Citrus Sinensis ID: 006413

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640------

MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPILVISDKIAQHSAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP

ccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHcccccccccccccccccccEEEEEEcccccccHHHEEEHHHHcccccccEEEEEEEccccHHHHHHHHHHccccccEEEEEEccccccccccccHHHHHHccccccEEEEEEEccccccccccccccccHHHHHHHHccccccccccEEEEEEccEEEccccHHHHcccccccEEEEEcccccHHHHHHcccccccHHHHccccccccccccccEEEEHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHcccccEEccccccccccccccccccccccccEEEEEcccccccccccccccHHHHccccccccHHHHHccccc

cHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccHHcccHHHHccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEHHHHHHHHHHcccHHHcccccHHHccccccEEEEEEcccHHHHEEEEHHHHHcccccccEEEEEEEccccHHHHHHHHHHccccccEEEEEEccccccccccccHHHHHHccHHHHHHEEcccccccccccccccHHHHHHHHHHHHHHHHHcHHccEEEEEcccEEEEEccHHHHcEcccccEcccHHHHHHHHHHHHHHcccccHHHHccccccHHHHHcccEEEcHHHHHHHcHHHHHHHHHHHcccccEEHcccccccEEEEcccccccccccEEEcccccccccHHHHHccEEEEEccccccHHHHccHcccHHHHHHcccccHHHHHccccc

MKTRNLVVGMLCATVLAPILIFtstfkdsypsssesgefledltaftvggdarhlnllpqessttlslkqpiLVISdkiaqhsahsqsqsqgswehKSARVLSAttngldqsktdnpirqvtdlTKTQINKHADQEQIKASDNHISAHHSqildtkhqqessltygvlekkeptkinnekqteqttppdfrVRQLKDQLIKAKVYlslpamrnnANFVRELRLRIKEVQRAlgdatkdsdlprIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTaktlpkglhclplrltteyytlnssqrhfpnqekledprlfhyaLFSDNVLAAAVVVNSTVthakhpsnhvFHIVTDRLNYAAMRMWFlanppgratvQVQNIEEFtwlnssyspvlkqlnSQSMIDYYFRAhransdsnlkfrnpkyLSILNHLRFYlpevfprlnkvlfldddvVVQKDLSglwsidlkgkvngavetcgetfhrfdrylnfsnplisknfdpracgwaygmnifdldewrrQNITDVYHTWQkmnhdrqlwklgtlppglitfwkrtypldrfwhvlglgynpsvnqrdIERAAVIHYngnmkpwleinipkyrnywtkhvdydqLYLRECNINP

MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPILVISDKIAQHSAhsqsqsqgsweHKSARVLSATtngldqsktdnpirqvtDLTKTQINKHADQEQIKASDNHISAHHSqildtkhqqeSSLTYgvlekkeptkinnekqteqttppdfrvRQLKDQLIKAkvylslpamrnnANFVRELRLRIKEVQralgdatkdsdlpriANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLtaktlpkglhclPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVthakhpsnhvfHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRansdsnlkfRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSglwsidlkgkvNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP

MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPILVISDKIaqhsahsqsqsqGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP

****NLVVGMLCATVLAPILIFTSTFKD**********FLEDLTAFTVGGDARHLNLL*********LKQPILVI*********************************************************************************************************************RQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRA******************************IQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSS*********LEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECN***

**TRNLVVGMLCATVLAPILIFTSTFK*****************AFTVGGDARHL**************************************************************************************************************************************FRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIK**************************EQSLAKGKQIQDDCAAVVKKLRAMLHSTE******KKQTLFLTQLTAKTLPKGLHCLPLRLTTEY********************LFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNI**

MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPILVISDKI*******************ARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKKEPTKIN********TPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP

MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTV*G**RHLNLLPQE*STTLSLKQPILVISDK******************************************************************************************EKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP

iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPILVISDKIAQHSAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFxxxxxxxxxxxxxxxxxxxxxSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVxxxxxxxxxxxxxxxxxxxxxTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		646	2.2.26 [Sep-21-2011]
Q93ZX7		616	Probable galacturonosyltr	yes	no	0.950	0.996	0.690	0.0
Q9LE59		673	Polygalacturonate 4-alpha	no	no	0.705	0.677	0.628	0.0
Q0WQD2		680	Probable galacturonosyltr	no	no	0.707	0.672	0.582	1e-165
Q9ZPZ1		528	Putative galacturonosyltr	no	no	0.659	0.806	0.522	1e-136
Q8RXE1		610	Probable galacturonosyltr	no	no	0.894	0.947	0.414	1e-136
Q9LSG3		559	Galacturonosyltransferase	no	no	0.659	0.762	0.502	1e-134
Q9M9Y5		589	Probable galacturonosyltr	no	no	0.890	0.976	0.390	1e-131
Q949Q1		537	Probable galacturonosyltr	no	no	0.743	0.893	0.474	1e-129
Q9SKT6		536	Probable galacturonosyltr	no	no	0.724	0.873	0.480	1e-124
Q9FWA4		561	Probable galacturonosyltr	no	no	0.625	0.720	0.537	1e-122

>sp\|Q93ZX7\|GAUT4_ARATH Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana GN=GAUT4 PE=2 SV=1	Back alignment and function desciption

 Score =  912 bits (2358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/646 (69%), Positives = 516/646 (79%), Gaps = 32/646 (4%)

Query: 1   MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQ 60
           +K RNLV+  +  TV+A IL++T     S+ +     +FLED+TA T   D   LNLLP+
Sbjct: 3   VKLRNLVLFFMLLTVVAHILLYTDP-AASFKTPFSKRDFLEDVTALTFNSDENRLNLLPR 61

