Citrus Sinensis ID: 006408

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640------
MRFEIASVLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEDNENQEAPLMPREVLLKNGNGGSRPIKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDKFDVKETVSSNVYEGKPESCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCNFR
ccEEEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEccccccccccEEEEEEcccccccEEEEEcccccccccccHHHHHcccccccEEEEEEEEEEccccccccccccEEEEEccccccccccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEccEEEccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccEEEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEEEccccHHHHHHHHHHHHHcccEEEccccccccHHHHHHHHHHHHHHcccccEEEEEccccEEEEHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHcccccccccc
ccEEEEEEEcccccccccccccEccccccccccccccccccccccccHHcccccccccccccccccHccccccccccHHcccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEccHHHcccccEEEEEcccEcccEEEEEEcccccccccccHHEEEccccccEEEEEEEEEEEcccccccccccEEEEEccccccccccccEEEEcccEccccccccccccccccccccccccccHHHHHHHcccccccHHccccHHHHHccccccccccccccccccccEEEEEEEEccccEEEEEcccEEEccccccccccccccEEEEcccccEHHHHHcccccccccccHHHHHccHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEEEccccHHHHHHHHHHHHHHccEEEccHHHHHHHHHHHHHHHHHHHHHccccHEEEcccccEEEcHHHHHHHHHcccccccEEEEEEEccccccccccEEEcHHHccccccccccccccEEEcHHHHHHHHHHHHHcccccEcHHHHHHHHHHHHHcccccEEEEcccccccccccccEEEEEcccHHHHHHHHHHHHcccccccccc
MRFEIASVlsgddnyigldeklvgyngdsdlskpffssvykdtfhrklednenqeaplmprevllkngnggsrpikplqfrygriTGEIMRrrnrtsefSVLERMADEAWTLGLKawdevdkfdvketvssnvyegkpescpswlsmsgeelangdrlmflpcglaagssitvvgtphyahqeflpqltrrrngdSLVMVSQFMVELQglksvdgedppkilhlnprikgdwshrpviehntcyrmqwgtaqrcdglsskkdddmlvdgnlrcekwmrndvadskdsktASWFKRFigreqkpevtwpfpfvegRLFILTLRAGvegyhinvggrhvtsfpyrtgftledatglaikgdvdihsvyatnlpashpsfSLQRVLEMSskwkaeplparpvHLFIGVLSATNHFAERMAIRKTWMQsskikssnVVARFFVALNPRKEVNAVLKKEAaffgdivilpfmdRYELVVLKTIAICEFGVQNVTAAYImkcdddtfIRVDAVLKEIEGifpkrslymgnlnllhrplrtgkwavtyeewpqevyppyangpgyvisSDIAKFIVLQHgnqslrlfkmedvSMGMWVEQFNSTMTVRYSHSWKFcqygcmegyytahyqsprqmICLWdklsrgrahccnfr
mrfeiasvlsgddnyiGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEdnenqeaplmpREVLLKngnggsrpikplqfrygritgeimrrrnrtsefsvlERMADEAWTLGLKAWDEVDKFDVKEtvssnvyegkpescpsWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHlnprikgdwshRPVIEHNTCYRmqwgtaqrcdglsskkdddMLVDGNLrcekwmrndvadskdsktASWFKRFIgreqkpevtwpfpFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCNFR
MRFEIASVLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEDNENQEAPLMPREVLLKNGNGGSRPIKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDKFDVKETVSSNVYEGKPESCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCNFR
*******VLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTF*******************************KPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDKFDVKETVSSNVYE*****CPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDG***PKILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGL******DMLVDGNLRCEKWMRNDV*******TASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCN**
***E**SVLSGDDNYIGLDEKLVGYNGDSD*********************************************************EIMRRRNRTSEFSVLERMADEAWTLGLKAWDEV*********************************NGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLK***GEDPPKILHLNPRIKGDWSHRPVIEHNTCYRMQWGTA***************VDGNLRCEKWMR*************************EVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVA***********KKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGR**CC***
MRFEIASVLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEDNENQEAPLMPREVLLKNGNGGSRPIKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDKFDVKETVSSNVYEGKPESCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRND********TASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRG********
*RFEIASVLSGDDNYIGLDEKLVGYNGDSDLSKPF***************************************IKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDKFD***************SCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGLSS****DMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCC***
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MRFEIASVLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEDNENQEAPLMPREVLLKNGNGGSRPIKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDKFDVKETVSSNVYEGKPESCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCNFR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query646 2.2.26 [Sep-21-2011]
A7XDQ9684 Probable beta-1,3-galacto no no 0.986 0.931 0.694 0.0
Q8GXG6673 Probable beta-1,3-galacto no no 0.835 0.802 0.608 0.0
Q9LV16681 Probable beta-1,3-galacto no no 0.947 0.898 0.558 0.0
Q8RX55672 Probable beta-1,3-galacto no no 0.826 0.794 0.605 0.0
Q8L7F9643 Beta-1,3-galactosyltransf no no 0.794 0.797 0.369 9e-91
Q9ASW1619 Probable beta-1,3-galacto no no 0.718 0.749 0.351 1e-80
Q9Y2C3310 Beta-1,3-galactosyltransf yes no 0.371 0.774 0.286 2e-21
Q9MYM7326 Beta-1,3-galactosyltransf N/A no 0.365 0.723 0.267 6e-21
Q7JK26326 Beta-1,3-galactosyltransf no no 0.365 0.723 0.267 6e-21
Q7JK25326 Beta-1,3-galactosyltransf N/A no 0.365 0.723 0.267 6e-21
>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1 Back     alignment and function desciption
 Score =  955 bits (2469), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/649 (69%), Positives = 532/649 (81%), Gaps = 12/649 (1%)

Query: 3   FEIASVLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEDNENQEAPLMPRE 62
            E+ ++LSGD    GLD  L     D+ L      S+  D  +RKLED ++Q  P   ++
Sbjct: 43  IEMVAMLSGD---TGLDGAL----SDTSLDVSLSGSLRNDMLNRKLEDEDHQSGPSTTQK 95

Query: 63  VLLKNGNGGSRPIKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDK 122
           V  +    GS+ I+PL FRYGRI+GE+MRRRNRT   S  ERMADEAW LG KAW++VDK
Sbjct: 96  VSPEEKINGSKQIQPLLFRYGRISGEVMRRRNRTIHMSPFERMADEAWILGSKAWEDVDK 155

Query: 123 FDV-KETVSSNVYEGKPESCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAH 181
           F+V K   S++++EGK ESCPS +SM+G++L   +R+M LPCGLAAGSSIT++GTP YAH
Sbjct: 156 FEVDKINESASIFEGKVESCPSQISMNGDDLNKANRIMLLPCGLAAGSSITILGTPQYAH 215

Query: 182 QEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHN 241
           +E +PQ +R      +V+VSQFMVELQGLK+ DGE PPKILHLNPRIKGDW+HRPVIEHN
Sbjct: 216 KESVPQRSRLTRSYGMVLVSQFMVELQGLKTGDGEYPPKILHLNPRIKGDWNHRPVIEHN 275

Query: 242 TCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDV---ADSKDSKTASWFKRFIG 298
           TCYRMQWG AQRCDG  SKKD D+LVDG  RCEKW +ND+    DSK+SKT SWFKRFIG
Sbjct: 276 TCYRMQWGVAQRCDGTPSKKDADVLVDGFRRCEKWTQNDIIDMVDSKESKTTSWFKRFIG 335

Query: 299 REQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKG 358
           REQKPEVTW FPF EG++F+LTLRAG++G+HINVGGRHV+SFPYR GFT+EDATGLA+ G
Sbjct: 336 REQKPEVTWSFPFAEGKVFVLTLRAGIDGFHINVGGRHVSSFPYRPGFTIEDATGLAVTG 395

Query: 359 DVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAI 418
           DVDIHS++AT+L  SHPSFS Q+ +E SS+WKA PLP  P  LF+GVLSATNHF+ERMA+
Sbjct: 396 DVDIHSIHATSLSTSHPSFSPQKAIEFSSEWKAPPLPGTPFRLFMGVLSATNHFSERMAV 455

Query: 419 RKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTI 478
           RKTWMQ   IKSS+VVARFFVALNPRKEVNA+LKKEA +FGDIVILPFMDRYELVVLKTI
Sbjct: 456 RKTWMQHPSIKSSDVVARFFVALNPRKEVNAMLKKEAEYFGDIVILPFMDRYELVVLKTI 515

Query: 479 AICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWA 538
           AICEFGVQNVTA YIMKCDDDTFIRV+++LK+I+G+ P++SLYMGNLNL HRPLRTGKW 
Sbjct: 516 AICEFGVQNVTAPYIMKCDDDTFIRVESILKQIDGVSPEKSLYMGNLNLRHRPLRTGKWT 575

Query: 539 VTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTM 598
           VT+EEWP+ VYPPYANGPGY+ISS+IAK+IV Q+    LRLFKMEDVSMG+WVEQFN++M
Sbjct: 576 VTWEEWPEAVYPPYANGPGYIISSNIAKYIVSQNSRHKLRLFKMEDVSMGLWVEQFNASM 635

Query: 599 T-VRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCNFR 646
             V YSHSWKFCQYGC   YYTAHYQSP QM+CLWD L +GR  CCNFR
Sbjct: 636 QPVEYSHSWKFCQYGCTLNYYTAHYQSPSQMMCLWDNLLKGRPQCCNFR 684
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2 Back     alignment and function description
>sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2 Back     alignment and function description
>sp|Q8RX55|B3GTI_ARATH Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1 Back     alignment and function description
>sp|Q8L7F9|B3GTF_ARATH Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1 Back     alignment and function description
>sp|Q9ASW1|B3GTG_ARATH Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y2C3|B3GT5_HUMAN Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9MYM7|B3GT1_PONPY Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|Q7JK26|B3GT1_PANTR Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|Q7JK25|B3GT1_PANPA Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query646
255580453683 transferase, transferring glycosyl group 0.996 0.942 0.810 0.0
225443956669 PREDICTED: probable beta-1,3-galactosylt 0.978 0.944 0.804 0.0
449433561681 PREDICTED: probable beta-1,3-galactosylt 0.993 0.942 0.773 0.0
449528728681 PREDICTED: LOW QUALITY PROTEIN: probable 0.993 0.942 0.772 0.0
356512339683 PREDICTED: probable beta-1,3-galactosylt 0.996 0.942 0.753 0.0
356525116684 PREDICTED: probable beta-1,3-galactosylt 0.996 0.941 0.756 0.0
356555502688 PREDICTED: probable beta-1,3-galactosylt 0.996 0.936 0.730 0.0
356546518688 PREDICTED: probable beta-1,3-galactosylt 0.995 0.934 0.733 0.0
357447201689 ZG10 [Medicago truncatula] gi|355482924| 0.995 0.933 0.742 0.0
224089621545 predicted protein [Populus trichocarpa] 0.843 1.0 0.833 0.0
>gi|255580453|ref|XP_002531052.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223529347|gb|EEF31313.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1110 bits (2870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/645 (81%), Positives = 586/645 (90%), Gaps = 1/645 (0%)

Query: 3   FEIASVLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEDNENQEAPLMPRE 62
            EIA++LSGDD+Y+GLD  LV    DS+L+KP FSSVYKDTFHRKLEDN+NQ AP MP +
Sbjct: 39  LEIAAMLSGDDSYVGLDGALVEDMEDSELTKPLFSSVYKDTFHRKLEDNQNQNAPRMPSK 98

Query: 63  VLLKNGNGGSRPIKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDK 122
             L+   G S+PIKPLQ  YGRITGEI++RRNRTS+ S+LERMADEAWTLGLKAW+EV+K
Sbjct: 99  EPLEEVKGESKPIKPLQHPYGRITGEILKRRNRTSDLSILERMADEAWTLGLKAWEEVEK 158

Query: 123 FDVKETVSSN-VYEGKPESCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAH 181
           +D ++ +  N VY+GK E CPSW+SM G EL+  +++MFLPCGLAAGSSIT+VGTPHYAH
Sbjct: 159 YDDEKEIGQNSVYDGKTEPCPSWVSMKGAELSGEEKMMFLPCGLAAGSSITLVGTPHYAH 218

