Citrus Sinensis ID: 006357

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------65

MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSSMN

cEEEccccccccHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHHHcccHHHHccccccccccHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHccccccccccccEEEEEccccccccccccccccHHHHHHcccccccccEEccccccccccHHHHHHHHHHHHccccccEEcccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEHHHHHHHHHHHHHHHHHccccc

ccEccccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEcccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHcccccccEEEEEcccccccccccccEEEEEccccccccccccEEEccccHEEEEEEEcccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHcHHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHccHEEEEcccccEEEcccccccHHHHHHHHHEEEccHcHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcHEEEEHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccEEEEEccHcHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcc

mfvttadveleppimtVNTVLSLLAvdypahklacyisddacsplIFYSLVEASKFAKLWVPFCkkynvqvrapfryflgesakppstssreFQQDWKMMKEEYEQLNRNIEQAAKKSFLFdmtgemavfsdterrdhpaIVKVIWENKedlsnglphliyisrekrpkhphhykagAMNVLTRVSglmtnapfmlnvdcdmyannPEIVLQAMCLLLGskegdcafvqspqyfydspadSLAILHESLGkgivgiqgpfyagtgtfhRRKVIyglwpdeienqgkcinsvngqvggellqksgnsKEFIKSAVDAlegkntgfssNLSDSLKAANQVAGcgyeygsswgkkvgwlygsateDILTGLMIHakgwktsycspdphaflgcgpsdlpAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLrsipelcyvalPAYCiitntsflpkvqepgiCIAVAIFVIYKLYTlseyihggfpiyswfvNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKvhqssdggkdgkellfdespffvpgTTILLVHLAALATgllgmqpqggqgpglgeYFCSVYVVLCFSpfllglfrkgkngiplsTICKSAALALLFLRSCKMSSMN

mfvttadveleppimTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYflgesakppstssrefQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMavfsdterrdHPAIVKVIwenkedlsngLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKkvhqssdggkdGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSSMN

MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALATgllgmqpqggqgpglgEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSSMN

*******VELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG************************************KSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISRE****HPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGEL**********************************AANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKV***********ELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSC******

MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYF****************QDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGE********KEFIKSAVDA**********NLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSSMN

MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGES************QDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITK********GKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSSMN

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MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPSTSxxxxxxxxxxxxxxxxxxxxxxxxxxxxSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSSMN

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		648	2.2.26 [Sep-21-2011]
O80891		755	Cellulose synthase-like p	yes	no	0.976	0.838	0.522	0.0
Q8RX83		755	Cellulose synthase-like p	no	no	0.976	0.838	0.517	0.0
Q0WT40		757	Cellulose synthase-like p	no	no	0.978	0.837	0.506	1e-179
O80898		757	Cellulose synthase-like p	no	no	0.972	0.832	0.506	1e-179
O80899		757	Cellulose synthase-like p	no	no	0.972	0.832	0.507	1e-178
O23386		757	Cellulose synthase-like p	no	no	0.970	0.830	0.496	1e-175
Q339N5		750	Cellulose synthase-like p	yes	no	0.976	0.844	0.493	1e-175
Q7XUU0		792	Putative cellulose syntha	no	no	0.913	0.747	0.463	1e-155
Q7XUT9		762	Cellulose synthase-like p	no	no	0.929	0.790	0.428	1e-143
Q7PC71		762	Cellulose synthase-like p	N/A	no	0.929	0.790	0.428	1e-143

>sp\|O80891\|CSLB4_ARATH Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=3 SV=1	Back alignment and function desciption

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/659 (52%), Positives = 437/659 (66%), Gaps = 26/659 (3%)

Query: 1   MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLW 60
           MFVTTAD   EPP++ VNTVLSLLAV+YPA+KLACY+SDD CSPL ++SL EASKFAK+W
Sbjct: 97  MFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIW 156

Query: 61  VPFCKKYNVQVRAPFRYFLGESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFL 120
           VPFCKKYNV+VRAPF YF      P +    EF +DW+M K EYE+L++ +E A   S  
Sbjct: 157 VPFCKKYNVRVRAPFMYFRNS---PEAAEGSEFSKDWEMTKREYEKLSQKVEDATGSSHW 213

Query: 121 FDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNG--LPHLIYISREKRPKHPHHYKAGA 178
            D   +   F +T+  DH  IVKV+WENK  + +   +PH++YISREKRP H HHYKAGA
Sbjct: 214 LDAEDDFEAFLNTKSNDHSTIVKVVWENKGGVGDEKEVPHVVYISREKRPNHFHHYKAGA 273

Query: 179 MNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGS--KEGDCAFVQSPQYFYD 236
           MN L RVSGLMTNAP+MLNVDCDMY N  ++V QAMC+ L        CAFVQ PQ FYD
Sbjct: 274 MNFLVRVSGLMTNAPYMLNVDCDMYVNEADVVRQAMCIFLQKSMDSNHCAFVQYPQDFYD 333

Query: 237 SPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVG 296
           S    L +L   LG+GI GIQGP YAG+G FH R+V+YGL  D++ + G   +    +  
Sbjct: 334 SNVGELTVLQLYLGRGIAGIQGPQYAGSGCFHTRRVMYGLSLDDLGDDGSLSSIATRKYL 393

Query: 297 GE--LLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVG 354
            E  L ++ GNSKE +KS VDAL+ K      NL DSL+ A ++  C YEY +SWGK +G
Sbjct: 394 AEESLTREFGNSKEMVKSVVDALQRKPFP-QKNLKDSLETAQEMGHCHYEYQTSWGKNIG 452

Query: 355 WLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILL 414
           WLY S TED+ T + IH++GW +SY  PDP AFLGC P   P  M QQ+RWA GLLEIL 
Sbjct: 453 WLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILF 512