Query: 61  ESSTTLSLKQPILVISDKIAQHSAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPIRQ 120
           ES   L       V SDK ++             +  SARVLSAT +    S TD  I+Q
Sbjct: 62  ESPAVLRGGLVGAVYSDKNSRR-----------LDQLSARVLSATDDD-THSHTDISIKQ 109

Query: 121 VTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKKEPTKINNEK 180
           VT                 ASD+HI+  +  +  T+   E      V E+ EP     +K
Sbjct: 110 VT--------------HDAASDSHINRENMHVQLTQQTSEK-----VDEQPEPNAFGAKK 150

Query: 181 QTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSD 240
            T     PD +VR LKDQLI+AKVYLSLP+ + NA+FVRELRLRIKEVQRAL DA+KDSD
Sbjct: 151 DTGNVLMPDAQVRHLKDQLIRAKVYLSLPSAKANAHFVRELRLRIKEVQRALADASKDSD 210

Query: 241 LPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAK 300
           LP+ A ++LKAMEQ+LAKGKQIQDDC+ VVKKLRAMLHS +EQLRVHKKQT+FLTQLTAK
Sbjct: 211 LPKTAIEKLKAMEQTLAKGKQIQDDCSTVVKKLRAMLHSADEQLRVHKKQTMFLTQLTAK 270

Query: 301 TLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVT 360
           T+PKGLHCLPLRLTT+YY LNSS++ FPNQEKLED +L+HYALFSDNVLA +VVVNST+T
Sbjct: 271 TIPKGLHCLPLRLTTDYYALNSSEQQFPNQEKLEDTQLYHYALFSDNVLATSVVVNSTIT 330

Query: 361 HAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNS 420
           +AKHP  HVFHIVTDRLNYAAMRMWFL NPPG+AT+QVQN+EEFTWLNSSYSPVLKQL+S
Sbjct: 331 NAKHPLKHVFHIVTDRLNYAAMRMWFLDNPPGKATIQVQNVEEFTWLNSSYSPVLKQLSS 390

Query: 421 QSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDL 480
           +SMIDYYFRAH  NSD+NLKFRNPKYLSILNHLRFYLPE+FP+L+KVLFLDDD+VVQKDL
Sbjct: 391 RSMIDYYFRAHHTNSDTNLKFRNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQKDL 450

Query: 481 SGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEW 540
           SGLWS+DLKG VNGAVETCGE+FHRFDRYLNFSNPLISKNFDPRACGWAYGMN+FDLDEW
Sbjct: 451 SGLWSVDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPRACGWAYGMNVFDLDEW 510

Query: 541 RRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRD 600
           +RQNIT+VYH WQ +N DR+LWKLGTLPPGLITFW+RTYPLDR WH+LGLGYNPSVNQRD
Sbjct: 511 KRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLGYNPSVNQRD 570

Query: 601 IERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP 646
           IERAAVIHYNGN+KPWLEI IP+YR +W+KHVDY+ +YLRECNINP
Sbjct: 571 IERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP 616

May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q9LE59\|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1	Back alignment and function description

>sp\|Q0WQD2\|GAUT3_ARATH Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana GN=GAUT3 PE=2 SV=2	Back alignment and function description

>sp\|Q9ZPZ1\|GAUT2_ARATH Putative galacturonosyltransferase 2 OS=Arabidopsis thaliana GN=GAUT2 PE=5 SV=1	Back alignment and function description

>sp\|Q8RXE1\|GAUT5_ARATH Probable galacturonosyltransferase 5 OS=Arabidopsis thaliana GN=GAUT5 PE=2 SV=1	Back alignment and function description

>sp\|Q9LSG3\|GAUT8_ARATH Galacturonosyltransferase 8 OS=Arabidopsis thaliana GN=GAUT8 PE=1 SV=1	Back alignment and function description

>sp\|Q9M9Y5\|GAUT6_ARATH Probable galacturonosyltransferase 6 OS=Arabidopsis thaliana GN=GAUT6 PE=2 SV=1	Back alignment and function description

>sp\|Q949Q1\|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1	Back alignment and function description

>sp\|Q9SKT6\|GAUTA_ARATH Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2	Back alignment and function description

>sp\|Q9FWA4\|GAUT9_ARATH Probable galacturonosyltransferase 9 OS=Arabidopsis thaliana GN=GAUT9 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		646
255568510		647	Glycosyltransferase QUASIMODO1, putative	0.984	0.982	0.728	0.0
359496846		1286	PREDICTED: uncharacterized protein LOC10	0.956	0.480	0.719	0.0
296080851		638	unnamed protein product [Vitis vinifera]	0.956	0.968	0.719	0.0
147766034		759	hypothetical protein VITISV_038741 [Viti	0.956	0.814	0.717	0.0
224124762		665	glycosyltransferase, CAZy family GT8 [Po	0.979	0.951	0.703	0.0
356564442		1469	PREDICTED: uncharacterized protein LOC10	0.978	0.430	0.682	0.0
18422837		616	alpha-1,4-galacturonosyltransferase [Ara	0.950	0.996	0.690	0.0
10177914		615	unnamed protein product [Arabidopsis tha	0.950	0.998	0.690	0.0
356532890		657	PREDICTED: probable galacturonosyltransf	0.987	0.971	0.667	0.0
357448171		667	Galacturonosyltransferase [Medicago trun	0.992	0.961	0.666	0.0

>gi\|255568510\|ref\|XP_002525229.1\| Glycosyltransferase QUASIMODO1, putative [Ricinus communis] gi\|223535526\|gb\|EEF37195.1\| Glycosyltransferase QUASIMODO1, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/655 (72%), Positives = 548/655 (83%), Gaps = 19/655 (2%)

Query: 1   MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDAR-HLNLLP 59
           MK RNLVVGML  TV+API+++T     ++ SSS + EFLED+ + T+ GD+R HLN+LP
Sbjct: 3   MKLRNLVVGMLLVTVIAPIILYTDNRFSTFNSSSSTTEFLEDVASLTLSGDSRDHLNVLP 62