Query: 182 QEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHN 241
           QE++PQL R RNGD +VMVSQFM+ELQGLK+VDGEDPPKILHLNPR++GDWS +PVIEHN
Sbjct: 219 QEYVPQLARLRNGDGIVMVSQFMIELQGLKAVDGEDPPKILHLNPRLRGDWSKQPVIEHN 278

Query: 242 TCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFIGREQ 301
           TCYRMQWGTAQRCDGL SKKD+DMLVDG LRCEKWMRND+ DSK+SKT SWFKRFIGREQ
Sbjct: 279 TCYRMQWGTAQRCDGLPSKKDEDMLVDGFLRCEKWMRNDIVDSKESKTTSWFKRFIGREQ 338

Query: 302 KPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVD 361
           KPEVTWPFPF EGRLFILTLRAGV+GYHINVGG HVTSFPYR GFTLEDATGLAIKG+VD
Sbjct: 339 KPEVTWPFPFAEGRLFILTLRAGVDGYHINVGGLHVTSFPYRPGFTLEDATGLAIKGEVD 398

Query: 362 IHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIRKT 421
           +HS+YAT+LP+SHP+FS QRVLEMS KWKA PLP  P+ LFIG+LSATNHFAERMA+RKT
Sbjct: 399 VHSIYATSLPSSHPNFSPQRVLEMSEKWKAHPLPKIPIRLFIGILSATNHFAERMAVRKT 458

Query: 422 WMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAIC 481
           WMQSS IKSS+VV RFFVAL+PRKEVNAVLKKEAA+FGDIVILPFMDRYELVVLKTIAIC
Sbjct: 459 WMQSSSIKSSSVVVRFFVALSPRKEVNAVLKKEAAYFGDIVILPFMDRYELVVLKTIAIC 518

Query: 482 EFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAVTY 541
           EFGVQNV+AAYIMKCDDDTF+RV+ VLKEI+GI  K+SLYMGNLNLLHRPLR+GKWAVT+
Sbjct: 519 EFGVQNVSAAYIMKCDDDTFVRVETVLKEIDGISSKKSLYMGNLNLLHRPLRSGKWAVTF 578

Query: 542 EEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMTVR 601
           EEWP+ VYPPYANGPGYVIS DIAKFIV QHGN+SLRLFKMEDVSMGMWVEQFNS+ TV+
Sbjct: 579 EEWPEAVYPPYANGPGYVISYDIAKFIVAQHGNRSLRLFKMEDVSMGMWVEQFNSSRTVQ 638

Query: 602 YSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCNFR 646
           YSH+WKFCQYGCME YYTAHYQSPRQMICLWDKLSRGRA CCNFR
Sbjct: 639 YSHNWKFCQYGCMENYYTAHYQSPRQMICLWDKLSRGRAQCCNFR 683

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225443956|ref|XP_002272405.1| PREDICTED: probable beta-1,3-galactosyltransferase 20 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449433561|ref|XP_004134566.1| PREDICTED: probable beta-1,3-galactosyltransferase 20-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449528728|ref|XP_004171355.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-1,3-galactosyltransferase 20-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356512339|ref|XP_003524877.1| PREDICTED: probable beta-1,3-galactosyltransferase 20-like [Glycine max] Back     alignment and taxonomy information
>gi|356525116|ref|XP_003531173.1| PREDICTED: probable beta-1,3-galactosyltransferase 20-like [Glycine max] Back     alignment and taxonomy information
>gi|356555502|ref|XP_003546070.1| PREDICTED: probable beta-1,3-galactosyltransferase 20-like [Glycine max] Back     alignment and taxonomy information
>gi|356546518|ref|XP_003541673.1| PREDICTED: probable beta-1,3-galactosyltransferase 20-like [Glycine max] Back     alignment and taxonomy information
>gi|357447201|ref|XP_003593876.1| ZG10 [Medicago truncatula] gi|355482924|gb|AES64127.1| ZG10 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224089621|ref|XP_002308783.1| predicted protein [Populus trichocarpa] gi|222854759|gb|EEE92306.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query646
TAIR|locus:2133094741 GALT2 "AGP galactosyltransfera 0.984 0.858 0.695 1.6e-253
TAIR|locus:2205774673 AT1G27120 [Arabidopsis thalian 0.834 0.800 0.610 2.3e-190
TAIR|locus:2172219681 AT5G62620 [Arabidopsis thalian 0.952 0.903 0.562 8.8e-189
TAIR|locus:2027290672 AT1G74800 [Arabidopsis thalian 0.826 0.794 0.607 1.3e-185
TAIR|locus:2200660643 GALT1 "galactosyltransferase1" 0.668 0.671 0.393 1.3e-90
TAIR|locus:2081071619 AT3G06440 [Arabidopsis thalian 0.653 0.681 0.371 9.5e-80
UNIPROTKB|F1MVH6329 B3GALT6 "Uncharacterized prote 0.357 0.702 0.329 2.2e-24
UNIPROTKB|Q96L58329 B3GALT6 "Beta-1,3-galactosyltr 0.379 0.744 0.333 9.8e-24
RGD|1309558325 B3galt6 "UDP-Gal:betaGal beta 0.340 0.676 0.333 9.8e-24
UNIPROTKB|I3LU42323 B3GALT6 "Uncharacterized prote 0.369 0.739 0.325 1.3e-23
TAIR|locus:2133094 GALT2 "AGP galactosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2441 (864.3 bits), Expect = 1.6e-253, P = 1.6e-253
 Identities = 451/648 (69%), Positives = 532/648 (82%)

Query:     4 EIASVLSGDDNYIGLDEKLVGYNGDSDLSKPFFSSVYKDTFHRKLEDNENQEAPLMPREV 63
             E+ ++LSGD    GLD  L     D+ L      S+  D  +RKLED ++Q  P   ++V
Sbjct:   101 EMVAMLSGDT---GLDGAL----SDTSLDVSLSGSLRNDMLNRKLEDEDHQSGPSTTQKV 153

Query:    64 LLKNGNGGSRPIKPLQFRYGRITGEIMRRRNRTSEFSVLERMADEAWTLGLKAWDEVDKF 123
               +    GS+ I+PL FRYGRI+GE+MRRRNRT   S  ERMADEAW LG KAW++VDKF
Sbjct:   154 SPEEKINGSKQIQPLLFRYGRISGEVMRRRNRTIHMSPFERMADEAWILGSKAWEDVDKF 213