Query: 415 SEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPG 474
           ++ SP++     K++FRQ L YL++  WGLRSIPEL Y  LPAYC++ N++  PK    G
Sbjct: 513 NKQSPLIGMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPKGVYLG 572

Query: 475 ICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSE 534
           I I +    I+ LYTL E+++ GF I SW+V  S  RI  T +WLF     +LKLLG+S+
Sbjct: 573 IIITLV--GIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISK 630

Query: 535 TVFEITKKVHQSSDGG--------------KDGKELLFDESPFFVPGTTILLVHLAALAT 580
           TVF +TKK    +  G              +D  +  FD S +F+PGT I+LV+LAALA 
Sbjct: 631 TVFIVTKKTMPETKSGSGSKKSQREVDCPNQDSGKFEFDGSLYFLPGTFIVLVNLAALAG 690

Query: 581 GLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFL 639
            L+G+Q +GG G GL E    + VV+ F PFL G+F KGK GIP ST+ K+A LA LF+
Sbjct: 691 CLVGLQSRGGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPFSTLSKAAFLAALFV 749

Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q8RX83\|CSLB3_ARATH Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1	Back alignment and function description

>sp\|Q0WT40\|CSLB5_ARATH Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2	Back alignment and function description

>sp\|O80898\|CSLB1_ARATH Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2	Back alignment and function description

>sp\|O80899\|CSLB2_ARATH Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1	Back alignment and function description

>sp\|O23386\|CSLB6_ARATH Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2	Back alignment and function description

>sp\|Q339N5\|CSLH1_ORYSJ Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2	Back alignment and function description

>sp\|Q7XUU0\|CSLH3_ORYSJ Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3	Back alignment and function description

>sp\|Q7XUT9\|CSLH2_ORYSJ Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3	Back alignment and function description

>sp\|Q7PC71\|CSLH2_ORYSI Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		648
224068967		749	predicted protein [Populus trichocarpa]	0.992	0.858	0.621	0.0
224128982		746	hypothetical protein POPTRDRAFT_246659 [	0.984	0.855	0.625	0.0
429326480		746	cellulose synthase-like protein [Populus	0.984	0.855	0.614	0.0
255576879		749	transferase, putative [Ricinus communis]	0.990	0.857	0.6	0.0
359485493		751	PREDICTED: cellulose synthase-like prote	0.962	0.830	0.616	0.0
297739182		1566	unnamed protein product [Vitis vinifera]	0.962	0.398	0.616	0.0
297739175		751	unnamed protein product [Vitis vinifera]	0.975	0.841	0.617	0.0
359485490		757	PREDICTED: cellulose synthase-like prote	0.990	0.848	0.602	0.0
359485495		756	PREDICTED: cellulose synthase-like prote	0.970	0.832	0.613	0.0
359485623		766	PREDICTED: cellulose synthase-like prote	0.983	0.831	0.609	0.0

>gi\|224068967\|ref\|XP_002302868.1\| predicted protein [Populus trichocarpa] gi\|222844594\|gb\|EEE82141.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/655 (62%), Positives = 491/655 (74%), Gaps = 12/655 (1%)

Query: 1   MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLW 60
           +FVTTAD  LEPPI+TVNTV+SLLAVDYPA KLACY+SDD CSP  +YSLVEASKFAKLW
Sbjct: 96  IFVTTADPVLEPPILTVNTVISLLAVDYPADKLACYVSDDGCSPTTYYSLVEASKFAKLW 155

Query: 61  VPFCKKYNVQVRAPFRYFLGESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFL 120
            PFCKK+N+QVRAPFRYF   S++ P  +S EFQQ++  MK+EYE+L   I  A KKS  
Sbjct: 156 APFCKKHNIQVRAPFRYF---SSEVPLNNSSEFQQEYNKMKDEYEELASKINDADKKSIE 212

Query: 121 FDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRPKHPHHYKAGAMN 180
            +++G+ A FS+ E ++HPAI+KV+WENK  +S+ LPHLIYISREKRPKHPHHYKAGAMN
Sbjct: 213 RNLSGDFAAFSNIEGKNHPAIIKVVWENKAGISDELPHLIYISREKRPKHPHHYKAGAMN 272

Query: 181 VLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSK-EGDCAFVQSPQYFYDSPA 239
           VLTRVSG+MTNAPFMLN+DCDM+ NNP+IV  AMCLLLGS+ E +  FVQ PQYFYD   
Sbjct: 273 VLTRVSGMMTNAPFMLNLDCDMFVNNPKIVCHAMCLLLGSRNEMESGFVQFPQYFYDGLK 332

Query: 240 DS-----LAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQ 294
           D        + H+ +G GIVGIQGPFY GTG FHRRKVIYG  P ++  Q K +  V+  
Sbjct: 333 DDPYGNQFEVWHKYIGNGIVGIQGPFYGGTGCFHRRKVIYGSCPRDVGIQAKSLTPVHAV 392

Query: 295 VGGELLQKS-GNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKV 353
               LL K  GNSKEF++SA  AL+GK       L + ++AA++VAGCGYEYG+SWGK+V
Sbjct: 393 ATSFLLLKIFGNSKEFVRSAAHALQGKANMSPKILPNLIEAAHEVAGCGYEYGTSWGKEV 452

Query: 354 GWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEIL 413
           GW YGSATEDILTGL IHA+GW++  C+PDP AFLGC P   P +M QQKRWA GLLEIL
Sbjct: 453 GWQYGSATEDILTGLKIHARGWRSVLCTPDPRAFLGCAPRVGPISMTQQKRWATGLLEIL 512

Query: 414 LSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEP 473
           +SE +PI+ATLT +LQFRQCL YLW+LIWGLRSIPE+CY  LPAYCIITN+SFLPK  EP
Sbjct: 513 MSERNPIIATLTARLQFRQCLAYLWILIWGLRSIPEICYAVLPAYCIITNSSFLPKAHEP 572

