 249 (424)
T 2qfp_A 184 --YQPWIWTAGNHEIEFAPEINETEPFKPFSYRYH-VPYEASQSTSPFWYSIKRA--SAHIIVLSSYSA---------YG 249 (424)
T ss_dssp --TSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCC-CCGGGGTCSSTTSEEEEET--TEEEEECCTTSC---------CS
T ss_pred --cCCeEeecCCcccccCCcccccccchhhhhhcc-CCccccCCCCCcEEEEEEC--CEEEEEecCCcc---------CC
Confidence 369999999999864221111 011121 121 00000000011 3455553 699999998642 22
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC---C---chhHHHHHHHhCCceEEEeCcccCCCCC-ccc
Q 006340 194 HPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS---H---SGRSLQDIFLKHSLSAYLCGHLHTRFGK-NLK 266 (649)
Q Consensus 194 ~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~---~---~~~~l~~ll~~~~v~l~L~GHtH~~~g~-~l~ 266 (649)
.. .+|++||+++|++.++ .+..++|+++|+|+...... + -++.+.+++.+++++++||||+|..+.. .+.
T Consensus 250 ~~-~~Q~~WL~~~L~~~~~--~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~ 326 (424)
T 2qfp_A 250 RG-TPQYTWLKKELRKVKR--SETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVS 326 (424)
T ss_dssp TT-SHHHHHHHHHHHHCCT--TTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEE
T ss_pred Cc-HHHHHHHHHHHhhhcc--cCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheecccc
Confidence 22 4899999999997642 12358999999998753211 1 1346788999999999999999996531 111
Q ss_pred eeeeccccccccccccCCccccccCCcccccCCCCC--CCccceeeecccccccceEEEEE-cCCEEEEEEE
Q 006340 267 RHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPS--IGEFWEWEMGDWRKSRAMRILAI-DRGHISYVDI 335 (649)
Q Consensus 267 ~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~--~~g~~ele~~dw~~~r~yrvl~i-D~~~~sf~d~ 335 (649)
.......+..|+.+...+...++..+..++..+... .....++..-. ...-||..+.+ +++++.|+.+
T Consensus 327 ~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~-~~~~G~~~l~v~n~t~~~~~~~ 397 (424)
T 2qfp_A 327 NIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFR-EASFGHGMFDIKNRTHAHFSWN 397 (424)
T ss_dssp CCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEE-ECCCEEEEEEECSSSEEEEEEE
T ss_pred CcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEE-ecCCCEEEEEEEcCcEEEEEEE
Confidence 111111122344444434444444444444332210 01111221110 12468888888 4557777544
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.78 E-value=4e-19 Score=189.27 Aligned_cols=255 Identities=11% Similarity=-0.001 Sum_probs=141.1
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHH-HHHHHHHHHHHhcCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWM-EYQNVMQDVIKRSGL 118 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~-~Y~~vl~~L~~~~~l 118 (649)
.++|+.++|.|.+... -....+.+.+.++..+||+||++||+++.+..... ...|+ .|+++.+.+.. .
T Consensus 3 ~l~f~~igD~g~g~~~---q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~-----d~~~~~~f~~~~~~~~~---~ 71 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKG---QILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLN-----DPAWKNLYEDVYSEEKG---D 71 (342)
T ss_dssp CEEEEECCSCBSCCHH---HHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTT-----CTHHHHHTTTTSCCGGG---T
T ss_pred eEEEEEEecCCCCCch---HHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCc-----cHHHHHHHHHHhhhhhh---h
Confidence 5899999999975421 12334445455667899999999999988653211 11232 33333322101 1
Q ss_pred CCceEEEecCCCCCCCCCCCCCchhhhc-ccc---------------cccccCCCCccceEE--EEeC-----------C
Q 006340 119 EKSIFYDIRGNHDNFGVPIVGGSFDFFS-KHS---------------INGQLGRKQNVNSVT--VQIG-----------D 169 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~~v~~~~~~~~~~~-~ys---------------~~~~l~~~~~~~~~~--~~~~-----------~ 169 (649)
.++|||.|+||||..+-+. +..++-. -|. ...+......+..+. +..+ +
T Consensus 72 ~~~P~~~vlGNHD~~~~~~--aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~ 149 (342)
T 3tgh_A 72 MYMPFFTVLGTRDWTGNYN--AQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKD 149 (342)
T ss_dssp TCSEEEECCCHHHHTSCHH--HHHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------CEE
T ss_pred hCCCEEEeCCCCccCCCch--HhhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCC
Confidence 2579999999999875211 1111111 000 001111112221111 1211 1
Q ss_pred eeEEEEEecCCCccCCCCCCC-CCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCC----chhHHHHHH
Q 006340 170 EKHLFVGFDSTMSVGLRGPTN-LFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSH----SGRSLQDIF 244 (649)
Q Consensus 170 g~~~fIglD~~~~pG~~~p~~-~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~----~~~~l~~ll 244 (649)
..++||.+|+...-+. .|+. ..+...++|++||+++|++ ..++|+++|+|+....... ..+.|.++|
T Consensus 150 ~~v~fi~LDT~~l~~~-~~~~~~~~~~~~~Ql~WLe~~L~~-------~~~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll 221 (342)
T 3tgh_A 150 LAAAFIFIDTWVLSSN-FPYKKIHEKAWNDLKSQLSVAKKI-------ADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLL 221 (342)
T ss_dssp EEEEEEECCTTTTSTT-CSCHHHHHHHHHHHHHHHHHHHHH-------CSEEEEECSSCSSCSSTTCCCHHHHHHTHHHH
T ss_pred ceEEEEEEeCcccccC-CcccccchHHHHHHHHHHHHhhcc-------CCcEEEEECCCCCCCCCCCCcHHHHHHHHHHH
Confidence 2689999998754321 1110 0112346899999999953 1499999999987532211 135788999
Q ss_pred HhCCceEEEeCcccCCCCCccceeeeccccccccccccCCccccccCCcccccCCCCCCCccceeeecccccccceEEEE
Q 006340 245 LKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWRKSRAMRILA 324 (649)
Q Consensus 245 ~~~~v~l~L~GHtH~~~g~~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g~~ele~~dw~~~r~yrvl~ 324 (649)
.+++|+++||||.|..+.......+....|..++.+... ... ....... ....+|.++.
T Consensus 222 ~~~~VdlvlsGH~H~~~~~~~~g~~~iv~Ga~g~~~~~~----------------~~~-~~~s~f~----~~~~Gf~~l~ 280 (342)
T 3tgh_A 222 KDAEVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQGKS----------------GMK-NSKSLFF----SSDIGFCVHE 280 (342)
T ss_dssp HHTTCCEEEECSSSSEEEEEETTEEEEEECCSSCCCCCC----------------SSC-CTTEEEE----ECSSEEEEEE
T ss_pred HHcCCCEEEECCCcceeEEeeCCcEEEEeCccccccccC----------------CCC-CCcceee----cCCCcEEEEE
Confidence 999999999999998863111111111111111111100 000 0000010 2568999999
Q ss_pred EcCCEEEEEEEe
Q 006340 325 IDRGHISYVDID 336 (649)
Q Consensus 325 iD~~~~sf~d~~ 336 (649)
++++.+.++.++
T Consensus 281 v~~~~l~~~~~~ 292 (342)
T 3tgh_A 281 LSNNGIVTKFVS 292 (342)
T ss_dssp EETTEEEEEEEE
T ss_pred EECCEEEEEEEE
Confidence 999999887666
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.9e-15 Score=151.84 Aligned_cols=190 Identities=10% Similarity=0.070 Sum_probs=104.1
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhh----------hhhhhHHH-----HH
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLT----------MKQNEVEW-----ME 104 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~----------s~Q~e~eW-----~~ 104 (649)
.|||+++||+|.+. ..+++++ +.++..+||+|+++||+++.+...... ..+..+|+ +.
T Consensus 5 ~mri~~iSDlH~~~------~~~~~~l-~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 77 (260)
T 2yvt_A 5 PRKVLAIKNFKERF------DLLPKLK-GVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIET 77 (260)
T ss_dssp CCEEEEEECCTTCG------GGHHHHH-HHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCCh------HHHHHHH-HHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHH
Confidence 48999999999874 2467777 445567999999999999976431000 00000111 33
Q ss_pred HHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccC
Q 006340 105 YQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVG 184 (649)
Q Consensus 105 Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG 184 (649)
+.++++.+.+ . +.|++.|+||||..... ...+.+.+..... ......+...+..+ ++.|++++... +.
T Consensus 78 ~~~~l~~l~~---~-~~pv~~v~GNHD~~~~~---~~~~~~~~~~~~~--~~~~l~~~~~~~~~--~~~i~g~~~~~-~~ 145 (260)
T 2yvt_A 78 LDKFFREIGE---L-GVKTFVVPGKNDAPLKI---FLRAAYEAETAYP--NIRVLHEGFAGWRG--EFEVIGFGGLL-TE 145 (260)
T ss_dssp HHHHHHHHHT---T-CSEEEEECCTTSCCHHH---HHHHHHHTTTTCT--TEEECSSEEEEETT--TEEEEEECSEE-ES
T ss_pred HHHHHHHHHh---c-CCcEEEEcCCCCchhhh---hHHHHhhhccCCc--ceEEecCcceEEEC--CEEEEecCCCc-CC
Confidence 5566776654 2 36999999999986310 0001111100000 00011111224443 48899987543 11
Q ss_pred CCCCCCCCCCCCHHHHH----HHH-HHHhcccccCCCCceEEEEEecCCCcc---C-----CCCchhHHHHHHHhCCceE
Q 006340 185 LRGPTNLFGHPADQLLT----EID-SELSQWNSQSTKPVTKITFGHFPVSFS---A-----SSHSGRSLQDIFLKHSLSA 251 (649)
Q Consensus 185 ~~~p~~~~G~l~~~qL~----wL~-~~L~~~~~~~~~~~~~Ilf~H~P~~~~---~-----~~~~~~~l~~ll~~~~v~l 251 (649)
+ .++++++. |+. +.|+...+ . .+...|+++|+|+... . ...+...+.++++++++++
T Consensus 146 ~--------~~~~~~~~~~~~~~~~~~l~~l~~-~-~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~ 215 (260)
T 2yvt_A 146 H--------EFEEDFVLKYPRWYVEYILKFVNE-L-KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEV 215 (260)
T ss_dssp S--------CCBSSSSCEEEHHHHHHHGGGGGG-S-CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSE
T ss_pred C--------CcCHHHHhhcchhhHHHHHHHHHh-c-CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCE
Confidence 1 12222222 332 12222221 1 1246799999986421 0 1123357889998889999
Q ss_pred EEeCccc
Q 006340 252 YLCGHLH 258 (649)
Q Consensus 252 ~L~GHtH 258 (649)
++|||+|
T Consensus 216 vl~GH~H 222 (260)
T 2yvt_A 216 AIVGHVG 222 (260)
T ss_dssp EEECSSC
T ss_pred EEECCcc
Confidence 9999999
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-15 Score=147.15 Aligned_cols=175 Identities=10% Similarity=0.065 Sum_probs=103.0
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
.|||+++||+|.+. ..+++++ +.+++.+||+|+++||+++.+... +.+.++++.+.+.
T Consensus 5 ~mri~~iSD~H~~~------~~~~~~~-~~~~~~~~D~vi~~GDl~~~~~~~-----------~~~~~~~~~l~~~---- 62 (228)
T 1uf3_A 5 VRYILATSNPMGDL------EALEKFV-KLAPDTGADAIALIGNLMPKAAKS-----------RDYAAFFRILSEA---- 62 (228)
T ss_dssp CCEEEEEECCTTCH------HHHHHHH-THHHHHTCSEEEEESCSSCTTCCH-----------HHHHHHHHHHGGG----
T ss_pred eEEEEEEeeccCCH------HHHHHHH-HHHhhcCCCEEEECCCCCCCCCCH-----------HHHHHHHHHHHhc----
Confidence 48999999999863 3466776 445556899999999999977432 1244566666542
Q ss_pred CceEEEecCCCCCCCCCCCCCchhhhcccccccc-c-CCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCH
Q 006340 120 KSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQ-L-GRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPAD 197 (649)
Q Consensus 120 ~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~-l-~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~ 197 (649)
+.|++.|+||||.... +++.+...... . +.....+ ..+..+ +++.+++++... +. |+ .+++
T Consensus 63 ~~pv~~v~GNHD~~~~-------~~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~~i~g~~~~~-~~---~~----~~~~ 125 (228)
T 1uf3_A 63 HLPTAYVPGPQDAPIW-------EYLREAANVELVHPEMRNVHE-TFTFWR-GPYLVAGVGGEI-AD---EG----EPEE 125 (228)
T ss_dssp CSCEEEECCTTSCSHH-------HHHHHHHHHHHHCTTEEECBT-SEEEET-TTEEEEEECSEE-ES---SS----CCBS
T ss_pred CCcEEEECCCCCchhH-------HHHHhhhhhhccCcceEEccc-ceEeeC-CCcEEecCCCCc-CC---CC----ccCh
Confidence 3599999999998531 12211100000 0 0000111 112233 258888887543 11 11 2222
Q ss_pred HHH--------HHHHHHHhcccccCCCCceEEEEEecCCCccC-CCCchhHHHHHHHhCCceEEEeCccc
Q 006340 198 QLL--------TEIDSELSQWNSQSTKPVTKITFGHFPVSFSA-SSHSGRSLQDIFLKHSLSAYLCGHLH 258 (649)
Q Consensus 198 ~qL--------~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~-~~~~~~~l~~ll~~~~v~l~L~GHtH 258 (649)
+++ +++++.|++.+ +.+.|+++|+|+.... ...+.+.+.++++++++++++|||+|
T Consensus 126 ~~~~~~~~~~~~~~~~~l~~~~-----~~~~il~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 126 HEALRYPAWVAEYRLKALWELK-----DYPKIFLFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp SSSCEEEHHHHHHHHGGGGGSC-----SCCEEEEESSCBCBTTTBTTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hhcccchhhhHHHHHHHHHhCC-----CCCeEEEEccCcccCCccccCHHHHHHHHHHhCCCEEEEcccc
Confidence 332 23334444332 2478999999875321 11234578888888899999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-15 Score=156.12 Aligned_cols=196 Identities=16% Similarity=0.159 Sum_probs=103.3
Q ss_pred CceEEEEEcCCCCC----CCC--CCc----HHHHHHHHHHHHhccCCcEEEEcCC-CCCCCCcchhhhhhhhHHHHHHHH
Q 006340 39 HVIWAVQLSDLHFS----VHH--PDR----ASDFKRIVGPALSMISPSLVLITGD-LTDGKSKDLLTMKQNEVEWMEYQN 107 (649)
Q Consensus 39 ~~~~fv~ISDlHls----~~~--~~~----~~~l~~~i~~~l~~~kPD~VIitGD-Ltd~~~~~~~~s~Q~e~eW~~Y~~ 107 (649)
+.|||+|+||+|++ ... ..+ ...+++++ +.+++.+||+|+++|| ++|....... ..+.+.+
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv-~~~~~~~~D~vliaGD~l~d~~~~~~~-------~~~~~~~ 88 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVV-EEAEKREVDLILLTGDLLHSRNNPSVV-------ALHDLLD 88 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHH-HHHHHHTCSEEEEESCSBSCSSCCCHH-------HHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHH-HHHHHhCCCEEEECCccccCCCCCCHH-------HHHHHHH
Confidence 56999999999998 321 122 23355665 4455679999999999 9997765321 1233456
Q ss_pred HHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc-----cccCCCCccceEEEEeCCeeEEEEEecCCCc
Q 006340 108 VMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN-----GQLGRKQNVNSVTVQIGDEKHLFVGFDSTMS 182 (649)
Q Consensus 108 vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~-----~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~ 182 (649)
.++++.+. .|++.|+||||... . +.+..+... .-++.... .......++++.+++++...
T Consensus 89 ~l~~L~~~-----~pv~~i~GNHD~~~-~------~~~~~~l~~~g~nv~v~~~~~~--~~~~~~~~~~v~i~glp~~~- 153 (336)
T 2q8u_A 89 YLKRMMRT-----APVVVLPGNHDWKG-L------KLFGNFVTSISSDITFVMSFEP--VDVEAKRGQKVRILPFPYPD- 153 (336)
T ss_dssp HHHHHHHH-----SCEEECCC-------C------HHHHHHHHHHCSSEEECCSSSC--EEEECTTSCEEEEEEECCC--
T ss_pred HHHHHHhc-----CCEEEECCCCCccc-c------ccHHHHHHhcCCEEEEEecccc--cCceEEeCCCEEEEECCCCC-
Confidence 67776542 49999999999863 1 122221100 00010000 00122334678898886432
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchh-----HHHHHHHhCCceEEEeCcc
Q 006340 183 VGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGR-----SLQDIFLKHSLSAYLCGHL 257 (649)
Q Consensus 183 pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~-----~l~~ll~~~~v~l~L~GHt 257 (649)
++. .....+...+++++|+.+.|...-. .++.+.|+++|.|.......++.. .+...+.+.+++++++||+
T Consensus 154 ~~~--~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~ 229 (336)
T 2q8u_A 154 ESE--ALRKNEGDFRFFLESRLNKLYEEAL--KKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHI 229 (336)
T ss_dssp --------CCSSHHHHHHHHHHHHHHHHHH--TCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESC
T ss_pred HHH--HHHHhhHHHHHHHHHHHHHHHHhcc--CCCCCEEEEECccccCCCCCCCccchhhcccCHHHccccCCEEEEccc
Confidence 110 0011233335678888777753200 123589999999875311110000 1111233457999999999
Q ss_pred cCCC
Q 006340 258 HTRF 261 (649)
Q Consensus 258 H~~~ 261 (649)
|..+
T Consensus 230 H~~~ 233 (336)
T 2q8u_A 230 HSFR 233 (336)
T ss_dssp SSCE
T ss_pred cCce
Confidence 9876
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-13 Score=149.65 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=101.1
Q ss_pred CCCCC--CceEEEEEcCCCCCCCCC---Cc----HHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHH
Q 006340 34 REGPE--HVIWAVQLSDLHFSVHHP---DR----ASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWME 104 (649)
Q Consensus 34 ~~~p~--~~~~fv~ISDlHls~~~~---~~----~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~ 104 (649)
++.|. ..|||+|+||+|++.... .+ ...+++++ +.++..+||+||++||++|...... .+++.
T Consensus 12 ~~~~~~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v-~~~~~~~~D~VliaGDl~d~~~p~~-------~~~~~ 83 (386)
T 3av0_A 12 SGLVPRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCI-KKILEIKPDVVLHSGDLFNDLRPPV-------KALRI 83 (386)
T ss_dssp ------CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHH-HHHHTTCCSEEEECSCSBSSSSCCH-------HHHHH
T ss_pred cccccCCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHH-HHHHHcCCCEEEECCCCCCCCCCCH-------HHHHH
Confidence 44444 359999999999986321 11 12466666 4455789999999999999876432 12334
Q ss_pred HHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccC
Q 006340 105 YQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVG 184 (649)
Q Consensus 105 Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG 184 (649)
+.+.++++.+ .+.|++.|+||||...........+.+... ...+ .+......+++++.+++++....
T Consensus 84 ~~~~l~~L~~----~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~--v~~l-----~~~~v~~~~~~~v~i~gl~~~~~-- 150 (386)
T 3av0_A 84 AMQAFKKLHE----NNIKVYIVAGNHEMPRRLGEESPLALLKDY--VKIL-----DGKDVINVNGEEIFICGTYYHKK-- 150 (386)
T ss_dssp HHHHHHHHHH----TTCEEEECCCGGGSCSSTTSCCGGGGGTTT--CEEC-----SEEEEEEETTEEEEEEEECCCCS--
T ss_pred HHHHHHHHHh----cCCcEEEEcCCCCCCccccccCHHHHHHHH--eEEc-----CCCcEEEeCCCCEEEEeCCCCCH--
Confidence 5566666654 136999999999986421110111112111 0001 11112224556788999875421
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 185 LRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 185 ~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
...++..++|+..-.+.. .+.+.|+++|.|............+.. +. +++++++||+|..+
T Consensus 151 ---------~~~~~~~~~l~~l~~~~~----~~~~~Ill~H~~~~~~~~~~~~~~~~~-l~--~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 151 ---------SKREEMLDKLKNFESEAK----NYKKKILMLHQGINPYIPLDYELEHFD-LP--KFSYYALGHIHKRI 211 (386)
T ss_dssp ---------TTHHHHHHHHHHHHHHHH----TCSSEEEEECCCCTTTSSSSCSSCGGG-SC--CCSEEEECSCCSCE
T ss_pred ---------HHHHHHHHHHHHhhhhcc----cCCCEEEEECcCccccCCCCcccCHHH-hh--hCCeEEccCCCCCc
Confidence 111222333322111111 124789999998642111000001111 11 38999999999763
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=149.67 Aligned_cols=196 Identities=18% Similarity=0.246 Sum_probs=106.0
Q ss_pred eEEEEEcCCCCCCC----CC--CcHHHHHHHHH---HHHhccCCcEEEEcCCCC-CCCCcchhhhhhhhHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVH----HP--DRASDFKRIVG---PALSMISPSLVLITGDLT-DGKSKDLLTMKQNEVEWMEYQNVMQ 110 (649)
Q Consensus 41 ~~fv~ISDlHls~~----~~--~~~~~l~~~i~---~~l~~~kPD~VIitGDLt-d~~~~~~~~s~Q~e~eW~~Y~~vl~ 110 (649)
|||+|+||+|++.. .. .+..++.+++. +.++..+||+|+++||++ |...... ..++.+.+.++
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~-------~~~~~~~~~l~ 73 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSV-------VALHDLLDYLK 73 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCH-------HHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCH-------HHHHHHHHHHH
Confidence 69999999999875 21 22333333332 334567999999999999 6554432 22445667777
Q ss_pred HHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhccccc--ccccCCCCccceEEEEeCCe-eEEEEEecCCCccCCCC
Q 006340 111 DVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSI--NGQLGRKQNVNSVTVQIGDE-KHLFVGFDSTMSVGLRG 187 (649)
Q Consensus 111 ~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~--~~~l~~~~~~~~~~~~~~~g-~~~fIglD~~~~pG~~~ 187 (649)
++.+. +|++.|+||||..+. ..+..... ............+.+....| ++.+.++.-.. + .
T Consensus 74 ~l~~~-----~~v~~i~GNHD~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~-~--~- 137 (379)
T 3tho_B 74 RMMRT-----APVVVLPGNQDWKGL-------KLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPD-E--S- 137 (379)
T ss_dssp HHHHH-----SCEEECCCTTSCTTH-------HHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCC-C--C-
T ss_pred HHHhC-----CCEEEEcCCCccccC-------ccccccccccCCcceeecccceEEEEcCCCCEEEEEECCCCC-H--H-
Confidence 77652 499999999996531 11111100 00000000111334443333 67787773221 1 1
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccccc-CCCCceEEEEEecCCCccCC-CCch----hHHHHHHHhCCceEEEeCcccCCC
Q 006340 188 PTNLFGHPADQLLTEIDSELSQWNSQ-STKPVTKITFGHFPVSFSAS-SHSG----RSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 188 p~~~~G~l~~~qL~wL~~~L~~~~~~-~~~~~~~Ilf~H~P~~~~~~-~~~~----~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
.....+..++.+|+.+.+++.-.. ..+....|+++|.++..... .++. ..+...+.+.+++++++||+|..+
T Consensus 138 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q 215 (379)
T 3tho_B 138 --EALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFR 215 (379)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCE
T ss_pred --HHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCe
Confidence 111124456788888877621100 01235889999988653211 1110 012112223568999999999875
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=3.7e-12 Score=138.49 Aligned_cols=247 Identities=17% Similarity=0.170 Sum_probs=124.9
Q ss_pred CceEEEEEcCCCCCCCCC------CcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHP------DRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
+.|+|+|+||+|++.... +....|++++ +.+++.+||+|+++|||+|....+..... .+++.|
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv-~~~~~~~~D~VliaGDLfd~~~p~~~~~~----------~~~~~l 80 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEIL-EIARERDVDMILLGGDIFHDNKPSRKALY----------QALRSL 80 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHH-HHHHHTTCSEEEECSCCBSSSSCCHHHHH----------HHHHHH
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHH-HHHHhcCCCEEEEcCccccCCCCCHHHHH----------HHHHHH
Confidence 569999999999986531 1234577777 55667899999999999998876532211 223332
Q ss_pred HH------------hc------------CC--------CCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCC--
Q 006340 113 IK------------RS------------GL--------EKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQ-- 158 (649)
Q Consensus 113 ~~------------~~------------~l--------~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~-- 158 (649)
++ ++ .+ .++|+|.|.||||......+.+..+.+.......-++...
T Consensus 81 r~~~~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~~~ 160 (417)
T 4fbw_A 81 RLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPEN 160 (417)
T ss_dssp HHHHBSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC--
T ss_pred HHhcccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcccC
Confidence 22 10 00 2679999999999853211111122221100000001000
Q ss_pred ---ccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHH-HHHH-HHhccccc-CCCCceEEEEEecCCCccC
Q 006340 159 ---NVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLT-EIDS-ELSQWNSQ-STKPVTKITFGHFPVSFSA 232 (649)
Q Consensus 159 ---~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~-wL~~-~L~~~~~~-~~~~~~~Ilf~H~P~~~~~ 232 (649)
...+..+..+..++.+.|+. ++.++.+. .+.+ .++..+.. ...+...|++.|.......