Query:   124 DV-KETVSSNVYEGKPESCPSWLSMSGEELANGDRLMFLPCGLAAGSSITVVGTPHYAHQ 182
             +V K   S++++EGK ESCPS +SM+G++L   +R+M LPCGLAAGSSIT++GTP YAH+
Sbjct:   214 EVDKINESASIFEGKVESCPSQISMNGDDLNKANRIMLLPCGLAAGSSITILGTPQYAHK 273

Query:   183 EFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHRPVIEHNT 242
             E +PQ +R      +V+VSQFMVELQGLK+ DGE PPKILHLNPRIKGDW+HRPVIEHNT
Sbjct:   274 ESVPQRSRLTRSYGMVLVSQFMVELQGLKTGDGEYPPKILHLNPRIKGDWNHRPVIEHNT 333

Query:   243 CYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDV---ADSKDSKTASWFKRFIGR 299
             CYRMQWG AQRCDG  SKKD D+LVDG  RCEKW +ND+    DSK+SKT SWFKRFIGR
Sbjct:   334 CYRMQWGVAQRCDGTPSKKDADVLVDGFRRCEKWTQNDIIDMVDSKESKTTSWFKRFIGR 393

Query:   300 EQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGD 359
             EQKPEVTW FPF EG++F+LTLRAG++G+HINVGGRHV+SFPYR GFT+EDATGLA+ GD
Sbjct:   394 EQKPEVTWSFPFAEGKVFVLTLRAGIDGFHINVGGRHVSSFPYRPGFTIEDATGLAVTGD 453

Query:   360 VDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPARPVHLFIGVLSATNHFAERMAIR 419
             VDIHS++AT+L  SHPSFS Q+ +E SS+WKA PLP  P  LF+GVLSATNHF+ERMA+R
Sbjct:   454 VDIHSIHATSLSTSHPSFSPQKAIEFSSEWKAPPLPGTPFRLFMGVLSATNHFSERMAVR 513

Query:   420 KTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIA 479
             KTWMQ   IKSS+VVARFFVALNPRKEVNA+LKKEA +FGDIVILPFMDRYELVVLKTIA
Sbjct:   514 KTWMQHPSIKSSDVVARFFVALNPRKEVNAMLKKEAEYFGDIVILPFMDRYELVVLKTIA 573

Query:   480 ICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRTGKWAV 539
             ICEFGVQNVTA YIMKCDDDTFIRV+++LK+I+G+ P++SLYMGNLNL HRPLRTGKW V
Sbjct:   574 ICEFGVQNVTAPYIMKCDDDTFIRVESILKQIDGVSPEKSLYMGNLNLRHRPLRTGKWTV 633

Query:   540 TYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNSTMT 599
             T+EEWP+ VYPPYANGPGY+ISS+IAK+IV Q+    LRLFKMEDVSMG+WVEQFN++M 
Sbjct:   634 TWEEWPEAVYPPYANGPGYIISSNIAKYIVSQNSRHKLRLFKMEDVSMGLWVEQFNASMQ 693

Query:   600 -VRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRGRAHCCNFR 646
              V YSHSWKFCQYGC   YYTAHYQSP QM+CLWD L +GR  CCNFR
Sbjct:   694 PVEYSHSWKFCQYGCTLNYYTAHYQSPSQMMCLWDNLLKGRPQCCNFR 741
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0010405 "arabinogalactan protein metabolic process" evidence=IDA
GO:0012505 "endomembrane system" evidence=IDA
GO:0018258 "protein O-linked glycosylation via hydroxyproline" evidence=IDA
GO:0035250 "UDP-galactosyltransferase activity" evidence=IDA
TAIR|locus:2205774 AT1G27120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172219 AT5G62620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027290 AT1G74800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200660 GALT1 "galactosyltransferase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081071 AT3G06440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1MVH6 B3GALT6 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q96L58 B3GALT6 "Beta-1,3-galactosyltransferase 6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1309558 B3galt6 "UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|I3LU42 B3GALT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.79LOW CONFIDENCE prediction!
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00028354001
SubName- Full=Chromosome chr10 scaffold_43, whole genome shotgun sequence; (669 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query646
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 1e-130
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 3e-27
pfam00337129 pfam00337, Gal-bind_lectin, Galactoside-binding le 6e-25
cd00070127 cd00070, GLECT, Galectin/galactose-binding lectin 1e-21
smart00908122 smart00908, Gal-bind_lectin, Galactoside-binding l 4e-19
smart00276128 smart00276, GLECT, Galectin 3e-08
PTZ00210382 PTZ00210, PTZ00210, UDP-GlcNAc-dependent glycosylt 2e-06
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 0.001
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  396 bits (1020), Expect = e-130
 Identities = 212/552 (38%), Positives = 305/552 (55%), Gaps = 43/552 (7%)

Query: 104 RMADEAWTLGLKAWDEVDKFDVKETVSSNVYEGKPESCPSWLS-MSGEELANGDRLMFLP 162
           + A  AW   + + +E       E   S++ + K + CP +L+ M+  EL +    + +P
Sbjct: 113 KEAGVAWESLMASVEEEKLGYTNE---SSLRKSKEKQCPYFLNKMNATELGDSGYKLKIP 169

Query: 163 CGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGE-DPPKI 221
           CGL  GSSIT++G P               +G    ++  F ++L G + + GE DPP I
Sbjct: 170 CGLTQGSSITIIGIP---------------DG----LLGNFRIDLTG-EPLPGEPDPPII 209

Query: 222 LHLNPRIKGD-WSHRPVIEHNTCYRMQ-WGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRN 279
           LH N R+ GD  +  PVI  NT      WG  +RC      K+    VD   +C K +  
Sbjct: 210 LHYNVRLLGDKITEDPVIVQNTWTAAHDWGEEERCPSPDPDKNKK--VDDLDQCNKMVGR 267

Query: 280 DVADSKDSKTASWFKRFIG-REQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVT 338
           D      +   S   R     ++  +    FPF +G L + TLR G EG  + V G+H+T
Sbjct: 268 DDKRVLSTSLHSNGSRRSPMSQEATKARRYFPFKQGYLSVATLRVGTEGIQMTVDGKHIT 327