Query: 474 GICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLS 533
            + I VA+F+ Y +Y L EY+  G  I +W+ N  M R+ AT+AWLFG  S  LK+L +S
Sbjct: 573 AMYIHVALFLSYVIYGLLEYLETGLSIRAWWNNQRMARVNATNAWLFGVISVFLKILRIS 632

Query: 534 ETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQ-PQGGQG 592
            TVFE+T+K   S++GG +G+   FD SP FVPGTTILL+ L A   G  GMQ P     
Sbjct: 633 GTVFEVTQKDQSSNNGGDEGR-FTFDASPIFVPGTTILLLQLTAFVMGFGGMQLPSVNDA 691

Query: 593 PGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSSM 647
            GLGE  CSV VV+CF PF+ GLF KGK GIPLSTICKS+ L+L F+     +SM
Sbjct: 692 SGLGEILCSVLVVMCFWPFVKGLFGKGKYGIPLSTICKSSLLSLSFVYLVTSTSM 746

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224128982\|ref\|XP_002320471.1\| hypothetical protein POPTRDRAFT_246659 [Populus trichocarpa] gi\|222861244\|gb\|EEE98786.1\| hypothetical protein POPTRDRAFT_246659 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|429326480\|gb\|AFZ78580.1\| cellulose synthase-like protein [Populus tomentosa]	Back alignment and taxonomy information

>gi\|255576879\|ref\|XP_002529325.1\| transferase, putative [Ricinus communis] gi\|223531196\|gb\|EEF33042.1\| transferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|359485493\|ref\|XP_003633282.1\| PREDICTED: cellulose synthase-like protein H1-like isoform 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297739182\|emb\|CBI28833.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297739175\|emb\|CBI28826.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359485490\|ref\|XP_002269976.2\| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359485495\|ref\|XP_002270376.2\| PREDICTED: cellulose synthase-like protein H1-like isoform 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359485623\|ref\|XP_003633298.1\| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		648
TAIR\|locus:2060263		755	CSLB03 "AT2G32530" [Arabidopsi	0.976	0.838	0.508	3.1e-170
TAIR\|locus:2060211		755	CSLB04 "AT2G32540" [Arabidopsi	0.976	0.838	0.512	4e-170
TAIR\|locus:2129915		757	ATCSLB05 "AT4G15290" [Arabidop	0.978	0.837	0.5	9e-164
TAIR\|locus:2060216		757	CSLB02 "AT2G32620" [Arabidopsi	0.972	0.832	0.495	6.3e-163
TAIR\|locus:2060285		757	CSLB01 "AT2G32610" [Arabidopsi	0.879	0.752	0.516	2.5e-152
TAIR\|locus:2127776		1081	CESA1 "cellulose synthase 1" [	0.429	0.257	0.422	1.1e-101
TAIR\|locus:2156789		1065	CEV1 "CONSTITUTIVE EXPRESSION	0.523	0.318	0.380	1.9e-101
TAIR\|locus:2040080		1065	CESA10 "cellulose synthase 10"	0.429	0.261	0.419	2.8e-101
TAIR\|locus:2172457		1049	CESA4 "cellulose synthase A4"	0.441	0.272	0.431	3.4e-100
TAIR\|locus:2178193		1069	CESA5 "cellulose synthase 5" [	0.424	0.257	0.409	1.3e-98

TAIR\|locus:2060263 CSLB03 "AT2G32530" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1655 (587.6 bits), Expect = 3.1e-170, P = 3.1e-170
 Identities = 335/659 (50%), Positives = 430/659 (65%)

Query:     1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLW 60
             MFVTTAD   EPPI+  NT+LSLLAV+YPA+KLACY+SDD CSPL ++SL EASKFAK+W
Sbjct:    97 MFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIW 156

Query:    61 VPFCKKYNVQVRAPFRYFLGESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFL 120
             VPFCKKYN++VRAPFRYFL     P +T S EF +DW++ K EYE+L+R +E A   S  
Sbjct:   157 VPFCKKYNIKVRAPFRYFLNP---PAATESSEFSKDWEITKREYEKLSRRVEDATGDSHW 213

Query:   121 FDMTGEMAVFSDTERRDHPAIVKVIWENKEDLS--NGLPHLIYISREKRPKHPHHYKAGA 178
              D   +   FS+T+  DH  IVKV+WENK  +   N +PH +YISREKRP + HHYKAGA
Sbjct:   214 LDAEDDFEDFSNTKPNDHSTIVKVVWENKGGVGVENEVPHFVYISREKRPNYLHHYKAGA 273

Query:   179 MNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLL--GSKEGDCAFVQSPQYFYD 236
             MN L RVSGLMTNAP+MLNVDCDMYAN  ++V QAMC+ L        CAFVQ PQ FYD
Sbjct:   274 MNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSMNSNHCAFVQFPQEFYD 333

Query:   237 SPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVG 296
             S AD L +L   LG+GI GIQGP YAG+G FH R+V+YGL  D++E+ G   +    +  
Sbjct:   334 SNADELTVLQSYLGRGIAGIQGPTYAGSGCFHTRRVMYGLSIDDLEDDGSLSSLATRKYL 393

Query:   297 GE--LLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVG 354
              E  L ++ GNS E + S V+AL+ K     + L++SL+AA +V  C +EY +SWGK +G
Sbjct:   394 AEENLAREFGNSNEMVTSVVEALQRKPNP-QNTLANSLEAAQEVGHCHFEYQTSWGKTIG 452

Query:   355 WLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILL 414
             WLY S  ED  T + IH++GW +SY SP P AFLG  P   P AM QQ+RWA GLLE+L 
Sbjct:   453 WLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLF 512

Query:   415 SEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPG 474
             ++ SP++     K++FRQ L YL++  WGLRSIPEL Y  LPAYC++ N +  PK    G
Sbjct:   513 NKQSPLIGMFCRKIRFRQSLAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPKGVYLG 572