Query: 60  QESSTTLSLKQPILVI----SDKIAQHSA----HSQSQSQGSWEHKSARVLSATTNGLDQ 111
           QES++ L  K+PI ++    S     H++    HS    Q + EHKS RVLSAT N   Q
Sbjct: 63  QESTSLL--KEPIGIVYTDNSTISPPHTSTIQFHSSPLPQDTREHKSTRVLSAT-NDQHQ 119

Query: 112 SKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKK 171
           S+TD  IRQVT+   ++    A+ +  K + +   + ++ +      Q+SSLT   + +K
Sbjct: 120 SQTDTIIRQVTNQQASRTTD-ANNKNSKQNPSDGGSQNAVV------QQSSLTSEKVTEK 172

Query: 172 EPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRA 231
            P K   +KQT QT  PD RVRQL+DQLI+AKVYLSLP+ +NN +F RELRLRIKEVQR 
Sbjct: 173 GPPKSRTDKQTAQTPVPDARVRQLRDQLIRAKVYLSLPSTKNNPHFTRELRLRIKEVQRV 232

Query: 232 LGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291
           LGDATKDSDLP+ AND+LKAM+QSLAKGKQ+QDDCA+VVKKLRAMLHS+EEQLRVHKKQT
Sbjct: 233 LGDATKDSDLPKNANDKLKAMDQSLAKGKQVQDDCASVVKKLRAMLHSSEEQLRVHKKQT 292

Query: 292 LFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAA 351
           +FLTQLTAKTLPKGLHC PLRLT EYY+LNSSQ+ FPNQEKLEDP+L+HYALFSDNVLAA
Sbjct: 293 MFLTQLTAKTLPKGLHCFPLRLTNEYYSLNSSQQQFPNQEKLEDPQLYHYALFSDNVLAA 352

Query: 352 AVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSY 411
           AVVVNST+THAK PS HVFHIVTDRLNYAAMRMWFL NPPG+AT+QVQNIEE TWLNSSY
Sbjct: 353 AVVVNSTITHAKDPSKHVFHIVTDRLNYAAMRMWFLVNPPGQATIQVQNIEELTWLNSSY 412

Query: 412 SPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLD 471
           SPVLKQL SQSMIDYYFR HRANSDSNLK+RNPKYLSILNHLRFYLPE+FP LNKVLFLD
Sbjct: 413 SPVLKQLGSQSMIDYYFRTHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPMLNKVLFLD 472

Query: 472 DDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYG 531
           DD+VVQKDL+GLWS+DLKG VNGAVETCGE FHRFDRYLNFSNPLISKNFDP ACGWAYG
Sbjct: 473 DDIVVQKDLTGLWSLDLKGNVNGAVETCGERFHRFDRYLNFSNPLISKNFDPHACGWAYG 532

Query: 532 MNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLG 591
           MN+FDLD+W+RQNIT VYHTWQK+NHDR LWKLGTLPPGLITFWK+TY +DR WHVLGLG
Sbjct: 533 MNVFDLDQWKRQNITGVYHTWQKLNHDRLLWKLGTLPPGLITFWKQTYSIDRSWHVLGLG 592

Query: 592 YNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP 646
           YNP+VNQR+IERAAVIHYNGN+KPWLEI I KYRNYW K+VDYD +YLRECNINP
Sbjct: 593 YNPNVNQREIERAAVIHYNGNLKPWLEIGISKYRNYWAKYVDYDHVYLRECNINP 647

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359496846\|ref\|XP_002272372.2\| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|296080851\|emb\|CBI18781.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147766034\|emb\|CAN70213.1\| hypothetical protein VITISV_038741 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224124762\|ref\|XP_002329942.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi\|222871964\|gb\|EEF09095.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356564442\|ref\|XP_003550463.1\| PREDICTED: uncharacterized protein LOC100794732 [Glycine max]	Back alignment and taxonomy information

>gi|18422837|ref|NP_568688.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi|75163841|sp|Q93ZX7.1|GAUT4_ARATH RecName: Full=Probable galacturonosyltransferase 4; AltName: Full=Like glycosyl transferase 3 gi|15810327|gb|AAL07051.1| unknown protein [Arabidopsis thaliana] gi|20259235|gb|AAM14333.1| unknown protein [Arabidopsis thaliana] gi|332008188|gb|AED95571.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|10177914\|dbj\|BAB11325.1\| unnamed protein product [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356532890\|ref\|XP_003535002.1\| PREDICTED: probable galacturonosyltransferase 4-like isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|357448171\|ref\|XP_003594361.1\| Galacturonosyltransferase [Medicago truncatula] gi\|355483409\|gb\|AES64612.1\| Galacturonosyltransferase [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		646
TAIR\|locus:2160957		616	GAUT4 "galacturonosyltransfera	0.811	0.850	0.758	2e-241
TAIR\|locus:2098836		673	GAUT1 "galacturonosyltransfera	0.834	0.800	0.557	3.4e-171
TAIR\|locus:2121753		680	GAUT3 "galacturonosyltransfera	0.834	0.792	0.513	2e-150
TAIR\|locus:2039934		528	GAUT2 "galacturonosyltransfera	0.464	0.568	0.529	2.6e-132
TAIR\|locus:2090210		559	QUA1 "QUASIMODO 1" [Arabidopsi	0.606	0.701	0.556	1.5e-125
TAIR\|locus:504955915		610	LGT5 "los glycosyltransferase	0.489	0.518	0.422	4.5e-124
TAIR\|locus:2051426		536	GAUT10 "galacturonosyltransfer	0.724	0.873	0.482	5.7e-123
TAIR\|locus:2074572		561	GAUT9 "galacturonosyltransfera	0.634	0.730	0.535	5.7e-123
TAIR\|locus:2027453		537	GAUT11 "galacturonosyltransfer	0.744	0.895	0.475	5.8e-121
TAIR\|locus:2102082		533	GAUT13 "galacturonosyltransfer	0.611	0.741	0.461	3.7e-96