T Consensus 161 ~~i~~~pv~l~~g~~~valyG~~---------------~~~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~ 225 (417)
T 4fbw_A 161 DNIVVSPILLQKGFTKLALYGIS---------------NVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHT 225 (417)
T ss_dssp -CEEECCEEEEETTEEEEEEEEC---------------CCCHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSS
T ss_pred CceeEEeEEEEecCceEEEEecc---------------CCchhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCC
Confidence 00123455555667776662 33444432 2221 11111110 1234689999998765321
Q ss_pred CCCchhHHHHHHHhCCceEEEeCcccCCCCCccceeeeccccccccccccCCccccccCCcccccCCCCCCCccceeeec
Q 006340 233 SSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMG 312 (649)
Q Consensus 233 ~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g~~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g~~ele~~ 312 (649)
. .+. +-.-+.+.+++++++||+|..+.. ...... ++ ...+.+|.+....+-+-|.
T Consensus 226 ~-~~y--ip~~l~~~~~DyvalGH~H~~~~~---~~~~~~----------~g--------~~i~~PGS~~~~s~~e~E~- 280 (417)
T 4fbw_A 226 P-TSY--LPESFIQDFYDFVLWGHEHECLID---GSYNPT----------QK--------FTVVQPGSTIATSLSPGET- 280 (417)
T ss_dssp S-SSS--CCGGGSCTTCSEEEEESCCSCEEE---EEEETT----------TT--------EEEEECCCSSCSSCCHHHH-
T ss_pred C-ccc--CchhHhhcCCCEEEecCcccccee---ccccCC----------CC--------EEEEECCCCCcCCCccccC-
Confidence 1 110 001144457999999999987531 000000 00 0011111110011111111
Q ss_pred ccccccceEEEEEcCCEEEEEEEeecc
Q 006340 313 DWRKSRAMRILAIDRGHISYVDIDFKS 339 (649)
Q Consensus 313 dw~~~r~yrvl~iD~~~~sf~d~~~~~ 339 (649)
..++|.++.++++.+....+.+..
T Consensus 281 ---~~kg~~lvei~~~~~~~e~i~l~~ 304 (417)
T 4fbw_A 281 ---APKHCGILNITGKDFHLEKIRLRT 304 (417)
T ss_dssp ---SCCEEEEEEEETTEEEEEEEECSS
T ss_pred ---CCCEEEEEEEECCEEEEEEEECCC
Confidence 367999999999999887777764
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.2e-12 Score=137.22 Aligned_cols=250 Identities=16% Similarity=0.172 Sum_probs=126.7
Q ss_pred CceEEEEEcCCCCCCCCCC------cHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHPD------RASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~------~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
+.|||+|+||+|++..... ....|++++ +.+++.+||+|+++|||+|........ ...+.+.++++
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll-~~~~~~~~D~VliaGDlfd~~~~~~~~-------~~~~~~~L~r~ 102 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEIL-RLAQENEVDFILLGGDLFHENKPSRKT-------LHTCLELLRKY 102 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHH-HHHHHTTCSEEEECSCCBSSSSCCHHH-------HHHHHHHHHHH
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHH-HHHhhcCCCEEEEcCccccCCCCCHHH-------HHHHHHHHHHH
Confidence 5699999999999876422 123567776 556678999999999999988754321 22233444443
Q ss_pred HH---------hc--------------------CCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCC----CC-
Q 006340 113 IK---------RS--------------------GLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGR----KQ- 158 (649)
Q Consensus 113 ~~---------~~--------------------~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~----~~- 158 (649)
.. .+ .-.++|++.|.||||.......-+..+.+..-....-++. ..
T Consensus 103 ~~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~~~~e~i 182 (431)
T 3t1i_A 103 CMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKI 182 (431)
T ss_dssp HBCSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCCCCSSCE
T ss_pred hccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCcCcccce
Confidence 20 00 0015799999999998631111111122211000000111 00
Q ss_pred ccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHH--Hhccc-ccCCCCceEEEEEecCCCccCCCC
Q 006340 159 NVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSE--LSQWN-SQSTKPVTKITFGHFPVSFSASSH 235 (649)
Q Consensus 159 ~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~--L~~~~-~~~~~~~~~Ilf~H~P~~~~~~~~ 235 (649)
...+..+..++.++.+.|+. ++.++.+..+.++ ++... ....++.+.|++.|.........
T Consensus 183 ~~~Pv~l~~g~~~valyGl~---------------~~~~~~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~- 246 (431)
T 3t1i_A 183 DISPVLLQKGSTKIALYGLG---------------SIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGST- 246 (431)
T ss_dssp EECCEEEEETTEEEEEEEEC---------------CCCHHHHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSS-
T ss_pred eeEEEEEecCCEeEEEEeCC---------------CCCHHHHhhhhccccceeecccccCCCceEEEEECCCccCCCcc-
Confidence 00123444455667777662 3444443332221 11111 00112358999999875321100
Q ss_pred chhHHHHHHHhCCceEEEeCcccCCCCCccceeeeccccccccccccCCccccccCCcccccCCCCCCCccceeeecccc
Q 006340 236 SGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMGDWR 315 (649)
Q Consensus 236 ~~~~l~~ll~~~~v~l~L~GHtH~~~g~~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g~~ele~~dw~ 315 (649)
+ .+-+-+...+++++++||+|..+.. ......+ + ...+.+|.+....+-|-| .
T Consensus 247 ~--~ip~~l~~~~~Dyv~lGH~H~~~~~--~~~~~~~-----------~--------~~i~yPGS~~~~s~~e~E----~ 299 (431)
T 3t1i_A 247 N--FIPEQFLDDFIDLVIWGHEHECKIA--PTKNEQQ-----------L--------FYISQPGSSVVTSLSPGE----A 299 (431)
T ss_dssp S--SCCGGGSCTTCCEEEECSCCSCEEE--EEECTTT-----------C--------CEEEECCCSSCCSCCHHH----H
T ss_pred c--cCCHhHhhCCCCEEEeccccccccc--ccccCCC-----------C--------EEEEeCCCCcccCcCccc----C
Confidence 0 0111133456899999999987521 0000000 0 001111111001111111 1
Q ss_pred cccceEEEEEcCCEEEEEEEeecc
Q 006340 316 KSRAMRILAIDRGHISYVDIDFKS 339 (649)
Q Consensus 316 ~~r~yrvl~iD~~~~sf~d~~~~~ 339 (649)
..++|.++.++++.++.+.+.++.
T Consensus 300 ~~k~~~lvei~~~~~~ve~i~l~~ 323 (431)
T 3t1i_A 300 VKKHVGLLRIKGRKMNMHKIPLHT 323 (431)
T ss_dssp SCCEEEEEEEETTEEEEEEEECSS
T ss_pred CCCEEEEEEEECCEEEEEEEECCC
Confidence 456999999999999888777774
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-11 Score=135.71 Aligned_cols=253 Identities=16% Similarity=0.189 Sum_probs=127.7
Q ss_pred CceEEEEEcCCCCCCCCC------CcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHP------DRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
+.|+|+|+||+|++.... +....|++++ +.++..+||+|+++|||+|......... ..+++.|
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv-~~~~~~~~D~VliaGDLfd~~~ps~~a~----------~~~~~~L 143 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEIL-EIARERDVDMILLGGDIFHDNKPSRKAL----------YQALRSL 143 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHH-HHHHHTTCSEEEECSCSBSSSSCCHHHH----------HHHHHHH
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHH-HHHHhcCCCEEEEcCccccCCCCCHHHH----------HHHHHHH
Confidence 569999999999986531 1234577777 5566789999999999999887653221 1233333
Q ss_pred HH------------hc------------CC--------CCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCC---
Q 006340 113 IK------------RS------------GL--------EKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRK--- 157 (649)
Q Consensus 113 ~~------------~~------------~l--------~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~--- 157 (649)
+. ++ .+ .++|+|.|.||||......+.+..+.+.......-++..
T Consensus 144 r~~~~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~~~ 223 (472)
T 4fbk_A 144 RLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPEN 223 (472)
T ss_dssp HHHHBSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCSCS
T ss_pred HHhcccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcccC
Confidence 22 00 01 167999999999985321111112222110000000110
Q ss_pred C--ccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHHHHH-HHHH-HHhccccc-CCCCceEEEEEecCCCccC
Q 006340 158 Q--NVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLT-EIDS-ELSQWNSQ-STKPVTKITFGHFPVSFSA 232 (649)
Q Consensus 158 ~--~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~-wL~~-~L~~~~~~-~~~~~~~Ilf~H~P~~~~~ 232 (649)
. ...+..+..+..++.+.|+. ++.++.+. .+.+ .++..+.. ...+...|++.|.......
T Consensus 224 d~i~~~pv~l~kg~~~valyGl~---------------y~~d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~ 288 (472)
T 4fbk_A 224 DNIVVSPILLQKGFTKLALYGIS---------------NVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHT 288 (472)
T ss_dssp SSEEECCEEEEETTEEEEEEECC---------------CCCHHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSS
T ss_pred CceeEEEEEEEeCCceEEEEecC---------------CCchhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCC
Confidence 0 00123455555666666652 34444432 2221 11111110 1123578999998754321
Q ss_pred CCCchhHHHHHHHhCCceEEEeCcccCCCCCccceeeeccccccccccccCCccccccCCcccccCCCCCCCccceeeec
Q 006340 233 SSHSGRSLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLGSTKNCSSGAPSIGEFWEWEMG 312 (649)
Q Consensus 233 ~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g~~l~~~h~~~~~~~~G~~~~~~~~~~~~~~~~~cs~~~~~~~g~~ele~~ 312 (649)
.. + .+-.-+...++++++.||+|..+.. ......+ +. ....+|.+....+-+-|.
T Consensus 289 ~~-~--yipe~ll~~g~DyValGH~H~~~~~--~~~~~~~-----------g~--------~ivyPGS~~~~s~~e~E~- 343 (472)
T 4fbk_A 289 PT-S--YLPESFIQDFYDFVLWGHEHECLID--GSYNPTQ-----------KF--------TVVQPGSTIATSLSPGET- 343 (472)
T ss_dssp TT-S--SCCGGGSCTTCSEEEEESCCSCEEE--EEEETTT-----------TE--------EEEECCCSSCSSCCGGGC-
T ss_pred cc-c--cCChhhhhcCCCEEEecCcccceee--ecccCCC-----------Ce--------EEEECCCccccccCccCC-
Confidence 10 0 0001133457999999999987531 0000000 00 011111110011111111
Q ss_pred ccccccceEEEEEcCCEEEEEEEeeccCccceEEe
Q 006340 313 DWRKSRAMRILAIDRGHISYVDIDFKSGFRKTIVV 347 (649)
Q Consensus 313 dw~~~r~yrvl~iD~~~~sf~d~~~~~~~~~p~il 347 (649)
..++|.++.++++.++...+.+.. .+|.+.
T Consensus 344 ---~~kg~~lveI~~~~v~ve~I~L~t--~Rpf~~ 373 (472)
T 4fbk_A 344 ---APKHCGILNITGKDFHLEKIRLRT--VRPFIM 373 (472)
T ss_dssp ---SCCEEEEEEEETTEEEEEEEECSS--SCCEEE
T ss_pred ---CCCEEEEEEEECCEEEEEEEECCC--cccEEE
Confidence 367999999999999888777765 344443
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.7e-11 Score=133.49 Aligned_cols=204 Identities=7% Similarity=-0.076 Sum_probs=116.4
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhh----------hh--hhhHHH-HHH
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLT----------MK--QNEVEW-MEY 105 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~----------s~--Q~e~eW-~~Y 105 (649)
..++|+++||.+.... .. ..+++ +.+.+|||+|++||++......... .. ...++| +.|
T Consensus 115 ~~~rfa~~sc~~~~~g-~~--~~~~~-----ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y 186 (527)
T 2yeq_A 115 PQMTFAFASCQQYEHG-YY--TAYKH-----MAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRH 186 (527)
T ss_dssp CCEEEEEECCCCGGGC-CC--HHHHH-----HTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHH
T ss_pred CCeEEEEEecCCCCCC-cc--HHHHH-----HHhcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHH
Confidence 4699999999986321 11 12222 3346999999999999654321000 00 001122 223
Q ss_pred HHH-----HHHHHHhcCCCCceEEEecCCCCCCCCCCCCCch-------------hhhcccc---cccccC-CCCcc-c-
Q 006340 106 QNV-----MQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSF-------------DFFSKHS---INGQLG-RKQNV-N- 161 (649)
Q Consensus 106 ~~v-----l~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~-------------~~~~~ys---~~~~l~-~~~~~-~- 161 (649)
+.. ++.+.+ ..||+.+.||||..+-+.-+... ..++.|. ...... ..+.. .
T Consensus 187 ~~~~~dp~lq~~~a-----~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~ 261 (527)
T 2yeq_A 187 AQYRSDANLKAAHA-----AFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQL 261 (527)
T ss_dssp HHHHTCHHHHHHHH-----HSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCC
T ss_pred HHHhCCHHHHHHHh-----cCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceE
Confidence 221 333322 35999999999997543211000 0111121 110000 00000 1
Q ss_pred eEEEEeCCee-EEEEEecCCCccCCCCCC------------CCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCC
Q 006340 162 SVTVQIGDEK-HLFVGFDSTMSVGLRGPT------------NLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPV 228 (649)
Q Consensus 162 ~~~~~~~~g~-~~fIglD~~~~pG~~~p~------------~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~ 228 (649)
.+.+.. |+ ++|+.||+..+....... .....+.++|++||+++|++. +..++|+.+|.|+
T Consensus 262 y~sf~~--G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s-----~a~W~Iv~s~~p~ 334 (527)
T 2yeq_A 262 YRHFTY--GNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS-----TAHWNVLAQQIFF 334 (527)
T ss_dssp CEEEEE--TTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC-----CSSEEEEECSSCC
T ss_pred EEEEEc--CCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC-----CCCeEEEEeCCcc
Confidence 234444 55 899999987643211000 012357799999999999863 2469999999998
Q ss_pred CccCC----------------CCchhHHHHHHHhCCc--eEEEeCcccCCCC
Q 006340 229 SFSAS----------------SHSGRSLQDIFLKHSL--SAYLCGHLHTRFG 262 (649)
Q Consensus 229 ~~~~~----------------~~~~~~l~~ll~~~~v--~l~L~GHtH~~~g 262 (649)
..... ...+++|.++|.++++ .++||||.|....
T Consensus 335 ~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~ 386 (527)
T 2yeq_A 335 AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWA 386 (527)
T ss_dssp SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEE
T ss_pred cccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhH
Confidence 74211 1124678999999987 5999999998863
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-12 Score=131.55 Aligned_cols=169 Identities=8% Similarity=-0.033 Sum_probs=92.7
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHh---cc--CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALS---MI--SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIK 114 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~---~~--kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~ 114 (649)
+|++++|||+|.. ...++++++ .++ .. +||+++++||+++.+..... ..+.++++.+
T Consensus 1 mm~i~~isD~H~~------~~~l~~~l~-~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~-----------~~~~l~~l~~ 62 (252)
T 1nnw_A 1 MVYVAVLANIAGN------LPALTAALS-RIEEMREEGYEIEKYYILGNIVGLFPYPKE-----------VIEVIKDLTK 62 (252)
T ss_dssp -CEEEEEECCTTC------HHHHHHHHH-HHHHHHHTTCCEEEEEEESCSSSSSSCHHH-----------HHHHHHHHHH
T ss_pred CcEEEEEeecCCC------HHHHHHHHH-HHHhhhhccCCCCEEEEeCccCCCCCCHHH-----------HHHHHHhhHh
Confidence 3799999999953 245777773 344 44 79999999999997753210 1123444432
Q ss_pred hcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCC
Q 006340 115 RSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGH 194 (649)
Q Consensus 115 ~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~ 194 (649)
..+++.|+||||.... ...... ........ .+.+. +. ..... -..+.
T Consensus 63 -----~~~~~~v~GNhD~~~~-------~~~~~~------~~~~~~~~--~~~~~--~~---~~~~~--------~~~~~ 109 (252)
T 1nnw_A 63 -----KENVKIIRGKYDQIIA-------MSDPHA------TDPGYIDK--LELPG--HV---KKALK--------FTWEK 109 (252)
T ss_dssp -----HSCEEEECCHHHHHHH-------HSCTTC------SSSGGGGG--SSCCH--HH---HHHHH--------HHHHH
T ss_pred -----hcCeeEEecchHHHhh-------cccccc------CCcccccc--hhhhH--HH---HHHHH--------HHHHH
Confidence 1379999999997421 000000 00000000 00000 00 00000 01234
Q ss_pred CCHHHHHHHHHHHhcccccCCCCceEEEEEecCC-Ccc---CC-CCchhHHHHHHHhC-CceEEEeCcccCCC
Q 006340 195 PADQLLTEIDSELSQWNSQSTKPVTKITFGHFPV-SFS---AS-SHSGRSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 195 l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~-~~~---~~-~~~~~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
+++++++||++........ -+...|++.|.+. ... .. ..+.+.+.++++++ ++++++|||+|...
T Consensus 110 l~~~~~~~L~~lp~~~~~~--~~~~~i~~~H~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~ 180 (252)
T 1nnw_A 110 LGHEGREYLRDLPIYLVDK--IGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPV 180 (252)
T ss_dssp HHHHHHHHHHTSCSCEEEE--ETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEE
T ss_pred CCHHHHHHHHhCCceEEEe--eCCcEEEEEcCCCCCCcccccCCCCCHHHHHHHHhcCCCCCEEEECCccccc
Confidence 6678899987633222110 0125788888765 211 11 11235788999888 89999999999765
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-11 Score=118.89 Aligned_cols=68 Identities=19% Similarity=0.151 Sum_probs=43.7
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
++|+++++||+|........ .+.+.+.++..++|+|+++||+++ . ++++.+.+.
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~----~~~l~~~~~~~~~d~ii~~GDl~~---~----------------~~~~~l~~~--- 62 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSL----PAKFKKLLVPGKIQHILCTGNLCT---K----------------ESYDYLKTL--- 62 (192)
T ss_dssp --CEEEEECCCCBTTTCSSC----CHHHHTTCCTTSCSEEEECSCCBS---H----------------HHHHHHHHH---
T ss_pred cceEEEEEecCCCCccchhH----HHHHHHHhccCCCCEEEEcCCCCC---H----------------HHHHHHHhc---
Confidence 46899999999986432111 122224344568999999999996 1 123333332
Q ss_pred CCceEEEecCCCCCC
Q 006340 119 EKSIFYDIRGNHDNF 133 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~ 133 (649)
..|++.|+||||..
T Consensus 63 -~~~~~~v~GNhD~~ 76 (192)
T 1z2w_A 63 -AGDVHIVRGDFDEN 76 (192)
T ss_dssp -CSEEEECCCTTCCC
T ss_pred -CCCEEEEcCCcCcc
Confidence 13899999999975
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=7.7e-11 Score=122.56 Aligned_cols=181 Identities=15% Similarity=0.026 Sum_probs=100.0
Q ss_pred EeCCCCC--CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHH
Q 006340 32 QLREGPE--HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVM 109 (649)
Q Consensus 32 ~~~~~p~--~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl 109 (649)
..++.|. +.+||++|||+|..... + +..++|+||++|||++.+..+ .++.++
T Consensus 49 ~~~~~p~~~~~mri~~iSD~H~~~~~------l--------~i~~~D~vi~aGDl~~~g~~~------------e~~~~~ 102 (296)
T 3rl5_A 49 IPYDTPKPAGHTRFVCISDTRSRTDG------I--------QMPYGDILLHTGDFTELGLPS------------EVKKFN 102 (296)
T ss_dssp CCTTSCCCTTEEEEEEEBCCTTCCTT------C--------CCCSCSEEEECSCCSSSCCHH------------HHHHHH
T ss_pred CCCCCCCCCCCeEEEEEeeCCCCcch------h--------ccCCCCEEEECCcccCCCCHH------------HHHHHH
Confidence 3344444 35999999999987531 1 234799999999999987632 244555
Q ss_pred HHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhccc-------------------cccccc-CCCCccceEEEEeCC
Q 006340 110 QDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKH-------------------SINGQL-GRKQNVNSVTVQIGD 169 (649)
Q Consensus 110 ~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~y-------------------s~~~~l-~~~~~~~~~~~~~~~ 169 (649)
+.+.+ ++..+++.|+||||..- + .+++.+. ...+.+ ....+.+.-.++++
T Consensus 103 ~~L~~---l~~~~v~~V~GNHD~~~----d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~- 172 (296)
T 3rl5_A 103 DWLGN---LPYEYKIVIAGNHELTF----D--KEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVK- 172 (296)
T ss_dssp HHHHT---SCCSEEEECCCTTCGGG----C--HHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEET-
T ss_pred HHHHh---CCCCeEEEEcCCccccc----c--hhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEEC-
Confidence 55544 33347999999999852 1 1111100 000000 00011112334444
Q ss_pred eeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC-------CCchhHHHH
Q 006340 170 EKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS-------SHSGRSLQD 242 (649)
Q Consensus 170 g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~-------~~~~~~l~~ 242 (649)
++.|.|...+...+ ++ .+..++.+++.+...+.+ ....|+++|.|...... ....++|.+
T Consensus 173 -Gl~i~Gsp~tP~~~---~~----~f~~~~~~~~~~~~~~ip-----~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~ 239 (296)
T 3rl5_A 173 -GFRIYGAPWTPWFN---GW----GFNLPRGQSLLDKWNLIP-----EGTDILMTHGPPLGFRDWVPKELQRVGCVELLN 239 (296)
T ss_dssp -TEEEEEECCBCC-----CC----TTBCCTTHHHHHHHTTSC-----TTCSEEEESSCBTTSSCEEGGGTEECSBHHHHH
T ss_pred -CEEEEEecCCCCCC---Cc----CCCcchHHHHHHHHhhCC-----CCCeEEEECCCccccccccccccCcCChHHHHH
Confidence 37788854332211 11 122222223333333332 23579999988764211 112357888
Q ss_pred HH-HhCCceEEEeCcccCCC
Q 006340 243 IF-LKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 243 ll-~~~~v~l~L~GHtH~~~ 261 (649)
.+ ++.+.++++|||+|...
T Consensus 240 ~i~~~~~p~l~v~GH~H~~~ 259 (296)
T 3rl5_A 240 TVQRRVRPKLHVFGGIHEGY 259 (296)
T ss_dssp HHHHTTCCSEEEECSCGGGC
T ss_pred HHHHhcCCCEEEECCccCCC
Confidence 77 57889999999999765
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.2e-11 Score=123.24 Aligned_cols=152 Identities=13% Similarity=0.043 Sum_probs=92.2
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
+.||+++|||+|.. ...+++++ +.+. ++|.++++||+++.+.... ++++.+.+.
T Consensus 2 ~~mri~~isDiHg~------~~~l~~~l-~~~~--~~d~ii~~GDl~~~g~~~~--------------~~~~~l~~~--- 55 (246)
T 3rqz_A 2 NAMRILIISDVHAN------LVALEAVL-SDAG--RVDDIWSLGDIVGYGPRPR--------------ECVELVRVL--- 55 (246)
T ss_dssp CCCCEEEECCCTTC------HHHHHHHH-HHHC--SCSEEEECSCCSSSSSCHH--------------HHHHHHHHH---
T ss_pred CCcEEEEEeecCCC------HHHHHHHH-Hhcc--CCCEEEECCCcCCCCCCHH--------------HHHHHHHhc---
Confidence 45899999999932 34677777 3343 8999999999999876321 244444432
Q ss_pred CCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHH
Q 006340 119 EKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQ 198 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~ 198 (649)
. .++.|+||||....... . . . ...... .... . -....++++
T Consensus 56 ~--~~~~v~GNhD~~~~~~~-------~-~---~--~~~~~~-----------------~~~~-~------~~~~~l~~~ 96 (246)
T 3rqz_A 56 A--PNISVIGNHDWACIGRL-------S-L---D--EFNPVA-----------------RFAS-Y------WTTMQLQAE 96 (246)
T ss_dssp C--SSEECCCHHHHHHTCCC-------C-C---C----CGGG-----------------GCHH-H------HHHHHCCHH
T ss_pred C--CCEEEeCchHHHHhccC-------C-c---c--ccCHHH-----------------HHHH-H------HHHHHcCHH
Confidence 1 35889999997521000 0 0 0 000000 0000 0 011257789
Q ss_pred HHHHHHHHHhcccccCCCCceEEEEEecCCCc-c-CCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 199 LLTEIDSELSQWNSQSTKPVTKITFGHFPVSF-S-ASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 199 qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~-~-~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
+++||++...... . ..+++.|.+... . ....+...+.++++++++++++|||+|...
T Consensus 97 ~~~~L~~lp~~~~----~--~~i~~~Hg~p~~~~~~~~~~~~~~~~~l~~~~~~l~i~GHtH~p~ 155 (246)
T 3rqz_A 97 HLQYLESLPNRMI----D--GDWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVPL 155 (246)
T ss_dssp HHHHHHHCCSEEE----E--TTEEEESSCSSSTTTCCCCSHHHHHHHGGGCCSSEEECCSSSSEE
T ss_pred HHHHHHhCCcEEE----E--CCEEEEECCcCCccccccCChHHHHHHHhccCCCEEEECCcCccc
Confidence 9999987433221 1 247778864432 1 233345678899999999999999999764
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.22 E-value=3.4e-10 Score=112.39 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=44.1
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
|++++|||+|.+..... +.+.+.+.++..++|+|+++||+++ . ++++.+.+. .