Query:   475 ICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSE 534
             I   V +  ++ LY+L E++  GF + SWF + S  RI  T +WLF     +LKLLG+S+
Sbjct:   573 I--VVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISK 630

Query:   535 TVFEITKKVHQSSDGG--------------KDGKELLFDESPFFVPGTTILLVHLAALAT 580
             TVF +TKK    +  G              +D  +  FD S +F+PGT ILLV+LAALA 
Sbjct:   631 TVFIVTKKTMPKTMSGSGSEKSQREVDCPNQDSGKFEFDGSLYFLPGTFILLVNLAALAG 690

Query:   581 XXXXXXXXXXXXXXXXEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFL 639
                             E    + VV+ F PFL G+F KGK GIP ST+ K+A LA+LF+
Sbjct:   691 CSVGLQRHRGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPWSTLSKAAFLAVLFV 749

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016759 "cellulose synthase activity" evidence=ISS

GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA

GO:0030244 "cellulose biosynthetic process" evidence=IEA

TAIR\|locus:2060211 CSLB04 "AT2G32540" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2129915 ATCSLB05 "AT4G15290" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2060216 CSLB02 "AT2G32620" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2060285 CSLB01 "AT2G32610" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80891	CSLB4_ARATH	2, ., 4, ., 1, ., -	0.5220	0.9768	0.8384	yes	no
Q339N5	CSLH1_ORYSJ	2, ., 4, ., 1, ., -	0.4932	0.9768	0.844	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691
4th Layer	2.4.1.12	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_II2039	hypothetical protein (749 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		648
PLN02190		756	PLN02190, PLN02190, cellulose synthase-like protei	0.0
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	1e-140
PLN02893		734	PLN02893, PLN02893, Cellulose synthase-like protei	1e-138
PLN02189		1040	PLN02189, PLN02189, cellulose synthase	1e-128
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	1e-126
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	1e-125
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	1e-124
PLN02248		1135	PLN02248, PLN02248, cellulose synthase-like protei	2e-92
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	9e-71
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	2e-65
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	1e-55
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	3e-49
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-11
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-09
COG1215		439	COG1215, COG1215, Glycosyltransferases, probably i	5e-09
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	2e-05
pfam13632		194	pfam13632, Glyco_trans_2_3, Glycosyl transferase f	4e-04

>gnl\|CDD\|215122 PLN02190, PLN02190, cellulose synthase-like protein	Back alignment and domain information

 Score =  757 bits (1955), Expect = 0.0
 Identities = 350/665 (52%), Positives = 450/665 (67%), Gaps = 35/665 (5%)

Query: 1   MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLW 60
           MFV TAD   EPPI+ VNTVLSLLAV+YPA+KLACY+SDD CSPL ++SL EASKFAK+W
Sbjct: 97  MFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIW 156

Query: 61  VPFCKKYNVQVRAPFRYFLGESAKPP-STSSREFQQDWKMMKEEYEQLNRNIEQAAKKSF 119
           VPFCKKYNV+VRAPFRYFL     PP +T   EF +DW+M K EYE+L+R +E A   S 
Sbjct: 157 VPFCKKYNVRVRAPFRYFL----NPPVATEDSEFSKDWEMTKREYEKLSRKVEDATGDSH 212

Query: 120 LFDMTGEMAVFSDTERRDHPAIVKVIWENKEDL--SNGLPHLIYISREKRPKHPHHYKAG 177
             D   +   FS+T+  DH  IVKV+WENK  +     +PHL+YISREKRP + HHYKAG
Sbjct: 213 WLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKAG 272

Query: 178 AMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLL-GSKEGD-CAFVQSPQYFY 235
           AMN L RVSGLMTNAP+MLNVDCDMYAN  ++V QAMC+ L  SK  + CAFVQ PQ FY
Sbjct: 273 AMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFY 332

Query: 236 DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQ- 294
           DS  + L +L   LG+GI GIQGP Y G+G FH R+V+YGL  D++E+ G  ++SV  + 
Sbjct: 333 DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGS-LSSVATRE 391

Query: 295 --VGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKK 352
                 L ++ GNSKE +KS VDAL+ +     ++L++S++AA +V  C YEY +SWG  
Sbjct: 392 FLAEDSLAREFGNSKEMVKSVVDALQ-RKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNT 450

Query: 353 VGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEI 412
           +GWLY S  ED+ T + IH++GW +SY SPDP AFLG  P   P AM QQ+RWA GL+E+
Sbjct: 451 IGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEV 510

Query: 413 LLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQE 472
           L ++ SP++     K++FRQ L YL++    LRSIPEL Y  LPAYC++ N++  PK   
Sbjct: 511 LFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPK--G 567

Query: 473 PGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGL 532
             + I V +  ++ LYTL E++  GF + SW+V+ S  RI ATS+WLF     +LKLLG+
Sbjct: 568 VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGI 627

Query: 533 SETVFEITKKV------------HQSSDGG--KDGKELLFDESPFFVPGTTILLVHLAAL 578
           S+TVF +TKK              Q  D G   D  +  FD S +F+PGT I+LV+LAAL
Sbjct: 628 SKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFDGSLYFLPGTFIVLVNLAAL 687

Query: 579 ATGLLGMQP----QGGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAAL 634
           A  L+G+Q      GG G GL E    + VV+ F PFL GLF KGK GIPLST+ K+A L
Sbjct: 688 AGFLVGLQRSSYSHGGGGSGLAEACGCILVVMLFLPFLKGLFEKGKYGIPLSTLSKAAFL 747

Query: 635 ALLFL 639
           A+LF+
Sbjct: 748 AVLFV 752

Length = 756

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215483 PLN02893, PLN02893, Cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215121 PLN02189, PLN02189, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215138 PLN02248, PLN02248, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		648
PF03552		720	Cellulose_synt: Cellulose synthase; InterPro: IPR0	100.0
PLN02400		1085	cellulose synthase	100.0
PLN02638		1079	cellulose synthase A (UDP-forming), catalytic subu	100.0
PLN02436		1094	cellulose synthase A	100.0
PLN02195		977	cellulose synthase A	100.0
PLN02190		756	cellulose synthase-like protein	100.0
PLN02189		1040	cellulose synthase	100.0
PLN02915		1044	cellulose synthase A [UDP-forming], catalytic subu	100.0
PLN02248		1135	cellulose synthase-like protein	100.0
PLN02893		734	Cellulose synthase-like protein	100.0
TIGR03030		713	CelA cellulose synthase catalytic subunit (UDP-for	100.0
PRK11498		852	bcsA cellulose synthase catalytic subunit; Provisi	100.0
PRK05454		691	glucosyltransferase MdoH; Provisional	100.0
cd04191		254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	100.0
PRK14583		444	hmsR N-glycosyltransferase; Provisional	99.98
COG1215		439	Glycosyltransferases, probably involved in cell wa	99.97
PRK11204		420	N-glycosyltransferase; Provisional	99.97
TIGR03111		439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	99.96
PRK14716		504	bacteriophage N4 adsorption protein B; Provisional	99.96
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	99.94
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	99.94
cd06435		236	CESA_NdvC_like NdvC_like proteins in this family a	99.94
cd06427		241	CESA_like_2 CESA_like_2 is a member of the cellulo	99.93
PRK11234		727	nfrB bacteriophage N4 adsorption protein B; Provis	99.93
cd04190		244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.89
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	99.89
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.88
PRK15489		703	nfrB bacteriophage N4 adsorption protein B; Provis	99.86
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	99.86
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	99.84
cd06434		235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.83
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	99.8
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	99.76
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	99.75
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	99.73
COG2943		736	MdoH Membrane glycosyltransferase [Cell envelope b	99.73
cd06436		191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.64
cd06438		183	EpsO_like EpsO protein participates in the methano	99.61
cd04184		202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.54
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	99.5
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.49
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.4
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.38
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.36
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.35
cd02522		221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.33
cd06420		182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.31
PF03142		527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	99.24
cd06913		219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	99.24
cd06442		224	DPM1_like DPM1_like represents putative enzymes si	99.23
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.23
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.22
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	99.17
PLN02726		243	dolichyl-phosphate beta-D-mannosyltransferase	99.15
cd04188		211	DPG_synthase DPG_synthase is involved in protein N	99.06
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	99.04
PRK10073		328	putative glycosyl transferase; Provisional	99.03
TIGR01556		281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	99.0
PRK10018		279	putative glycosyl transferase; Provisional	98.92
cd04179		185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	98.9
KOG2571		862	consensus Chitin synthase/hyaluronan synthase (gly	98.83
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	98.79
PRK10063		248	putative glycosyl transferase; Provisional	98.78
PF10111		281	Glyco_tranf_2_2: Glycosyltransferase like family 2	98.77
cd00761		156	Glyco_tranf_GTA_type Glycosyltransferase family A	98.63
PTZ00260		333	dolichyl-phosphate beta-glucosyltransferase; Provi	98.49
COG1216		305	Predicted glycosyltransferases [General function p	98.32
PRK13915		306	putative glucosyl-3-phosphoglycerate synthase; Pro	98.18
PRK10714		325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	98.1
cd02511		229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	97.63
COG0463		291	WcaA Glycosyltransferases involved in cell wall bi	97.48
KOG2547		431	consensus Ceramide glucosyltransferase [Lipid tran	97.16
cd02514		334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	96.47
KOG2978		238	consensus Dolichol-phosphate mannosyltransferase [	95.06
KOG2977		323	consensus Glycosyltransferase [General function pr	94.21
PF02364		817	Glucan_synthase: 1,3-beta-glucan synthase componen	93.89
PF13712		217	Glyco_tranf_2_5: Glycosyltransferase like family;	88.69
PF13704		97	Glyco_tranf_2_4: Glycosyl transferase family 2	82.04

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals	Back alignment and domain information

Probab=100.00  E-value=8.5e-176  Score=1462.74  Aligned_cols=642  Identities=44%  Similarity=0.739  Sum_probs=591.3

Q ss_pred             CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357            1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG   80 (648)
Q Consensus         1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~   80 (648)
                      ||||||||++|||++|+|||||+||+|||+|||+|||||||||++||++|.||++|||+||||||||+||||+|++||+.
T Consensus         3 vFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF~~   82 (720)
T PF03552_consen    3 VFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYFSS   82 (720)
T ss_pred             eEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHhcc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccc----cCcccccccccccCCCccEEEEecCCCcc---c
Q 006357           81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDM----TGEMAVFSDTERRDHPAIVKVIWENKEDL---S  153 (648)
Q Consensus        81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~vl~d~~~~~---~  153 (648)
                      +.++.+++.+++|++||++||++|||||+|||.+.++..+.+.    ..|+++|++++++|||+||||+++++++.   +
T Consensus        83 ~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~~~~g  162 (720)
T PF03552_consen   83 KIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGKDVDG  162 (720)
T ss_pred             CCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCccccc
Confidence            9998899999999999999999999999999998776444333    24579999999999999999999987654   5


Q ss_pred             CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357          154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ  232 (648)
Q Consensus       154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ  232 (648)
                      +++|+|+||+||||||++||+||||||+++|||+++||+|||+|+|||||+|||+.++++||||+|++. +++||||+||
T Consensus       163 ~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq  242 (720)
T PF03552_consen  163 NELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQ  242 (720)
T ss_pred             CcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCc
Confidence            679999999999999999999999999999999999999999999999999999999999999999985 9999999999


Q ss_pred             ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhccc-------------c-------
Q 006357          233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGK-------------C-------  287 (648)
Q Consensus       233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~-------------~-------  287 (648)
                      +|+     |+|+|++++||+++++|+||+|||+|+||||+|||+||||.++++......             +       
T Consensus       243 ~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~  322 (720)
T PF03552_consen  243 RFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKK  322 (720)
T ss_pred             eeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccccc
Confidence            999     999999999999999999999999999999999999999999975322110             0       