Query: 339 SFPYRTGFTLED--ATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLPA 396
           SF YR   TLE    + + I GD+ + SV A+ LP S  S   + V+++ +  K+ PL  
Sbjct: 328 SFAYRE--TLEPWLVSEVRISGDLKLISVLASGLPTSEDS---EHVIDLEA-LKSPPLSP 381

Query: 397 -RPVHLFIGVLSATNHFAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEA 455
            +P+ LFIGV S  N+F  RMA+R+TWMQ   ++S  V  RFFV L+  + VN  L  EA
Sbjct: 382 KKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEA 441

Query: 456 AFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEGIF 515
             +GDI ++PF+D Y L+  KT+AIC FG + V+A Y+MK DDD F+RVD VL  ++   
Sbjct: 442 RTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRTN 501

Query: 516 PKRSLYMGNLNLLHRPLRT--GKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHG 573
               L  G +N   +P R    KW ++ EEWP+E YPP+A+GPGYV+S DIAK +  +H 
Sbjct: 502 VSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRHK 561

Query: 574 NQSLRLFKMEDVSMGMWV-EQFNSTMTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLW 632
              L++FK+EDV+MG+W+ E     + V+Y +  +    GC +GY  AHYQSPR+M+CLW
Sbjct: 562 EGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNEGCKDGYVVAHYQSPREMLCLW 621

Query: 633 DKLSRG-RAHCC 643
            KL  G RA CC
Sbjct: 622 QKLQEGKRATCC 633

Length = 636
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215865 pfam00337, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|238025 cd00070, GLECT, Galectin/galactose-binding lectin Back     alignment and domain information
>gnl|CDD|214904 smart00908, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|214596 smart00276, GLECT, Galectin Back     alignment and domain information
>gnl|CDD|140237 PTZ00210, PTZ00210, UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 646
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
smart00276128 GLECT Galectin. Galectin - galactose-binding lecti 99.97
PF00337133 Gal-bind_lectin: Galactoside-binding lectin; Inter 99.96
cd00070127 GLECT Galectin/galactose-binding lectin. This doma 99.96
KOG3587143 consensus Galectin, galactose-binding lectin [Extr 99.92
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.74
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.62
PLN03153 537 hypothetical protein; Provisional 99.1
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.7
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 95.29
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 94.52
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 93.95
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 93.81
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 93.06
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 92.46
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 91.84
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 91.52
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 91.28
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 90.62
cd06423180 CESA_like CESA_like is the cellulose synthase supe 90.32
PRK11204 420 N-glycosyltransferase; Provisional 90.12
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 90.01
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 89.93
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 89.77
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 89.62
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 89.26
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 89.26
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 89.18
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 89.18
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 88.53
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 88.4
PRK14583 444 hmsR N-glycosyltransferase; Provisional 88.34
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 88.18
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 87.99
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 87.91
COG1215 439 Glycosyltransferases, probably involved in cell wa 87.24
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 86.87
COG1216305 Predicted glycosyltransferases [General function p 85.51
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 84.41
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 83.55
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 83.47
cd04188211 DPG_synthase DPG_synthase is involved in protein N 80.62
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 80.27
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.8e-131  Score=1100.93  Aligned_cols=521  Identities=39%  Similarity=0.690  Sum_probs=480.5

Q ss_pred             hhHHHHHHHHHHHHHHhHhhhhcccc-c-cccC--CCCCCCCCCCCCcee-cccccccCCCeEEEcCCCCCCCcEEEEEE
Q 006408          101 VLERMADEAWTLGLKAWDEVDKFDVK-E-TVSS--NVYEGKPESCPSWLS-MSGEELANGDRLMFLPCGLAAGSSITVVG  175 (646)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~~~~~~~cp~sv~-~~~~~~~~~~~~~~lP~GL~~Gs~itV~G  175 (646)
                      .....|.+||+||+.||++|.+++++ . ...+  +..+.++.+||+||+ ++++++.+++|++.|||||++|++|||+|
T Consensus       103 ~~~~~~~~~~~~~~~aw~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~~~~~~~~~~~~~~~~~~iP~GL~~Gs~ItI~G  182 (636)
T PLN03133        103 QVLPNGVEAIKEAGVAWESLMASVEEEKLGYTNESSLRKSKEKQCPYFLNKMNATELGDSGYKLKIPCGLTQGSSITIIG  182 (636)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCCchhhhhcccccccCCceEEecCCcCCCCCEEEEEE
Confidence            36678999999999999999998773 2 2222  223567789999999 69999988899999999999999999999


Q ss_pred             EcCCCcccccchhhhccCCCCcceeeeEEEEecCCcCCCCCCCCeeEEEccccCCCCC-CCCEEEEeccc-CCcccceee
Q 006408          176 TPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWS-HRPVIEHNTCY-RMQWGTAQR  253 (646)
Q Consensus       176 ~p~~~~~~~~~~~~~~~~~~~~~~~~~F~i~L~g~~~~~~~~~~i~LH~NpRl~~d~~-~~pvIv~Nt~~-~~~WG~eeR  253 (646)
                      +|+..+                   ++|+|||+|+...+++++||||||||||++||+ ++|+||||||+ +|+||.|||
T Consensus       183 ~p~~~~-------------------~~F~InL~g~~~~g~~~~~iaLHfNpRf~gd~~t~~~vIV~NT~~~~~~WG~EER  243 (636)
T PLN03133        183 IPDGLL-------------------GNFRIDLTGEPLPGEPDPPIILHYNVRLLGDKITEDPVIVQNTWTAAHDWGEEER  243 (636)
T ss_pred             EeCCCC-------------------CeEEEEEeecCcCCCCCCCEEEEEcCccCCCccccCCEEEeCCCcCCCcccHhhh
Confidence            999754                   499999999876666788999999999999975 79999999999 999999999