TAIR\|locus:2160957 GAUT4 "galacturonosyltransferase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2209 (782.7 bits), Expect = 2.0e-241, Sum P(2) = 2.0e-241
 Identities = 406/535 (75%), Positives = 464/535 (86%)

Query:   112 SKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKK 171
             S TD+     TD++  Q+   A      ASD+HI+  +  +  T+   E      V E+ 
Sbjct:    93 SATDDDTHSHTDISIKQVTHDA------ASDSHINRENMHVQLTQQTSEK-----VDEQP 141

Query:   172 EPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRA 231
             EP     +K T     PD +VR LKDQLI+AKVYLSLP+ + NA+FVRELRLRIKEVQRA
Sbjct:   142 EPNAFGAKKDTGNVLMPDAQVRHLKDQLIRAKVYLSLPSAKANAHFVRELRLRIKEVQRA 201

Query:   232 LGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291
             L DA+KDSDLP+ A ++LKAMEQ+LAKGKQIQDDC+ VVKKLRAMLHS +EQLRVHKKQT
Sbjct:   202 LADASKDSDLPKTAIEKLKAMEQTLAKGKQIQDDCSTVVKKLRAMLHSADEQLRVHKKQT 261

Query:   292 LFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAA 351
             +FLTQLTAKT+PKGLHCLPLRLTT+YY LNSS++ FPNQEKLED +L+HYALFSDNVLA 
Sbjct:   262 MFLTQLTAKTIPKGLHCLPLRLTTDYYALNSSEQQFPNQEKLEDTQLYHYALFSDNVLAT 321

Query:   352 AVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSY 411
             +VVVNST+T+AKHP  HVFHIVTDRLNYAAMRMWFL NPPG+AT+QVQN+EEFTWLNSSY
Sbjct:   322 SVVVNSTITNAKHPLKHVFHIVTDRLNYAAMRMWFLDNPPGKATIQVQNVEEFTWLNSSY 381

Query:   412 SPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLD 471
             SPVLKQL+S+SMIDYYFRAH  NSD+NLKFRNPKYLSILNHLRFYLPE+FP+L+KVLFLD
Sbjct:   382 SPVLKQLSSRSMIDYYFRAHHTNSDTNLKFRNPKYLSILNHLRFYLPEIFPKLSKVLFLD 441

Query:   472 DDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYG 531
             DD+VVQKDLSGLWS+DLKG VNGAVETCGE+FHRFDRYLNFSNPLISKNFDPRACGWAYG
Sbjct:   442 DDIVVQKDLSGLWSVDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPRACGWAYG 501

Query:   532 MNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLG 591
             MN+FDLDEW+RQNIT+VYH WQ +N DR+LWKLGTLPPGLITFW+RTYPLDR WH+LGLG
Sbjct:   502 MNVFDLDEWKRQNITEVYHRWQDLNQDRELWKLGTLPPGLITFWRRTYPLDRKWHILGLG 561

Query:   592 YNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP 646
             YNPSVNQRDIERAAVIHYNGN+KPWLEI IP+YR +W+KHVDY+ +YLRECNINP
Sbjct:   562 YNPSVNQRDIERAAVIHYNGNLKPWLEIGIPRYRGFWSKHVDYEHVYLRECNINP 616

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016051 "carbohydrate biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS

GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS

TAIR\|locus:2098836 GAUT1 "galacturonosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121753 GAUT3 "galacturonosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2039934 GAUT2 "galacturonosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2090210 QUA1 "QUASIMODO 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504955915 LGT5 "los glycosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2051426 GAUT10 "galacturonosyltransferase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074572 GAUT9 "galacturonosyltransferase 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2027453 GAUT11 "galacturonosyltransferase 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2102082 GAUT13 "galacturonosyltransferase 13" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93ZX7	GAUT4_ARATH	2, ., 4, ., 1, ., -	0.6904	0.9504	0.9967	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00011843001	SubName- Full=Chromosome undetermined scaffold_342, whole genome shotgun sequence; (613 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00036829001	RecName- Full=Pectinesterase; EC=3.1.1.11; (364 aa)	•	0.899
	GSVIVG00036367001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (308 aa)	•	0.899
	GSVIVG00035359001	RecName- Full=Pectinesterase; EC=3.1.1.11; (299 aa)	•	0.899
	GSVIVG00033995001	RecName- Full=Pectinesterase; EC=3.1.1.11; (581 aa)	•	0.899
	GSVIVG00033942001	SubName- Full=Chromosome undetermined scaffold_71, whole genome shotgun sequence; (237 aa)	•	0.899
	GSVIVG00031642001	SubName- Full=Chromosome chr5 scaffold_58, whole genome shotgun sequence; (451 aa)	•	0.899
	GSVIVG00028034001	RecName- Full=Pectinesterase; EC=3.1.1.11; (465 aa)	•	0.899
	GSVIVG00026410001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (418 aa)	•	0.899
	GSVIVG00026388001	RecName- Full=Pectinesterase; EC=3.1.1.11; (513 aa)	•	0.899
	GSVIVG00022688001	RecName- Full=Pectinesterase; EC=3.1.1.11; (477 aa)	•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		646
PLN02829		639	PLN02829, PLN02829, Probable galacturonosyltransfe	0.0
PLN02910		657	PLN02910, PLN02910, polygalacturonate 4-alpha-gala	0.0
PLN02718		603	PLN02718, PLN02718, Probable galacturonosyltransfe	0.0
PLN02742		534	PLN02742, PLN02742, Probable galacturonosyltransfe	0.0
PLN02523		559	PLN02523, PLN02523, galacturonosyltransferase	0.0
PLN02769		629	PLN02769, PLN02769, Probable galacturonosyltransfe	1e-152
PLN02870		533	PLN02870, PLN02870, Probable galacturonosyltransfe	1e-136
cd06429		257	cd06429, GT8_like_1, GT8_like_1 represents a subfa	1e-126
PLN02659		534	PLN02659, PLN02659, Probable galacturonosyltransfe	1e-123
PLN02867		535	PLN02867, PLN02867, Probable galacturonosyltransfe	1e-119
pfam01501		248	pfam01501, Glyco_transf_8, Glycosyl transferase fa	1e-74
cd04194		248	cd04194, GT8_A4GalT_like, A4GalT_like proteins cat	4e-20
cd00505		246	cd00505, Glyco_transf_8, Members of glycosyltransf	7e-17
COG1442		325	COG1442, RfaJ, Lipopolysaccharide biosynthesis pro	3e-10