Q ss_pred             cC--------------------C---------CCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhh
Q 006357          288 IN--------------------S---------VNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQV  338 (648)
Q Consensus       288 ~~--------------------~---------~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v  338 (648)
                      .+                    .         ....+..++.++||+|++|++|+..+..+.  ....+..+.+++|++|
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~--~~~~~~~~~L~EA~~V  400 (720)
T PF03552_consen  323 PKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGV--PRSPSPASLLEEAIHV  400 (720)
T ss_pred             chhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCC--CCCCChHHHHHHHHHH
Confidence            00                    0         112345678899999999999987543222  2244556789999999


Q ss_pred             cccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHHhhcc
Q 006357          339 AGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHS  418 (648)
Q Consensus       339 ~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~  418 (648)
                      ++|+||++|+||||+||.|+|+|||+.||++||++||||+||+|+++||.|.||+|+.+.+.|++||+.|++||+++|+|
T Consensus       401 ~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~  480 (720)
T PF03552_consen  401 ASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHC  480 (720)
T ss_pred             hcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 006357          419 PILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGF  498 (648)
Q Consensus       419 pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~  498 (648)
                      |++.++.++|+++||++|++.++||+.|+|.++|+++|++||++|++++|+++.+++++|++++++++++++++++|+|.
T Consensus       481 Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~  560 (720)
T PF03552_consen  481 PLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGV  560 (720)
T ss_pred             chhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccC
Confidence            99997668999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHHHHHH
Q 006357          499 PIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAAL  578 (648)
Q Consensus       499 ~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al  578 (648)
                      ++++|||+||+|+|.++++|++|++++++|+||+++.+|.||+|..+++++ ...+.|.|+|+++++|+++++++|++|+
T Consensus       561 si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~-~~~ely~f~wS~LfiP~tTllilNLva~  639 (720)
T PF03552_consen  561 SIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDD-KYAELYIFKWSPLFIPPTTLLILNLVAF  639 (720)
T ss_pred             cHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccc-cccccccccccchhhHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999884433 3467899999999999999999999999


Q ss_pred             HHHHhhcccCC--CCchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357          579 ATGLLGMQPQG--GQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSS  646 (648)
Q Consensus       579 ~~g~~~~~~~~--~~~~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~  646 (648)
                      ++|+++.+.++  +++++++++|+++|+++++|||++||++|+ +|+|++|++||++||++||++|+++.
T Consensus       640 v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~-~r~P~~v~v~S~lla~i~~llwv~i~  708 (720)
T PF03552_consen  640 VVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRK-DRIPTSVIVWSVLLASIFSLLWVRID  708 (720)
T ss_pred             HHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhccc-CCcceeehHHHHHHHHHHHHHheecc
Confidence            99999987643  578899999999999999999999999554 47999999999999999999999874

The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane

>PLN02400 cellulose synthase	Back alignment and domain information

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>PLN02436 cellulose synthase A	Back alignment and domain information

>PLN02195 cellulose synthase A	Back alignment and domain information

>PLN02190 cellulose synthase-like protein	Back alignment and domain information

>PLN02189 cellulose synthase	Back alignment and domain information

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>PLN02248 cellulose synthase-like protein	Back alignment and domain information

>PLN02893 Cellulose synthase-like protein	Back alignment and domain information

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>PRK05454 glucosyltransferase MdoH; Provisional	Back alignment and domain information

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111	Back alignment and domain information

>PRK14716 bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily	Back alignment and domain information

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine	Back alignment and domain information

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis	Back alignment and domain information

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function	Back alignment and domain information

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase	Back alignment and domain information

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2	Back alignment and domain information

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine	Back alignment and domain information

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1	Back alignment and domain information

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase	Back alignment and domain information

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK10073 putative glycosyl transferase; Provisional	Back alignment and domain information

>TIGR01556 rhamnosyltran L-rhamnosyltransferase	Back alignment and domain information

>PRK10018 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	Back alignment and domain information

>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>PRK10063 putative glycosyl transferase; Provisional	Back alignment and domain information

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]	Back alignment and domain information

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	Back alignment and domain information

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional	Back alignment and domain information

>COG1216 Predicted glycosyltransferases [General function prediction only]	Back alignment and domain information

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	Back alignment and domain information

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	Back alignment and domain information

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides	Back alignment and domain information

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]	Back alignment and domain information

>KOG2977 consensus Glycosyltransferase [General function prediction only]	Back alignment and domain information

>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B	Back alignment and domain information

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		648
4hg6_A		802	Structure Of A Cellulose Synthase - Cellulose Trans		1e-04

>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802

Back alignment and structure

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 354 GWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEIL 413
           G+   + TED  T L IH++GWK+ Y   D     G  P    + ++Q+ RWA G++++L
Sbjct: 334 GFAGETITEDAETALEIHSRGWKSLYI--DRAMIAGLQPETFASFIQQRGRWATGMMQML 391
Query: 414 L 414
           L
Sbjct: 392 L 392

PyMOL of 4hg6

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		648
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 75/499 (15%), Positives = 142/499 (28%), Gaps = 161/499 (32%)

Query: 101 KEEYEQL--NRNIEQAAKKSFLFDM---TGEMAV---FSDTERRDHPAIVKVIWENKEDL 152
           KEE + +  +++         LF       E  V     +  R ++  ++  I    E  
Sbjct: 48  KEEIDHIIMSKDAVSGTL--RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI--KTEQR 103

Query: 153 SNGLPHLIYIS-REKRPKHPHHYKAGAMNVLTRVSGLMT--NAPFMLNVDCDMYANNPEI 209
              +   +YI  R++       +     NV +R+   +    A   L            +
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAK--YNV-SRLQPYLKLRQALLELRP-------AKNV 153