T Consensus 26 m~i~~iSD~H~~~~~~~----l~~~l~~~~~~~~~D~vi~~GDl~~---~----------------~~l~~l~~~----~ 78 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKE----LPSNFRELLATDKINYVLCTGNVCS---Q----------------EYVEMLKNI----T 78 (215)
T ss_dssp EEEEEECCCCTTTTCSS----CCGGGHHHHHCTTCCEEEECSCCCC---H----------------HHHHHHHHH----C
T ss_pred cEEEEEecCCCCCChHH----HHHHHHHHHhcCCCCEEEECCCCCC---H----------------HHHHHHHHc----C
Confidence 89999999998753211 1222223334678999999999996 1 123333332 1
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
.|++.|+||||..
T Consensus 79 ~~v~~V~GNHD~~ 91 (215)
T 2a22_A 79 KNVYIVSGDLDSA 91 (215)
T ss_dssp SCEEECCCTTCCS
T ss_pred CCEEEecCCCcCc
Confidence 3899999999985
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.20 E-value=9.4e-11 Score=124.01 Aligned_cols=81 Identities=22% Similarity=0.324 Sum_probs=55.8
Q ss_pred eEEEEEcCCCCCCCC---CCcH----HHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHH---PDRA----SDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 41 ~~fv~ISDlHls~~~---~~~~----~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
|||+|+||+|++... +.+. ..+++++ +.++..+||+|+++||++|...... ..++.+.+.++++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~vl~~GDl~d~~~~~~-------~~~~~~~~~l~~l~ 72 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNAL-EIAVQENVDFILIAGDLFHSSRPSP-------GTLKKAIALLQIPK 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHH-HHHHHTTCSEEEEESCSBSSSSCCH-------HHHHHHHHHHHHHH
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHH-HHHHhcCCCEEEECCCcCCCCCCCH-------HHHHHHHHHHHHHH
Confidence 699999999998642 1122 2345555 4455689999999999999765432 12334455666664
Q ss_pred HhcCCCCceEEEecCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~ 133 (649)
+ .+.|++.|+||||..
T Consensus 73 ~----~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 73 E----HSIPVFAIEGNHDRT 88 (333)
T ss_dssp T----TTCCEEEECCTTTCC
T ss_pred H----CCCcEEEeCCcCCCc
Confidence 3 136999999999986
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1e-10 Score=120.42 Aligned_cols=163 Identities=11% Similarity=0.118 Sum_probs=94.7
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
++.++++|||+|.. ...|++++ +.++..++|.|+++||+++.+.... ++++.+.+ +
T Consensus 10 ~~~~i~~iSDiHg~------~~~l~~vl-~~~~~~~~D~ii~~GDlv~~g~~~~--------------~~~~~l~~---~ 65 (270)
T 3qfm_A 10 DMTKIALLSDIHGN------TTALEAVL-ADARQLGVDEYWLLGDILMPGTGRR--------------RILDLLDQ---L 65 (270)
T ss_dssp -CEEEEEECCCTTC------HHHHHHHH-HHHHHTTCCEEEECSCCSSSSSCSH--------------HHHHHHHT---S
T ss_pred cccEEEEEecCCCC------HHHHHHHH-HHHHhcCCCEEEEcCCCCCCCCCHH--------------HHHHHHHc---c
Confidence 46899999999943 35678887 4456678999999999999876421 35555543 2
Q ss_pred CCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHH
Q 006340 119 EKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQ 198 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~ 198 (649)
.|++.|+||||..-. +... ...+........ . . ....+ ....++++
T Consensus 66 --~~~~~v~GNhD~~~~-------~~~~-----~~~~~~~~~~~~-~----~-------~~~~~--------~~~~L~~~ 111 (270)
T 3qfm_A 66 --PITARVLGNWEDSLW-------HGVR-----KELDSTRPSQRY-L----L-------RQCQY--------VLEEISLE 111 (270)
T ss_dssp --CEEEECCCHHHHHHH-------HHHT-----TCSCTTSHHHHH-H----H-------HHHHH--------HHTTSCHH
T ss_pred --CCEEEEcCChHHHHH-------Hhhc-----cccCCCcHHHHH-H----H-------HHHHH--------HHHHcCHH
Confidence 279999999997421 0000 000000000000 0 0 00000 11367889
Q ss_pred HHHHHHHHHhcccccCCCCceEEEEEec-CCCc---cCC-CCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 199 LLTEIDSELSQWNSQSTKPVTKITFGHF-PVSF---SAS-SHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 199 qL~wL~~~L~~~~~~~~~~~~~Ilf~H~-P~~~---~~~-~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
+++||++.-.....+ -....|++.|. |... ... ....+.+.+++++.++++++|||+|...
T Consensus 112 ~~~~L~~LP~~~~~~--~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~ 177 (270)
T 3qfm_A 112 EIEVLHNQPLQIHRQ--FGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQL 177 (270)
T ss_dssp HHHHHHSCCSEEEEE--ETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTTTTTTCSEEECCSSCSEE
T ss_pred HHHHHHhCCCceEEE--ECCcEEEEEECCCCCCCCceecCCCcHHHHHHHhcccCCCEEEECCcCchH
Confidence 999998633322111 01246778885 4321 011 1233467788877889999999999654
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.1e-10 Score=111.93 Aligned_cols=65 Identities=17% Similarity=0.178 Sum_probs=46.8
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
++||++++||+|. +...+++++ +.++..+||+|+++||+++. + .++.+.+ +
T Consensus 24 g~m~i~~iSD~Hg------~~~~l~~~l-~~~~~~~~D~ii~~GDl~~~---~----------------~~~~l~~---l 74 (190)
T 1s3l_A 24 GHMKIGIMSDTHD------HLPNIRKAI-EIFNDENVETVIHCGDFVSL---F----------------VIKEFEN---L 74 (190)
T ss_dssp --CEEEEECCCTT------CHHHHHHHH-HHHHHSCCSEEEECSCCCST---H----------------HHHHGGG---C
T ss_pred CCeEEEEEeeCCC------CHHHHHHHH-HHHhhcCCCEEEECCCCCCH---H----------------HHHHHHh---c
Confidence 3599999999993 234677887 44666789999999999862 1 2333332 2
Q ss_pred CCceEEEecCCCCCC
Q 006340 119 EKSIFYDIRGNHDNF 133 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~ 133 (649)
+.|++.|+||||..
T Consensus 75 -~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 75 -NANIIATYGNNDGE 88 (190)
T ss_dssp -SSEEEEECCTTCCC
T ss_pred -CCCEEEEeCCCcch
Confidence 35999999999985
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.08 E-value=4.5e-10 Score=109.44 Aligned_cols=140 Identities=16% Similarity=0.170 Sum_probs=82.5
Q ss_pred eEEEEEcCCCCCCCCC-------CcHHHHHHHHHHHHhc--cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP-------DRASDFKRIVGPALSM--ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQD 111 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~-------~~~~~l~~~i~~~l~~--~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~ 111 (649)
|++++|||+|++.... +..+.+++++ +.++. .+||+|+++||+++.+ .+. +.+++.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~D~vi~~GDl~~~~-~~~-------------~~~~~~ 66 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVIL-TNLLKVLKPEDTLYHLGDFTWHF-NDK-------------NEYLRI 66 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHH-HHHHTTCCTTCEEEECSCCBSCS-CCT-------------TSHHHH
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCc-hhH-------------HHHHHH
Confidence 6899999999976421 0011234444 44544 4899999999999875 211 122333
Q ss_pred HHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCC
Q 006340 112 VIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNL 191 (649)
Q Consensus 112 L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~ 191 (649)
+.. ++ .|++.|+||||... ..+. . . +. . + +.
T Consensus 67 l~~---l~-~~~~~v~GNhD~~~--------~~~~-----~-----~-~~---------~-----l-----~~------- 97 (195)
T 1xm7_A 67 WKA---LP-GRKILVMGNHDKDK--------ESLK-----E-----Y-FD---------E-----I-----YD------- 97 (195)
T ss_dssp HHH---SS-SEEEEECCTTCCCH--------HHHT-----T-----T-CS---------E-----E-----ES-------
T ss_pred HHH---CC-CCEEEEeCCCCCch--------hhhh-----h-----h-hh---------c-----h-----hH-------
Confidence 333 32 38999999999742 0011 0 0 00 0 0 00
Q ss_pred CCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC---CCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 192 FGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS---SHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 192 ~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~---~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
..+ |++. ....|+++|+|...... ..+.+++.++++++++++++|||+|....
T Consensus 98 --------~~~----l~~~------~~~~i~~~H~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 98 --------FYK----IIEH------KGKRILLSHYPAKDPITERYPDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp --------SEE----EEEE------TTEEEEEESSCSSCSSCCSCHHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred --------HHH----HHhc------CCcEEEEEccCCcCCCcccccchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 001 1111 12678999988653211 11246788999989999999999998864
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.05 E-value=8e-09 Score=98.96 Aligned_cols=41 Identities=24% Similarity=0.125 Sum_probs=30.0
Q ss_pred eEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 219 TKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 219 ~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
..|++.|.|.... ..+.+.+.++++++++++++|||+|...
T Consensus 78 ~~i~~~Hg~~~~~--~~~~~~l~~~~~~~~~d~vi~GHtH~~~ 118 (176)
T 3ck2_A 78 TKIIQTHGHLFDI--NFNFQKLDYWAQEEEAAICLYGHLHVPS 118 (176)
T ss_dssp EEEEEECSGGGTT--TTCSHHHHHHHHHTTCSEEECCSSCCEE
T ss_pred eEEEEECCCccCC--CCCHHHHHHHHHhcCCCEEEECCcCCCC
Confidence 4577888765321 1234578888888899999999999765
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.4e-08 Score=95.23 Aligned_cols=66 Identities=23% Similarity=0.148 Sum_probs=43.3
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
++||++++||+|.... .. .+++.+.+ +. .++|+|+++||+++. ++++.+.+.
T Consensus 21 ~mmri~~iSD~Hg~~~-~~---~l~~~l~~-~~-~~~D~ii~~GD~~~~-------------------~~~~~l~~~--- 72 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVR-MA---SLPDEILN-SL-KEYDGVIGLGDYVDL-------------------DTVILLEKF--- 72 (178)
T ss_dssp -CEEEEEECCCCBTTT-TC---CCCHHHHH-GG-GGCSEEEESSCBSCH-------------------HHHHHHHHH---
T ss_pred cceEEEEEecccCCCC-HH---HHHHHHHH-Hh-cCCCEEEECCCCCCH-------------------HHHHHHHhc---
Confidence 4699999999995222 11 24455533 22 689999999999972 122333322
Q ss_pred CCceEEEecCCCCCC
Q 006340 119 EKSIFYDIRGNHDNF 133 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~ 133 (649)
..|++.|+||||..
T Consensus 73 -~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 73 -SKEFYGVHGNMDYP 86 (178)
T ss_dssp -TSSEEECCCSSSCG
T ss_pred -CCCEEEEECCCCcH
Confidence 13899999999974
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.87 E-value=6.8e-09 Score=117.31 Aligned_cols=192 Identities=15% Similarity=0.094 Sum_probs=100.1
Q ss_pred CceEEEEEcCCCCCCCCC-----------CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHP-----------DRASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEYQ 106 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~-----------~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~ 106 (649)
..++|+|+||+|..-... ....++..++ +.+++.+|| +++.+||+++....... .+ . +
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v-~~~r~~~~~~l~l~~GD~~~gs~~~~~--~~----~---~ 97 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALF-DRVWARAKNPLFLDAGDVFQGTLYFNQ--YR----G---L 97 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHH-HHHHHHSSSEEEEECSCCSSSSHHHHH--HT----T---H
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHH-HHHHhhCCCEEEEeCCCCCCCcHHHHH--hC----C---c
Confidence 459999999999542211 1235677787 445566787 89999999986532110 00 1 1
Q ss_pred HHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccC------C----CCccce-EEEEeCCeeEEEE
Q 006340 107 NVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLG------R----KQNVNS-VTVQIGDEKHLFV 175 (649)
Q Consensus 107 ~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~------~----~~~~~~-~~~~~~~g~~~fI 175 (649)
..++.++. +. +-+.+.||||...- .+...+.+++.. ..-+. . .....+ ..++.++.++.++
T Consensus 98 ~~~~~ln~---lg--~d~~~lGNHEfd~g--~~~l~~~l~~~~-~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgii 169 (552)
T 2z1a_A 98 ADRYFMHR---LR--YRAMALGNHEFDLG--PGPLADFLKGAR-FKVVSANVDASREPRLKGLFAPYAVVVVGGERVGII 169 (552)
T ss_dssp HHHHHHHH---TT--CCEEECCGGGGTTC--HHHHHHHHTTCC-SEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEE
T ss_pred HHHHHHHh---cC--CCccccccccccCC--HHHHHHHHhhCC-CCEEEEEEecCCCcccccccCCeEEEEECCEEEEEE
Confidence 23444443 21 34779999997521 000111111100 00000 0 011222 3556778899999
Q ss_pred EecCCCccCCCCCCCCCC-CCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHh-CCceEEE
Q 006340 176 GFDSTMSVGLRGPTNLFG-HPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLK-HSLSAYL 253 (649)
Q Consensus 176 glD~~~~pG~~~p~~~~G-~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~-~~v~l~L 253 (649)
|+.+...+....|. .+ .+.+ ..+.+++.+++.+++ +...+|++.|.|... + .++.++ .+++++|
T Consensus 170 G~~~~~~~~~~~~~--~~~~~~d-~~~~~~~~v~~l~~~--~~d~iIvL~H~g~~~-----d----~~la~~~~gvDlIl 235 (552)
T 2z1a_A 170 GLTTPDTREISNPG--PTVAFLD-PYESAQKAVYELLAK--GVNKIVVLSHLGYGE-----D----LKLARRLVGVQVIV 235 (552)
T ss_dssp EEECTTHHHHSCCC--TTCEECC-HHHHHHHHHHHHHHT--TCCCEEEEEESCHHH-----H----HHHHTTCSSCCEEE
T ss_pred EecccchhhccCCC--CCcEECC-HHHHHHHHHHHHHhc--CCCEEEEEeCCCcch-----H----HHHHHhCCCccEEE
Confidence 99765432111110 01 1111 122333333333211 235899999988532 1 123333 3699999
Q ss_pred eCcccCCCC
Q 006340 254 CGHLHTRFG 262 (649)
Q Consensus 254 ~GHtH~~~g 262 (649)
+||+|....
T Consensus 236 gGHtH~~~~ 244 (552)
T 2z1a_A 236 GGHSHTLLG 244 (552)
T ss_dssp ECSSCCCBS
T ss_pred eCCcCcccc
Confidence 999998763
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.79 E-value=4.4e-08 Score=109.71 Aligned_cols=200 Identities=14% Similarity=0.090 Sum_probs=99.6
Q ss_pred ceEEEEEcCCCCCCCCCC----cHHHHHHHHHHHHhc----cCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHPD----RASDFKRIVGPALSM----ISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQ 110 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~----~~~~l~~~i~~~l~~----~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~ 110 (649)
.++|+|+||+|....... -...+..++++ +++ .+| ++++.+||+++...... ..+ .+ ..++
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~-~r~~~~~~~~~~lvl~~GD~~~g~~~~~--~~~----~~---~~~~ 77 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDG-IRKEVAAEGGSVLLLSGGDINTGVPESD--LQD----AE---PDFR 77 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHH-HHHHHHHHTCEEEEEECSCCSSSCHHHH--TTT----TH---HHHH
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHH-HHHhhhccCCCEEEEeCCccCCCcchhh--hcC----Cc---HHHH
Confidence 599999999997643211 12345566633 322 246 79999999986543111 000 11 2233
Q ss_pred HHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccc---cccccC--------CCCccce-EEEEeCCeeEEEEEec
Q 006340 111 DVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHS---INGQLG--------RKQNVNS-VTVQIGDEKHLFVGFD 178 (649)
Q Consensus 111 ~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys---~~~~l~--------~~~~~~~-~~~~~~~g~~~fIglD 178 (649)
.++.. . +-+.++||||... +. +.+.+.. ...-+. ....+.+ ..++.++.++.++|+.
T Consensus 78 ~ln~l---g--~d~~~~GNHEfd~-----g~-~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~ 146 (516)
T 1hp1_A 78 GMNLV---G--YDAMAIGNHEFDN-----PL-TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLT 146 (516)
T ss_dssp HHHHH---T--CCEEECCGGGGSS-----CH-HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEE
T ss_pred HHhcc---C--CCEEeeccccccC-----CH-HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEec
Confidence 33332 1 3477999999842 11 1111110 000000 0001122 3556778899999997
Q ss_pred CCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC----CchhHHHHHHHhCCceEEEe
Q 006340 179 STMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS----HSGRSLQDIFLKHSLSAYLC 254 (649)
Q Consensus 179 ~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~----~~~~~l~~ll~~~~v~l~L~ 254 (649)
+...+....|.+..|..-.+..+.+++.+++.+++ .+...+|++.|.|....... .....+.+.+...+++++++
T Consensus 147 ~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~~l~~~-~~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilg 225 (516)
T 1hp1_A 147 TDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT-EKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVG 225 (516)
T ss_dssp CTTTTTSSSCCSCTTEEECCHHHHHHHHHHHHHHH-TCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEEC
T ss_pred ccCcccccCcCccCCcEEeCHHHHHHHHHHHHHhc-CCCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEEC
Confidence 65443222232111211011122333333333211 12358999999987532110 11123444343345999999
Q ss_pred CcccCCC
Q 006340 255 GHLHTRF 261 (649)
Q Consensus 255 GHtH~~~ 261 (649)
||+|...
T Consensus 226 GHtH~~~ 232 (516)
T 1hp1_A 226 GHSQDPV 232 (516)
T ss_dssp CSSCCBC
T ss_pred CCCCccc
Confidence 9999765
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.60 E-value=3.1e-07 Score=103.13 Aligned_cols=207 Identities=12% Similarity=0.063 Sum_probs=102.4
Q ss_pred CceEEEEEcCCCCCCCCC----------CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHP----------DRASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEYQN 107 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~----------~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~ 107 (649)
..++|+|+||+|..-... .-...+..++ +.+++..|+ +++.+||+++.......... ..... +.
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i-~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~-~~~~~---~~ 92 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVI-EQDRRQYDQSFKIDNGDFLQGSPFCNYLIA-HSGSS---QP 92 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHH-HHHHTTSSEEEEEECSCCSSSSHHHHHHHH-TTCSS---HH
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHH-HHHHhcCCCEEEEECCCcCCCcHHHHHHhh-cccCc---ch
Confidence 469999999999543210 1134677787 445566676 77889999986532110000 00000 13
Q ss_pred HHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhccccccccc-------CCCCccc-eEEEEeCCeeEEEEEecC
Q 006340 108 VMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQL-------GRKQNVN-SVTVQIGDEKHLFVGFDS 179 (649)
Q Consensus 108 vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l-------~~~~~~~-~~~~~~~~g~~~fIglD~ 179 (649)
.++.++. +. .-+.++||||...- .+...+.++.. ...-+ +...... ...++.++.++.|||+.+
T Consensus 93 ~~~~ln~---lg--~D~~t~GNHefd~G--~~~l~~~~~~~-~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~ 164 (527)
T 3qfk_A 93 LVDFYNR---MA--FDFGTLGNHEFNYG--LPYLKDTLRRL-NYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTT 164 (527)
T ss_dssp HHHHHHH---TC--CCEECCCGGGGTTC--HHHHHHHHHHC-SSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEEC
T ss_pred HHHHHHh---cC--CcEEeccccccccC--HHHHHHHHHhC-CCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEecc
Confidence 4455544 21 33567999995320 00111111110 00000 0000011 245567888999999976
Q ss_pred CCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC-------CchhHHHHHHHh--CCce
Q 006340 180 TMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS-------HSGRSLQDIFLK--HSLS 250 (649)
Q Consensus 180 ~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~-------~~~~~l~~ll~~--~~v~ 250 (649)
...+....|.+..|..-.+..+.+++.+++.+. +...+|++.|.+....... .......++.++ .+++
T Consensus 165 ~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~~---~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~~~giD 241 (527)
T 3qfk_A 165 QFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKR---HADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDID 241 (527)
T ss_dssp TTGGGTSCHHHHTTEEECCHHHHHHHHHHHHHH---HCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHHGGGCS
T ss_pred CCcccccCccccCCcEEcCHHHHHHHHHHHHHh---CCCEEEEEeCcCcccccccCccccccccchHHHHHHHhcCCCCc
Confidence 544322222111121111233445554444431 2358999999876532100 001112334433 3699
Q ss_pred EEEeCcccCCC
Q 006340 251 AYLCGHLHTRF 261 (649)
Q Consensus 251 l~L~GHtH~~~ 261 (649)
++++||+|...
T Consensus 242 lIlgGHtH~~~ 252 (527)
T 3qfk_A 242 IFITGHQHRQI 252 (527)
T ss_dssp EEECCSSCCEE
T ss_pred EEEECCCCccc
Confidence 99999999775
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.48 E-value=9.1e-07 Score=100.05 Aligned_cols=84 Identities=13% Similarity=0.124 Sum_probs=46.3
Q ss_pred EEEEeCCeeEEEEEecCCCccCCCCCCC----CCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchh
Q 006340 163 VTVQIGDEKHLFVGFDSTMSVGLRGPTN----LFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGR 238 (649)
Q Consensus 163 ~~~~~~~g~~~fIglD~~~~pG~~~p~~----~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~ 238 (649)
..++.++.++.++|+.+...+....+.+ .+.. ..+.++..-++|++ + +...+|++.|.|... +
T Consensus 203 ~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~---~--~~d~iIvLsH~g~~~-----d-- 269 (562)
T 2wdc_A 203 RIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFAL-DERRLQEAVDKARA---E--GANAVVLLSHNGMQL-----D-- 269 (562)
T ss_dssp EEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCC-CHHHHHHHHHHHHH---T--TCSEEEEEECSCHHH-----H--
T ss_pred EEEEECCeEEEEEeeccCcccccccccccCCcEEeC-HHHHHHHHHHHHHH---C--CCCEEEEEeCCCCcc-----h--
Confidence 3456778899999997543321111100 1111 12333333333432 1 235899999988532 1
Q ss_pred HHHHHHHh-CCceEEEeCcccCCC
Q 006340 239 SLQDIFLK-HSLSAYLCGHLHTRF 261 (649)
Q Consensus 239 ~l~~ll~~-~~v~l~L~GHtH~~~ 261 (649)
.++.++ .+++++|+||+|...
T Consensus 270 --~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 270 --AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp --HHHHTTSSSCCEEEECSSCCCC
T ss_pred --HHHHhcCCCCcEEEeCCCCCCC
Confidence 123333 369999999999875
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-06 Score=97.06 Aligned_cols=202 Identities=13% Similarity=0.056 Sum_probs=99.6
Q ss_pred ceEEEEEcCCCCCCCCCC------------cHHHHHHHHHHHHhccCCcEEEE-cCCCCCCCCcchhhhhhhhHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHPD------------RASDFKRIVGPALSMISPSLVLI-TGDLTDGKSKDLLTMKQNEVEWMEYQ 106 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~------------~~~~l~~~i~~~l~~~kPD~VIi-tGDLtd~~~~~~~~s~Q~e~eW~~Y~ 106 (649)
.++|+|+||+|-.-...+ -...+..++ +.+++.+|+.+++ +||+++....... .+ . +
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i-~~~r~~~~~~llldaGD~~~g~~~~~~--~~----g---~ 75 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLV-KQEKAKNKATWFFDAGDYFTGPYISSL--TK----G---K 75 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHH-HHHHHHCSSEEEEECSCCSSSSHHHHT--TT----T---H
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHH-HHHHhcCCCeEEEECCCCCCCchhhhh--cC----C---h
Confidence 489999999994322111 145677777 4466667887777 9999985421110 00 1 1
Q ss_pred HHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcc--c---ccc---cccCCCCccc-eEEEEeCCeeEEEEEe
Q 006340 107 NVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK--H---SIN---GQLGRKQNVN-SVTVQIGDEKHLFVGF 177 (649)
Q Consensus 107 ~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~--y---s~~---~~l~~~~~~~-~~~~~~~~g~~~fIgl 177 (649)
..++.++. +. +-+.++||||...- .+...+.+++ + +.+ ...+...... ...++.++.++.|+|+
T Consensus 76 ~~~~~ln~---lg--~D~~tlGNHEfd~G--~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~ 148 (509)
T 3ive_A 76 AIIDIMNT---MP--FDAVTIGNHEFDHG--WDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGL 148 (509)
T ss_dssp HHHHHHTT---SC--CSEECCCGGGGTTC--HHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEE
T ss_pred HHHHHHHh---cC--CcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEec
Confidence 34444443 21 44667899996421 0011111111 0 000 0000000012 2355678889999999
Q ss_pred cCCC-ccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCc-------hhHHHHHHHhC-C
Q 006340 178 DSTM-SVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHS-------GRSLQDIFLKH-S 248 (649)
Q Consensus 178 D~~~-~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~-------~~~l~~ll~~~-~ 248 (649)
-+.. .+....+.+..|..-.+..+.+++.+++.+. +.+.+|++.|.+......+.. -..-.++.++. +
T Consensus 149 t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~---~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~~g 225 (509)
T 3ive_A 149 HGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKG---KVDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKG 225 (509)
T ss_dssp ECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTT---TCSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSS
T ss_pred ccCcccccccccccCCCCEEcCHHHHHHHHHHHHHh---cCCEEEEEeccCcCCccccccccccccccchHHHHHhcCCC
Confidence 4321 0000000011121112234455555554442 245899999987542111100 01123444443 5
Q ss_pred ceEEEeCcccCCC
Q 006340 249 LSAYLCGHLHTRF 261 (649)
Q Consensus 249 v~l~L~GHtH~~~ 261 (649)
++++++||+|...