Q ss_pred             cCCCCCCCCCCccccchhhhhhccccCccccccccccccccccc-cccCCCCCCCCCCCCCCCeEEEEEEEccceEEEEe
Q 006408          254 CDGLSSKKDDDMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFI-GREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINV  332 (646)
Q Consensus       254 c~~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~fPF~~G~~F~lti~~g~egf~v~V  332 (646)
                      |++|+|++|+  +||||++||||+++++.++++++++||++|+| ++++++..+|+|||++|++|++||+||.|||||+|
T Consensus       244 c~~~~~~~~~--~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~lti~~g~egf~v~V  321 (636)
T PLN03133        244 CPSPDPDKNK--KVDDLDQCNKMVGRDDKRVLSTSLHSNGSRRSPMSQEATKARRYFPFKQGYLSVATLRVGTEGIQMTV  321 (636)
T ss_pred             cCCCCccccc--cccchhhhhhhhcccccccccccccccccccccccccccccccCCCCCCCCcEEEEEEecCCEEEEEE
Confidence            9999999995  79999999999999999999999999999998 77889999999999999999999999999999999


Q ss_pred             CCeEEEEeecccCcCcccceEEEEecccceeeeecccCCCCCCCcchhhhhhhhhhhccCCCC-CCCceEEEEEeCCCCC
Q 006408          333 GGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPASHPSFSLQRVLEMSSKWKAEPLP-ARPVHLFIGVLSATNH  411 (646)
Q Consensus       333 nG~h~~sF~yR~~~~l~~v~~l~v~GDv~l~sV~a~slP~s~~sf~p~~~~e~~~~~kapp~p-~~~v~LlI~V~Sap~~  411 (646)
                      ||+|+|+|+||+++++|.|++|+|+|||+|+||.+.++|.+|++    .+..+.+.|++||++ +++++|||+|+|+++|
T Consensus       322 nG~H~tsF~yR~~lep~~V~~l~V~GDv~l~SV~a~~~p~~~~~----~~~~d~e~lkAppL~~~~~~~LlI~V~Sap~n  397 (636)
T PLN03133        322 DGKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLPTSEDS----EHVIDLEALKSPPLSPKKPLDLFIGVFSTANN  397 (636)
T ss_pred             CCeEEEeeeCCCCCCccceeEEEEeCcEEEEEEEeeCCCCCCch----hcccchHHhcCCCCCCCCceEEEEEEeCCccc
Confidence            99999999999998999999999999999999999999999986    577789999999988 5679999999999999


Q ss_pred             HHHHHHHHHHhhcccccCCCceEEEEEEeeCCChhHHHHHHHHHhhcCcEEEEeecccccchhHHHHHHHhhhhhcCCce
Q 006408          412 FAERMAIRKTWMQSSKIKSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAA  491 (646)
Q Consensus       412 ~~rR~aIR~TW~~~~~i~~~~v~~~FfVG~~~~~~~~~~L~~Eae~ygDII~~df~DsY~nLtlKtl~~l~wa~~~~~ak  491 (646)
                      |+||+|||+|||+...+++..++++||||.+.+..++..|++|+++|+|||++||.|+|+|+|+||++++.|+.+|++++
T Consensus       398 f~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~~c~~ak  477 (636)
T PLN03133        398 FKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAK  477 (636)
T ss_pred             HHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHHHHhCCCce
Confidence            99999999999998776677899999999999999999999999999999999999999999999999999999888999


Q ss_pred             EEEEecCCccccHHHHHHHHhhcCCCcceEEEeeccCCCcccc--ccceeccccCCCCCCCCCCCCCeEEeCHHHHHHHH
Q 006408          492 YIMKCDDDTFIRVDAVLKEIEGIFPKRSLYMGNLNLLHRPLRT--GKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIV  569 (646)
Q Consensus       492 fvmKvDDDtfVnvd~Ll~~L~~~~~~~~lY~G~v~~~~~P~R~--sKWyVs~eeyp~~~YPpY~~G~GYVLSrdla~~Iv  569 (646)
                      ||||+|||+|||+++|+++|+.....+.+|+|++..+.+|+|+  +|||||+++||++.|||||+|+|||||+|+|++|+
T Consensus       478 FilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~eyp~~~YPpYasG~gYVlS~Dla~~L~  557 (636)
T PLN03133        478 YVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVY  557 (636)
T ss_pred             EEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHHHCCCCCCCCCCCcCEEEEcHHHHHHHH
Confidence            9999999999999999999988776778999999999999997  99999999999999999999999999999999999


Q ss_pred             HHhcCCccCCCCCChHHHHHHHHHcCCC-CCcccccCCCcccCCcCCceEEEecCCHHHHHHHHHHhcCC-CCCCCCCC
Q 006408          570 LQHGNQSLRLFKMEDVSMGMWVEQFNST-MTVRYSHSWKFCQYGCMEGYYTAHYQSPRQMICLWDKLSRG-RAHCCNFR  646 (646)
Q Consensus       570 ~~~~~~~l~~f~~EDV~iGi~l~~lgi~-~pV~y~h~~r~c~~~C~~~~it~H~~sP~~M~~lW~~l~~~-~~~Cc~~~  646 (646)
                      .+..+..+++|++||||||+|+++++.. .++.|.|+.++|..+|..++|++|+++|++|+++|++|+++ +++||+++
T Consensus       558 ~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~~~~C~~~~i~~H~~sP~eM~~lW~~l~~~~~~~Cc~~~  636 (636)
T PLN03133        558 KRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNEGCKDGYVVAHYQSPREMLCLWQKLQEGKRATCCGEW  636 (636)
T ss_pred             HhhhhcccCcCChhhHhHHHHHHHhcccCCCceeeCCCcccCCcCCCCeEEEecCCHHHHHHHHHHHhccCCCCccCCC
Confidence            8754567899999999999999876532 35788899999999999999999999999999999999965 59999975

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00276 GLECT Galectin Back     alignment and domain information
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements Back     alignment and domain information
>cd00070 GLECT Galectin/galactose-binding lectin Back     alignment and domain information
>KOG3587 consensus Galectin, galactose-binding lectin [Extracellular structures] Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query646
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 8e-24
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 5e-21
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 2e-20
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 3e-20
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 4e-20
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 4e-20
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 2e-19
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 6e-19
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 3e-18
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 4e-18
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 5e-18
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 4e-17
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 8e-17
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 1e-15
1is3_A135 Congerin II; complex with lactose and MES, sugar b 1e-16
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 3e-16
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 5e-14
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 7e-14
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 6e-13
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 2e-10
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 8e-10
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 7e-04
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
 Score = 97.4 bits (242), Expect = 8e-24
 Identities = 36/213 (16%), Positives = 59/213 (27%), Gaps = 81/213 (38%)

Query: 161 LPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPK 220
           L   +  G ++ V G  +   +                    F V+L       G+    
Sbjct: 23  LNTPMGPGRTVVVKGEVNANAK-------------------SFNVDLLA-----GKSKDI 58

Query: 221 ILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRND 280
            LHLNPR+     +      N+  +  WG  +R                           
Sbjct: 59  ALHLNPRL-----NIKAFVRNSFLQESWGEEERNIT------------------------ 89

Query: 281 VADSKDSKTASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSF 340
                                       FPF  G  F + +   V  + + V G H   +
Sbjct: 90  ---------------------------SFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEY 122

Query: 341 PYRTGFTLEDATGLAIKGDVDIHSVYATNLPAS 373
            +R    L     L I GD+ +  V + + P+S
Sbjct: 123 KHRFK-ELSSIDTLEINGDIHLLEVRSWSGPSS 154
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Length = 138 Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Length = 154 Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Length = 138 Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 164 Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Length = 164 Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Length = 148 Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} PDB: 3nv2_A* 3nv3_A* 3nv4_A* Length = 138 Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Length = 159 Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Length = 144 Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Length = 142 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Length = 135 Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Length = 134 Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Length = 129 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Length = 137 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Length = 132 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} Length = 135 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Length = 134 Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Length = 164 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query646
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 100.0
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 100.0
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 100.0
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 100.0
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 100.0
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 100.0
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 100.0
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 99.98
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 99.98
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 99.98
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 99.97
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 99.97
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 99.97
1is3_A135 Congerin II; complex with lactose and MES, sugar b 99.97
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 99.97
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.97
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 99.97
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 99.97
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.97
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 99.96
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.96
2wkk_A150 Galectin-2; sugar-binding protein, secreted, cell 99.96
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.96
1ww7_A160 Galectin; carbohydrate recognition domain,X-RAY cr 99.92
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 99.92
4agr_A146 Galectin; sugar binding protein; 2.10A {Cinachyrel 99.91
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.89
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 93.78
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 92.55
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 91.71
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 91.44
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 88.07
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=7e-34  Score=271.24  Aligned_cols=138  Identities=26%  Similarity=0.397  Sum_probs=127.2

Q ss_pred             CCeEEEcCCCCCCCcEEEEEEEcCCCcccccchhhhccCCCCcceeeeEEEEecCCcCCCCCCCCeeEEEccccCCCCCC
Q 006408          155 GDRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSH  234 (646)
Q Consensus       155 ~~~~~~lP~GL~~Gs~itV~G~p~~~~~~~~~~~~~~~~~~~~~~~~~F~i~L~g~~~~~~~~~~i~LH~NpRl~~d~~~  234 (646)
                      .||...|||||.+|++|+|.|+|...++                   +|.|||+++.     .++|+|||||||+++   
T Consensus        17 vPf~~~ip~gl~~G~~i~I~G~v~~~~~-------------------rF~Inl~~g~-----~~dialHfnpRf~~~---   69 (155)
T 2yro_A           17 LPFAARLNTPMGPGRTVVVKGEVNANAK-------------------SFNVDLLAGK-----SKDIALHLNPRLNIK---   69 (155)
T ss_dssp             SSEEEECSSCCCTTCEEEEEEEECTTCC-------------------CEEEEEEETT-----TTEEEEEEECCSSSC---
T ss_pred             cCEeeecCCCCccCCEEEEEEEECCCCC-------------------EEEEEEecCC-----CCCEEEEEEEEcCCC---
Confidence            4899999999999999999999998655                   9999999843     257999999999986   


Q ss_pred             CCEEEEecccCCcccceeecCCCCCCCCCCccccchhhhhhccccCccccccccccccccccccccCCCCCCCCCCCCCC
Q 006408          235 RPVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFIGREQKPEVTWPFPFVEG  314 (646)
Q Consensus       235 ~pvIv~Nt~~~~~WG~eeRc~~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G  314 (646)
                        +||+||+.+|.||.|||+.                                                   ..|||.+|
T Consensus        70 --~IV~Ns~~~g~Wg~EEr~~---------------------------------------------------~~fPF~~G   96 (155)
T 2yro_A           70 --AFVRNSFLQESWGEEERNI---------------------------------------------------TSFPFSPG   96 (155)
T ss_dssp             --CCEEEEECSSCBCCCCCCC---------------------------------------------------SCCCCCTT
T ss_pred             --EEEEEcccCCEeccceeeC---------------------------------------------------CCccccCC
Confidence              8999999999999999993                                                   24699999


Q ss_pred             CeEEEEEEEccceEEEEeCCeEEEEeecccCcCcccceEEEEecccceeeeecccCCCC
Q 006408          315 RLFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYATNLPAS  373 (646)
Q Consensus       315 ~~F~lti~~g~egf~v~VnG~h~~sF~yR~~~~l~~v~~l~v~GDv~l~sV~a~slP~s  373 (646)
                      ++|+|+|+++.++|+|+|||+|+++|+||.. ++++|+.|.|.|||+|++|.+.++|+|
T Consensus        97 ~~F~l~I~~~~~~f~V~VNg~~~~~F~hR~~-pl~~I~~l~I~Gdv~l~~V~~~~~~~~  154 (155)
T 2yro_A           97 MYFEMIIYCDVREFKVAVNGVHSLEYKHRFK-ELSSIDTLEINGDIHLLEVRSWSGPSS  154 (155)
T ss_dssp             SEEEEEEEECSSEEEEEETTEEEEEEECCCS-CGGGCCEEEEEESEEEEEEEEECCCCC
T ss_pred             CeEEEEEEEcCCEEEEEECCEEEEEecCcCC-CHHHCcEEEEeCCEEEEEEEEecCCCC
Confidence            9999999999999999999999999999984 679999999999999999999999886
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A* Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Back     alignment and structure
>4agr_A Galectin; sugar binding protein; 2.10A {Cinachyrella} PDB: 4agg_A 4agv_A Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 646
d1lcla_141 b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein 2e-20
d2nn8a1137 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo s 8e-19
d2gala_133 b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [Ta 4e-17
d1w6na_134 b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [Ta 1e-13
d1is3a_134 b.29.1.3 (A:) Congerin II {Conger eel (Conger myri 8e-13
d1c1la_135 b.29.1.3 (A:) Congerin I {Conger eel (Conger myria 2e-11
d1hlca_129 b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo s 1e-10
d1qmja_132 b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) 5e-07
d1ulea_150 b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprino 1e-05
d1a78a_134 b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [Ta 3e-05
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Charcot-Leyden crystal (CLC) protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (212), Expect = 2e-20
 Identities = 23/205 (11%), Positives = 46/205 (22%), Gaps = 79/205 (38%)