Query: 210 VLQAM------CL---LLGSKEGDCAFVQSPQYFY------DSPADSLAILHESLGKGIV 254
           ++  +       +   +  S +  C      + F+      +SP   L +L + L     
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKM--DFKIFWLNLKNCNSPETVLEML-QKL----- 205

Query: 255 GIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFI---- 310
                        ++    +    D   N    I+S+  ++   L  K   +   +    
Sbjct: 206 ------------LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 311 --KSAVDALEGK-----NTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATED 363
               A +A          T F   ++D L AA         +  S       L     + 
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQ-VTDFLSAATTTHISLDHH--SMT-----LTPDEVKS 305

Query: 364 ILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILAT 423
           +L       K             +L C P DLP  +       + ++   + +    LAT
Sbjct: 306 LL------LK-------------YLDCRPQDLPREVLTTNPRRLSIIAESIRDG---LAT 343

Query: 424 LTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFV 483
                 ++       +    L +I E                    V EP          
Sbjct: 344 WD---NWKH------VNCDKLTTIIESSL----------------NVLEPAE-------- 370

Query: 484 IYKLYT-LSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLL---GLSETVFEI 539
             K++  LS  +   FP                SA +    + +L L+    +   V  +
Sbjct: 371 YRKMFDRLS--V---FP---------------PSAHI---PTILLSLIWFDVIKSDVMVV 407

Query: 540 TKKVHQSSDGGKDGKELLF 558
             K+H+ S   K  KE   
Sbjct: 408 VNKLHKYSLVEKQPKESTI 426

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		648
4hg6_A		802	Cellulose synthase subunit A; membrane translocati	100.0
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.52
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.51
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	99.5
3bcv_A		240	Putative glycosyltransferase protein; protein stru	99.48
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.42
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.39
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.37
3ckj_A		329	Putative uncharacterized protein; mycobacteria, un	99.05
3l7i_A		729	Teichoic acid biosynthesis protein F; GT-B fold, m	99.0
4fix_A		657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	98.97
3f1y_A		387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	98.46
2fy7_A		287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	98.17
2nxv_A		249	ATP synthase subunits region ORF 6; majastridin, A	97.99
2bo4_A		397	Mannosylglycerate synthase; catalysis, glycosyltra	97.45
1fo8_A		343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	96.46
2zu9_A		394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	94.12
2wvl_A		391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	92.25

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}	Back alignment and structure

Probab=100.00  E-value=1.7e-44  Score=425.01  Aligned_cols=426  Identities=20%  Similarity=0.291  Sum_probs=314.1

Q ss_pred             CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357            1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG   80 (648)
Q Consensus         1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~   80 (648)
                      |.|+|   |||++.++.+|+.|++++|||.++++|+|+|||++|.|.+.                               
T Consensus       144 ViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~-------------------------------  189 (802)
T 4hg6_A          144 ILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS-------------------------------  189 (802)
T ss_dssp             EEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-------------------------------
T ss_pred             EEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-------------------------------
Confidence            46777   99999999999999999999999999999999999977321                               


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357           81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI  160 (648)
Q Consensus        81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~  160 (648)
                              .+|+..++...   .+++++...++                                           .++.
T Consensus       190 --------~d~~i~~~~~~---~~~~l~~~~~~-------------------------------------------~~v~  215 (802)
T 4hg6_A          190 --------PDPELAQKAQE---RRRELQQLCRE-------------------------------------------LGVV  215 (802)
T ss_dssp             --------SSHHHHHHHHH---HHHHHHHHHHH-------------------------------------------HTCE
T ss_pred             --------CCHHHHHHHHh---hhHHHHHHHHh-------------------------------------------cCcE
Confidence                    11222222222   22222221111                                           3467


Q ss_pred             EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chh
Q 006357          161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSP  238 (648)
Q Consensus       161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~  238 (648)
                      |+.|++    ++++|+||+|.|++    .+++|||+++|||++ ++|++|++++.+|.+  ++++++||+|+.+.  |+.
T Consensus       216 ~i~~~~----~~~GKa~alN~gl~----~a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~--dp~v~~V~~~~~~~~~~~~  284 (802)
T 4hg6_A          216 YSTRER----NEHAKAGNMSAALE----RLKGELVVVFDADHV-PSRDFLARTVGYFVE--DPDLFLVQTPHFFINPDPI  284 (802)
T ss_dssp             EEECSS----CCSHHHHHHHHHHH----HCCCSEEEECCTTEE-ECTTHHHHHHHHHHH--SSSCCEEECCCCBSSCCHH
T ss_pred             EEEecC----CCCcchHHHHHHHH----hcCCCEEEEECCCCC-cChHHHHHHHHHHhc--CCCeEEEeccEEEeCCchH
Confidence            888887    45689999999999    689999999999998 589999999999963  37899999999998  432


Q ss_pred             h----------hhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHH
Q 006357          239 A----------DSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKE  308 (648)
Q Consensus       239 ~----------~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~  308 (648)
                      .          ++...|++..+.+.+.+++++++|+++++||+++.                                  
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~----------------------------------  330 (802)
T 4hg6_A          285 QRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD----------------------------------  330 (802)
T ss_dssp             HHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH----------------------------------
T ss_pred             hhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH----------------------------------
Confidence            2          34578899999999999999999999999999882                                  


Q ss_pred             HHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCccc
Q 006357          309 FIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFL  388 (648)
Q Consensus       309 ~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~  388 (648)
                                                  ++              |||+.++++||.+++++++++||++.|++ ++. ++
T Consensus       331 ----------------------------~v--------------Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~-~~~-~~  366 (802)
T 4hg6_A          331 ----------------------------EA--------------GGFAGETITEDAETALEIHSRGWKSLYID-RAM-IA  366 (802)
T ss_dssp             ----------------------------HH--------------TTCCCSSSSHHHHHHHHHHTTTCCEEECC-CCC-EE
T ss_pred             ----------------------------Hc--------------CCcCCCCcchHHHHHHHHHHcCCeEEEec-CCE-EE
Confidence                                        34              48999999999999999999999999995 554 58


Q ss_pred             ccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc
Q 006357          389 GCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLP  468 (648)
Q Consensus       389 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p  468 (648)
                      +++|+|+.++++||.||++|.+|+++ +++|++.   +++++.||++|+..+.+++.+++.++++++|++++++++.+++
T Consensus       367 ~~~p~t~~~~~~Qr~RW~~G~~q~l~-~~~pl~~---~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~  442 (802)
T 4hg6_A          367 GLQPETFASFIQQRGRWATGMMQMLL-LKNPLFR---RGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFV  442 (802)
T ss_dssp             ECCCCSHHHHHHHHHHHHHHHHHHHH-HSCTTSC---SSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             ecCCCCHHHHHHHHHHHHccHHHHHH-HhCcccc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhh
Confidence            99999999999999999999999998 5678775   7899999999999999999888889999999999999998887


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCC
Q 006357          469 KVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSD  548 (648)
Q Consensus       469 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~  548 (648)
                      .....++.++++.++...+   +.....|.....||. +.+.. ......+.++   +...+++++.+|+||+|+...++
T Consensus       443 ~~~~~~~~~~lp~~l~~~~---~~~~~~~~~r~~~~~-~l~~~-~~~~~~~~a~---l~~l~~~~~~~f~VT~Kg~~~~~  514 (802)
T 4hg6_A          443 ATFEEVLAYMPGYLAVSFL---VQNALFARQRWPLVS-EVYEV-AQAPYLARAI---VTTLLRPRSARFAVTAKDETLSE  514 (802)
T ss_dssp             CCHHHHHHHHHHHHHHHHH---HHHHHHTTTSCTTHH-HHHHH-HHHHHHHHHH---HHHHHSTTCCCCCCCCCCCCCSS
T ss_pred             cCHHHHHHHHHHHHHHHHH---HHHHHhcCcHHHHHH-HHHHH-HHHHHHHHHH---HHHHhCCCCCcceECCCCccccc
Confidence            6444443333332221111   111112211112332 22111 1111122333   33345678899999999987542


Q ss_pred             CCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccCCC-CchhHHHHHHHHHHHHHHHHHHHHHh-ccCCCCCc
Q 006357          549 GGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGG-QGPGLGEYFCSVYVVLCFSPFLLGLF-RKGKNGIP  624 (648)
Q Consensus       549 ~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~~~-~~~~~~~l~~~~~~v~~l~p~~~al~-~k~~~~~P  624 (648)
                      .      + +  +.+++|++++++++++++++|+++...... .....++++|++|+++.+.+.+...+ ++++++.|
T Consensus       515 ~------~-~--~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~  583 (802)
T 4hg6_A          515 N------Y-I--SPIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP  583 (802)
T ss_dssp             C------C-B--CTTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred             c------c-h--hhHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence            1      1 2  367799999999999999999998764332 23345667777777777776666666 44443434

PyMOL of 4hg6

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A	Back alignment and structure

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*	Back alignment and structure

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*	Back alignment and structure

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*	Back alignment and structure

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...	Back alignment and structure

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*	Back alignment and structure

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*	Back alignment and structure

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*	Back alignment and structure

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*	Back alignment and structure

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		648
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.47
d1qg8a_		255	Spore coat polysaccharide biosynthesis protein Sps	99.13
d1omza_		265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	98.71
d2bo4a1		381	Mannosylglycerate synthase, MGS {Rhodothermus mari	96.62

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=6.9e-14  Score=143.98  Aligned_cols=110  Identities=13%  Similarity=0.004  Sum_probs=83.9

Q ss_pred             CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357            1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG   80 (648)
Q Consensus         1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~   80 (648)
                      |.|+|   |||....+..||-|++...||....+|+|+|||+++.|.....|                            
T Consensus        26 IIIp~---yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~----------------------------   74 (328)
T d1xhba2          26 VVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE----------------------------   74 (328)
T ss_dssp             EEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH----------------------------
T ss_pred             EEEec---cCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHH----------------------------
Confidence            34666   89988888999999999999965679999999999865322222                            


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357           81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI  160 (648)
Q Consensus        81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~  160 (648)
                                            +|.      +.                                         ..+.+.
T Consensus        75 ----------------------~~~------~~-----------------------------------------~~~~i~   85 (328)
T d1xhba2          75 ----------------------SYV------KK-----------------------------------------LKVPVH   85 (328)
T ss_dssp             ----------------------HHH------HS-----------------------------------------SSSCEE
T ss_pred             ----------------------HHH------Hh-----------------------------------------cCCCeE
Confidence                                  111      00                                         013455


Q ss_pred             EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcC
Q 006357          161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGS  220 (648)
Q Consensus       161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~  220 (648)
                      ++..+++.     +.++|.|.|++    .++||||+.+|+|++ ++|++|.+++.+|.+.
T Consensus        86 vi~~~~n~-----G~~~a~N~Gi~----~a~gd~i~flD~D~~-~~p~~l~~l~~~~~~~  135 (328)
T d1xhba2          86 VIRMEQRS-----GLIRARLKGAA----VSRGQVITFLDAHCE-CTAGWLEPLLARIKHD  135 (328)
T ss_dssp             EEECSSCC-----CHHHHHHHHHH----HCCSSEEEEEESSEE-ECTTCHHHHHHHHHHC
T ss_pred             EEEecccc-----cchHHHHHHHH----hhhcceeeecCcccc-cChhHHHHHHHHHhcC
Confidence            56555533     59999999999    689999999999988 5999999999999863

PyMOL of d1xhba2

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}	Back information, alignment and structure