T Consensus 226 iDlIlgGHtH~~~ 238 (509)
T 3ive_A 226 LDILITGHAHVGT 238 (509)
T ss_dssp CCEEEEESSCCCC
T ss_pred CcEEEeCCcCccC
Confidence 9999999999764
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=9.3e-07 Score=99.66 Aligned_cols=193 Identities=17% Similarity=0.171 Sum_probs=100.0
Q ss_pred ceEEEEEcCCCCCCCCC--------------CcHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHP--------------DRASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWME 104 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~--------------~~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~ 104 (649)
.++|+|+||+|..-... .-..++..+++ .+++..| ++++.+||+++........ ..+
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~-~~r~~~~~~l~l~~GD~~~g~~~~~~~------~g~- 96 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQ-QIRRAEPNVLLLDAGDQYQGTIWFTVY------KGA- 96 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHH-HHHHHCSSEEEEECSCCSSSSHHHHHH------TTH-
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHH-HHHhhCCCEEEEECCccCCCchhhhhh------CCh-
Confidence 49999999999543211 11356777874 4555556 6999999999876421100 011
Q ss_pred HHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCch-hhhcccc--c-ccccCCCC--------ccc-eEEEEeCCee
Q 006340 105 YQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSF-DFFSKHS--I-NGQLGRKQ--------NVN-SVTVQIGDEK 171 (649)
Q Consensus 105 Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~-~~~~~ys--~-~~~l~~~~--------~~~-~~~~~~~~g~ 171 (649)
..++.++.. + .-+.+.||||...- .+... +++++.. . ........ ... ...++.++.+
T Consensus 97 --~~~~~ln~l-g----~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~k 167 (546)
T 4h2g_A 97 --EVAHFMNAL-R----YDAMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEV 167 (546)
T ss_dssp --HHHHHHHHH-T----CSEEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEE
T ss_pred --HHHHHHHhc-C----CcEEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEE
Confidence 234444432 1 23678999997420 00001 1111100 0 00000000 112 3456678889
Q ss_pred EEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceE
Q 006340 172 HLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSA 251 (649)
Q Consensus 172 ~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l 251 (649)
+.++|+.+...+....|. .+..-.+..+.+++.+++.+.+ ....+|++.|.+... ...+.+-+ .++++
T Consensus 168 IgiiG~~~~~~~~~~~~~--~~~~~~d~~~~~~~~v~~l~~~--g~D~iI~l~H~g~~~------d~~la~~~--~giDl 235 (546)
T 4h2g_A 168 VGIVGYTSKETPFLSNPG--TNLVFEDEITALQPEVDKLKTL--NVNKIIALGHSGFEM------DKLIAQKV--RGVDV 235 (546)
T ss_dssp EEEEEEECTTHHHHSCCC--SSEEECCHHHHHHHHHHHHHHT--TCCCEEEEEESCHHH------HHHHHHHS--TTCCE
T ss_pred EEEEEecccccccccCCC--CCcEEccHHHHHHHHHHHHHhc--CCCEEEEEeccCccc------hHHHHHhC--CCCcE
Confidence 999999764332211111 0110012344455555544422 245899999987532 12232222 35999
Q ss_pred EEeCcccCCC
Q 006340 252 YLCGHLHTRF 261 (649)
Q Consensus 252 ~L~GHtH~~~ 261 (649)
+++||+|...
T Consensus 236 IlgGHtH~~~ 245 (546)
T 4h2g_A 236 VVGGHSNTFL 245 (546)
T ss_dssp EECCSSCCCC
T ss_pred EEeCCcCccc
Confidence 9999999864
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1e-06 Score=100.07 Aligned_cols=188 Identities=15% Similarity=0.094 Sum_probs=97.3
Q ss_pred ceEEEEEcCCCCCCCCCC----------------cHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHH
Q 006340 40 VIWAVQLSDLHFSVHHPD----------------RASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEW 102 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~----------------~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW 102 (649)
.++|+|+||+|- ...+. -..++..+++ .+++..|+ +++..||+++...... ..+ .
T Consensus 12 ~l~Il~tnD~Hg-~~~~~~~~~~~~~~~~~~~~gG~arla~~i~-~~r~~~~~~l~l~~GD~~~gs~~~~--~~~----g 83 (579)
T 3ztv_A 12 ELSILHINDHHS-YLEPHETRINLNGQQTKVDIGGFSAVNAKLN-KLRKKYKNPLVLHAGDAITGTLYFT--LFG----G 83 (579)
T ss_dssp EEEEEEECCCTT-CCSCEEEEEEETTEEEEEEECCHHHHHHHHH-HHHHHSSSEEEEECSCCSCSSHHHH--TTT----T
T ss_pred EEEEEEeCcccc-CccCCccccccCCcccccccCCHHHHHHHHH-HHHhhCCCEEEEeCCCCCCCceeee--ecC----C
Confidence 499999999994 33331 1456777774 45555565 8999999998753211 000 0
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc-------ccc----C--CCCccc-eEEEEeC
Q 006340 103 MEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN-------GQL----G--RKQNVN-SVTVQIG 168 (649)
Q Consensus 103 ~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~-------~~l----~--~~~~~~-~~~~~~~ 168 (649)
+ ..++.|+.. + +-+.+.||||... + .+.+.++... ... + ....+. ...++.+
T Consensus 84 ~---~~~~~ln~l-g----~D~~tlGNHEfd~-----G-~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~ 149 (579)
T 3ztv_A 84 S---ADAAVMNAG-N----FHYFTLGNHEFDA-----G-NEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVD 149 (579)
T ss_dssp H---HHHHHHHHH-T----CSEEECCSGGGTT-----H-HHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEET
T ss_pred H---HHHHHHHhc-C----cCeeecccccccc-----C-HHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEEC
Confidence 1 233334332 1 3356899999642 1 1111111000 000 0 011122 2456678
Q ss_pred CeeEEEEEecC-CCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhC
Q 006340 169 DEKHLFVGFDS-TMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKH 247 (649)
Q Consensus 169 ~g~~~fIglD~-~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~ 247 (649)
+.++.|||+.. ...+....|. .|..-.+..+.+++.+++.+.+ ..+.+|++.|.+... ...+.+-+ .
T Consensus 150 G~kIgviG~t~~~~~~~~~~p~--~~~~f~d~~~~~~~~v~~lk~~--g~d~iI~l~H~G~~~------d~~la~~~--~ 217 (579)
T 3ztv_A 150 GEKIAIIGLDTVNKTVNSSSPG--KDVKFYDEIATAQIMANALKQQ--GINKIILLSHAGSEK------NIEIAQKV--N 217 (579)
T ss_dssp TEEEEEEEEECSHHHHHHSCCC--TTEEECCHHHHHHHHHHHHHTT--TCCCEEEEEETCHHH------HHHHHHHC--S
T ss_pred CEEEEEEEEEcCCccccccCCC--CCceEcCHHHHHHHHHHHHHhC--CCCEEEEEeccCchh------hHHHHHhC--C
Confidence 88999999943 1111111111 1110112344455555554421 235799999977431 12222222 2
Q ss_pred CceEEEeCcccCCC
Q 006340 248 SLSAYLCGHLHTRF 261 (649)
Q Consensus 248 ~v~l~L~GHtH~~~ 261 (649)
+++++++||+|...
T Consensus 218 giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 218 DIDVIVTGDSHYLY 231 (579)
T ss_dssp SCCEEEECSSCCEE
T ss_pred CCCEEEeCCCCccc
Confidence 59999999999875
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.34 E-value=7.4e-07 Score=87.83 Aligned_cols=77 Identities=18% Similarity=0.293 Sum_probs=51.5
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
+|+++++||+|.. ...+++++ +.++..++|+++++||+++.+...... .+ | ..+++++.+.+ +
T Consensus 25 mmki~~iSD~H~~------~~~l~~~l-~~~~~~~~d~vi~~GDl~~~g~~~~~~-~~----~-~~~~~~~~l~~---~- 87 (208)
T 1su1_A 25 MMKLMFASDIHGS------LPATERVL-ELFAQSGAQWLVILGDVLNHGPRNALP-EG----Y-APAKVVERLNE---V- 87 (208)
T ss_dssp CCEEEEECCCTTB------HHHHHHHH-HHHHHHTCSEEEECSCCSCCCTTSCCC-TT----B-CHHHHHHHHHT---T-
T ss_pred cEEEEEEEcCCCC------HHHHHHHH-HHHHhcCCCEEEECCCccccCcccccc-cc----c-CHHHHHHHHHh---c-
Confidence 5899999999964 24677777 445556899999999999876531100 00 0 01234555543 2
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
+.|++.|+||||..
T Consensus 88 ~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 88 AHKVIAVRGNCDSE 101 (208)
T ss_dssp GGGEEECCCTTCCH
T ss_pred CCceEEEECCCchH
Confidence 24899999999974
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.85 E-value=8.5e-06 Score=80.57 Aligned_cols=67 Identities=19% Similarity=0.340 Sum_probs=48.2
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
.+++++|||+|.. ...+++++ +.++. .++|.++++||++|.+.... ++++.+.
T Consensus 12 ~~~i~visDiHg~------~~~l~~~l-~~~~~~~~~d~~i~~GD~~~~g~~~~--------------~~~~~l~----- 65 (221)
T 1g5b_A 12 YRNIWVVGDLHGC------YTNLMNKL-DTIGFDNKKDLLISVGDLVDRGAENV--------------ECLELIT----- 65 (221)
T ss_dssp CSCEEEECCCTTC------HHHHHHHH-HHHTCCTTTCEEEECSCCSSSSSCHH--------------HHHGGGG-----
T ss_pred CceEEEEEcCCCC------HHHHHHHH-HHccCCCCCCEEEEeCCccCCCCChH--------------HHHHHHh-----
Confidence 5899999999932 34677777 33443 47899999999999876431 2344332
Q ss_pred CCceEEEecCCCCCC
Q 006340 119 EKSIFYDIRGNHDNF 133 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~ 133 (649)
..+++.|+||||..
T Consensus 66 -~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 66 -FPWFRAVRGNHEQM 79 (221)
T ss_dssp -STTEEECCCHHHHH
T ss_pred -cCCEEEEccCcHHH
Confidence 23899999999974
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.7e-05 Score=80.84 Aligned_cols=66 Identities=20% Similarity=0.315 Sum_probs=47.3
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
.++++|||+|.. ...|++++ +.++..++ |.++++||++|.+.... ++++.+..
T Consensus 19 ~~i~visDiHg~------~~~l~~~l-~~~~~~~~~d~ii~~GD~vd~g~~~~--------------~~l~~l~~----- 72 (262)
T 2qjc_A 19 GRVIIVGDIHGC------RAQLEDLL-RAVSFKQGSDTLVAVGDLVNKGPDSF--------------GVVRLLKR----- 72 (262)
T ss_dssp SCEEEECCCTTC------HHHHHHHH-HHHTCCTTTSEEEECSCCSSSSSCHH--------------HHHHHHHH-----
T ss_pred CeEEEEeCCCCC------HHHHHHHH-HHHhccCCCCEEEEecCCCCCCCCHH--------------HHHHHHHH-----
Confidence 489999999932 34678887 44555555 99999999999876432 23444432
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
.+++.|+||||..
T Consensus 73 -~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 73 -LGAYSVLGNHDAK 85 (262)
T ss_dssp -HTCEECCCHHHHH
T ss_pred -CCCEEEeCcChHH
Confidence 2689999999974
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00045 Score=77.84 Aligned_cols=197 Identities=15% Similarity=0.088 Sum_probs=93.6
Q ss_pred CceEEEEEcCCCCCCCCC-------Cc---HHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHP-------DR---ASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEYQN 107 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~-------~~---~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~ 107 (649)
..++|+|++|+|..-... .. ...+...+++..++.+|+ +++.+||+++..........+ .+ .
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~----g~---~ 86 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPN----GL---K 86 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSST----TT---T
T ss_pred eEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccC----CH---H
Confidence 469999999999764321 11 233444453322246788 579999999764211100000 00 1
Q ss_pred HHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhh---hccc--ccc-cccC---CCC----ccce-EEEEe--CCee
Q 006340 108 VMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDF---FSKH--SIN-GQLG---RKQ----NVNS-VTVQI--GDEK 171 (649)
Q Consensus 108 vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~---~~~y--s~~-~~l~---~~~----~~~~-~~~~~--~~g~ 171 (649)
.++.++. +. .=+.+.||||...-. ++..++ +.+. ... .... ..+ ...+ ..++. ++.+
T Consensus 87 ~~~~ln~---lg--~Da~tlGNHEfD~G~--~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~k 159 (557)
T 3c9f_A 87 STPIFIK---QD--YDLLTIGNHELYLWE--NSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIR 159 (557)
T ss_dssp THHHHTT---SC--CSEECCCGGGSSSHH--HHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCE
T ss_pred HHHHHHh---cC--CCEEeecchhcccch--HHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEE
Confidence 2333333 21 235688999985310 000111 1111 000 0000 001 1112 35566 7789
Q ss_pred EEEEEecCCCccCCCCCCCCCCCCCHHH-H--HHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHh--
Q 006340 172 HLFVGFDSTMSVGLRGPTNLFGHPADQL-L--TEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLK-- 246 (649)
Q Consensus 172 ~~fIglD~~~~pG~~~p~~~~G~l~~~q-L--~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~-- 246 (649)
+.|||+.+...+. +.+. -..+..+ + +|+++.++ .+.+.+|++.|.+..... .+. ....+.+.+
T Consensus 160 IgiiGlt~~~~~~---~~~~-~~~d~~e~i~~~~v~~l~~------~~~D~IIvL~H~G~~~~~-d~~-~~~~~~lA~~~ 227 (557)
T 3c9f_A 160 VMAFGFLFDFKRF---NSGT-RVTPMAETIHEPWFQEALK------HEVDLIIIVGHTPISHNW-GEF-YQVHQYLRQFF 227 (557)
T ss_dssp EEEEECCCCCCCC---CTTE-EECCHHHHTTSHHHHHHTT------SCCSEEEEECSSCCCTTT-CHH-HHHHHHHHHHC
T ss_pred EEEEEeecCCCCC---CCCc-EECCHHHHHHHHHHHHHHh------cCCCEEEEecccCccccC-ccc-cHHHHHHHHhC
Confidence 9999996543221 1000 0123222 1 24443232 134689999998873100 111 122233333
Q ss_pred CCce-EEEeCcccCCC
Q 006340 247 HSLS-AYLCGHLHTRF 261 (649)
Q Consensus 247 ~~v~-l~L~GHtH~~~ 261 (649)
.+++ ++++||+|...
T Consensus 228 ~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 228 PDTIIQYFGGHSHIRD 243 (557)
T ss_dssp TTSEEEEEECSSCCEE
T ss_pred CCCCEEEECCCCCCCC
Confidence 3689 59999999763
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00021 Score=75.55 Aligned_cols=48 Identities=13% Similarity=0.151 Sum_probs=32.2
Q ss_pred ceEEEEEcCCCCCCCCC----------CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCC
Q 006340 40 VIWAVQLSDLHFSVHHP----------DRASDFKRIVGPALSMISPS-LVLITGDLTDGK 88 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~----------~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~ 88 (649)
.++|+|.+|+|-.-... .-..++..+++ .+++..|+ +++-.||++...
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~-~~r~~~~n~llld~GD~~qGs 66 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIE-QARAEVKNSVLVDNGDVIQGS 66 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHH-HHHHTCSCEEEEECSCCSSSS
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHH-HHHhhCCCEEEEECCCCCCCc
Confidence 38999999999643210 11356777774 45555554 788999999754
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.66 E-value=3e-05 Score=79.93 Aligned_cols=68 Identities=21% Similarity=0.283 Sum_probs=48.1
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
|++++|||+|.. ...|++++ +.+.. .++|.++++||++|.+.... ++++.+.+ ++
T Consensus 1 M~i~vigDiHG~------~~~l~~ll-~~~~~~~~~d~~v~lGD~vdrG~~s~--------------~~l~~l~~---l~ 56 (280)
T 2dfj_A 1 MATYLIGDVHGC------YDELIALL-HKVEFTPGKDTLWLTGDLVARGPGSL--------------DVLRYVKS---LG 56 (280)
T ss_dssp -CEEEECCCCSC------HHHHHHHH-HHTTCCTTTCEEEECSCCSSSSSCHH--------------HHHHHHHH---TG
T ss_pred CeEEEEecCCCC------HHHHHHHH-HHhCCCCCCCEEEEeCCcCCCCCccH--------------HHHHHHHh---CC
Confidence 578999999953 24677777 44443 46899999999999886532 24444443 22
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
.+++.++||||..
T Consensus 57 -~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 57 -DSVRLVLGNHDLH 69 (280)
T ss_dssp -GGEEECCCHHHHH
T ss_pred -CceEEEECCCcHH
Confidence 3799999999974
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0005 Score=72.80 Aligned_cols=206 Identities=15% Similarity=0.194 Sum_probs=94.7
Q ss_pred ceEEEEEcCCCCCCCCC----------CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhh------hHHH
Q 006340 40 VIWAVQLSDLHFSVHHP----------DRASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQN------EVEW 102 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~----------~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~------e~eW 102 (649)
.++|+|.+|+|-.-... .-..++..+++ .+++..|+ +++-.||++............. ..+.
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~-~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~ 89 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQ-KHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKT 89 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHH-HHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHH-HHHhcCCCEEEEecCccCCCcHHHHHhhhcccccccccccc
Confidence 48999999999543210 11356777774 35554554 6788999997553211000000 0000
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcc--ccc-cccc---CCCCccceEEE-Ee-----C--
Q 006340 103 MEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSK--HSI-NGQL---GRKQNVNSVTV-QI-----G-- 168 (649)
Q Consensus 103 ~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~--ys~-~~~l---~~~~~~~~~~~-~~-----~-- 168 (649)
+..++.++. +. .=..+.||||...- .+...+.++. +.. ...+ .....+.+|.+ +. +
T Consensus 90 ---~~~~~~ln~---lg--~Da~tlGNHEfd~G--~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~G~ 159 (341)
T 3gve_A 90 ---HPIISVMNA---LK--YDAGTLGNHEFNYG--LDFLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGN 159 (341)
T ss_dssp ---CHHHHHHHH---TT--CCBEECCGGGGTTC--HHHHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSC
T ss_pred ---cHHHHHHHh---hC--CCeeeccchhhccC--HHHHHHHHHhcCCCEEEEeeECCCCCCccCCeEEEEEeeeccCCC
Confidence 023344433 21 22457899996421 0011111111 000 0000 01111223433 32 2
Q ss_pred --CeeEEEEEecCCCccCCCCCCCCCCCCC-HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC---CCchhHHHH
Q 006340 169 --DEKHLFVGFDSTMSVGLRGPTNLFGHPA-DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS---SHSGRSLQD 242 (649)
Q Consensus 169 --~g~~~fIglD~~~~pG~~~p~~~~G~l~-~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~---~~~~~~l~~ 242 (649)
+-++.|||+-+...+....+ +..|.+. .+..+.+++.+++.+++ ..+.+|++.|........ .++ ...+
T Consensus 160 ~~gvkIgviG~t~~~~~~~~~~-~~~~~~~~~d~~~~~~~~v~~Lk~~--g~D~II~l~H~G~~~d~~~~~~e~--~~~~ 234 (341)
T 3gve_A 160 EQKVKVGYIGFVPPQIMTWDKK-NLEGQVQVQDIVESANETIPKMKAE--GADVIIALAHTGIEKQAQSSGAEN--AVFD 234 (341)
T ss_dssp EEEEEEEEEEECCTTHHHHTHH-HHTTTCEECCHHHHHHHHHHHHHHT--TCSEEEEEECCCCCSSCCCTTCSS--CHHH
T ss_pred cCCeEEEEEEeccCcccccccc-cccCceEEcCHHHHHHHHHHHHHhc--CCCEEEEEeccCccccccccccch--hHHH
Confidence 34889999854322110000 1122111 12233444444444321 246899999976543211 112 1223
Q ss_pred HHHh-CCceEEEeCcccCCC
Q 006340 243 IFLK-HSLSAYLCGHLHTRF 261 (649)
Q Consensus 243 ll~~-~~v~l~L~GHtH~~~ 261 (649)
+.++ .+++++++||+|...
T Consensus 235 lA~~v~giD~IigGHsH~~~ 254 (341)
T 3gve_A 235 LATKTKGIDAIISGHQHGLF 254 (341)
T ss_dssp HHHHCSCCCEEEECSSCCEE
T ss_pred HHhcCCCCcEEEECCCCccC
Confidence 3333 359999999999875
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0019 Score=72.32 Aligned_cols=188 Identities=18% Similarity=0.145 Sum_probs=95.1
Q ss_pred eEEEEEcCCCCCCCC-C-------------CcHHHHHHHHHHHHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHH
Q 006340 41 IWAVQLSDLHFSVHH-P-------------DRASDFKRIVGPALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEY 105 (649)
Q Consensus 41 ~~fv~ISDlHls~~~-~-------------~~~~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y 105 (649)
++|+|++|+|-.-.. + .-..++...++ .+++..|+ +++-.||.+....... ..+ .+
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~-~~r~~~~n~llldaGD~~qGs~~~~--~~~----g~-- 74 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQ-QIRRAEPNVLLLDAGDQYQGTIWFT--VYK----GA-- 74 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHH-HHHHHCSSEEEEECSCCSCSSHHHH--HHT----TH--
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHH-HHHhhCcCeEEEEeCCcccchHHHH--HhC----Ch--
Confidence 789999999953211 0 01456777773 35555555 6778999998754211 111 11
Q ss_pred HHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccc---cc----cccC--------CCCccc-eEEEEeCC
Q 006340 106 QNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHS---IN----GQLG--------RKQNVN-SVTVQIGD 169 (649)
Q Consensus 106 ~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys---~~----~~l~--------~~~~~~-~~~~~~~~ 169 (649)
..++-++. +. .=..++||||... +.....+++. .. .... ....+. ...++.++
T Consensus 75 -~~i~~mN~---lg--yDa~~lGNHEFd~-----G~~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g 143 (530)
T 4h1s_A 75 -EVAHFMNA---LR--YDAMALGNHEFDN-----GVEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGD 143 (530)
T ss_dssp -HHHHHHHH---TT--CCEEECCGGGGTT-----TTHHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETT
T ss_pred -HHHHHHhc---cC--CCEEEEchhhhcc-----CHHHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEecc
Confidence 23333333 21 2356899999743 1111111110 00 0000 011122 24566788
Q ss_pred eeEEEEEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhC-C
Q 006340 170 EKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKH-S 248 (649)
Q Consensus 170 g~~~fIglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~-~ 248 (649)
.++.|||+-+...+....|. .+..-.+..+.+++.+++.+++ +.+.+|+++|.-.. ... .+.++- +
T Consensus 144 ~kIgviGltt~~~~~~~~~~--~~~~f~d~v~~~~~~v~~Lr~~--g~D~II~LsH~G~~------~d~---~la~~v~g 210 (530)
T 4h1s_A 144 EVVGIVGYTSKETPFLSNPG--TNLVFEDEITALQPEVDKLKTL--NVNKIIALGHSGFE------MDK---LIAQKVRG 210 (530)
T ss_dssp EEEEEEEEECTTHHHHSCCC--TTEEECCHHHHHHHHHHHHHHT--TCCCEEEEEESCHH------HHH---HHHHHSTT
T ss_pred EEEeeccccccceeeeccCC--CCcccCcHHHHHHHHHhhhhhc--CCCEEEEeccCCch------HHH---HHHhcCCC
Confidence 89999998654433222221 1111112333444444443321 34589999995431 111 233333 5
Q ss_pred ceEEEeCcccCCC
Q 006340 249 LSAYLCGHLHTRF 261 (649)
Q Consensus 249 v~l~L~GHtH~~~ 261 (649)
+++++.||+|...
T Consensus 211 iD~IlgGHsH~~~ 223 (530)
T 4h1s_A 211 VDVVVGGHSNTFL 223 (530)
T ss_dssp CCEEECCSSCCCB
T ss_pred CCeeccCCcccee
Confidence 9999999999864
|
| >3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00069 Score=58.59 Aligned_cols=70 Identities=16% Similarity=0.094 Sum_probs=54.7
Q ss_pred cEEEEEEeCC-CCeEEEEEEeCCcCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCce
Q 006340 377 TIRALVFSVS-PILSVVAKVYDSRSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLS 455 (649)
Q Consensus 377 ~IrvlvFs~s-~~~~V~v~id~~~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~ 455 (649)
.|.+.++... .|.+|++++||...+. ....-|...|++. .|.| +|+++|+|..|.+.