Query: 161 LPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPK 220
               L+ GS++T+ G P                           V+     +   E+   
Sbjct: 9   EAASLSTGSTVTIKGRPLVCFLN----------------EPYLQVDFH---TEMKEESDI 49

Query: 221 ILHLNPRIKGDWSHRPVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRND 280
           + H              +  N+     W                                
Sbjct: 50  VFHFQVCFGR------RVVMNSREYGAWKQQVES-------------------------- 77

Query: 281 VADSKDSKTASWFKRFIGREQKPEVTWPFPFVEGRLFILTLRAGVEGYHINVGGRHVTSF 340
                                        PF +G+ F L++    + Y + V G+   +F
Sbjct: 78  --------------------------KNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTF 111

Query: 341 PYRTGFTLEDATGLAIKGDVDIHSV 365
            +R     E    + +  D+ +   
Sbjct: 112 DHR--IKPEAVKMVQVWRDISLTKF 134
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Length = 137 Back     information, alignment and structure
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 134 Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 134 Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 135 Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Length = 129 Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 132 Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Length = 150 Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Length = 134 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query646
d2gala_133 Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2nn8a1137 Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606] 99.98
d1lcla_141 Charcot-Leyden crystal (CLC) protein {Human (Homo 99.97
d1w6na_134 Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} 99.96
d1hlca_129 S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId 99.96
d1qmja_132 Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} 99.96
d1is3a_134 Congerin II {Conger eel (Conger myriaster) [TaxId: 99.96
d1c1la_135 Congerin I {Conger eel (Conger myriaster) [TaxId: 99.95
d1a78a_134 Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} 99.95
d1ulea_150 Galectin-2 {Inky cap fungus (Coprinopsis cinerea) 99.92
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 90.57
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Galectin-7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-32  Score=253.83  Aligned_cols=131  Identities=25%  Similarity=0.390  Sum_probs=121.6

Q ss_pred             CeEEEcCCCCCCCcEEEEEEEcCCCcccccchhhhccCCCCcceeeeEEEEecCCcCCCCCCCCeeEEEccccCCCCCCC
Q 006408          156 DRLMFLPCGLAAGSSITVVGTPHYAHQEFLPQLTRRRNGDSLVMVSQFMVELQGLKSVDGEDPPKILHLNPRIKGDWSHR  235 (646)
Q Consensus       156 ~~~~~lP~GL~~Gs~itV~G~p~~~~~~~~~~~~~~~~~~~~~~~~~F~i~L~g~~~~~~~~~~i~LH~NpRl~~d~~~~  235 (646)
                      ||...||+||.+|++|+|.|++...++                   +|.|||+.+.   .++++|+|||||||+.+    
T Consensus         2 Pf~~~lp~gl~~G~~i~i~G~~~~~~~-------------------~F~inl~~~~---~~~~di~~Hfn~Rf~~~----   55 (133)
T d2gala_           2 PHKSSLPEGIRPGTVLRIRGLVPPNAS-------------------RFHVNLLCGE---EQGSDAALHFNPRLDTS----   55 (133)
T ss_dssp             CEEEECTTCCCTTCEEEEEEECCTTCC-------------------BEEEEEESSS---STTCCEEEEEEEETTTT----
T ss_pred             CEeeecCCCCCCCCEEEEEEEECCCCC-------------------EEEEEEEeCC---CCCCCEEEEEeeEcCCC----
Confidence            789999999999999999999998765                   9999999753   34568999999999876    


Q ss_pred             CEEEEecccCCcccceeecCCCCCCCCCCccccchhhhhhccccCccccccccccccccccccccCCCCCCCCCCCCCCC
Q 006408          236 PVIEHNTCYRMQWGTAQRCDGLSSKKDDDMLVDGNLRCEKWMRNDVADSKDSKTASWFKRFIGREQKPEVTWPFPFVEGR  315 (646)
Q Consensus       236 pvIv~Nt~~~~~WG~eeRc~~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~  315 (646)
                       .||+||+.+|.||.|||+                                                    ..|||.+|+
T Consensus        56 -~IV~Ns~~~g~Wg~Eer~----------------------------------------------------~~~Pf~~G~   82 (133)
T d2gala_          56 -EVVFNSKEQGSWGREERG----------------------------------------------------PGVPFQRGQ   82 (133)
T ss_dssp             -EEEEEEEETTEECCCEEC----------------------------------------------------SSCCCCTTC
T ss_pred             -EEEEECCcCCeECCceEE----------------------------------------------------CCCCCCCCC
Confidence             899999999999999999                                                    379999999


Q ss_pred             eEEEEEEEccceEEEEeCCeEEEEeecccCcCcccceEEEEecccceeeeec
Q 006408          316 LFILTLRAGVEGYHINVGGRHVTSFPYRTGFTLEDATGLAIKGDVDIHSVYA  367 (646)
Q Consensus       316 ~F~lti~~g~egf~v~VnG~h~~sF~yR~~~~l~~v~~l~v~GDv~l~sV~a  367 (646)
                      +|+|+|.++.++|+|+|||+|+++|+||.  +++.|+.|.|.||++|++|..
T Consensus        83 ~F~l~I~~~~~~f~V~vng~~~~~F~~R~--p~~~i~~l~i~Gdv~l~~V~i  132 (133)
T d2gala_          83 PFEVLIIASDDGFKAVVGDAQYHHFRHRL--PLARVRLVEVGGDVQLDSVRI  132 (133)
T ss_dssp             EEEEEEEECSSEEEEEETTEEEEEEECSS--CGGGCCEEEEEESCEEEEEEE
T ss_pred             eeEEEEEECCCEEEEEECCeeEEEecCcC--ChhhccEEEEECCEEEEEEEE
Confidence            99999999999999999999999999999  789999999999999999963
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure