Citrus Sinensis ID: 006551

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-

MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

cccccccccccHHHHHHHHHHHcHHcccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccccccccccccccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccccccHHHccccccccccccccHHHHHccccccccccccccccccccccccccccHHHcHHHHHHHHHHHHHcccccccccHHHHHHHEEcccccHHHHHHHHcc

ccccccccccccHHHHHHHHHHcHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHcccHHHHHHHHcccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccccccccccccccHcEEEEHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHccccccccccccccccEEEEEEccccEccccccccEEcccccccccccccccccccEEccHccHHHHHHHHHHHHHHHHHHHHHccHHHHHccEEEEEEEcccccHHHHHHHHHHc

mdifdglpispekAYLREELARIEVswvaprfdslphVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMhemddevpTTVAVAYTtnnsqplsrrtrlkgdnqfgvhgladgshsstfdghdedgsleahdetsldglsigwlanstpdEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAqtgttglhfmkgqlrsyqlpkqkrqngislsgtllavspvsalmapMGKAQAAAKELLDSILDSVVRIFENHVVVGELLesrssrhdintpksmiadanwnpdseasvtggySIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLaskapskekrdgsedgltfafrftdatisipnqgADLIrqgwsrrgtnvlqegygtaavlpEQGIYLAASIYRPVLQFTDKVAsmlpqkysqLGIFVTCicmgncgslFFLFCQIIW

mdifdglpispEKAYLREELARIEVSwvaprfdslPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKrrlgtrnkqlhqlwYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYttnnsqplsrrtrLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVgellesrssrhdintpksmiadanwnpdSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARlaskapskekrdgsedGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNdiieevvdevvHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

************KAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAY****************************************************GLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS****IG****TGTTGLHFMKGQL*************ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELL***************************SVTGGYSIGFSMTVLQSECQQLICEILRAT*******************************LTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

*******************LARIEVSWVAPRFDSLPHVV******************NDIIEEVVDEVVHAYHTGFNKAIQNYSQI*******************************L*QLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYS**********************************************************************************************SDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQ**********************************************LLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLE*****************ANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEIL*****************************************************************************LPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATP****************************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

***FDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHE*********************S*****KGDN**********************************************DEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIG**A*T*TTGL***KGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPD***S*TGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAV*T*RLAS************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

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MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLxxxxxxxxxxxxxxxxxxxxxxxxxxxxLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGIFVTCICMGNCGSLFFLFCQIIW

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		641	2.2.26 [Sep-21-2011]
Q93YU5		1053	Probable exocyst complex	yes	no	0.960	0.584	0.733	0.0
Q96A65		974	Exocyst complex component	yes	no	0.330	0.217	0.297	2e-17
O35382		975	Exocyst complex component	yes	no	0.255	0.168	0.321	3e-17
Q62824		975	Exocyst complex component	yes	no	0.255	0.168	0.321	3e-17
Q9HE88		1111	Probable exocyst complex	N/A	no	0.268	0.154	0.290	2e-15
Q54P76		1182	Exocyst complex component	yes	no	0.321	0.174	0.253	3e-14
Q9VNH6		985	Exocyst complex component	yes	no	0.252	0.164	0.280	2e-10
P32855		1065	Exocyst complex component	yes	no	0.304	0.183	0.228	2e-06
Q9XWS2		893	Exocyst complex component	yes	no	0.218	0.156	0.212	0.0005

>sp\|Q93YU5\|EXOC4_ARATH Probable exocyst complex component 4 OS=Arabidopsis thaliana GN=SEC8 PE=1 SV=1	Back alignment and function desciption

 Score =  893 bits (2308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/638 (73%), Positives = 537/638 (84%), Gaps = 22/638 (3%)

Query: 1   MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
           M IF+GLP+  +K YLREELARI+ SW A RFDSLPHVVHILTSKDRE ++ ILK+Q+D+
Sbjct: 1   MGIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDV 60

Query: 61  IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
           +EEVVDEVVHAYH GFNKAIQNYSQILRLFSES E I +LK DLAEAK+ LG RNKQLHQ
Sbjct: 61  VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQ 120

Query: 121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
           LWYRSVTLRHIISLLDQIEGIAKVP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVG
Sbjct: 121 LWYRSVTLRHIISLLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG 180

Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
           ALQDVRSELTKLRG LF+K+L+DLHAHLYNRGEYSS   S++E DDEVPTT AVA +  +
Sbjct: 181 ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS 240

Query: 241 SQPLSRRTR-LKGDNQFGVHGLADGSH-------SSTFDGHDEDGSLEAHDETSLDGLSI 292
           SQPLSRRTR LKGD+QFGV GL +GS+       SS+FDGHDE+ S+E HDE++ D    
Sbjct: 241 SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARN 299

Query: 293 G------------WLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIIC 340
           G            WL++STPDEF+EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIIC
Sbjct: 300 GTDSKLLSHQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIIC 359

Query: 341 QRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNG 400
           Q+LRPTIHEII SKIKAH +  N S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNG
Sbjct: 360 QKLRPTIHEIIISKIKAHLETTNLSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNG 419

Query: 401 ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHD 460
           IS SGT LAVSPVS LMAP GKAQAAAKELLDSILD++V+IFENHVV+GELLE ++S+HD
Sbjct: 420 ISNSGTHLAVSPVSPLMAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHD 479

Query: 461 INTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAV 519
           INTP+S+  D NWN +SEAS  TGGY+I F +TVLQSECQQLICEILRATPEAASADAA 
Sbjct: 480 INTPRSLPTDVNWNTESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAAA 539

Query: 520 QTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYG 579
           QTA+LA KAP K+KRD  EDGLTF FRFTDAT+SI NQGADLIRQGW +R  N   EGYG
Sbjct: 540 QTAKLAKKAPKKDKRDAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYG 599

Query: 580 TAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQL 617
           +AAVLPEQGIYLAASIYRPVLQFTDK+ SMLP+K+SQL
Sbjct: 600 SAAVLPEQGIYLAASIYRPVLQFTDKITSMLPKKHSQL 637

Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q96A65\|EXOC4_HUMAN Exocyst complex component 4 OS=Homo sapiens GN=EXOC4 PE=1 SV=1	Back alignment and function description

>sp\|O35382\|EXOC4_MOUSE Exocyst complex component 4 OS=Mus musculus GN=Exoc4 PE=1 SV=2	Back alignment and function description

>sp\|Q62824\|EXOC4_RAT Exocyst complex component 4 OS=Rattus norvegicus GN=Exoc4 PE=1 SV=1	Back alignment and function description

>sp\|Q9HE88\|SEC8_NEUCR Probable exocyst complex component sec8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sec-8 PE=3 SV=1	Back alignment and function description

>sp\|Q54P76\|EXOC4_DICDI Exocyst complex component 4 OS=Dictyostelium discoideum GN=exoc4 PE=3 SV=1	Back alignment and function description

>sp\|Q9VNH6\|EXOC4_DROME Exocyst complex component 4 OS=Drosophila melanogaster GN=sec8 PE=1 SV=3	Back alignment and function description

>sp\|P32855\|SEC8_YEAST Exocyst complex component SEC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC8 PE=1 SV=1	Back alignment and function description

>sp\|Q9XWS2\|EXOC4_CAEEL Exocyst complex component 4 OS=Caenorhabditis elegans GN=sec-8 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		641
225448968		1076	PREDICTED: probable exocyst complex comp	0.964	0.574	0.790	0.0
296085980		1084	unnamed protein product [Vitis vinifera]	0.964	0.570	0.790	0.0
356533947		1066	PREDICTED: probable exocyst complex comp	0.954	0.574	0.779	0.0
356574621		1065	PREDICTED: probable exocyst complex comp	0.953	0.573	0.773	0.0
255550688		646	exocyst componenet sec8, putative [Ricin	0.957	0.950	0.781	0.0
224113089		1084	predicted protein [Populus trichocarpa]	0.942	0.557	0.764	0.0
224097788		1087	predicted protein [Populus trichocarpa]	0.950	0.560	0.766	0.0
449490429		1073	PREDICTED: probable exocyst complex comp	0.971	0.580	0.721	0.0
449444630		1073	PREDICTED: probable exocyst complex comp	0.971	0.580	0.721	0.0
297833818		1053	hypothetical protein ARALYDRAFT_897214 [	0.960	0.584	0.730	0.0

>gi\|225448968\|ref\|XP_002269663.1\| PREDICTED: probable exocyst complex component 4-like isoform 1 [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1050 bits (2715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/648 (79%), Positives = 567/648 (87%), Gaps = 30/648 (4%)

Query: 1   MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
           M  FDGLPISPEK+YLRE+L+RI+ SW A RFDSLPHVVHILTSKDREGE Q LK+Q+DI
Sbjct: 1   MGTFDGLPISPEKSYLREDLSRIDESWAAARFDSLPHVVHILTSKDREGEAQFLKEQSDI 60

Query: 61  IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
           IEEVVDEVVHAYH+GFNKAIQNYSQILRLFSESA SI  LKVDLA+AK+ LG RNKQLHQ
Sbjct: 61  IEEVVDEVVHAYHSGFNKAIQNYSQILRLFSESAASISVLKVDLADAKKLLGARNKQLHQ 120

Query: 121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
           LWYRSVTLRHII+LLDQ+EGIAKVPARIEKLIA KQ+YAAVQLHAQS LMLEREGLQTVG
Sbjct: 121 LWYRSVTLRHIIALLDQVEGIAKVPARIEKLIAEKQFYAAVQLHAQSTLMLEREGLQTVG 180

Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
           ALQDVRSELTKLRG++FYK+LEDLHAHLYN+GEYSSA  S+HE DDEVPTT AVA++ N+
Sbjct: 181 ALQDVRSELTKLRGIIFYKILEDLHAHLYNKGEYSSAASSIHERDDEVPTTTAVAFSMNS 240

Query: 241 SQPLSRRTR-LKGDNQFGVHGLADGSH------SSTFDGHDEDGSLEAHDETSLDGLSI- 292
           SQPLSRRTR LKGDNQFGV GL DG         S+FDGHDE+G+LE HDE +LDG +  
Sbjct: 241 SQPLSRRTRLLKGDNQFGVLGLGDGYRPGSIDGGSSFDGHDEEGALELHDEATLDGYNAI 300

Query: 293 ---------------------GWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGK 331
                                 WL+ +TPDEF+E+++KSDAPLHVKYLQTMVECLC+LGK
Sbjct: 301 TKVNGGDGSQKDIKIVSHQIPPWLSYATPDEFLESMKKSDAPLHVKYLQTMVECLCMLGK 360

Query: 332 VAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQ 391
           VAAAGA+ICQRLRPTIHEIITSKIKAHA+L+NS+RS I +AA T TTGLH++KGQL SYQ
Sbjct: 361 VAAAGAMICQRLRPTIHEIITSKIKAHAELVNSTRSGICRAAHTATTGLHYLKGQLESYQ 420

Query: 392 LPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGEL 451
            PKQKRQNGISL+GTLLAVSPVS +MAP G AQ AAKELLDSILD VVRIFENHVVVGEL
Sbjct: 421 SPKQKRQNGISLAGTLLAVSPVSPVMAPAGTAQTAAKELLDSILDIVVRIFENHVVVGEL 480

Query: 452 LESRSSRHDINTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATP 510
           LES+ ++ D+NTPKS+  + NWN DSEAS VTGGYSIGFS+TVLQSECQQLICEILRATP
Sbjct: 481 LESKGTQVDMNTPKSVTVEVNWNHDSEASQVTGGYSIGFSLTVLQSECQQLICEILRATP 540

Query: 511 EAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRG 570
           EAASADA VQTARLASKAPSKEKRD SEDGLTFAFRFTDATIS+PNQG DLIRQGW+RRG
Sbjct: 541 EAASADATVQTARLASKAPSKEKRDRSEDGLTFAFRFTDATISVPNQGVDLIRQGWTRRG 600

Query: 571 TNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLG 618
            NVLQEGYG+AA+LPEQGIYLAASIYRPV+QFTDK+ASMLP+KYSQLG
Sbjct: 601 PNVLQEGYGSAAILPEQGIYLAASIYRPVIQFTDKIASMLPKKYSQLG 648

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|296085980\|emb\|CBI31421.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356533947\|ref\|XP_003535519.1\| PREDICTED: probable exocyst complex component 4-like [Glycine max]	Back alignment and taxonomy information