>gnl\|CDD\|215443 PLN02829, PLN02829, Probable galacturonosyltransferase	Back alignment and domain information

 Score = 1138 bits (2944), Expect = 0.0
 Identities = 482/648 (74%), Positives = 547/648 (84%), Gaps = 13/648 (2%)

Query: 1   MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQ 60
           M+ RNLV+G+L  TVL+PIL++T     S+ + S   +FLED+TA T+GGDA  LN+LPQ
Sbjct: 3   MRLRNLVLGLLLLTVLSPILLYTDRLSASF-TPSSKRDFLEDVTALTLGGDASKLNVLPQ 61

Query: 61  ESSTTLSLKQPI-LVISDKIAQH-SAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPI 118
           ESS++L  K+PI +V SD  ++     SQ           ARVLSAT +    S+TD+ I
Sbjct: 62  ESSSSL--KEPIGIVYSDNSSKTIEPDSQDLLLDKRGEHKARVLSATDDD-THSQTDDII 118

Query: 119 RQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYGVLEKKEPTKINN 178
           +QVT             +  +   N  S   SQ    +H Q+S+ T   +++KEP     
Sbjct: 119 KQVTQKA-------GQDDSDQQEKNSQSQSASQAESLEHVQQSAQTSEKVDEKEPLLTKT 171

Query: 179 EKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKD 238
           +KQT+QT  PD RVRQL+DQLIKAKVYLSLPA + N +F RELRLRIKEVQR LGDA+KD
Sbjct: 172 DKQTDQTVMPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASKD 231

Query: 239 SDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLT 298
           SDLP+ AN++LKAMEQ+LAKGKQ+QDDC+ VVKKLRAMLHS EEQLRVHKKQT+FLTQLT
Sbjct: 232 SDLPKNANEKLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLT 291

Query: 299 AKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNST 358
           AKTLPKGLHCLPLRLTTEYY LNSS++ FPNQEKLEDP+L+HYALFSDNVLAAAVVVNST
Sbjct: 292 AKTLPKGLHCLPLRLTTEYYNLNSSEQQFPNQEKLEDPQLYHYALFSDNVLAAAVVVNST 351

Query: 359 VTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQL 418
           VT+AKHPS HVFHIVTDRLNYAAMRMWFL NPPG+AT+QVQNIEEFTWLNSSYSPVLKQL
Sbjct: 352 VTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSSYSPVLKQL 411

Query: 419 NSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQK 478
            SQSMIDYYFRAHRANSDSNLK+RNPKYLSILNHLRFYLPE+FP+LNKVLFLDDD+VVQK
Sbjct: 412 GSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQK 471

Query: 479 DLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLD 538
           DL+GLWSIDLKG VNGAVETCGE+FHRFDRYLNFSNPLISKNFDP ACGWAYGMN+FDLD
Sbjct: 472 DLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLD 531

Query: 539 EWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQ 598
           EW+RQNIT+VYH+WQK+NHDRQLWKLGTLPPGLITFWKRTYPLDR WHVLGLGYNP+VNQ
Sbjct: 532 EWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQ 591

Query: 599 RDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP 646
           RDIERAAVIHYNGNMKPWLEI IPKYRNYW+K+VDYDQ+YLRECNINP
Sbjct: 592 RDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQVYLRECNINP 639

Length = 639

>gnl\|CDD\|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178320 PLN02718, PLN02718, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215395 PLN02742, PLN02742, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215286 PLN02523, PLN02523, galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215412 PLN02769, PLN02769, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215468 PLN02870, PLN02870, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>gnl\|CDD\|215356 PLN02659, PLN02659, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178458 PLN02867, PLN02867, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8	Back alignment and domain information

>gnl\|CDD\|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>gnl\|CDD\|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>gnl\|CDD\|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		646
PLN02829		639	Probable galacturonosyltransferase	100.0
PLN02718		603	Probable galacturonosyltransferase	100.0
PLN02910		657	polygalacturonate 4-alpha-galacturonosyltransferas	100.0
PLN02742		534	Probable galacturonosyltransferase	100.0
PLN02769		629	Probable galacturonosyltransferase	100.0
PLN02870		533	Probable galacturonosyltransferase	100.0
PLN02523		559	galacturonosyltransferase	100.0
PLN02867		535	Probable galacturonosyltransferase	100.0
PLN02659		534	Probable galacturonosyltransferase	100.0
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	100.0
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	100.0
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	100.0
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	100.0
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	100.0
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	100.0
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	100.0
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	99.98
cd06432		248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	99.97
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	99.92
PLN00176		333	galactinol synthase	99.9
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	99.7
KOG1879		1470	consensus UDP-glucose:glycoprotein glucosyltransfe	99.05
COG5597		368	Alpha-N-acetylglucosamine transferase [Cell envelo	97.84
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	94.28
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	93.77

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

Probab=100.00  E-value=3.8e-172  Score=1409.08  Aligned_cols=634  Identities=76%  Similarity=1.209  Sum_probs=605.6