T Consensus 20 ~i~a~A~D~dg~V~kVef~vdg~~vg~----------------dt~apy~~~w~~~---~G~h---tl~a~AtD~~G~~~ 77 (98)
T 3pe9_A 20 KITATASDSDGKISRVDFLVDGEVIGS----------------DREAPYEYEWKAV---EGNH---EISVIAYDDDDAAS 77 (98)
T ss_dssp EEEEEECCSSSCEEEEEEEETTEEEEE----------------ECSSSEEEEEECC---SEEE---EEEEEEEETTCCBC
T ss_pred EEEEEEEeCCCCEEEEEEEECCEEecc----------------cccCCEEEEEEcC---CccE---EEEEEEEECCCCEE
Confidence 6899999755 4999999999977653 1235589999765 6888 79999999999998
Q ss_pred eeeeeeEEEcCcc
Q 006340 456 SSELRPFSINGLS 468 (649)
Q Consensus 456 ~~~~~~fs~~~~~ 468 (649)
++..-.++|+..+
T Consensus 78 tS~~v~vtV~~~~ 90 (98)
T 3pe9_A 78 TPDSVKIFVKQAR 90 (98)
T ss_dssp CCEEEEEEEECCC
T ss_pred eeeEEEEEECchh
Confidence 7755566666655
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00042 Score=72.31 Aligned_cols=73 Identities=18% Similarity=0.146 Sum_probs=48.5
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
.+++++||+|-. ..+|.+++ +......++.++++||++|.+...... . ..+.++.... .
T Consensus 50 ~~i~viGDIHG~------~~~L~~ll-~~~~~~~~~~~vflGD~VDRG~~s~ev----------l-~lL~~lk~~~---p 108 (309)
T 2ie4_C 50 CPVTVCGDVHGQ------FHDLMELF-RIGGKSPDTNYLFMGDYVDRGYYSVET----------V-TLLVALKVRY---R 108 (309)
T ss_dssp SSEEEECCCTTC------HHHHHHHH-HHHCCTTTSCEEECSCCSSSSTTHHHH----------H-HHHHHHHHHC---T
T ss_pred CCEEEEecCCCC------HHHHHHHH-HHcCCCCCCEEEEeCCccCCCCChHHH----------H-HHHHHHHhhC---C
Confidence 469999999943 34677777 445445668889999999988754211 1 2233332211 1
Q ss_pred ceEEEecCCCCCCC
Q 006340 121 SIFYDIRGNHDNFG 134 (649)
Q Consensus 121 ~p~~~I~GNHD~~~ 134 (649)
..++.++||||...
T Consensus 109 ~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 109 ERITILRGNHESRQ 122 (309)
T ss_dssp TTEEECCCTTSSTT
T ss_pred CcEEEEeCCCCHHH
Confidence 36999999999864
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00044 Score=73.21 Aligned_cols=76 Identities=18% Similarity=0.210 Sum_probs=47.5
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhcc--------CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMI--------SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQD 111 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~--------kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~ 111 (649)
.+++++|||+|.. ...|.+++ +.+... ++|.++++||++|.+...... . ..+.+
T Consensus 70 ~~~i~vigDiHG~------~~~l~~ll-~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~ev----------l-~~l~~ 131 (342)
T 2z72_A 70 IKKVVALSDVHGQ------YDVLLTLL-KKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEV----------L-WFMYQ 131 (342)
T ss_dssp CCEEEEECCCTTC------HHHHHHHH-HHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHH----------H-HHHHH
T ss_pred CCCEEEEECCCCC------HHHHHHHH-HhcCCCcccccccCCCCEEEEECCCcCCCCCHHHH----------H-HHHHH
Confidence 4899999999943 24677777 333221 579999999999988653211 1 22333
Q ss_pred HHHhcCCCCceEEEecCCCCCC
Q 006340 112 VIKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 112 L~~~~~l~~~p~~~I~GNHD~~ 133 (649)
+.........+++.++||||..
T Consensus 132 l~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 132 LDQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHHhhCCCeEEEEecCCcHH
Confidence 3210000123799999999974
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00087 Score=73.84 Aligned_cols=73 Identities=19% Similarity=0.105 Sum_probs=47.1
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccC-CcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMIS-PSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~k-PD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
.++++++||+|-. ..+|.+++ +.+.... .|.++++||++|.+...... . ..+..+...
T Consensus 212 ~~~~~vigDiHG~------~~~l~~~l-~~~~~~~~~~~~v~lGD~vdrG~~s~e~----------~-~~l~~l~~~--- 270 (477)
T 1wao_1 212 TEKITVCGDTHGQ------FYDLLNIF-ELNGLPSETNPYIFNGDFVDRGSFSVEV----------I-LTLFGFKLL--- 270 (477)
T ss_dssp SCEEEEECBCTTC------HHHHHHHH-HHHCCCBTTBCEEEESCCSSSSTTHHHH----------H-HHHHHHHHH---
T ss_pred CcceEEEeCCCCC------HHHHHHHH-HHcCCCCCcCeEEEeccccCCCcchHHH----------H-HHHHHHHhh---
Confidence 5899999999943 34677777 3343332 35699999999988754311 1 122222211
Q ss_pred CCceEEEecCCCCCC
Q 006340 119 EKSIFYDIRGNHDNF 133 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~ 133 (649)
....++.++||||..
T Consensus 271 ~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 271 YPDHFHLLRGNHETD 285 (477)
T ss_dssp STTTEEEECCTTSSH
T ss_pred CCCceEeecCCccHH
Confidence 124799999999974
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00096 Score=69.70 Aligned_cols=73 Identities=18% Similarity=0.100 Sum_probs=46.8
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhcc-CCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMI-SPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGL 118 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~-kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l 118 (649)
.++++++||+|-. ..+|.+++ +..... ..+.++++||++|.+....+. . ..+..++...
T Consensus 59 ~~ri~viGDIHG~------~~~L~~ll-~~~g~~~~~~~~vflGD~VDRG~~s~ev----------l-~lL~~lk~~~-- 118 (315)
T 3h63_A 59 TEKITVCGDTHGQ------FYDLLNIF-ELNGLPSETNPYIFNGDFVDRGSFSVEV----------I-LTLFGFKLLY-- 118 (315)
T ss_dssp TCEEEEECCCTTC------HHHHHHHH-HHHCCCBTTBCEEEESCCSSSSTTHHHH----------H-HHHHHHHHHS--
T ss_pred CceEEEEecCCCC------HHHHHHHH-HHhCCCCCCCEEEEeCCccCCCcChHHH----------H-HHHHHhhhhc--
Confidence 4799999999954 34677777 333222 335699999999998754321 1 2233332211
Q ss_pred CCceEEEecCCCCCC
Q 006340 119 EKSIFYDIRGNHDNF 133 (649)
Q Consensus 119 ~~~p~~~I~GNHD~~ 133 (649)
...++.++||||..
T Consensus 119 -p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 119 -PDHFHLLRGNHETD 132 (315)
T ss_dssp -TTTEEEECCTTSSH
T ss_pred -CCcEEEEecCcccc
Confidence 23689999999975
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00068 Score=71.36 Aligned_cols=72 Identities=22% Similarity=0.195 Sum_probs=47.3
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
.++.++||+|-. ..+|.+++ +.+.....|-++++||++|.+...... . ..+..+.... .
T Consensus 57 ~~i~viGDIHG~------~~~L~~ll-~~~g~~~~~~~vflGD~VDRG~~s~ev----------l-~lL~~lk~~~---p 115 (330)
T 1fjm_A 57 APLKICGDIHGQ------YYDLLRLF-EYGGFPPESNYLFLGDYVDRGKQSLET----------I-CLLLAYKIKY---P 115 (330)
T ss_dssp SSEEEECBCTTC------HHHHHHHH-HHHCSTTSSCEEECSCCSSSSSCHHHH----------H-HHHHHHHHHS---T
T ss_pred CceEEecCCCCC------HHHHHHHH-HHhCCCCcceEEeCCCcCCCCCChHHH----------H-HHHHHhhhhc---C
Confidence 368999999943 34678887 444444567899999999988754311 1 1232322111 2
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
..++.++||||..
T Consensus 116 ~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 116 ENFFLLRGNHECA 128 (330)
T ss_dssp TTEEECCCTTSSH
T ss_pred CceEEecCCchHh
Confidence 3699999999985
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0017 Score=68.29 Aligned_cols=74 Identities=19% Similarity=0.152 Sum_probs=47.7
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcC
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSG 117 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~ 117 (649)
..++++.+||+|-. ..+|.+++ +.+..... +.++++||++|.+....+. . ..+..+....
T Consensus 62 ~~~ri~viGDIHG~------~~~L~~ll-~~~g~~~~~~~~vflGD~VDRG~~s~ev----------l-~lL~~lk~~~- 122 (335)
T 3icf_A 62 PDVKISVCGDTHGQ------FYDVLNLF-RKFGKVGPKHTYLFNGDFVDRGSWSCEV----------A-LLFYCLKILH- 122 (335)
T ss_dssp TTCEEEEECCCTTC------HHHHHHHH-HHHCCCBTTEEEEECSCCSSSSTTHHHH----------H-HHHHHHHHHC-
T ss_pred cCceEEEEecCCCC------HHHHHHHH-HHcCCCCCCcEEEEeCCccCCCcChHHH----------H-HHHHHHhhhC-
Confidence 45899999999954 34677777 33433323 4699999999998754321 1 1233332211
Q ss_pred CCCceEEEecCCCCCC
Q 006340 118 LEKSIFYDIRGNHDNF 133 (649)
Q Consensus 118 l~~~p~~~I~GNHD~~ 133 (649)
...++.++||||..
T Consensus 123 --p~~v~llrGNHE~~ 136 (335)
T 3icf_A 123 --PNNFFLNRGNHESD 136 (335)
T ss_dssp --TTTEEECCCTTSSH
T ss_pred --CCcEEEecCchhhh
Confidence 23689999999975
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0013 Score=68.15 Aligned_cols=71 Identities=23% Similarity=0.201 Sum_probs=46.8
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
+++.+||+|-. ..+|.+++ +.......+-++++||++|.+....+. . ..+..++... ..
T Consensus 57 ~i~viGDIHG~------~~~L~~ll-~~~g~~~~~~~vfLGD~VDrG~~s~ev----------l-~lL~~lk~~~---p~ 115 (299)
T 3e7a_A 57 PLKICGDIHGQ------YYDLLRLF-EYGGFPPESNYLFLGDYVDRGKQSLET----------I-CLLLAYKIKY---PE 115 (299)
T ss_dssp SEEEECBCTTC------HHHHHHHH-HHHCSTTSSCEEECSCCSSSSSCHHHH----------H-HHHHHHHHHS---TT
T ss_pred CEEEEecCCCC------HHHHHHHH-HHhCCCCCccEEeCCcccCCCCCcHHH----------H-HHHHHHHhhC---CC
Confidence 58999999954 24677777 434444567899999999998754321 1 1222222111 23
Q ss_pred eEEEecCCCCCC
Q 006340 122 IFYDIRGNHDNF 133 (649)
Q Consensus 122 p~~~I~GNHD~~ 133 (649)
.++.++||||..
T Consensus 116 ~v~~lrGNHE~~ 127 (299)
T 3e7a_A 116 NFFLLRGNHECA 127 (299)
T ss_dssp TEEECCCTTSSH
T ss_pred cEEEEecCchhh
Confidence 699999999985
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0018 Score=68.59 Aligned_cols=71 Identities=15% Similarity=0.100 Sum_probs=47.2
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
+++.+||+|-. ..+|.+++ +.......+-++++||++|.+....+. . ..+..++... ..
T Consensus 71 pi~ViGDIHG~------~~dL~~ll-~~~g~~~~~~~vfLGD~VDRG~~s~Ev----------l-~lL~~lk~~~---p~ 129 (357)
T 3ll8_A 71 PVTVCGDIHGQ------FFDLMKLF-EVGGSPANTRYLFLGDYVDRGYFSIEC----------V-LYLWALKILY---PK 129 (357)
T ss_dssp SEEEECCCTTC------HHHHHHHH-HHHCCTTTCCEEECSCCSSSSTTHHHH----------H-HHHHHHHHHC---TT
T ss_pred cceeeccCCCC------HHHHHHHH-HhcCCCCCcEEEECCCccCCCcChHHH----------H-HHHHHhhhhc---CC
Confidence 58999999964 24677777 334445668899999999998754321 1 1233332211 23
Q ss_pred eEEEecCCCCCC
Q 006340 122 IFYDIRGNHDNF 133 (649)
Q Consensus 122 p~~~I~GNHD~~ 133 (649)
.++.++||||..
T Consensus 130 ~v~llrGNHE~~ 141 (357)
T 3ll8_A 130 TLFLLRGNHECR 141 (357)
T ss_dssp TEEECCCTTSSH
T ss_pred cEEEEeCchhhh
Confidence 689999999975
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.02 Score=58.74 Aligned_cols=177 Identities=15% Similarity=0.072 Sum_probs=91.3
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
.|++++++|+|-. +.+ ..+...+.+.-++.++|++++-||-+-.+..-. . ...+.++.. +.
T Consensus 4 ~m~ilf~GDv~G~---~G~-~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~---~----------~~~~~ln~~-G~- 64 (281)
T 1t71_A 4 SIKFIFLGDVYGK---AGR-NIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS---L----------KHYEFLKEA-GV- 64 (281)
T ss_dssp CCEEEEECEEBHH---HHH-HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC---H----------HHHHHHHHH-TC-
T ss_pred eEEEEEECCcCCh---HHH-HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcC---H----------HHHHHHHhc-CC-
Confidence 4899999999943 222 345555533223346899999999876553211 0 123333332 11
Q ss_pred CceEEEecCCCCCCCCCCCCCchhhhccc-c-cccccCC------CCccceEEEEeCCeeEEEEEecCCC-ccCCCCCCC
Q 006340 120 KSIFYDIRGNHDNFGVPIVGGSFDFFSKH-S-INGQLGR------KQNVNSVTVQIGDEKHLFVGFDSTM-SVGLRGPTN 190 (649)
Q Consensus 120 ~~p~~~I~GNHD~~~v~~~~~~~~~~~~y-s-~~~~l~~------~~~~~~~~~~~~~g~~~fIglD~~~-~pG~~~p~~ 190 (649)
- ....|||+...-+ ...++..+. . ....+.. .+ ..+..++.++.++.+|++-... +. |.
T Consensus 65 --D-a~TlGNHefD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g-~g~~I~e~~G~kIgVIgl~g~~~f~----~~- 132 (281)
T 1t71_A 65 --N-YITMGNHTWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLG-QGSLVFEFNKAKIRITNLLGTSVPL----PF- 132 (281)
T ss_dssp --C-EEECCTTTTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSS-BSEEEEECSSCEEEEEEEECTTSCC----SS-
T ss_pred --C-EEEEccCcccCCc---cHHHHhhhcCEEeeccCCcccccccCC-CCeEEEEECCEEEEEEEeecccccc----Cc-
Confidence 2 3477999986420 111111110 0 0000100 11 1235667788899999985332 11 00
Q ss_pred CCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 191 LFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 191 ~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
.++ +..+.+++.++ + + +.+.+|+..|-=. .+....+...+ .-++++++.||+|....
T Consensus 133 ---~~~-~pf~~a~~~v~--~--~-~~diIIv~~H~g~-----t~Ek~~la~~~-dg~VD~VvGgHTHv~t~ 189 (281)
T 1t71_A 133 ---KTT-NPFKVLKELIL--K--R-DCDLHIVDFHAET-----TSEKNAFCMAF-DGYVTTIFGTHTHVPSA 189 (281)
T ss_dssp ---CBC-CHHHHHHHHHT--T--C-CCSEEEEEEECSC-----HHHHHHHHHHH-TTTSSEEEEESSSSCCT
T ss_pred ---ccc-CHHHHHHHHHh--h--c-CCCEEEEEeCCCc-----hHHHHHHHHhC-CCCeEEEEeCCCCcCCC
Confidence 122 22345555555 2 1 3458999999311 11111233222 23599999999998864
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0038 Score=68.97 Aligned_cols=72 Identities=15% Similarity=0.095 Sum_probs=46.5
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
.++..++|+|-. ..+|.+++ +.......|.++++||++|.+...... . ..+..+.... .
T Consensus 83 ~pI~VIGDIHGq------~~dL~~LL-~~~g~p~~d~yVFLGDyVDRGp~S~Ev----------l-~lL~aLk~~~---P 141 (521)
T 1aui_A 83 APVTVCGDIHGQ------FFDLMKLF-EVGGSPANTRYLFLGDYVDRGYFSIEC----------V-LYLWALKILY---P 141 (521)
T ss_dssp SSEEEECCCTTC------HHHHHHHH-HHHCCTTTCCEEECSCCSSSSSCHHHH----------H-HHHHHHHHHS---T
T ss_pred cceeeccCCCCC------HHHHHHHH-HhcCCCCcceEEEcCCcCCCCCCHHHH----------H-HHHHHHhhhC---C
Confidence 468999999943 34677777 322233458899999999998754321 1 1233332111 1
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
..++.++||||..
T Consensus 142 ~~v~lLRGNHE~~ 154 (521)
T 1aui_A 142 KTLFLLRGNHECR 154 (521)
T ss_dssp TTEEECCCTTSSH
T ss_pred CeEEEecCCccHH
Confidence 3589999999975
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.15 Score=51.33 Aligned_cols=173 Identities=14% Similarity=0.087 Sum_probs=88.1
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||+++|+|+=-. +.+ ..+...+. .+++.. |++++-|+-+-.+..-. . ...+.|... +
T Consensus 1 m~ilfiGDi~g~---~G~-~~v~~~l~-~lr~~~-d~vi~ngen~~~G~g~~---~----------~~~~~l~~~-G--- 57 (252)
T 2z06_A 1 MRVLFIGDVMAE---PGL-RAVGLHLP-DIRDRY-DLVIANGENAARGKGLD---R----------RSYRLLREA-G--- 57 (252)
T ss_dssp CEEEEECCBCHH---HHH-HHHHHHHH-HHGGGC-SEEEEECTTTTTTSSCC---H----------HHHHHHHHH-T---
T ss_pred CEEEEEEecCCc---ccH-HHHHHHHH-HHHhhC-CEEEEeCCCccCCCCcC---H----------HHHHHHHhC-C---
Confidence 689999998432 222 35677773 454445 88777766554443211 0 122333332 2
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhcccccc--cccCCCC-ccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCH
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN--GQLGRKQ-NVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPAD 197 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~--~~l~~~~-~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~ 197 (649)
.-+. ..|||+... +...++..+.... ..+.... ...+..++.++.++.++++-..... ..+++
T Consensus 58 ~D~~-T~GNHefD~----~~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~---------~~~~~ 123 (252)
T 2z06_A 58 VDLV-SLGNHAWDH----KEVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFM---------DPLDD 123 (252)
T ss_dssp CCEE-ECCTTTTSC----TTHHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTS---------CCCCC
T ss_pred CCEE-EeccEeeEC----chHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCc---------cccCC
Confidence 2343 779999864 1222233221100 0111100 1124567778889999888543211 02222
Q ss_pred HHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 198 QLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 198 ~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
..+.+++.+++.+ .+.+|+..|-=. .++...+...+ .-++++++-||+|....
T Consensus 124 -pf~~~~~~v~~lk-----~d~IIv~~H~g~-----tsek~~la~~~-dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 124 -PFRALDRLLEEEK-----ADYVLVEVHAEA-----TSEKMALAHYL-DGRASAVLGTHTHVPTL 176 (252)
T ss_dssp -HHHHHHHHHHHCC-----CSEEEEEEECSC-----HHHHHHHHHHH-BTTBSEEEEESSCSCBS
T ss_pred -HHHHHHHHHHHhC-----CCEEEEEeCCCc-----HHHHHHHHHhC-CCCeEEEEcCCCCcCCC
Confidence 2334555555442 348999999321 11111222222 23599999999998763
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.16 Score=51.32 Aligned_cols=173 Identities=14% Similarity=0.136 Sum_probs=89.4
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||+++++|+= +. +.+ ..++..+ +.+++.. |++++-|+-+..+..-. . ...+.+... +.
T Consensus 1 m~ilf~GDv~-g~--~G~-~~~~~~l-~~lr~~~-d~vi~nge~~~~G~g~~---~----------~~~~~l~~~-G~-- 58 (255)
T 1t70_A 1 MRVLFIGDVF-GQ--PGR-RVLQNHL-PTIRPQF-DFVIVNMENSAGGFGMH---R----------DAARGALEA-GA-- 58 (255)
T ss_dssp CEEEEECCBB-HH--HHH-HHHHHHH-HHHGGGC-SEEEEECTBTTTTSSCC---H----------HHHHHHHHH-TC--
T ss_pred CEEEEEeccC-Ch--HHH-HHHHHHH-HHHHhhC-CEEEECCCCccCCcCCC---H----------HHHHHHHhC-CC--
Confidence 6899999995 22 222 3566666 3344444 99888888765553211 0 123333332 12
Q ss_pred ceEEEecCCCCCCCCCCCCCchhhhcccc--cc--cccCCCCc--cceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCC
Q 006340 121 SIFYDIRGNHDNFGVPIVGGSFDFFSKHS--IN--GQLGRKQN--VNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGH 194 (649)
Q Consensus 121 ~p~~~I~GNHD~~~v~~~~~~~~~~~~ys--~~--~~l~~~~~--~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~ 194 (649)
-+ ...|||+... +...++..+.. .. ..+...+. .+...++.++.++.+|++-...+. ..
T Consensus 59 -Da-~TlGNHefD~----~~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~---------~~ 123 (255)
T 1t70_A 59 -GC-LTLGNHAWHH----KDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFM---------EA 123 (255)
T ss_dssp -SE-EECCTTTTSS----TTHHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTS---------CC
T ss_pred -CE-EEeccccccC----chHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCc---------cc
Confidence 23 3669999863 12222222111 00 11110111 113456777889999988543211 02
Q ss_pred CCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhCCceEEEeCcccCCCC
Q 006340 195 PADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLCGHLHTRFG 262 (649)
Q Consensus 195 l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~g 262 (649)
+++ ..+.+++.+++. +.+.+|+..|-=. .+ ....+...+ .-++++++.||+|....
T Consensus 124 ~~~-p~~~~~~~v~~l-----~~d~IIv~~H~e~----t~-Ek~~la~~~-dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 124 VDN-PFRTMDALLERD-----DLGTVFVDFHAEA----TS-EKEAMGWHL-AGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp CSC-HHHHHHHHTTCS-----SCCEEEEEEECSC----HH-HHHHHHHHH-TTSSSEEEEESSCSCBS
T ss_pred ccC-HHHHHHHHHHHh-----CCCEEEEEeCCCC----hH-HHHHHHHhC-CCCeEEEEeCCCCcCCC
Confidence 222 234466666654 2348999999311 11 111233222 23599999999998864
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.017 Score=63.29 Aligned_cols=155 Identities=10% Similarity=0.040 Sum_probs=78.6
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHh-----------ccCCcEEEEcCCCCCCCCcchhh-h----------hh
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALS-----------MISPSLVLITGDLTDGKSKDLLT-M----------KQ 97 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~-----------~~kPD~VIitGDLtd~~~~~~~~-s----------~Q 97 (649)
.-+++.+||+|++.........++.++ +.+. ..+...+|+.||+++....+... . .-
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~-d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~ 278 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLV-DVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAA 278 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHH-HHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHH
T ss_pred CCEEEEECCcccCCCcccchHHHHHHH-HHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchh
Confidence 379999999999975312233455444 3332 24678999999999875321110 0 00
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCCCCCC--CCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEE
Q 006340 98 NEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVP--IVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFV 175 (649)
Q Consensus 98 ~e~eW~~Y~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~--~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fI 175 (649)
..+..+...+++.++.. .+|+..+|||||.-+.. .-.-...+|.+-.... ......|++.++.++ +.|+
T Consensus 279 ~~~~~~~ld~~L~~l~~-----~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~--~~~~vtNP~~~~i~G--~~~L 349 (476)
T 3e0j_A 279 SVEAVKMLDEILLQLSA-----SVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYS--TLQLVTNPYQATIDG--VRFL 349 (476)
T ss_dssp HHHHHHHHHHHHHHHHT-----TSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTST--TEEECCSSEEEEETT--EEEE
T ss_pred hHHHHHHHHHHHHhccc-----CceEEecCCCCCcccccCCCCCcCHHHhhhhhhcC--ccEEeCCCeEEEECC--EEEE
Confidence 11233445566666643 46999999999986531 1000111221100000 122334567788765 5566
Q ss_pred EecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 006340 176 GFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQ 209 (649)
Q Consensus 176 glD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~ 209 (649)
+.......... .+. ..++.++.+++.|+.
T Consensus 350 gtsGqnidDi~---ky~--~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 350 GTSGQNVSDIF---RYS--SMEDHLEILEWTLRV 378 (476)
T ss_dssp ECSSHHHHHHH---HHS--CCCCHHHHHHHHHHB
T ss_pred EECCCCHHHHH---hcC--CCCCHHHHHHHHHHH
Confidence 54211100000 011 113467888888873
|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
Probab=94.68 E-value=0.074 Score=51.25 Aligned_cols=93 Identities=15% Similarity=0.039 Sum_probs=64.8
Q ss_pred cceEEeecCCCCccccccccccccccccccccccccEEEEEEeCC-CCeEEEEEEeCCcCCCchhhHHhhhccccCCCCC
Q 006340 342 RKTIVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRALVFSVS-PILSVVAKVYDSRSGKHDLVMEELMRKRTDNSSR 420 (649)
Q Consensus 342 ~~p~iliT~P~~~~~~~~~~~~~~~~~~~~~~~~~~IrvlvFs~s-~~~~V~v~id~~~~~~~~~~~e~~~~~~~~~~~~ 420 (649)
..|.+-++.|.+...... .. + -.|.+.+-... .+.+|++++||...+. ..
T Consensus 90 ~~Ptv~itsP~~g~~~~~---------~~--~--vtl~~~AsD~~g~V~~Ve~~~dg~~v~t---------------~t- 140 (190)
T 3pdd_A 90 VKPTVKLTAPKSNVVAYG---------NE--F--LKITATASDSDGKISRVDFLVDGEVIGS---------------DR- 140 (190)
T ss_dssp CCCEEEEEECCTTCCCBT---------TS--E--EEEEEEEECSSSCEEEEEEEETTEEEEE---------------EC-
T ss_pred CCCceeecCCCCCcEEec---------CC--e--EEEEEEEECCCCcEEEEEEEECCEEEec---------------cc-
Confidence 468888888876532111 00 1 14667775444 4899999999866543 11
Q ss_pred CCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCceeeeeeeEEEcCccc
Q 006340 421 GDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSSELRPFSINGLSA 469 (649)
Q Consensus 421 ~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~~~~~~~fs~~~~~~ 469 (649)
..=|...|++ .+|.| +|+|+|+|..|.+..+..-.|.+++.+.
T Consensus 141 ~~~y~~~~~~---~~G~~---tl~a~A~D~aGn~s~s~~vtvtv~~~~~ 183 (190)
T 3pdd_A 141 EAPYEYEWKA---VEGNH---EISVIAYDDDDAASTPDSVKIFVKQARL 183 (190)
T ss_dssp SSSEEEEEEC---CSEEE---EEEEEEEETTCCBCCCEEEEEEEBCGGG
T ss_pred CCCEEEEEec---CCeeE---EEEEEEEECCCCEEecceEEEEECCccc
Confidence 2338888876 78888 7999999999999877656788888774
|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
Probab=93.89 E-value=0.096 Score=50.44 Aligned_cols=69 Identities=20% Similarity=0.067 Sum_probs=52.7
Q ss_pred cEEEEEEeCCCCeEEEEEEeCCcCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCcee
Q 006340 377 TIRALVFSVSPILSVVAKVYDSRSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSS 456 (649)
Q Consensus 377 ~IrvlvFs~s~~~~V~v~id~~~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~~ 456 (649)
.|.+.+.....+.+|++++||...+. .. ..-|...|+. ...|.| +|+++|+|..|....
T Consensus 20 tv~~~As~d~~V~~Ve~~~dg~~v~~---------------~t-~~~ys~~~~~--~~~G~h---tlta~A~D~aGn~s~ 78 (190)
T 3pdd_A 20 NISATVKSKTPVSKVEFYNGDTLISS---------------DT-TAPYTAKITG--AAVGAY---NLKAVAVLSDGRRIE 78 (190)
T ss_dssp EEEEEECCSSCEEEEEEEETTEEEEE---------------EC-SSSEEEEECS--CCSEEE---EEEEEEEETTSCEEE
T ss_pred EEEEEEeCCCCEEEEEEEECCEEEcc---------------cc-CCceEEEecc--CCCccE---EEEEEEEECCCCEee
Confidence 57788876678999999999876543 11 2338888864 567887 799999999999987
Q ss_pred eeeeeEEEcC
Q 006340 457 SELRPFSING 466 (649)
Q Consensus 457 ~~~~~fs~~~ 466 (649)
+....|.|+.
T Consensus 79 s~~v~vtV~~ 88 (190)
T 3pdd_A 79 SPVTPVLVKV 88 (190)
T ss_dssp CCCEEEEEEC
T ss_pred ecceeEEecc
Confidence 6446888874
|
| >1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1 | Back alignment and structure |
|---|
Probab=92.95 E-value=0.11 Score=55.63 Aligned_cols=94 Identities=9% Similarity=-0.047 Sum_probs=60.3
Q ss_pred ceEEeecCCCCccccccccccccccccccccccccEEEEEEeC--CCCeEEEEEEeCC-cCCCchhhH-Hhhhcccc---
Q 006340 343 KTIVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRALVFSV--SPILSVVAKVYDS-RSGKHDLVM-EELMRKRT--- 415 (649)
Q Consensus 343 ~p~iliT~P~~~~~~~~~~~~~~~~~~~~~~~~~~IrvlvFs~--s~~~~V~v~id~~-~~~~~~~~~-e~~~~~~~--- 415 (649)
.+.-.|++|.+.... .. . . -.|+=.+||+ ..|+.|+|++||+ .|..+++.. +.++.+..
T Consensus 265 ~v~S~I~~P~~~~~v--------~~-g--~---~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~~~ 330 (393)
T 1ogp_A 265 PVQSAICSVEDVQMV--------KP-G--K---VSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSS 330 (393)
T ss_dssp CCEEEECSSCSEEEE--------CS-E--E---EEEEEEEECSTTCCEEEEEEESSTTSSCEECEEESSSSSCCCSSSTT
T ss_pred cccEEEeCCCCCCEe--------cC-C--c---EEEEEEEEcCCCCCEEEEEEEcCCCCCceEeeccCcCcccccccccc
Confidence 355577888765321 10 1 1 2688899987 6899999999987 698876643 21221110
Q ss_pred CCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCceee
Q 006340 416 DNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSS 457 (649)
Q Consensus 416 ~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~~~ 457 (649)
...-+=-.|.++|.+. . .+ .|.|+|+|..|++.-.
T Consensus 331 ~~~~aW~~W~~~~~~~---~-~~---~i~vRA~D~~gn~QP~ 365 (393)
T 1ogp_A 331 SDKWAWVLFEATIDVS---Q-TT---EVIAKAVDSAANVQPE 365 (393)
T ss_dssp SCTTSCEEEEEEEEES---S-CE---EEEEEEEETTCCBCCS
T ss_pred CCCCEEEEEEEEEecC---C-Ce---EEEEEEEcCCCCcCCC
Confidence 0111226888888542 2 44 7999999999998754
|
| >2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A* | Back alignment and structure |
|---|
Probab=92.12 E-value=0.18 Score=53.78 Aligned_cols=73 Identities=10% Similarity=0.048 Sum_probs=48.6
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCC-cCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCC
Q 006340 377 TIRALVFSV--SPILSVVAKVYDS-RSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGR 453 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~-~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~ 453 (649)
.|+=.+||+ ..|++|+|++||+ .|..+++..+... ..+.-+=.+|.+.|.+ ..| ..+.|.|+|+|..|+
T Consensus 272 ~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~---~~~~~~W~~W~~~~~~---~~g--~~~~i~~RA~D~~g~ 343 (372)
T 2a9d_A 272 TVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAP---PGRAWAWALWELTVPV---EAG--TELEIVCKAVDSSYN 343 (372)
T ss_dssp EEEEEEECSTTCCEEEEEEESBSSSSCEECEECSCCCC---TTCCCSCEEEEEEEEE---CTT--CEEEEEEEEEETTCC
T ss_pred EEEEEEEcCCCCCEEEEEEEcCCCCcceEeEcCCcccc---cCCccEEEEEEEeEEc---CCC--CEEEEEEEEEcCCCC
Confidence 688899974 5799999999987 6987654321100 0011122567777733 344 234899999999999
Q ss_pred ceee
Q 006340 454 LSSS 457 (649)
Q Consensus 454 ~~~~ 457 (649)
+.-.
T Consensus 344 ~QP~ 347 (372)
T 2a9d_A 344 VQPD 347 (372)
T ss_dssp BCCS
T ss_pred cCCC
Confidence 8754
|
| >1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A* | Back alignment and structure |
|---|
Probab=91.13 E-value=0.24 Score=54.29 Aligned_cols=73 Identities=10% Similarity=0.048 Sum_probs=48.6
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCC-cCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCC
Q 006340 377 TIRALVFSV--SPILSVVAKVYDS-RSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGR 453 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~-~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~ 453 (649)
.|+=.+||+ ..|++|+|++||+ .|..+++..+... ..+.-+=.+|.+.|.+ ..| ..+.|.|+|+|..|+
T Consensus 366 ~v~G~A~sggg~~I~rVEVS~DgG~tW~~A~l~~~~~~---~~~~~~W~~W~~~~~~---~~g--~~~~i~~RA~D~~g~ 437 (466)
T 1sox_A 366 TVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAP---PGRAWAWALWELTVPV---EAG--TELEIVCKAVDSSYN 437 (466)
T ss_dssp EEEEEEECSTTCCEEEEEEESBTTSSCEECEECSCCCC---TTCCCSCEEEEEEEEE---CTT--CEEEEEEEEEETTCC
T ss_pred EEEEEEEcCCCCCEEEEEEEcCCCCcceEeecCCcccc---cCCccEEEEEEEeEEc---CCC--CEEEEEEEEEcCCCC
Confidence 688899974 5799999999987 6987654321100 0011122567777743 344 234899999999999
Q ss_pred ceee
Q 006340 454 LSSS 457 (649)
Q Consensus 454 ~~~~ 457 (649)
+.-.
T Consensus 438 ~QP~ 441 (466)
T 1sox_A 438 VQPD 441 (466)
T ss_dssp BCCS
T ss_pred cCCC
Confidence 8754
|
| >2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A* | Back alignment and structure |
|---|
Probab=90.75 E-value=0.27 Score=52.28 Aligned_cols=88 Identities=11% Similarity=-0.040 Sum_probs=59.2
Q ss_pred ceEEeecCCCCccccccccccccccccccccccccEEEEEE-eCCCCeEEEEEEeCC-cCCCchhhHHhhhccccCCCCC
Q 006340 343 KTIVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRALVF-SVSPILSVVAKVYDS-RSGKHDLVMEELMRKRTDNSSR 420 (649)
Q Consensus 343 ~p~iliT~P~~~~~~~~~~~~~~~~~~~~~~~~~~IrvlvF-s~s~~~~V~v~id~~-~~~~~~~~~e~~~~~~~~~~~~ 420 (649)
.+.-.||+|.+...... . . -.|+=.+| .+..|++|+|++||+ .|..+++.. + ...-+
T Consensus 262 ~v~S~I~~P~~~~~v~~---------g--~---~~v~G~A~~Gg~~I~rVEVS~DgG~tW~~A~l~~---~----~~~~~ 320 (373)
T 2blf_A 262 DVRSFITNVENGASVKA---------G--E---VPLRGIAFDGGYGITQVSVSADAGKSWTNATLDP---G----LGKYS 320 (373)
T ss_dssp CCEEEECSCCTTEEECS---------E--E---EEEEEEEECSSSCEEEEEEESSTTSSCEECEECC---C----SCTTS
T ss_pred ccCEEEEecCCCCEecc---------c--e---EEEEEEEEcCCCCEEEEEEEeCCCCCceEeEeCC---C----CCCCe
Confidence 35557888876532110 1 1 26888899 556899999999987 698765431 1 11222
Q ss_pred CCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCceee
Q 006340 421 GDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSSS 457 (649)
Q Consensus 421 ~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~~~ 457 (649)
=-.|.++|. ...|.| .|.|+|+|..|++.-.
T Consensus 321 W~~W~~~~~---~~~g~~---~i~~RA~D~~g~~QP~ 351 (373)
T 2blf_A 321 FRGWKAVLP---LTKGDH---VLMCRATNARGETQPM 351 (373)
T ss_dssp CEEEEEEEE---ECSEEE---EEEEEEEETTSCCCCS
T ss_pred EEEEEEEEE---cCCCcE---EEEEEEEcCCCCcCCC
Confidence 368999983 355665 7999999999998753
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.33 E-value=1 Score=49.15 Aligned_cols=92 Identities=9% Similarity=0.112 Sum_probs=57.6
Q ss_pred CceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhh--------hhhhHHH-HHHHHH
Q 006340 39 HVIWAVQLSDLHFSVHHPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTM--------KQNEVEW-MEYQNV 108 (649)
Q Consensus 39 ~~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s--------~Q~e~eW-~~Y~~v 108 (649)
..++++..|.++.....-. .+.|.+++ +.++. .+||.+|++|..+|......... .+....+ +.|+..
T Consensus 146 ~~l~ivvAsGPyT~sdnl~-yepL~~Ll-~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~ 223 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFS-LELLQEFI-DSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKL 223 (460)
T ss_dssp SCEEEEEEESCCSCSSCCC-CHHHHHHH-HHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHH
T ss_pred CCcEEEEEeCCccCCCccC-hHHHHHHH-HHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHH
Confidence 4689999999997765432 35688898 54545 58999999999998875311000 0000001 234444
Q ss_pred HHHHHHhcCCCCceEEEecCCCCCC
Q 006340 109 MQDVIKRSGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 109 l~~L~~~~~l~~~p~~~I~GNHD~~ 133 (649)
+..+.+.- -+.+.+..|||+||..
T Consensus 224 i~~il~~l-~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 224 FTPILKTI-SPHIQTVLIPSTKDAI 247 (460)
T ss_dssp THHHHTTS-CTTSEEEEECCTTBTT
T ss_pred HHHHHHhc-cCCCEEEEeCCccccc
Confidence 44333221 2467899999999985
|
| >2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta} | Back alignment and structure |
|---|
Probab=84.57 E-value=0.65 Score=50.80 Aligned_cols=77 Identities=9% Similarity=-0.092 Sum_probs=49.7
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCC-cCCCchhhHHhhhccc------cC---------CCCCCCeeeeccCCCCCCCCCC
Q 006340 377 TIRALVFSV--SPILSVVAKVYDS-RSGKHDLVMEELMRKR------TD---------NSSRGDLYAAPWNYRAFEDSSP 438 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~-~~~~~~~~~e~~~~~~------~~---------~~~~~~l~~~~w~~~~~~~g~h 438 (649)
.|+=.+||+ ..|++|+|++||+ .|..+++....++.+. -+ ..-.=-.|.+.|.... ..|.+
T Consensus 314 ~v~GyA~sGGGr~I~RVEVS~DgG~TW~~A~L~~pe~~~r~~~~~~~~g~~~~~~~~~~~~~W~~W~~~~~~~~-~~g~~ 392 (474)
T 2bih_A 314 EIAGFGYNGGGVRIGRIEVSLDKGKSWKLADIDYPEDRYREAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSE-LARSK 392 (474)
T ss_dssp EEEEEEECSTTCCEEEEEEESSSSSSCEECEEECTHHHHHHTCCEEETTEEECGGGCCCCCSCEEEEEEEEHHH-HHTCS
T ss_pred EEEEEEEcCCCCCEEEEEEEcCCCCCceECcccCccccccccccccccccccccccccccceeeeeEEEEeccc-CCCce
Confidence 688899975 5899999999987 6988776532222110 00 0011135777763211 13556
Q ss_pred CceEEEEEEEeCCCCceee
Q 006340 439 QRFWLEIEVTDIMGRLSSS 457 (649)
Q Consensus 439 ~~~~i~V~~~D~~G~~~~~ 457 (649)
.|.|+|+|..|++.-.
T Consensus 393 ---~I~vRA~D~sgn~QP~ 408 (474)
T 2bih_A 393 ---DILIRGMDERMMVQPR 408 (474)
T ss_dssp ---EEEEEEEETTCCBCCS
T ss_pred ---EEEEEEEcCCCCcCCC
Confidence 6999999999998754
|
| >2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta} | Back alignment and structure |
|---|
Probab=84.50 E-value=0.76 Score=49.63 Aligned_cols=77 Identities=9% Similarity=-0.092 Sum_probs=49.9
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCC-cCCCchhhHHhhhccc------cC---------CCCCCCeeeeccCCCCCCCCCC
Q 006340 377 TIRALVFSV--SPILSVVAKVYDS-RSGKHDLVMEELMRKR------TD---------NSSRGDLYAAPWNYRAFEDSSP 438 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~-~~~~~~~~~e~~~~~~------~~---------~~~~~~l~~~~w~~~~~~~g~h 438 (649)
.|+=.+||+ ..|++|+|++||+ .|..+++....++.+. -+ ..-.=-.|.+.|.... ..|.+
T Consensus 264 ~v~GyA~sGGGr~I~rVEVS~DgG~tW~~A~L~~pe~~~~~~~~~~~~g~~~~~~~~~~~~~W~~W~~~~~~~~-~~g~~ 342 (424)
T 2bii_A 264 EIAGFGYNGGGVRIGRIEVSLDKGKSWKLADIDYPEDRYREAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSE-LARSK 342 (424)
T ss_dssp EEEEEEECSTTCCEEEEEEESSTTSSCEECEEECTHHHHHHTCSEEETTEEECGGGCCCCCSCEEEEEEEEHHH-HHTCS
T ss_pred EEEEEEEcCCCCCEEEEEEEcCCCCCceEeEccCcCCcccccccccccccccccccccccceeeeeEEEEeccc-CCCce
Confidence 688899975 5899999999987 6988876532222110 00 0011136777763211 24566
Q ss_pred CceEEEEEEEeCCCCceee
Q 006340 439 QRFWLEIEVTDIMGRLSSS 457 (649)
Q Consensus 439 ~~~~i~V~~~D~~G~~~~~ 457 (649)
.|.|+|+|..|++.-.
T Consensus 343 ---~I~vRA~D~~gn~QP~ 358 (424)
T 2bii_A 343 ---DILIRGMDERMMVQPR 358 (424)
T ss_dssp ---EEEEEEEETTCCBCCS
T ss_pred ---EEEEEEEcCCCCcCCC
Confidence 6999999999998754
|
| >2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus} | Back alignment and structure |
|---|
Probab=82.65 E-value=0.99 Score=48.23 Aligned_cols=68 Identities=13% Similarity=0.114 Sum_probs=48.5
Q ss_pred cEEEEEEeC-CCCeEEEEEEeCC-cCCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCc
Q 006340 377 TIRALVFSV-SPILSVVAKVYDS-RSGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRL 454 (649)
Q Consensus 377 ~IrvlvFs~-s~~~~V~v~id~~-~~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~ 454 (649)
.|+=.+|++ .+|++|+|++||+ .|..+++.... ...+-..|...|.+ ..|.| .|.|+|+|..|++
T Consensus 285 ~v~G~A~~G~g~I~rVevS~DgG~tW~~A~L~~~~-------~~~aw~~w~~~~~~---~~g~~---~i~vRA~D~~gn~ 351 (390)
T 2xts_A 285 VISGLAWSGNGRITRVDVSLDGGKNWTTARITGQA-------LPKALTRFHLDIDW---DGSEM---LLQSRAVDETGYV 351 (390)
T ss_dssp EEEEEEECTTSCEEEEEEESBTTSSCEECEEESCC-------CTTSCEEEEEEEEE---CSCCE---EEEEEEEETTCCB
T ss_pred EEEEEEEcCCCcEEEEEEecCCCCcEEEeeccCCC-------CCCceEEEEEEEEc---CCCcc---EEEEEEEcCCCCc
Confidence 688899966 4799999999987 58766442110 11223578888854 34555 7999999999998
Q ss_pred eee
Q 006340 455 SSS 457 (649)
Q Consensus 455 ~~~ 457 (649)
.-.
T Consensus 352 QP~ 354 (390)
T 2xts_A 352 QPT 354 (390)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 649 | ||||
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 2e-04 | |
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 8e-04 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 0.002 | |
| d1ii7a_ | 333 | d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus | 0.004 |
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 40.8 bits (94), Expect = 2e-04
Identities = 22/233 (9%), Positives = 56/233 (24%), Gaps = 27/233 (11%)
Query: 44 VQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWM 103
+ + + + ++ P ++++ G++ ++ + E E
Sbjct: 6 LAIKNFKERFDLLPKLKGV-------IAEKQPDILVVVGNILKNEA------LEKEYERA 52
Query: 104 EYQNVMQDVIKRSGLEKSIFYDIRGNHDNFG-----VPIVGGSFDFFSKHSINGQLGRKQ 158
+ E I + G +V G D K + +
Sbjct: 53 HLARREPNRKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAET 112
Query: 159 NVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPV 218
++ + + + G + G + F E KP
Sbjct: 113 AYPNI-RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPR 171
Query: 219 TKITFGHFPVSFSASSHS--------GRSLQDIFLKHSLSAYLCGHLHTRFGK 263
+T + P + + I + + GH+
Sbjct: 172 RLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL 224
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 39.5 bits (91), Expect = 8e-04
Identities = 27/223 (12%), Positives = 55/223 (24%), Gaps = 31/223 (13%)
Query: 75 PSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFG 134
VL GDL+ + V W + + + + GNH+
Sbjct: 36 GQTVLFVGDLSY----ADRYPNHDNVRWDTWGRFTERSVAYQ-----PWIWTAGNHEIEF 86
Query: 135 VPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGH 194
P + + F S + + + +
Sbjct: 87 APEINETEPFKPFSYRYHVPYEASQSTS---------PFWYSIKRASAHIIVLSSYSAYG 137
Query: 195 PADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSG------RSLQDIFLKHS 248
T + EL + ++ I H P+ S + H + F+K+
Sbjct: 138 RGTPQYTWLKKEL--RKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYK 195
Query: 249 LSAYLCGHLHTRFGKNLKRHHYMDHNFLSQKFFQSNMHQIPLG 291
+ GH+H +R + + +
Sbjct: 196 VDVVFAGHVH-----AYERSERVSNIAYKITNGLCTPVKDQSA 233
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 38.2 bits (87), Expect = 0.002
Identities = 15/189 (7%), Positives = 38/189 (20%), Gaps = 26/189 (13%)
Query: 75 PSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFG 134
+ + G+L + ++ S Y + G D
Sbjct: 33 ADAIALIGNLMPK--------------AAKSRDYAAFFRILSEAHLPTAY-VPGPQDAPI 77
Query: 135 VPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGH 194
+ + + H + T +L G ++ +
Sbjct: 78 WEYLREAANVELVHPEMRNVHE-------TFTFWRGPYLVAGVGGEIADEGEPEEHEALR 130
Query: 195 PADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKHSLSAYLC 254
+ L + + F P + + + H+ L
Sbjct: 131 YPAWVAEYRLKALWELKDYPKIFL----FHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLV 186
Query: 255 GHLHTRFGK 263
+
Sbjct: 187 AGKGQKHEM 195
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 37.4 bits (85), Expect = 0.004
Identities = 36/236 (15%), Positives = 67/236 (28%), Gaps = 28/236 (11%)
Query: 44 VQLSDLHF---SVHHPDRASDFKRIVGPALSMI---SPSLVLITGDLTDGKSKDLLTMKQ 97
L+D+H H P R +F AL + + +LI GDL T+K+
Sbjct: 4 AHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKK 63
Query: 98 NEVEWMEYQNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRK 157
+ V + I GNHD + + +G +
Sbjct: 64 AIALLQIPKEHSIPV-----------FAIEGNHDRTQR--GPSVLNLLEDFGLVYVIGMR 110
Query: 158 QNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKP 217
++ +E + + +L H + + + + +P
Sbjct: 111 ------KEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLFRP 164
Query: 218 VT-KITFGHFPVSFSASSHSGR--SLQDIFLKHSLSAYLCGHLHTRFGKNLKRHHY 270
I H V + + + L Y GH+H R+ +
Sbjct: 165 TDNAILMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGHIHKRYETSYSGSPV 220
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 649 | |||
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.9 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.89 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.85 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.82 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.78 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.74 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.72 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.42 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.11 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.09 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.08 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.94 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.83 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.59 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.48 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.31 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.8 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.52 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.41 | |
| d2a9da1 | 123 | Sulfite oxidase, C-terminal domain {Chicken (Gallu | 96.49 | |
| d1ogpa1 | 127 | Sulfite oxidase, C-terminal domain {Mouse-ear cres | 95.02 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 93.18 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 92.9 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 92.3 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 91.8 |
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=7.1e-23 Score=206.03 Aligned_cols=189 Identities=18% Similarity=0.218 Sum_probs=124.8
Q ss_pred CCCceEEEEEcCCCCCCCC------CCcHHHHHHHHHHHHh-ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHH
Q 006340 37 PEHVIWAVQLSDLHFSVHH------PDRASDFKRIVGPALS-MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVM 109 (649)
Q Consensus 37 p~~~~~fv~ISDlHls~~~------~~~~~~l~~~i~~~l~-~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl 109 (649)
|...|||+||||+|+.... .+..+.|++++++..+ ..+||+||++|||++.+..+ +|+.+++.+
T Consensus 1 p~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~---------~~~~~~~~l 71 (256)
T d2hy1a1 1 PRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPA---------AYRKLRGLV 71 (256)
T ss_dssp CCCSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHH---------HHHHHHHHH
T ss_pred CCCCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCChh---------HHHHHHHHh
Confidence 3457999999999996643 1234568888854332 35899999999999876532 344455566
Q ss_pred HHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCC
Q 006340 110 QDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPT 189 (649)
Q Consensus 110 ~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~ 189 (649)
+++.+.. ++|++.++||||... .+.++... .....+.. .+....+ ...|+++|+....
T Consensus 72 ~~~~~~~---~~p~~~v~GNHD~~~---------~~~~~~~~-~~~~~~~~-~~~~~~~--~~~~~~ldt~~~~------ 129 (256)
T d2hy1a1 72 EPFAAQL---GAELVWVMGNHDDRA---------ELRKFLLD-EAPSMAPL-DRVCMID--GLRIIVLDTSVPG------ 129 (256)
T ss_dssp HHHHHHH---TCEEEECCCTTSCHH---------HHHHHTTC-CCCCCSCC-CEEEEET--TEEEEECCCBCTT------
T ss_pred hhhhhhc---CCCEEEEcccccchh---------hhhhhhcc-cccccccc-ceEEEec--ccceeeeeeeecC------
Confidence 5554321 369999999999531 22222111 01111122 2344443 4789999876532
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCcc-------CCCCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 190 NLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFS-------ASSHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 190 ~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~-------~~~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
...|.++++|++||+++|++.+ ++++|+++|+|+... ....+...+.++++++++++++|||+|...