>gi\|356574621\|ref\|XP_003555444.1\| PREDICTED: probable exocyst complex component 4-like [Glycine max]	Back alignment and taxonomy information

>gi\|255550688\|ref\|XP_002516393.1\| exocyst componenet sec8, putative [Ricinus communis] gi\|223544491\|gb\|EEF46010.1\| exocyst componenet sec8, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224113089\|ref\|XP_002316388.1\| predicted protein [Populus trichocarpa] gi\|222865428\|gb\|EEF02559.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224097788\|ref\|XP_002311074.1\| predicted protein [Populus trichocarpa] gi\|222850894\|gb\|EEE88441.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449490429\|ref\|XP_004158603.1\| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449444630\|ref\|XP_004140077.1\| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297833818\|ref\|XP_002884791.1\| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] gi\|297330631\|gb\|EFH61050.1\| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		641
TAIR\|locus:2076249		1053	SEC8 "subunit of exocyst compl	0.561	0.341	0.697	2.8e-244
UNIPROTKB\|D4A9S7		404	Exoc4 "Exocyst complex compone	0.255	0.405	0.309	5.3e-15
UNIPROTKB\|F1SNF7		387	LOC100511293 "Uncharacterized	0.404	0.669	0.269	6.9e-15
UNIPROTKB\|E9PED2		473	EXOC4 "Exocyst complex compone	0.330	0.448	0.288	8.1e-15
UNIPROTKB\|Q96A65		974	EXOC4 "Exocyst complex compone	0.330	0.217	0.288	3.1e-14
UNIPROTKB\|A6QLD1		975	EXOC4 "EXOC4 protein" [Bos tau	0.400	0.263	0.271	1.1e-13
UNIPROTKB\|F1PMM8		975	EXOC4 "Uncharacterized protein	0.402	0.264	0.264	1.8e-13
RGD\|621791		975	Exoc4 "exocyst complex compone	0.255	0.168	0.309	1.8e-13
UNIPROTKB\|Q62824		975	Exoc4 "Exocyst complex compone	0.255	0.168	0.309	1.8e-13
UNIPROTKB\|E1BUN2		976	EXOC4 "Uncharacterized protein	0.400	0.263	0.269	2.3e-13

TAIR\|locus:2076249 SEC8 "subunit of exocyst complex 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1312 (466.9 bits), Expect = 2.8e-244, Sum P(2) = 2.8e-244
 Identities = 261/374 (69%), Positives = 303/374 (81%)

Query:   257 GVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIG------------WLANSTPDEFV 304
             G +  A    SS+FDGHDE+ S+E HDE++ D    G            WL++STPDEF+
Sbjct:   265 GSYRTASNDESSSFDGHDEEDSVE-HDESTADTARNGTDSKLLSHQLPPWLSDSTPDEFI 323

Query:   305 EAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS 364
             EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIICQ+LRPTIHEII SKIKAH +  N 
Sbjct:   324 EAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQKLRPTIHEIIISKIKAHLETTNL 383

Query:   365 SRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQ 424
             S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNGIS SGT LAVSPVS LMAP GKAQ
Sbjct:   384 SKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNGISNSGTHLAVSPVSPLMAPGGKAQ 443

Query:   425 AAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEAS-VTG 483
             AAAKELLDSILD++V+IFENHVV+GELLE ++S+HDINTP+S+  D NWN +SEAS  TG
Sbjct:   444 AAAKELLDSILDTIVKIFENHVVIGELLEMKASQHDINTPRSLPTDVNWNTESEASQATG 503

Query:   484 GYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTF 543
             GY+I F +TVLQSECQQLICEILRATPEAASADAA QTA+LA KAP K+KRD  EDGLTF
Sbjct:   504 GYTISFPLTVLQSECQQLICEILRATPEAASADAAAQTAKLAKKAPKKDKRDAPEDGLTF 563

Query:   544 AFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFT 603
              FRFTDAT+SI NQGADLIRQGW +R  N   EGYG+AAVLPEQGIYLAASIYRPVLQFT
Sbjct:   564 TFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYGSAAVLPEQGIYLAASIYRPVLQFT 623

Query:   604 DKVASMLPQKYSQL 617
             DK+ SMLP+K+SQL
Sbjct:   624 DKITSMLPKKHSQL 637

GO:0000145 "exocyst" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009846 "pollen germination" evidence=IGI

GO:0009860 "pollen tube growth" evidence=IGI

GO:0005829 "cytosol" evidence=IDA

GO:0048354 "mucilage biosynthetic process involved in seed coat development" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

UNIPROTKB\|D4A9S7 Exoc4 "Exocyst complex component 4" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SNF7 LOC100511293 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PED2 EXOC4 "Exocyst complex component 4" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q96A65 EXOC4 "Exocyst complex component 4" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|A6QLD1 EXOC4 "EXOC4 protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PMM8 EXOC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

RGD\|621791 Exoc4 "exocyst complex component 4" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q62824 Exoc4 "Exocyst complex component 4" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BUN2 EXOC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93YU5	EXOC4_ARATH	No assigned EC number	0.7335	0.9609	0.5849	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		641
pfam04048		142	pfam04048, Sec8_exocyst, Sec8 exocyst complex comp	1e-43

>gnl\|CDD\|202865 pfam04048, Sec8_exocyst, Sec8 exocyst complex component specific domain	Back alignment and domain information

 Score =  152 bits (387), Expect = 1e-43
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 15  YLREELARIEVSWVAPRFDSLPHVVHILTSKDREG-----EVQILKDQNDIIEEVVDEVV 69
            L+E L  I+  W     D    V   L   D             +     IE+ + EVV
Sbjct: 1   KLKEVLNTIKYEWPQVLSDDANPVELALQLLDDTSVGLAHRYPEFEQLKKRIEQALQEVV 60

Query: 70  HAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLR 129
           + +H GFN +I +Y +IL   + S E I++LK  L EAK+ LGTR  +L +L  RS   +
Sbjct: 61  NEHHQGFNSSIGSYHKILSSITSSQERIRQLKESLEEAKKLLGTRKPELKELNQRSQKYK 120

Query: 130 HIISLLDQIEGIAKVPARIEKL 151
            +I LLD IE + KVP ++E+L
Sbjct: 121 EMIELLDAIEELRKVPDKLEQL 142

Length = 142

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		641
KOG3691		982	consensus Exocyst complex subunit Sec8 [Intracellu	100.0
PF04048		142	Sec8_exocyst: Sec8 exocyst complex component speci	99.98
PF10475		291	DUF2450: Protein of unknown function N-terminal do	99.71
KOG2115		951	consensus Vacuolar sorting protein VPS45 [Intracel	99.27
PF06248		593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	98.2
PF15469		182	Sec5: Exocyst complex component Sec5	98.13
PF04100		383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	98.02
PF04124		338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	97.85
KOG2176		800	consensus Exocyst complex, subunit SEC15 [Intracel	97.43
PF06148		133	COG2: COG (conserved oligomeric Golgi) complex com	97.17
PF10392		132	COG5: Golgi transport complex subunit 5; InterPro:	97.13
KOG2180		793	consensus Late Golgi protein sorting complex, subu	96.79
KOG2069		581	consensus Golgi transport complex subunit [Intrace	96.4
KOG2346		636	consensus Uncharacterized conserved protein [Funct	95.88
PF08700		87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	94.88
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	93.99
KOG2307		705	consensus Low density lipoprotein receptor [Intrac	92.28
KOG0412		773	consensus Golgi transport complex COD1 protein [In	90.49
PF09763		701	Sec3_C: Exocyst complex component Sec3; InterPro:	90.03
KOG1961		683	consensus Vacuolar sorting protein VPS52/suppresso	87.84
PRK11637		428	AmiB activator; Provisional	82.01
PF02601		319	Exonuc_VII_L: Exonuclease VII, large subunit; Inte	80.36

>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=8e-47  Score=423.44  Aligned_cols=462  Identities=21%  Similarity=0.253  Sum_probs=330.6