Q ss_pred             CchhhHHHHHHHHHhhhheeeeeccccccCCCCccchhhhhhhhhccccCCCccccccccCccccccccCCe-EEEeccc
Q 006413            1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPI-LVISDKI   79 (646)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (646)
                      |+.|++||+||||||+|||+|||+||++.| ||++++||+|||+++++++|+.+||+||||+++  +||||+ |||+|++
T Consensus         3 ~~~r~~~~~~l~~~v~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~lk~p~~~~~~~~~   79 (639)
T PLN02829          3 MRLRNLVLGLLLLTVLSPILLYTDRLSASF-TPSSKRDFLEDVTALTLGGDASKLNVLPQESSS--SLKEPIGIVYSDNS   79 (639)
T ss_pred             HHHHHHHHHHHHHHHhhceeEEeccccccc-CCcchhhhhHHHHhhccCccchhcccccccccc--cccCceeEEeeccc
Confidence            678999999999999999999999999966 999999999999999999999999999999999  999999 9999998


Q ss_pred             ccc--cccccccccCccccccccceeccccCCCCCCCCCcccccccchhhhhccccchhhhhhccccccccccccccccc
Q 006413           80 AQH--SAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKH  157 (646)
Q Consensus        80 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (646)
                      ++.  ...++++++|.+||| +||||++ +++++|++|++|+|||+...+....+.+       .|+.+.+.++..++..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  150 (639)
T PLN02829         80 SKTIEPDSQDLLLDKRGEHK-ARVLSAT-DDDTHSQTDDIIKQVTQKAGQDDSDQQE-------KNSQSQSASQAESLEH  150 (639)
T ss_pred             cccccccccccccccccchh-hhhcccc-ccccccccchhHHHhhhccccccccccc-------ccccccccccccchhh
Confidence            773  457899999999999 9999997 5569999999999999866443322221       2355566778888999


Q ss_pred             cccccccccccccCCccccccccccCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCC
Q 006413          158 QQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATK  237 (646)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~  237 (646)
                      .|++.+++++.++++|..++++++++.++|+|++||+|||||||||||++|||++||++|+||||++|||+||+||+|++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~  230 (639)
T PLN02829        151 VQQSAQTSEKVDEKEPLLTKTDKQTDQTVMPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASK  230 (639)
T ss_pred             hhhhhccccccccccccccccccccccccCchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChhHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccccccchhh
Q 006413          238 DSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEY  317 (646)
Q Consensus       238 d~~l~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~l~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey  317 (646)
                      |+|||+++.++|++|+++|++||+++|||+++++|||||++++||++++||+|++||+||||+|+|||||||+||||+||
T Consensus       231 d~~lp~~~~~~~~~m~~~i~~ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~q~~~l~~laa~t~PK~lHCL~mrLt~Ey  310 (639)
T PLN02829        231 DSDLPKNANEKLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEY  310 (639)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCccCCCCCCCcCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEE
Q 006413          318 YTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQ  397 (646)
Q Consensus       318 ~~~~~~~~~~p~~~~l~d~~~iHIa~~sDnvlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~  397 (646)
                      |.+++.++++|++++++||+++|||+|||||+|++|||||++.|+++|+++|||||||++||.+|++||++||+++|+|+
T Consensus       311 ~~~~~~~~~~p~~~~l~dp~l~Hy~ifSdNVLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~  390 (639)
T PLN02829        311 YNLNSSEQQFPNQEKLEDPQLYHYALFSDNVLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQ  390 (639)
T ss_pred             HhCChhhccCCChhhccCCccceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccchhhcccccchhhhhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeec
Q 006413          398 VQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQ  477 (646)
Q Consensus       398 v~nie~F~~l~~~y~p~L~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~  477 (646)
                      |+++|+|+|++.+|+|+++|+++..+++|||+.+..++..++++|+|+|+|+++|+|||||++||+++||||||+||||+
T Consensus       391 V~nie~f~wln~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVq  470 (639)
T PLN02829        391 VQNIEEFTWLNSSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQ  470 (639)
T ss_pred             EEehhhcccccccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeC
Confidence            99999999999999999999999999999998877677788999999999999999999999999999999999999999


Q ss_pred             cCchhhhccCCCCCeeeeeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcC
Q 006413          478 KDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH  557 (646)
Q Consensus       478 ~DLseLw~iDL~gkviAAVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~  557 (646)
                      +||++||++||+|+++|||+||...|++|..|++|++|.+..+|+++.||||+|||||||++||++++|++++.|++.+.
T Consensus       471 gDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~  550 (639)
T PLN02829        471 KDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNH  550 (639)
T ss_pred             CChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHcc
Confidence            99999999999999999999999888899999999999988899999999999999999999999999999999999988


Q ss_pred             CcccccCCCCchhhhhhccccccccCcceeecCCCCCCCcccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcc
Q 006413          558 DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQL  637 (646)
Q Consensus       558 ~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~  637 (646)
                      ++.+|++|+||+++++|+|++++||++||++|+||++.+.++.+++|+||||+|++|||.+.++++|+++|.+|++++++
T Consensus       551 ~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~KPWle~~i~~yr~lW~kYl~~~~~  630 (639)
T PLN02829        551 DRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQV  630 (639)
T ss_pred             CCccccccCCChHHHHhcCceEecChhheecCCCCCcccchhcccCCeEEEECCCCCccccCCcccchHHHHHHHhcCch
Confidence            88899999999999999999999999999999999998888899999999999999999999999999999999999999


Q ss_pred             hhhhccCCC
Q 006413          638 YLRECNINP  646 (646)
Q Consensus       638 fl~~cni~~  646 (646)
                      |||+|||||
T Consensus       631 fl~~Cni~p  639 (639)
T PLN02829        631 YLRECNINP  639 (639)
T ss_pred             HHHhCCCCC
Confidence            999999998