T Consensus 130 ~~~g~~~~~~~~wl~~~L~~~~-----~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~ 203 (256)
T d2hy1a1 130 HHHGEIRASQLGWLAEELATPA-----PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYST 203 (256)
T ss_dssp CSSBCCCHHHHHHHHHHHTSCC-----TTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCE
T ss_pred CcCCcccHHHHHHHHHHHHhhh-----ccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhh
Confidence 3467899999999999998643 247888999886531 122356789999999999999999999654
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.89 E-value=2e-22 Score=205.08 Aligned_cols=184 Identities=23% Similarity=0.330 Sum_probs=121.5
Q ss_pred eEEEEEcCCCCCCCCC------CcHHHHHHHHHHHHhc--cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP------DRASDFKRIVGPALSM--ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDV 112 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~------~~~~~l~~~i~~~l~~--~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L 112 (649)
|+|+||||+|++.... +....++++++. +++ .+||+|+++|||+|.+..+ .|+.+.+.+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~-i~~~~~~~D~vv~~GDl~~~~~~~------------~y~~~~~~l 67 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQ-LNALRERPDAVVVSGDIVNCGRPE------------EYQVARQIL 67 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHH-HHTCSSCCSEEEEESCCBSSCCHH------------HHHHHHHHH
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHH-HHhcCCCCCEEEECcccCcCCcch------------hHHHHHHHH
Confidence 7999999999976532 123457777743 443 5899999999999976532 244444444
Q ss_pred HHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCC
Q 006340 113 IKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLF 192 (649)
Q Consensus 113 ~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~ 192 (649)
.+ + +.|++.++||||... ...+.+..+... ...... ...+....+.+.+|++|+.... ...
T Consensus 68 ~~---l-~~p~~~i~GNHD~~~-----~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~i~ldt~~~~------~~~ 128 (271)
T d3d03a1 68 GS---L-NYPLYLIPGNHDDKA-----LFLEYLQPLCPQ--LGSDAN--NMRCAVDDFATRLLFIDSSRAG------TSK 128 (271)
T ss_dssp TT---C-SSCEEEECCTTSCHH-----HHHHHHGGGSGG--GCSCGG--GCCEEECSSSSEEEECCCCCTT------CSS
T ss_pred hc---c-CCCEEEEecCccchH-----HHHHHhhhhhhc--cccccC--cceEEEecCCeEEEecccccCC------CCc
Confidence 33 3 469999999999742 112222222111 111111 1223344567889999987532 234
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccC-------CCCchhHHHHHHHhC-CceEEEeCcccCCC
Q 006340 193 GHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSA-------SSHSGRSLQDIFLKH-SLSAYLCGHLHTRF 261 (649)
Q Consensus 193 G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~-------~~~~~~~l~~ll~~~-~v~l~L~GHtH~~~ 261 (649)
|.++++|++||+++|++.+ .+++|+++|+|+.... ...+++++.++++++ ++++++|||+|...
T Consensus 129 ~~l~~~ql~wL~~~L~~~~-----~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~ 200 (271)
T d3d03a1 129 GWLTDETISWLEAQLFEGG-----DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT 200 (271)
T ss_dssp BCCCHHHHHHHHHHHHHHT-----TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCE
T ss_pred ceecHHHHHHHHHHHhhhc-----cceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhh
Confidence 6789999999999998753 2478888888764311 123567899999998 49999999999764
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.85 E-value=1.4e-20 Score=195.70 Aligned_cols=196 Identities=17% Similarity=0.169 Sum_probs=123.5
Q ss_pred CCCCCceEEEEEcCCCCCCCCCCcHHHHHHHHHH-HHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 35 EGPEHVIWAVQLSDLHFSVHHPDRASDFKRIVGP-ALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 35 ~~p~~~~~fv~ISDlHls~~~~~~~~~l~~~i~~-~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
..|+.+++|+.++|++.+. +-.+.+.. .....+||+||++||++.+.... .....+|..+.+.++.+.
T Consensus 2 ~g~~~p~~F~v~GD~g~~~-------~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~----~~~~~~wd~~~~~~~~~~ 70 (312)
T d2qfra2 2 TGLDVPYTFGLIGDLGQSF-------DSNTTLSHYELSPKKGQTVLFVGDLSYADRYP----NHDNVRWDTWGRFTERSV 70 (312)
T ss_dssp CCSSCCEEEEEECSCCSBH-------HHHHHHHHHHHCSSCCSEEEECSCCCCGGGSG----GGCTHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEeeCCCCC-------chHHHHHHHHHcCCCCCEEEECCCCCcCCCCc----ccchHHHHHHHHHHHHHh
Confidence 3466789999999987543 11223322 24467899999999998543221 112345777777777764
Q ss_pred HhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCC---Cccc-eEEEEeCCeeEEEEEecCCCccCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRK---QNVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPT 189 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~---~~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~ 189 (649)
. ++|++.++||||....+... ....+..|...-.+... ...+ .|.++ .++++||++|+....
T Consensus 71 ~-----~~P~~~~~GNHD~~~~~~~~-~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~--~g~v~fi~Lds~~~~------ 136 (312)
T d2qfra2 71 A-----YQPWIWTAGNHEIEFAPEIN-ETEPFKPFSYRYHVPYEASQSTSPFWYSIK--RASAHIIVLSSYSAY------ 136 (312)
T ss_dssp T-----TSCEEECCCGGGTCCBGGGT-BCSTTHHHHHHCCCCGGGGTCSSTTSEEEE--ETTEEEEECCTTSCC------
T ss_pred h-----cceEEEeccccccccccccc-ccccccchhhhccCCccccCCCCCceEEEE--ECCEEEEEeeccccc------
Confidence 3 36999999999974322111 11112211100000000 0111 24554 457999999976532
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC---C---chhHHHHHHHhCCceEEEeCcccCCC
Q 006340 190 NLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS---H---SGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 190 ~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~---~---~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
....+|++||+++|+++++. +..++|+++|+|+...... + .++.+.++|.+++|+++||||.|..+
T Consensus 137 ----~~~~~Q~~WL~~~L~~~~~~--~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~Ye 208 (312)
T d2qfra2 137 ----GRGTPQYTWLKKELRKVKRS--ETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYE 208 (312)
T ss_dssp ----STTSHHHHHHHHHHHTCCTT--TCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEE
T ss_pred ----cchHHHHHHHHHHHHHHhhc--CCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceE
Confidence 23457999999999976532 3347999999999753211 1 23568899999999999999999887
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.82 E-value=7.3e-20 Score=184.59 Aligned_cols=204 Identities=16% Similarity=0.162 Sum_probs=123.2
Q ss_pred ceEEEEEcCCCCCCCCC-------------CcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHHP-------------DRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQ 106 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~-------------~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~ 106 (649)
.|+|++|||+|++.... .....+++++ +.+++.+||+||++||+++........ ..+.|+
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v-~~i~~~~~DfVv~~GDl~~~~~~~~~~------~~~~~~ 75 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAV-LQWRRERVQCVVQLGDIIDGHNRRRDA------SDRALD 75 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHH-HHHHHTTCSEEEECSCCBCTHHHHTTC------HHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHH-HHHhhCCCCEEEECCCCCCCCCcchhH------HHHHHH
Confidence 49999999999975421 0134567777 456788999999999999876432111 123455
Q ss_pred HHHHHHHHhcCCCCceEEEecCCCCCCCCCC-------CCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecC
Q 006340 107 NVMQDVIKRSGLEKSIFYDIRGNHDNFGVPI-------VGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDS 179 (649)
Q Consensus 107 ~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~-------~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~ 179 (649)
++.+.+.. + +.|++.++||||...... ......+...... ......... ..... .+.+.|+.+|.
T Consensus 76 ~~~~~~~~---~-~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~--~~~~~~~~~~~ 147 (320)
T d2nxfa1 76 TVMAELDA---C-SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGS-DLIGDDIYA-YEFSP--APNFRFVLLDA 147 (320)
T ss_dssp HHHHHHHT---T-CSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CE-ECGGGTCCC-EEEEE--ETTEEEEECCT
T ss_pred HHHHHHHH---c-CCCEEEecccCccccccchhcccccccchhhhcccccc-cccCCCCcc-ceeec--CCCeEEEEecC
Confidence 55555543 2 469999999999753211 0000001110000 000111111 12222 24577888876
Q ss_pred CCccCCCC------------------------------------CCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEE
Q 006340 180 TMSVGLRG------------------------------------PTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITF 223 (649)
Q Consensus 180 ~~~pG~~~------------------------------------p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf 223 (649)
........ .....+.+.++|++||+++|+++++ +..++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~---~~~~viv~ 224 (320)
T d2nxfa1 148 YDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH---KQERVLIF 224 (320)
T ss_dssp TSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH---HTCEEEEE
T ss_pred cccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh---cCCceEEE
Confidence 43211100 0112346789999999999987653 23589999
Q ss_pred EecCCCccC-----CCCchhHHHHHHHhCC-ceEEEeCcccCCC
Q 006340 224 GHFPVSFSA-----SSHSGRSLQDIFLKHS-LSAYLCGHLHTRF 261 (649)
Q Consensus 224 ~H~P~~~~~-----~~~~~~~l~~ll~~~~-v~l~L~GHtH~~~ 261 (649)
+|+|+.... ...+.+++.++|.+++ |+++||||+|...
T Consensus 225 ~H~p~~~~~~~~~~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~ 268 (320)
T d2nxfa1 225 SHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGG 268 (320)
T ss_dssp ESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCE
T ss_pred ECCCCccCCCCCccchhhHHHHHHHHHhCCCeeEEEeCCcCCcC
Confidence 999986421 1235678999999985 9999999999764
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.78 E-value=3.4e-19 Score=180.99 Aligned_cols=208 Identities=19% Similarity=0.211 Sum_probs=119.1
Q ss_pred CCCceEEEEEcCCCCCCCCCCcHHH---HHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHH-HHHHHHHH
Q 006340 37 PEHVIWAVQLSDLHFSVHHPDRASD---FKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWME-YQNVMQDV 112 (649)
Q Consensus 37 p~~~~~fv~ISDlHls~~~~~~~~~---l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~-Y~~vl~~L 112 (649)
|...+||++|+|+|.+...+..... ..+.+.+.+++.+|||||++||++....... +.+.+|+. +.+....+
T Consensus 1 p~~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~----~~~~~~~~~~~~~~~~~ 76 (302)
T d1utea_ 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHD----AKDKRFQETFEDVFSDP 76 (302)
T ss_dssp CCCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSS----TTCTHHHHHTTTTSCSG
T ss_pred CCCCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCc----ccHHHHHHHHHHHhhhh
Confidence 3456999999999987765322111 1223345566789999999999995432111 11122421 11111111
Q ss_pred HHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccc-eEEEEeCCeeEEEEEecCCCccCCCCCC--
Q 006340 113 IKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVN-SVTVQIGDEKHLFVGFDSTMSVGLRGPT-- 189 (649)
Q Consensus 113 ~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~-~~~~~~~~g~~~fIglD~~~~pG~~~p~-- 189 (649)
. ..++|++.++||||..+.. .....+..+.....+.. .... .+......+.+.|+.+|+.........+
T Consensus 77 ~----~~~~P~~~~~GNHD~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~ 148 (302)
T d1utea_ 77 S----LRNVPWHVLAGNHDHLGNV---SAQIAYSKISKRWNFPS-PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 148 (302)
T ss_dssp G----GTTCCEEECCCHHHHHSCH---HHHHHGGGTSTTEECCS-SSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred h----hcCCceEEeeccccccccc---ccccchhhccccccCCC-cccceeecccCCCCcEEEEEccceeEeeccccccc
Confidence 1 2357999999999975421 11112222211110111 0110 1112223568999999864321111000
Q ss_pred -----CCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCC----CchhHHHHHHHhCCceEEEeCcccCC
Q 006340 190 -----NLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASS----HSGRSLQDIFLKHSLSAYLCGHLHTR 260 (649)
Q Consensus 190 -----~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~----~~~~~l~~ll~~~~v~l~L~GHtH~~ 260 (649)
...+.+.++|++||+++|++.+ .+++|++.|+|....... .....+.++|++++|+++||||.|..
T Consensus 149 ~~~~~~~~~~~~~~Q~~WL~~~L~~~~-----~~~~iv~~h~~~~~~~~~~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~ 223 (302)
T d1utea_ 149 QQPERPRNLALARTQLAWIKKQLAAAK-----EDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNL 223 (302)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHCC-----CSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred ccccccccchhHHHHHHHHHHHHHhhc-----cCceEEEEeccccccCCCCCchhhhhhhhHHHHhcCceEEEeCCCcce
Confidence 0112345789999999999753 358899999987643211 12457889999999999999999987
Q ss_pred C
Q 006340 261 F 261 (649)
Q Consensus 261 ~ 261 (649)
+
T Consensus 224 ~ 224 (302)
T d1utea_ 224 Q 224 (302)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=1e-17 Score=162.63 Aligned_cols=186 Identities=10% Similarity=0.004 Sum_probs=115.3
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
..+|+.+||+|-. .+.|++++ +.++..+||+|+++|||++.+.... + +..+++.+.+.
T Consensus 5 ~~~i~~~sd~hg~------~eale~~~-~~~~~~~~D~vv~~GDl~~~~~~~~--------~---~~~~~~~L~~~---- 62 (228)
T d1uf3a_ 5 VRYILATSNPMGD------LEALEKFV-KLAPDTGADAIALIGNLMPKAAKSR--------D---YAAFFRILSEA---- 62 (228)
T ss_dssp CCEEEEEECCTTC------HHHHHHHH-THHHHHTCSEEEEESCSSCTTCCHH--------H---HHHHHHHHGGG----
T ss_pred ccEEEEEeCCCCC------HHHHHHHH-HHHhhcCCCEEEECCCCCCCCccch--------H---HHHhhhhhccc----
Confidence 4589999999954 35788888 5566789999999999999876432 1 23445555442
Q ss_pred CceEEEecCCCCCCCCCCCCCchhhhcccccccccCC-CCccceEEEEeCCeeEEEEEecCCCccCCCCCCCCCCCCCHH
Q 006340 120 KSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGR-KQNVNSVTVQIGDEKHLFVGFDSTMSVGLRGPTNLFGHPADQ 198 (649)
Q Consensus 120 ~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~-~~~~~~~~~~~~~g~~~fIglD~~~~pG~~~p~~~~G~l~~~ 198 (649)
+.|++.|+||||..... .....+........ .......... .+.+.+++++..............+....+
T Consensus 63 ~~pv~~i~GNHD~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T d1uf3a_ 63 HLPTAYVPGPQDAPIWE------YLREAANVELVHPEMRNVHETFTFW--RGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp CSCEEEECCTTSCSHHH------HHHHHHHHHHHCTTEEECBTSEEEE--TTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred cceEEEEecCCCchhhh------hhhhhcccccccccccccceeeeec--cCCEEEEecCCccccCcCcchhhhhhhhHH
Confidence 35999999999974210 01111100000000 0000012222 345777777755432222222234456678
Q ss_pred HHHHHHHHHhcccccCCCCceEEEEEecCCCccCC-CCchhHHHHHHHhCCceEEEeCcccCC
Q 006340 199 LLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS-SHSGRSLQDIFLKHSLSAYLCGHLHTR 260 (649)
Q Consensus 199 qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~-~~~~~~l~~ll~~~~v~l~L~GHtH~~ 260 (649)
+++|+++.+++.. ..+.|+++|+|+..... ..+...+.++++++++++++|||+|..
T Consensus 135 ~~~~l~~~l~~~~-----~~~~il~~H~p~~~~~~~~~~~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 135 VAEYRLKALWELK-----DYPKIFLFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp HHHHHHGGGGGSC-----SCCEEEEESSCBCBTTTBTTSBHHHHHHHHHHCCSEEEECCSSCE
T ss_pred HHHHHHHHHhhcc-----CCceEEEEeeeccCccccccccHHHHHHHHhcCCcEEEEcccccc
Confidence 8899988877542 34789999998764221 234467899999999999999999954
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.72 E-value=7.5e-17 Score=158.80 Aligned_cols=194 Identities=8% Similarity=0.032 Sum_probs=109.8
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhh---------------hhhHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMK---------------QNEVEWMEY 105 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~---------------Q~e~eW~~Y 105 (649)
.||++|||+|... +.+++++ +.+++.+||+||++|||+|.......... ....+-+.+
T Consensus 3 ~ri~~isD~h~~~------~~l~~l~-~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~ 75 (257)
T d2yvta1 3 RKVLAIKNFKERF------DLLPKLK-GVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 75 (257)
T ss_dssp CEEEEEECCTTCG------GGHHHHH-HHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCH------HHHHHHH-HHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhH
Confidence 5999999999532 3467777 55677899999999999997653211000 001122356
Q ss_pred HHHHHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccccccCCCCccceEEEEeCCeeEEEEEecCCCccCC
Q 006340 106 QNVMQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSINGQLGRKQNVNSVTVQIGDEKHLFVGFDSTMSVGL 185 (649)
Q Consensus 106 ~~vl~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~~~l~~~~~~~~~~~~~~~g~~~fIglD~~~~pG~ 185 (649)
..+++.+.+. ++|+|.++||||.... ......+................... .+++.+++++....+++
T Consensus 76 ~~~~~~L~~~----~~pv~~i~GNHD~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 144 (257)
T d2yvta1 76 DKFFREIGEL----GVKTFVVPGKNDAPLK------IFLRAAYEAETAYPNIRVLHEGFAGW-RGEFEVIGFGGLLTEHE 144 (257)
T ss_dssp HHHHHHHHTT----CSEEEEECCTTSCCHH------HHHHHHHHTTTTCTTEEECSSEEEEE-TTTEEEEEECSEEESSC
T ss_pred HHHHHHHHhc----CCcEEEEeCCCcchhh------HHHHHhccccccccccccccceeEEe-cCCeEEEEeccccCCcc
Confidence 6677777652 4699999999997421 01111111000000000011111222 34577777765543322
Q ss_pred CCCCCCCCCC--CHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC--------CCchhHHHHHHHhCCceEEEeC
Q 006340 186 RGPTNLFGHP--ADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS--------SHSGRSLQDIFLKHSLSAYLCG 255 (649)
Q Consensus 186 ~~p~~~~G~l--~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~--------~~~~~~l~~ll~~~~v~l~L~G 255 (649)
. ...+.. .+.+.++++..+++. +..++|+++|+|+..... .....++.++++++++++++||
T Consensus 145 ~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~G 216 (257)
T d2yvta1 145 F---EEDFVLKYPRWYVEYILKFVNEL-----KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVG 216 (257)
T ss_dssp C---BSSSSCEEEHHHHHHHGGGGGGS-----CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEEC
T ss_pred c---cchhhhhhhhhHHHHHHHHhhhc-----ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEE
Confidence 1 112222 233333444433322 345899999998753211 1234679999999999999999
Q ss_pred cccCC
Q 006340 256 HLHTR 260 (649)
Q Consensus 256 HtH~~ 260 (649)
|+|..
T Consensus 217 HiH~~ 221 (257)
T d2yvta1 217 HVGKG 221 (257)
T ss_dssp SSCCE
T ss_pred eecCC
Confidence 99964
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.42 E-value=6.2e-13 Score=135.52 Aligned_cols=82 Identities=21% Similarity=0.265 Sum_probs=55.9
Q ss_pred eEEEEEcCCCCCCCCC---CcH----HHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHHP---DRA----SDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVI 113 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~---~~~----~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~ 113 (649)
|||+|+||+|++.... .+. ..|++++ +.+...+||+|+++|||+|....+.. ....+.+.++.+.
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv-~~a~~~~~D~vli~GDlfd~~~~~~~-------~~~~~~~~~~~l~ 72 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNAL-EIAVQENVDFILIAGDLFHSSRPSPG-------TLKKAIALLQIPK 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHH-HHHHHTTCSEEEEESCSBSSSSCCHH-------HHHHHHHHHHHHH
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHH-HHHHHcCCCEEEECCCCCCCCCCCHH-------HHHHHHHHHhhHH
Confidence 7999999999986531 222 2345555 33446799999999999997654321 1223445666665
Q ss_pred HhcCCCCceEEEecCCCCCCC
Q 006340 114 KRSGLEKSIFYDIRGNHDNFG 134 (649)
Q Consensus 114 ~~~~l~~~p~~~I~GNHD~~~ 134 (649)
. .++|++.++||||...
T Consensus 73 ~----~~i~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 73 E----HSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp T----TTCCEEEECCTTTCCS
T ss_pred h----cCCcEEEeCCCCcccc
Confidence 3 2579999999999753
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.11 E-value=6.3e-12 Score=123.10 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=46.7
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHh-----ccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHh
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALS-----MISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKR 115 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~-----~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~ 115 (649)
++|++|||+|- +...|+++++. ++ ..++|.++++|||+|.+..... .+ +.+.++.+
T Consensus 1 v~I~visDiHg------~~~~l~~~l~~-i~~~~~~~~~~D~ii~~GDlvd~G~~~~e----------vi-~~l~~l~~- 61 (251)
T d1nnwa_ 1 VYVAVLANIAG------NLPALTAALSR-IEEMREEGYEIEKYYILGNIVGLFPYPKE----------VI-EVIKDLTK- 61 (251)
T ss_dssp CEEEEEECCTT------CHHHHHHHHHH-HHHHHHTTCCEEEEEEESCSSSSSSCHHH----------HH-HHHHHHHH-
T ss_pred CEEEEEEcccc------CHHHHHHHHHH-HHHhhccCCCCcEEEEecCcCCCCCCcHH----------HH-HHHHHHhh-
Confidence 47999999992 23467777743 32 2356999999999998764221 11 23444432
Q ss_pred cCCCCceEEEecCCCCCC
Q 006340 116 SGLEKSIFYDIRGNHDNF 133 (649)
Q Consensus 116 ~~l~~~p~~~I~GNHD~~ 133 (649)
+.+++.|+||||..
T Consensus 62 ----~~~v~~v~GNHD~~ 75 (251)
T d1nnwa_ 62 ----KENVKIIRGKYDQI 75 (251)
T ss_dssp ----HSCEEEECCHHHHH
T ss_pred ----cCCEEEEeccHHHH
Confidence 23789999999964
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.09 E-value=1.5e-09 Score=102.86 Aligned_cols=66 Identities=20% Similarity=0.192 Sum_probs=43.8
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||++.|||+|...... .+.+.+.+.++..++|.|+++||+++ . +.++.+++..
T Consensus 1 MkI~viSD~H~~~~~~----~l~~~~~~~~~~~~~D~Ii~~GDi~~---~----------------e~l~~l~~~~---- 53 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCN----SLPAKFKKLLVPGKIQHILCTGNLCT---K----------------ESYDYLKTLA---- 53 (182)
T ss_dssp CEEEEECCCCBTTTCS----SCCHHHHTTCCTTSCSEEEECSCCBS---H----------------HHHHHHHHHC----
T ss_pred CEEEEEeecCCCCcch----hhHHHHHHHhcccCCCEEEEccCccc---h----------------hhHHHHHhhC----
Confidence 7999999999754321 12233334445568999999999985 1 2333343321
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
.+++.|+||||..
T Consensus 54 ~~v~~V~GN~D~~ 66 (182)
T d1z2wa1 54 GDVHIVRGDFDEN 66 (182)
T ss_dssp SEEEECCCTTCCC
T ss_pred CceEEEeCCcCcc
Confidence 3899999999974
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.08 E-value=2.9e-09 Score=101.73 Aligned_cols=65 Identities=18% Similarity=0.281 Sum_probs=41.5
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCc
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKS 121 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~ 121 (649)
-|+.|||+|......+-.+.+. +.++..++|.|+++||+++. ++++.+++.. .
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~----~~~~~~~vD~ii~~GDi~~~-------------------~~l~~l~~l~----~ 57 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFR----ELLATDKINYVLCTGNVCSQ-------------------EYVEMLKNIT----K 57 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGH----HHHHCTTCCEEEECSCCCCH-------------------HHHHHHHHHC----S
T ss_pred EEEEEeCCCCCcccchhhHHHH----HHhccCCCCEEEECCCCCCH-------------------HHHHHHHhhC----C
Confidence 4789999997432211111222 33456789999999999852 2344444321 2
Q ss_pred eEEEecCCCCCC
Q 006340 122 IFYDIRGNHDNF 133 (649)
Q Consensus 122 p~~~I~GNHD~~ 133 (649)
+++.|+||||..
T Consensus 58 ~v~~V~GN~D~~ 69 (193)
T d2a22a1 58 NVYIVSGDLDSA 69 (193)
T ss_dssp CEEECCCTTCCS
T ss_pred CEEEEcCCCCcc
Confidence 789999999975
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.94 E-value=5e-09 Score=97.21 Aligned_cols=63 Identities=17% Similarity=0.208 Sum_probs=47.3
Q ss_pred eEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 41 IWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 41 ~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
||++.|||+|- +...+++++ +.++..+||.|+++||+++.. .++.+.. + .
T Consensus 1 MkI~iiSDiHg------n~~al~~vl-~~~~~~~~D~ii~~GD~~~~~-------------------~~~~l~~---~-~ 50 (165)
T d1s3la_ 1 MKIGIMSDTHD------HLPNIRKAI-EIFNDENVETVIHCGDFVSLF-------------------VIKEFEN---L-N 50 (165)
T ss_dssp CEEEEECCCTT------CHHHHHHHH-HHHHHSCCSEEEECSCCCSTH-------------------HHHHGGG---C-S
T ss_pred CEEEEEEeCCC------CHHHHHHHH-HHHHhcCCCEEEECCCccCHH-------------------HHHHHhh---c-C
Confidence 79999999993 345788888 556778999999999998532 2233332 2 3
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
.|++.+.||||..
T Consensus 51 ~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 51 ANIIATYGNNDGE 63 (165)
T ss_dssp SEEEEECCTTCCC
T ss_pred ccEEEEccccccc
Confidence 5999999999974
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.83 E-value=6e-08 Score=90.77 Aligned_cols=59 Identities=17% Similarity=0.108 Sum_probs=42.4
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
..||+.|||+|.. ...+++++. .. ..++|.|+++||++....... .
T Consensus 3 ~~kI~viSD~Hgn------~~al~~vl~-~~-~~~~D~iih~GD~~~~~~~~~-------------------------~- 48 (173)
T d3ck2a1 3 KQTIIVMSDSHGD------SLIVEEVRD-RY-VGKVDAVFHNGDSELRPDSPL-------------------------W- 48 (173)
T ss_dssp CEEEEEECCCTTC------HHHHHHHHH-HH-TTTSSEEEECSCCCSCTTCGG-------------------------G-
T ss_pred CCEEEEEeccCCC------HHHHHHHHH-Hh-hcCCCEEEECCcccCcccchh-------------------------h-
Confidence 5799999999942 346777773 33 347999999999876543210 1
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
.++..|+||||..
T Consensus 49 -~~~~~V~GN~D~~ 61 (173)
T d3ck2a1 49 -EGIRVVKGNMDFY 61 (173)
T ss_dssp -TTEEECCCTTCCS
T ss_pred -cCCeEEecCcccc
Confidence 2688899999974
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.59 E-value=2.1e-07 Score=88.22 Aligned_cols=43 Identities=19% Similarity=0.442 Sum_probs=31.9
Q ss_pred eEEEEEecCCCccCC---CCchhHHHHHHHhCCceEEEeCcccCCC
Q 006340 219 TKITFGHFPVSFSAS---SHSGRSLQDIFLKHSLSAYLCGHLHTRF 261 (649)
Q Consensus 219 ~~Ilf~H~P~~~~~~---~~~~~~l~~ll~~~~v~l~L~GHtH~~~ 261 (649)
..|+++|+|+..... ......+.+...+++.++.|+||+|...
T Consensus 107 ~~i~l~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 107 KRILLSHYPAKDPITERYPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEEESSCSSCSSCCSCHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred eEEEEEeCCCccccccccccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 569999999864221 1223467788888999999999999764
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=2.3e-06 Score=88.10 Aligned_cols=199 Identities=16% Similarity=0.099 Sum_probs=95.1
Q ss_pred ceEEEEEcCCCCCCCC----CCcHHHHHHHHHH---HHhccCCc-EEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHH
Q 006340 40 VIWAVQLSDLHFSVHH----PDRASDFKRIVGP---ALSMISPS-LVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQD 111 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~----~~~~~~l~~~i~~---~l~~~kPD-~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~ 111 (649)
.++|+|++|+|-.-.. ......+..+++. ..++.+|+ +++-.||++........ .+ .+ ..++.
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~--~~----g~---~~~~~ 78 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDL--QD----AE---PDFRG 78 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHT--TT----TH---HHHHH
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHH--hC----Ch---HHHHH
Confidence 3789999999942211 1123344444432 22345666 55559999865322110 00 11 23333
Q ss_pred HHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhcccccc------------cccCCCCccceEEEEeCCeeEEEEEecC
Q 006340 112 VIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKHSIN------------GQLGRKQNVNSVTVQIGDEKHLFVGFDS 179 (649)
Q Consensus 112 L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~ys~~------------~~l~~~~~~~~~~~~~~~g~~~fIglD~ 179 (649)
++.. + .=..+.||||... + .+.+.+.... ...+.........++.++-++.+||+-+
T Consensus 79 mn~~-g----~Da~~~GNHEfd~-----G-~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~ 147 (337)
T d1usha2 79 MNLV-G----YDAMAIGNHEFDN-----P-LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTT 147 (337)
T ss_dssp HHHH-T----CCEEECCGGGGSS-----C-HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc-C----CeEEEechhhhcc-----c-hHHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccc
Confidence 3331 1 2245789999742 1 1222221100 0000011111345677888999999954
Q ss_pred CCccCCCCCCCCCCC-C-C-HHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCC-CC---chhHHHHHHHhCCceEE
Q 006340 180 TMSVGLRGPTNLFGH-P-A-DQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSAS-SH---SGRSLQDIFLKHSLSAY 252 (649)
Q Consensus 180 ~~~pG~~~p~~~~G~-l-~-~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~-~~---~~~~l~~ll~~~~v~l~ 252 (649)
...+....|.+..|. + + .+.++...++|++.+ +.+.+|+++|.+...... .. ...++...+...+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~----~~D~iI~lsH~G~~~d~~~~~~~~~~~~la~~~~~~~vD~I 223 (337)
T d1usha2 148 DDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTE----KPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMI 223 (337)
T ss_dssp TTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHHT----CCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEE
T ss_pred cccccccCcccccCcccccHHHHHHHHHHHHhhcc----CCCEEEEecccCcccccccccccchhHHHHHhCcccCceEE
Confidence 333322222112221 1 1 122333333343221 346899999988653211 11 11233333333469999
Q ss_pred EeCcccCCCC
Q 006340 253 LCGHLHTRFG 262 (649)
Q Consensus 253 L~GHtH~~~g 262 (649)
+.||+|....
T Consensus 224 vgGHsH~~~~ 233 (337)
T d1usha2 224 VGGHSQDPVC 233 (337)
T ss_dssp ECCSSCCBCC
T ss_pred ecCccCcccc
Confidence 9999998763
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.31 E-value=4.9e-07 Score=84.17 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=52.2
Q ss_pred ceEEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 40 VIWAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 40 ~~~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
+||+++|||+|. +.+.+++++ +.++..++|.++++||+++.+.......... -+.+++.+.. .
T Consensus 1 mMki~iiSDiHg------~~~al~~vl-~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~------~~~~~~~~~~---~- 63 (184)
T d1su1a_ 1 MMKLMFASDIHG------SLPATERVL-ELFAQSGAQWLVILGDVLNHGPRNALPEGYA------PAKVVERLNE---V- 63 (184)
T ss_dssp CCEEEEECCCTT------BHHHHHHHH-HHHHHHTCSEEEECSCCSCCCTTSCCCTTBC------HHHHHHHHHT---T-
T ss_pred CcEEEEEeecCC------CHHHHHHHH-HHHhhcCCCEEEEcCcccccCccchhhhccC------cHHHHHHHHh---c-
Confidence 589999999993 234678887 5566779999999999998765322111110 1134444443 2
Q ss_pred CceEEEecCCCCCC
Q 006340 120 KSIFYDIRGNHDNF 133 (649)
Q Consensus 120 ~~p~~~I~GNHD~~ 133 (649)
+.+++.++||||..
T Consensus 64 ~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 64 AHKVIAVRGNCDSE 77 (184)
T ss_dssp GGGEEECCCTTCCH
T ss_pred CCcEEEecCCCCch
Confidence 34899999999974
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.80 E-value=4.3e-05 Score=77.81 Aligned_cols=58 Identities=19% Similarity=0.093 Sum_probs=34.9
Q ss_pred EeCCCCCCceEEEEEcCCCCCCCC--C-----CcH---HHHHHHHHHHHhccCCc-EEEEcCCCCCCCC
Q 006340 32 QLREGPEHVIWAVQLSDLHFSVHH--P-----DRA---SDFKRIVGPALSMISPS-LVLITGDLTDGKS 89 (649)
Q Consensus 32 ~~~~~p~~~~~fv~ISDlHls~~~--~-----~~~---~~l~~~i~~~l~~~kPD-~VIitGDLtd~~~ 89 (649)
+.+..|-+.++|+|.+|+|-.-.. . ... ..+.+.+++..++.+++ +++-+||+++...
T Consensus 3 ~~~~l~~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~ 71 (322)
T d3c9fa2 3 PHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNG 71 (322)
T ss_dssp CBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCH
T ss_pred CCCCCCcCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCc
Confidence 344566678999999999953221 1 111 22333443434455677 5567999998653
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.52 E-value=0.0013 Score=65.75 Aligned_cols=187 Identities=14% Similarity=0.084 Sum_probs=93.9
Q ss_pred eEEEEEcCCCCCCCC-------C----CcHHHHHHHHHHHHhccCC-cEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHH
Q 006340 41 IWAVQLSDLHFSVHH-------P----DRASDFKRIVGPALSMISP-SLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNV 108 (649)
Q Consensus 41 ~~fv~ISDlHls~~~-------~----~~~~~l~~~i~~~l~~~kP-D~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~v 108 (649)
++|+|.+|+|-.-.. + .-..++...+++ +++..| -+++-+||++........ .+-+ ..
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~-~r~~~~~~l~ldaGD~~~Gs~~~~~--~~g~-------~~ 72 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDR-VWARAKNPLFLDAGDVFQGTLYFNQ--YRGL-------AD 72 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHH-HHHHSSSEEEEECSCCSSSSHHHHH--HTTH-------HH
T ss_pred EEEEEEcccccCcccccccccCCccccCcHHHHHHHHHH-HHHhCCCeEEEEcCCCCCCCHhHhh--hcch-------hH
Confidence 689999999943211 0 124567777744 444344 588899999976532111 0111 22
Q ss_pred HHHHHHhcCCCCceEEEecCCCCCCCCCCCCCchhhhccc---------ccc----cccCCCCccc-eEEEEeCCeeEEE
Q 006340 109 MQDVIKRSGLEKSIFYDIRGNHDNFGVPIVGGSFDFFSKH---------SIN----GQLGRKQNVN-SVTVQIGDEKHLF 174 (649)
Q Consensus 109 l~~L~~~~~l~~~p~~~I~GNHD~~~v~~~~~~~~~~~~y---------s~~----~~l~~~~~~~-~~~~~~~~g~~~f 174 (649)
++.++. +. .=..++||||... + .+.+.++ +.+ ........+. ....+.++-++.|
T Consensus 73 ~~~~n~---~g--yDa~~~GNHEfd~-----G-~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgi 141 (302)
T d2z1aa2 73 RYFMHR---LR--YRAMALGNHEFDL-----G-PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGI 141 (302)
T ss_dssp HHHHHH---TT--CCEEECCGGGGTT-----C-HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEE
T ss_pred HHHHHh---cc--cccccccchhhhc-----C-hhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEE
Confidence 333332 21 3466999999742 1 1112111 000 0000111122 3456678889999
Q ss_pred EEecCCCccCCCCCCCCCCCCCHHHHHHHHHHHhcccccCCCCceEEEEEecCCCccCCCCchhHHHHHHHhC-CceEEE
Q 006340 175 VGFDSTMSVGLRGPTNLFGHPADQLLTEIDSELSQWNSQSTKPVTKITFGHFPVSFSASSHSGRSLQDIFLKH-SLSAYL 253 (649)
Q Consensus 175 IglD~~~~pG~~~p~~~~G~l~~~qL~wL~~~L~~~~~~~~~~~~~Ilf~H~P~~~~~~~~~~~~l~~ll~~~-~v~l~L 253 (649)
||+-+...+....|....-..++ .+.+++..++.+++ +...+|++.|-... +-.++.++. ++++++
T Consensus 142 iG~~t~~~~~~~~~~~~~~~~d~--~~~~~~~~~~l~~~--~~DiiV~l~H~g~~---------~d~~la~~~~giD~ii 208 (302)
T d2z1aa2 142 IGLTTPDTREISNPGPTVAFLDP--YESAQKAVYELLAK--GVNKIVVLSHLGYG---------EDLKLARRLVGVQVIV 208 (302)
T ss_dssp EEEECTTHHHHSCCCTTCEECCH--HHHHHHHHHHHHHT--TCCCEEEEEESCHH---------HHHHHHTTCSSCCEEE
T ss_pred EecccccccccccccCcccccCH--HHHHHHHHHHhhcc--CCCEEEEeeccCcc---------hhhHHHhcCCCeeeee
Confidence 99854332221122111111222 22333333333221 33589999997532 112333443 499999
Q ss_pred eCcccCCC
Q 006340 254 CGHLHTRF 261 (649)
Q Consensus 254 ~GHtH~~~ 261 (649)
+||+|...
T Consensus 209 ~gh~h~~~ 216 (302)
T d2z1aa2 209 GGHSHTLL 216 (302)
T ss_dssp ECSSCCCB
T ss_pred cCccceee
Confidence 99999865
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.41 E-value=4.2e-05 Score=72.71 Aligned_cols=65 Identities=20% Similarity=0.368 Sum_probs=47.1
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhc-cCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCC
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSM-ISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEK 120 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~-~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~ 120 (649)
|+..|||+|-. .+.|++++ +.++. .+.|.++++||++|.+.... ++++.+. +
T Consensus 14 rI~vIgDIHG~------~~~L~~lL-~~i~~~~~~d~lv~lGD~vDrGp~s~--------------~vl~~l~------~ 66 (219)
T d1g5ba_ 14 NIWVVGDLHGC------YTNLMNKL-DTIGFDNKKDLLISVGDLVDRGAENV--------------ECLELIT------F 66 (219)
T ss_dssp CEEEECCCTTC------HHHHHHHH-HHHTCCTTTCEEEECSCCSSSSSCHH--------------HHHGGGG------S
T ss_pred eEEEEEecccC------HHHHHHHH-HHcCCCCCCCEEEEeCCccccCccHH--------------HHHHHhh------c
Confidence 78999999943 35788888 44543 45689999999999987642 3444332 2
Q ss_pred ceEEEecCCCCCC
Q 006340 121 SIFYDIRGNHDNF 133 (649)
Q Consensus 121 ~p~~~I~GNHD~~ 133 (649)
..+..|+||||..
T Consensus 67 ~~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 67 PWFRAVRGNHEQM 79 (219)
T ss_dssp TTEEECCCHHHHH
T ss_pred cccccccCcHHHH
Confidence 3688999999964
|
| >d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: Molybdenum-containing oxidoreductases-like dimerisation domain domain: Sulfite oxidase, C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.49 E-value=0.001 Score=57.79 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=49.7
Q ss_pred cEEEEEEeC--CCCeEEEEEEeCCc-CCCchhhHHhhhccccCCCCCCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCC
Q 006340 377 TIRALVFSV--SPILSVVAKVYDSR-SGKHDLVMEELMRKRTDNSSRGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGR 453 (649)
Q Consensus 377 ~IrvlvFs~--s~~~~V~v~id~~~-~~~~~~~~e~~~~~~~~~~~~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~ 453 (649)
.|+=.+||+ ..|.+|+|++||+. |..+++..+..+. ++.-+=-+|.+.|.+. .+ ..|+|.++|+|..|+
T Consensus 23 ~v~G~A~sggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~---~~~~~W~~W~~~~~~~---~~--~~~~i~~RA~D~~G~ 94 (123)
T d2a9da1 23 TVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKAPP---GRAWAWALWELTVPVE---AG--TELEIVCKAVDSSYN 94 (123)
T ss_dssp EEEEEEECSTTCCEEEEEEESBSSSSCEECEECSCCCCT---TCCCSCEEEEEEEEEC---TT--CEEEEEEEEEETTCC
T ss_pred EEEEEEEcCCCceEEEEEEEcCCCCccEEeEecCccCCC---CceeEEEEEEEEEEcC---CC--CeEEEEEEEEcCCCC
Confidence 688899975 46999999999886 9877554322111 1112235788998553 33 234899999999999
Q ss_pred cee
Q 006340 454 LSS 456 (649)
Q Consensus 454 ~~~ 456 (649)
+.-
T Consensus 95 ~QP 97 (123)
T d2a9da1 95 VQP 97 (123)
T ss_dssp BCC
T ss_pred cCC
Confidence 874
|
| >d1ogpa1 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: Molybdenum-containing oxidoreductases-like dimerisation domain domain: Sulfite oxidase, C-terminal domain species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.02 E-value=0.0071 Score=52.55 Aligned_cols=90 Identities=11% Similarity=-0.005 Sum_probs=55.1
Q ss_pred EEeecCCCCccccccccccccccccccccccccEEEEEEeC--CCCeEEEEEEeCCc-CCCchhhHHhhhccccCCCC--
Q 006340 345 IVVPTFPLDSRFMSRSSSQKYECEHMVAQSYATIRALVFSV--SPILSVVAKVYDSR-SGKHDLVMEELMRKRTDNSS-- 419 (649)
Q Consensus 345 ~iliT~P~~~~~~~~~~~~~~~~~~~~~~~~~~IrvlvFs~--s~~~~V~v~id~~~-~~~~~~~~e~~~~~~~~~~~-- 419 (649)
.-.||+|.+..-... . . -.|+=.+||+ .+|.+|+|++||+. |.++++....+.... .+..
T Consensus 5 ~S~I~~P~~~~~v~~---------g---~--~~i~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~-~~~~~~ 69 (127)
T d1ogpa1 5 QSAICSVEDVQMVKP---------G---K--VSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYI-SEHSSS 69 (127)
T ss_dssp EEEECSSCSEEEECS---------E---E--EEEEEEEECSTTCCEEEEEEESSTTSSCEECEEESSSSSCCC-SSSTTS
T ss_pred CEEEecCCCCCEecC---------c---e--EEEEEEEEcCCCceEEEEEEEeCCCCccEEeeccCCcccccc-ccccCC
Confidence 356889987642110 1 1 1688999985 47999999999875 988765443322110 0111
Q ss_pred ---CCCeeeeccCCCCCCCCCCCceEEEEEEEeCCCCcee
Q 006340 420 ---RGDLYAAPWNYRAFEDSSPQRFWLEIEVTDIMGRLSS 456 (649)
Q Consensus 420 ---~~~l~~~~w~~~~~~~g~h~~~~i~V~~~D~~G~~~~ 456 (649)
.=-+|..+++ ..|.+ .|.++|+|..|++.-
T Consensus 70 ~~w~W~~~~~~~~----~~g~~---~i~~RA~D~~g~~QP 102 (127)
T d1ogpa1 70 DKWAWVLFEATID----VSQTT---EVIAKAVDSAANVQP 102 (127)
T ss_dssp CTTSCEEEEEEEE----ESSCE---EEEEEEEETTCCBCC
T ss_pred cccEEEEEEEEec----CCCce---EEEEEEECCCCCCCC
Confidence 1134444441 13555 799999999998763
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.18 E-value=0.054 Score=53.25 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=43.9
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
++.++|+|-.- .+|.++++. .....-.-.+..||.+|.+....+. . ..+-.++- +-...
T Consensus 47 v~VvGDlHG~~------~DL~~if~~-~g~p~~~~ylFLGDYVDRG~~slEv----------l-~lL~alKi---~~P~~ 105 (288)
T d3c5wc1 47 VTVCGDVHGQF------HDLMELFRI-GGKSPDTNYLFMGDYVDRGYYSVET----------V-TLLVALKV---RYRER 105 (288)
T ss_dssp EEEECBCTTCH------HHHHHHHHH-HCCTTTSCEEECSCCCCSSSSHHHH----------H-HHHHHHHH---HCTTT
T ss_pred eEEEeeCCCCH------HHHHHHHHh-cCCCccceEEecCcccCCCCcceeH----------H-HHHHHHHh---hCCCe
Confidence 89999999543 467777632 2222224588899999998864321 1 11222221 12247
Q ss_pred EEEecCCCCCCC
Q 006340 123 FYDIRGNHDNFG 134 (649)
Q Consensus 123 ~~~I~GNHD~~~ 134 (649)
++.++|||+...
T Consensus 106 v~lLRGNHE~~~ 117 (288)
T d3c5wc1 106 ITILRGNHESRQ 117 (288)
T ss_dssp EEECCCTTSSHH
T ss_pred EEEeccCCcccc
Confidence 999999999853
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=92.90 E-value=0.061 Score=53.01 Aligned_cols=71 Identities=23% Similarity=0.228 Sum_probs=43.8
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
+..++|+|-.- .+|.+++ +........-.+++||.+|.+....+. . -.+-.++-. -...
T Consensus 54 v~VvGDiHG~~------~DL~~if-~~~g~p~~~~ylFLGDYVDRG~~slE~----------i-~lL~aLKi~---~P~~ 112 (294)
T d1jk7a_ 54 LKICGDIHGQY------YDLLRLF-EYGGFPPESNYLFLGDYVDRGKQSLET----------I-CLLLAYKIK---YPEN 112 (294)
T ss_dssp EEEECBCTTCH------HHHHHHH-HHHCCTTSSCEEECSCCSSSSSCHHHH----------H-HHHHHHHHH---STTT
T ss_pred eEEEEECCCCh------HhHHHHH-hhcCCCccceEEeeccccCCCccchHH----------H-HHHHHHHhh---CCCe
Confidence 79999999542 4666666 322222224578899999998764321 1 112222222 2247
Q ss_pred EEEecCCCCCCC
Q 006340 123 FYDIRGNHDNFG 134 (649)
Q Consensus 123 ~~~I~GNHD~~~ 134 (649)
++.++|||+...
T Consensus 113 v~lLRGNHE~~~ 124 (294)
T d1jk7a_ 113 FFLLRGNHECAS 124 (294)
T ss_dssp EEECCCTTSSHH
T ss_pred EEEecCCccccc
Confidence 999999999854
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.30 E-value=0.082 Score=52.72 Aligned_cols=71 Identities=18% Similarity=0.136 Sum_probs=43.6
Q ss_pred EEEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCc--EEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCC
Q 006340 42 WAVQLSDLHFSVHHPDRASDFKRIVGPALSMISPS--LVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLE 119 (649)
Q Consensus 42 ~fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD--~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~ 119 (649)
.+++++|+|-.- .+|.++++. ....|+ -.+++||.+|.+....+. .- ++=.++-. -
T Consensus 61 pv~VvGDiHGq~------~DL~~if~~--~g~p~~~~~ylFLGDYVDRG~~slEv----------i~-lL~~lKi~---y 118 (324)
T d1s95a_ 61 KITVCGDTHGQF------YDLLNIFEL--NGLPSETNPYIFNGDFVDRGSFSVEV----------IL-TLFGFKLL---Y 118 (324)
T ss_dssp EEEEECCCTTCH------HHHHHHHHH--HCCCBTTBCEEEESCCSSSSTTHHHH----------HH-HHHHHHHH---S
T ss_pred CEEEEEECCCCH------HHHHHHHHH--CCCCCCCCeEEEecccccCcCcceee----------hH-HHHHHHHh---C
Confidence 678899999542 456666622 233332 479999999998764321 11 12222221 1
Q ss_pred CceEEEecCCCCCCC
Q 006340 120 KSIFYDIRGNHDNFG 134 (649)
Q Consensus 120 ~~p~~~I~GNHD~~~ 134 (649)
...++.++|||+...
T Consensus 119 P~~v~LLRGNHE~~~ 133 (324)
T d1s95a_ 119 PDHFHLLRGNHETDN 133 (324)
T ss_dssp TTTEEEECCTTSSHH
T ss_pred CCcEEeccCCccccc
Confidence 247999999999853
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.80 E-value=0.095 Score=54.65 Aligned_cols=70 Identities=16% Similarity=0.146 Sum_probs=42.3
Q ss_pred EEEEcCCCCCCCCCCcHHHHHHHHHHHHhccCCcEEEEcCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHhcCCCCce
Q 006340 43 AVQLSDLHFSVHHPDRASDFKRIVGPALSMISPSLVLITGDLTDGKSKDLLTMKQNEVEWMEYQNVMQDVIKRSGLEKSI 122 (649)
Q Consensus 43 fv~ISDlHls~~~~~~~~~l~~~i~~~l~~~kPD~VIitGDLtd~~~~~~~~s~Q~e~eW~~Y~~vl~~L~~~~~l~~~p 122 (649)
+.+++|+|-.- .+|.+++ +......-.-.+++||.+|.+....+.- -.+-.++-. -...
T Consensus 72 v~VvGDIHGq~------~DLl~If-~~~G~P~~~~yLFLGDYVDRG~~SlEvl-----------llL~aLKi~---yP~~ 130 (473)
T d1auia_ 72 VTVCGDIHGQF------FDLMKLF-EVGGSPANTRYLFLGDYVDRGYFSIECV-----------LYLWALKIL---YPKT 130 (473)
T ss_dssp EEEECCCTTCH------HHHHHHH-HHHCCTTTCCEEECSCCSSSSSCHHHHH-----------HHHHHHHHH---STTT
T ss_pred EEEEEeCCCCH------HHHHHHH-HHcCCCCcceEEecCccccCCcccHHHH-----------HHHHHHHHh---CCCe
Confidence 78899999543 4667776 3221212234678999999998643211 112222211 1247
Q ss_pred EEEecCCCCCC
Q 006340 123 FYDIRGNHDNF 133 (649)
Q Consensus 123 ~~~I~GNHD~~ 133 (649)
++.++|||+..
T Consensus 131 V~LLRGNHE~~ 141 (473)
T d1auia_ 131 LFLLRGNHECR 141 (473)
T ss_dssp EEECCCTTSSH
T ss_pred EEEeCCCCccH
Confidence 99999999975
|