Q ss_pred             HHHHHHHhHhhhCCCCCCchhHHHhhcC--CCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHH
Q 006551           16 LREELARIEVSWVAPRFDSLPHVVHILT--SKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSES   93 (641)
Q Consensus        16 l~evL~~I~~eW~~~~Fd~l~~vL~lLs--s~~rE~e~~~Le~~~~~l~~~L~~vV~eH~q~FN~sI~sYs~I~~~IseS   93 (641)
                      ..+...+|...|.           ...+  -.+||.++++|++.++..+.+|+++|++|+|+|++.|.+|++|++.|+.|
T Consensus        26 sn~~G~lInvi~n-----------L~~Se~~e~re~ek~~Led~Yk~~~a~Lq~lv~~H~q~~t~~i~sy~~i~s~It~~   94 (982)
T KOG3691|consen   26 SNELGLLINVIRN-----------LVGSEDTEPRETEKERLEDSYKEFGAALQELVHTHKQDFTTGISSYGEISSGITNC   94 (982)
T ss_pred             ccccchhhhHHHh-----------hccCCcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4455666776666           3333  23899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHhhhHHHHHHHHHHHHHHhcchHHHHHHHhccCHHHHHHHHHHHHHHHhc
Q 006551           94 AESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLER  173 (641)
Q Consensus        94 qe~I~~lK~~L~~aK~~L~~rr~eLk~Lw~~s~~~k~mL~iLd~IE~Lk~vP~kIE~lIseK~Yl~Av~LL~~s~~ll~~  173 (641)
                      |++|.+||++|.+||++|+|+|++|++||.++.+|++||++|++||+++++|++||.+|++|+|++|.++|.+++.++++
T Consensus        95 rerI~~vK~~L~~~k~ll~~~rdeLqklw~~~~q~K~Vi~vL~eieEl~qvPqkie~~i~keqY~~Asdll~~~~~~lng  174 (982)
T KOG3691|consen   95 RERIHNVKNNLEACKELLNTRRDELQKLWAENSQYKKVIEVLKEIEELRQVPQKIETLIAKEQYLQASDLLTRAWELLNG  174 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCchHHHHHHHHHhHHHHHHHHHHHHHHhHhcCCCccc-ccccccccCCCCccchhcccccCCCCCccccccccC
Q 006551          174 EGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSS-AVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKG  252 (641)
Q Consensus       174 ~eL~~I~AL~dLRs~L~~qe~~L~d~LvEELh~hLYlKs~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~q~ls~~trl~~  252 (641)
                      + |.+|..|+|||++|+.+++.|+++|+||||+|+|+|+.... .+  .+.                 ..|++.+  +. 
T Consensus       175 ~-L~~VEgLs~l~~ele~~~~~L~~~L~eELv~ily~ks~~~~l~~--~~~-----------------~~~~~s~--l~-  231 (982)
T KOG3691|consen  175 P-LDGVEGLSDLRSELEGLLSHLEDILIEELVSILYLKSVAYPLVS--YCR-----------------TNPLSSR--LN-  231 (982)
T ss_pred             c-chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhHHh--hhc-----------------CCchhhH--HH-
Confidence            6 99999999999999999999999999999999999975321 11  011                 1122111  11 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCccccccccccccccccc-----cCC----Cch--HHHHHhhcC-CcchhHHHHH
Q 006551          253 DNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWL-----ANS----TPD--EFVEAIRKS-DAPLHVKYLQ  320 (641)
Q Consensus       253 ~nq~~~~~~~~~s~~~~~~~~~~~~n~~~~di~~~s~~i~~fl-----sn~----~p~--~f~ed~~kn-~~~dsf~Yi~  320 (641)
                                      +|.     ||.++.+...+++.+.+-+     .+.    +.+  ...+++.-. |++.+-.+..
T Consensus       232 ----------------~~~-----~~~in~t~l~~sr~~~ea~~~k~~~g~~sv~~~~~~~~~~~l~~~~pe~~sslf~~  290 (982)
T KOG3691|consen  232 ----------------DFL-----YNNINTTTLGTSRQLLEALCHKSDAGSGSVRDIRIVLEKEDLLLSLPEANSSLFRR  290 (982)
T ss_pred             ----------------HHh-----hcccCccccCccHHHHHHHHHHhhcCCcchhhHHHHHhhccccccchhhHHHHHHH
Confidence                            111     3333333333333221110     000    000  112222223 6666667778


Q ss_pred             HHHHHHHhhCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhchhccccccccCccccccccCcccccccccccccCC
Q 006551          321 TMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNG  400 (641)
Q Consensus       321 ~LlEsLn~LgKL~~Aldil~qRl~~ELh~IV~~ti~e~~~~~~~s~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~s~~~  400 (641)
                      .+++.++++.|+|.++.+|..|+.+|++++|.+++..+..           .++                +..+..+   
T Consensus       291 il~k~~~~~~k~p~~~n~i~~~~~~el~niv~kSt~~i~~-----------~g~----------------~~~e~at---  340 (982)
T KOG3691|consen  291 ILEKFTTVDSKSPAIVNKISERINVELVNIVSKSTYDISL-----------SGE----------------TDREHAT---  340 (982)
T ss_pred             HHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhhccchhhhc-----------ccc----------------chhhhhh---
Confidence            9999999999999999999999999999999766555411           111                0000010   


Q ss_pred             cccccccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhhhHHHHH------HHHHhhcCCCCCCCcccccCCCCC
Q 006551          401 ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGE------LLESRSSRHDINTPKSMIADANWN  474 (641)
Q Consensus       401 ~~~~~t~~~~~~~~~~~~~~~~~~~il~elf~slf~k~~avle~Hrvv~e------v~~~i~~r~~~~~~~~~~~~~~~~  474 (641)
                             |            +..--+|.++||-||.||.++.+.|+++.+      +++...++.               
T Consensus       341 -------~------------~tn~f~L~ell~~if~kf~a~aq~Ha~~~~~s~~~~vv~P~~sq~---------------  386 (982)
T KOG3691|consen  341 -------F------------DTNHFMLLELLEEIFTKFEAAAQKHASSLHKSLQNDVVSPKVSQK---------------  386 (982)
T ss_pred             -------c------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcccCC---------------
Confidence                   1            122239999999999999999999999988      333333332               


Q ss_pred             CCCCccccccccchhhhHHHHHHHHHHHHHHhhcCccch-hhhHHHHH----------HHhhcCCCCccccCCCCCCcce
Q 006551          475 PDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAA-SADAAVQT----------ARLASKAPSKEKRDGSEDGLTF  543 (641)
Q Consensus       475 ~d~~~s~~~~~~~l~~w~~~QsE~~~Ll~~yl~~~~e~~-~~~~~~~~----------~~~~~~~~~~~~~~~s~~g~~~  543 (641)
                              ..|++-.+|..+|+|++-||.+||-..+--- ...-+++.          ++.+.     +..-++..|+ |
T Consensus       387 --------d~f~~~~~W~k~qs~ielllsE~i~~nn~~~~~~e~s~~~sp~s~~r~~~~~f~~-----e~~~~~~s~~-f  452 (982)
T KOG3691|consen  387 --------DTFDFTDFWQKAQSEIELLLSEYIDNNNNSVKGTEMSINNSPASNERKKLFDFTN-----EIAVEPNSNL-F  452 (982)
T ss_pred             --------CcccHHHHHHHHHHHHHHHHHHHhccCCCccccccccccCCCCCcchhHHHHhhc-----cccCCCCccc-c
Confidence                    2478888899999999999999996433210 01111111          12221     2223445555 6


Q ss_pred             eeeecccccccCCCCccccccccccCCCcccccCcccc------cccCCCcceehhhhhhhhhhhHHHHhhcccccccc
Q 006551          544 AFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTA------AVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQ  616 (641)
Q Consensus       544 ~f~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~rp~~~f~~~~~~~~~~~~~~  616 (641)
                      -+||.--+++-..   .   .+-+|+..-|+---|-+|      .-+=-+|.|-+..||-|.+-|+.-..+.+|-+-.|
T Consensus       453 ~~~~~~~a~~k~~---~---l~~qrs~~~~~~~el~~g~s~e~~e~ic~Psvfni~vI~~pll~fie~te~~l~~~p~q  525 (982)
T KOG3691|consen  453 YHRINELANEKAP---E---LILQRSNASVSTIELFSGSSKEIVELICKPSVFNIKVILPPLLRFIEETESILKNPPIQ  525 (982)
T ss_pred             hhHHHHHhhhccc---h---hhhhhhhhhhccchhccCcchhhhcccCCcccceeeehhhHHHHHHHHHHHHcCCCCCC
Confidence            7776665555332   1   223344333321111111      11556889999999999999999999988866543

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells	Back alignment and domain information

>PF15469 Sec5: Exocyst complex component Sec5	Back alignment and domain information

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []	Back alignment and domain information

>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex	Back alignment and domain information

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2346 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8	Back alignment and domain information

>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		641
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 57.2 bits (137), Expect = 2e-08
 Identities = 77/595 (12%), Positives = 180/595 (30%), Gaps = 146/595 (24%)

Query: 3   IFDGLPISPEKAYLR--EELARIEVSWVAPRFD------SLPHVVHILTSKDR-EGEVQI 53
           +F  L    E+   +  EE+ RI   ++           S+   ++I   +DR   + Q+
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI-EQRDRLYNDNQV 125

Query: 54  LKDQNDIIEEVVDE--------------VVHAYHTGFNKAIQNYSQILRLFSESAESIKE 99
               N    +   +              ++     G  K        +     + +    
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV-LGSGK------TWV-----ALDVCLS 173

Query: 100 LKVDLAEAKR----RLGTRNK---QLHQLWYRSVTLRHII--SLLDQIEGIAKVPARIEK 150
            KV      +     L   N     L  L      L + I  +   + +  + +  RI  
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQ----KLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 151 LIAGKQYYAAVQLHAQSALMLEREGLQTVGALQ--DVRSEL---TKLRGVL--------F 197
           + A  +     + +    L+L    +Q   A    ++  ++   T+ + V          
Sbjct: 230 IQAELRRLLKSKPYENCLLVL--LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287

Query: 198 YKVLEDLHAHLYNRGEYSSAVLS--MHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQ 255
           +  L+     L    +   ++L   +     ++P       TTN   P            
Sbjct: 288 HISLDHHSMTLTP--DEVKSLLLKYLDCRPQDLP---REVLTTN---PRR---------- 329

Query: 256 FGVHGLADGSHSSTFDG--HDEDGSLEAHDETSLDGLSIGWLANSTPDEFVE-----AIR 308
             +   +     +T+D   H     L    E+SL+ L         P E+ +     ++ 
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE--------PAEYRKMFDRLSVF 381

Query: 309 KSDAPLHVKYLQTM------VECLCILGKVAAAGAIICQRLRPT--IHEI-------ITS 353
              A +    L  +       + + ++ K+     +  Q    T  I  I       + +
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN 441

Query: 354 KIKAHAQLINSSRSAIGQAAQTGTTGLHFMKG---QLRSYQLPKQKRQNGISL-SGTLLA 409
           +   H  +++     I +   +      ++         + L   +    ++L     L 
Sbjct: 442 EYALHRSIVDHYN--IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD 499

Query: 410 VSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIA 469
              +   +     A  A+  +L+++    ++ ++ ++            +D    + ++ 
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQ--LKFYKPYI----------CDND-PKYERLVN 546

Query: 470 D-ANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTAR 523
              ++ P  E +            ++ S+   L+   L A  EA   +A  Q  R
Sbjct: 547 AILDFLPKIEEN------------LICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		641
d2d2sa1		229	Exocyst complex component EXO84 {Baker's yeast (Sa	94.41

>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.41  E-value=0.14  Score=26.59  Aligned_cols=69  Identities=13%  Similarity=0.111  Sum_probs=49.3

Q ss_pred             HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9788876006999999942699999999999999970219----88777607899999996979999999999
Q 006551          136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREG----LQTVGALQDVRSELTKLRGVLFYKVLEDL  204 (641)
Q Consensus       136 d~IE~Lk~vP~kIE~lIseK~Yl~Av~LL~~s~~lL~~~e----L~~I~AL~dLRs~L~~qe~~L~d~LIEEL  204 (641)
                      ..++++...|+.++..|++++|-+|++++..+-..+.+-+    ...+-.+..++..+.+.+..|.+.|..+|
T Consensus         7 ~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l   79 (229)
T d2d2sa1           7 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI   79 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6441372661888999998609999999999999997363456753278999999999999999999999998

PyMOL of d2d2sa1