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02870 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02523 galacturonosyltransferase	Back alignment and domain information

>PLN02867 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02659 Probable galacturonosyltransferase	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		646
1ss9_A		311	Crystal Structural Analysis Of Active Site Mutant Q		6e-04

>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311

Back alignment and structure

Iteration: 1

Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 30/191 (15%) Query: 443 NPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET 502 N +++SI + R L E +KVL+LD DV+V+ L+ LW DL GA C + Sbjct: 75 NIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGA---CIDL 131 Query: 503 FHRFDRYLNFSNPLISKNFDPRACGWAY---GMNIFDLDEWRRQNITDVYHTWQKMNHDR 559 F +R + + A G Y G+ + +L +WRR +I + W + D Sbjct: 132 F--VERQEGYKQKI------GMADGEYYFNAGVLLINLKKWRRHDIFKMSCEWVEQYKDV 183 Query: 560 QLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQ----------RD----IERAA 605 ++ + GL Y RF + + Y N+ RD + A Sbjct: 184 MQYQDEDILNGLFKG-GVCYANSRF-NFMPTNYAFMANRFASRHTDPLYRDRTNTVMPVA 241 Query: 606 VIHYNGNMKPW 616 V HY G KPW Sbjct: 242 VSHYCGPAKPW 252

PyMOL of 1ss9

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		646
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	7e-60
3tzt_A		276	Glycosyl transferase family 8; structural genomics	2e-25
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	4e-05

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311	Back alignment and structure

 Score =  201 bits (514), Expect = 7e-60
 Identities = 51/308 (16%), Positives = 96/308 (31%), Gaps = 60/308 (19%)

Query: 340 HYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQ 397
                +D+       V   S        +   FH++   ++ A           G   ++
Sbjct: 2   DIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNIR 60

Query: 398 VQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYL 457
             ++    +                                    N +++SI  + R  L
Sbjct: 61  FIDVNPEDFAGFPL-------------------------------NIRHISITTYARLKL 89

Query: 458 PEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV-ETCGETFHRFDRYLNFSNPL 516
            E     +KVL+LD DV+V+  L+ LW  DL     GA  +   E    + + +  ++  
Sbjct: 90  GEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG- 148

Query: 517 ISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWK 576
                      +  G+ + +L +WRR +I  +   W +   D   ++   +  GL  F  
Sbjct: 149 --------EYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGL--FKG 198

Query: 577 RTYPLDRFWHVLGLGYNPSVN--------------QRDIERAAVIHYNGNMKPWLEINIP 622
                +  ++ +   Y    N                 +   AV HY G  KPW      
Sbjct: 199 GVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA 258

Query: 623 KYRNYWTK 630
                +T+
Sbjct: 259 WGAERFTE 266

PyMOL of 1g9r

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Length = 263	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		646
3tzt_A		276	Glycosyl transferase family 8; structural genomics	100.0
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	100.0
1ll2_A		333	Glycogenin-1; protein-substrate complex, beta-alph	99.92
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	99.89

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

Probab=100.00  E-value=6e-45  Score=375.29  Aligned_cols=258  Identities=18%  Similarity=0.214  Sum_probs=185.2

Q ss_pred             ceEEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhh
Q 006413          338 LFHYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVL  415 (646)
Q Consensus       338 ~iHIa~~sDn--vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L  415 (646)
                      .+|||+++|+  +.+++|+|+|++.|+++ ++++|||++++++.+..+.....-...+..|+++.++. ++         
T Consensus         5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~-~~---------   73 (276)
T 3tzt_A            5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATD-DL---------   73 (276)
T ss_dssp             CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-------------
T ss_pred             eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCH-HH---------
Confidence            5999999996  47899999999999986 58999999999987654333221112356677766532 00         


Q ss_pred             hhhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhccCCCCCeee
Q 006413          416 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVNG  494 (646)
Q Consensus       416 ~ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~-ldKVLYLDsDvIV~~DLseLw~iDL~gkviA  494 (646)
                                  |.        .  .+..+++|.++|+||++|+++|+ ++||||||+|+||++||++||++|++|+++|
T Consensus        74 ------------~~--------~--~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~a  131 (276)
T 3tzt_A           74 ------------FS--------F--AKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILA  131 (276)
T ss_dssp             --------------------------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEE
T ss_pred             ------------Hh--------c--CccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEE
Confidence                        00        0  01124678999999999999995 9999999999999999999999999999999


Q ss_pred             eeccccccccccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhh
Q 006413          495 AVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITF  574 (646)
Q Consensus       495 AVeDc~~~~~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F  574 (646)
                      ||+||+...  ...+.+      ..+++...||||||||||||++||+.++++++++|++.+.....  .++|+++|.+|
T Consensus       132 av~d~~~~~--~~~~~~------~~~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~~--~~DQd~LN~~f  201 (276)
T 3tzt_A          132 AASHTGKTD--MANNVN------RIRLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNLL--LPDQDILNAMY  201 (276)
T ss_dssp             EEEC----------------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHH
T ss_pred             EEEecccch--HHHHHH------HhcCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcccccc--CCChhHHHHHH
Confidence            999997431  111110      11344446999999999999999999999999999987764332  35666677899


Q ss_pred             ccccccccC-cceeecCCCCC-----CCc----ccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccCcchh
Q 006413          575 WKRTYPLDR-FWHVLGLGYNP-----SVN----QRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYL  639 (646)
Q Consensus       575 ~g~i~~Ld~-~WN~~~lgy~~-----~i~----~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~~~fl  639 (646)
                      .|++++||. +||+++ |+..     ..+    ....++|+||||+|+.|||...+.++|+++||+|+++..++|
T Consensus       202 ~~~~~~Lp~~~wN~~~-~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~w~~Y~~~~~~~~  275 (276)
T 3tzt_A          202 GDRIYPLDDLIYNYDA-RNYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRNKFTSLYKHYMSLTKRYL  275 (276)
T ss_dssp             GGGEEEEEHHHHSEET-TCHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCCSTTHHHHHHHHHHHHHHT
T ss_pred             hCCEEECCchheeeec-ccchhhhccccchhhhhhhccCCeEEEECCCCCCcCCCCCCchHHHHHHHHHHHHHhh
Confidence            999999998 999996 3220     001    123457999999999999999999999999999999888776

PyMOL of 3tzt

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		646
d1ga8a_		282	c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri	2e-29
d1ll2a_		263	c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun	2e-10

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  116 bits (290), Expect = 2e-29
 Identities = 55/302 (18%), Positives = 98/302 (32%), Gaps = 57/302 (18%)

Query: 344 FSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEE 403
             DN  A   V   +V  A   +   FH++   ++ A           G   ++  ++  
Sbjct: 7   ADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNP 66

Query: 404 FTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR 463
             +                                    N +++SI  + R  L E    
Sbjct: 67  EDFAG-------------------------------FPLNIRHISITTYARLKLGEYIAD 95

Query: 464 LNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV-ETCGETFHRFDRYLNFSNPLISKNFD 522
            +KVL+LD DV+V+  L+ LW  DL     GA  +   E    + + +  ++     N  
Sbjct: 96  CDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFN-- 153

Query: 523 PRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLD 582
                   G+ + +L +WRR +I  +   W +   D   ++   +  GL  F       +
Sbjct: 154 -------AGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGL--FKGGVCYAN 204

Query: 583 RFWHVLGLGYNPSVN--------------QRDIERAAVIHYNGNMKPWLEINIPKYRNYW 628
             ++ +   Y    N                 +   AV HY G  KPW           +
Sbjct: 205 SRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERF 264

Query: 629 TK 630
           T+
Sbjct: 265 TE 266

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		646
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	100.0
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	99.92
d1o7qa_		287	alpha-1,3-galactosyltransferase catalytic domain {	82.93

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=3.9e-41  Score=341.36  Aligned_cols=254  Identities=19%  Similarity=0.235  Sum_probs=193.6

Q ss_pred             eEEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEEeccchhhcccccchhhh
Q 006413          339 FHYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK  416 (646)
Q Consensus       339 iHIa~~sDn--vlaasVvInSil~N~~~pe~ivFHIVtd~ln~~~mk~wf~~n~~~~atI~v~nie~F~~l~~~y~p~L~  416 (646)
                      ||||+++|.  +.+++|+|+|++.|+++ .+++|||++++++.+........-...+..|.++.++.-.         +.
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~---------~~   70 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPED---------FA   70 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGG---------GT
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchH---------hc
Confidence            699999996  46899999999998876 5899999999999877555443222334556665543210         00


Q ss_pred             hhccccceEEEecccccCCCCccccCCCCcchhhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeeee
Q 006413          417 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV  496 (646)
Q Consensus       417 ql~s~~~~~~~F~~~~~~~~~~lk~r~~~yiS~~ty~Rf~IPeiLP~ldKVLYLDsDvIV~~DLseLw~iDL~gkviAAV  496 (646)
                                           ... ...+++|.++|+||++|++||+++||||||+||||.+||++||++|++++.+|||
T Consensus        71 ---------------------~~~-~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~  128 (282)
T d1ga8a_          71 ---------------------GFP-LNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGAS  128 (282)
T ss_dssp             ---------------------TSC-CCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEE
T ss_pred             ---------------------ccc-ccccccCHHHHHHHHHhhhCCccceEEEecCCEEEecchHHHHhcccccceeeee
Confidence                                 000 1235788999999999999999999999999999999999999999999999999


Q ss_pred             ccccccc-cccccccccCCcccccCCCCCCCccccceeecccHHHHHhhHHHHHHHHHHHcCCcccccCCCCchhhhhhc
Q 006413          497 ETCGETF-HRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFW  575 (646)
Q Consensus       497 eDc~~~~-~r~~~yLnfs~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~k~n~~~~l~dqg~Ln~~ll~F~  575 (646)
                      .|+.... ..+...+         ++....+||||||||||+++||+.+++++++++++.+.....+  ++|+++|.+|.
T Consensus       129 ~d~~~~~~~~~~~~~---------~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~~~~~--~DQd~LN~~f~  197 (282)
T d1ga8a_         129 IDLFVERQEGYKQKI---------GMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQY--QDQDILNGLFK  197 (282)
T ss_dssp             ECHHHHTSTTHHHHT---------TCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSS--THHHHHHHHHT
T ss_pred             hhhhhhhhhhhHHHh---------CCCCCCceeecceeeechhhhhhhhHHHHHHHHHHhcccCccc--CchhHHHHHhc
Confidence            9975321 1111112         3445689999999999999999999999999999877554322  34445667899


Q ss_pred             cccccccCcceeecCCCCCCC--------c------ccccCCCeEEEccCCCCCcccCCccchHHHHHHHhccC
Q 006413          576 KRTYPLDRFWHVLGLGYNPSV--------N------QRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYD  635 (646)
Q Consensus       576 g~i~~Ld~~WN~~~lgy~~~i--------~------~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~~  635 (646)
                      |++..||.+||++..+|....        .      .....+++||||+|+.|||...+.+.+.+.|++|++..
T Consensus       198 ~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~~~~~~~~~~~~~~  271 (282)
T d1ga8a_         198 GGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSL  271 (282)
T ss_dssp             TSEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCSTTTHHHHHHHTTC
T ss_pred             CCEEeCCHHHeeccccccccccccccccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCChhHHHHHHHHHhh
Confidence            999999999999864332110        0      12346789999999999999998889999999998654

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure