Citrus Sinensis ID: 006561


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640
MKFRGFSYKKVEEKPPSPAIEAVISSNTPQNTTPRSTEPAESSQFEDSPLPPETQPWDYFGDHPIDHQFSFQEGRGMNQQYESADDLRRLREEEGIPELEDEEEKASFHEKEQQSQDLEDDFDEPAPQTLVRPFENRNRLHDHNAPSASPTMPSAESVASESELVNGGRSNSPPLSPVRATSSIAAHPTDQKETPVKEDCIENKVASKDFFSSMKDIELLFIKASDSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLTWHRTTSSRSSSSRNPLGANSKDDVEDLTGDIFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESKGVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSLPQKSSRRKRRVPAPPPLRNFGPPIYATCSVWLDLLDWLPSKELTDSIKSLASETSHFLPRQEKNQGKSGSETAVNLLADDASEDWISGFDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAKIKYDELVNREAKSSN
ccccccccEEEEccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccccccHHHHHHHHHHccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
ccccccccEEEEEcccccEEEEEEEccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccHHHHHHHccccccccccccccHHHccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
mkfrgfsykkveekppspaieavissntpqnttprstepaessqfedsplppetqpwdyfgdhpidhqfsfqegrgmnqqyesaDDLRRLReeegipeledeeekasFHEKEqqsqdleddfdepapqtlvrpfenrnrlhdhnapsasptmpsaesvaseselvnggrsnspplspvratssiaahptdqketpvkedcienkvaskdffsSMKDIELLFIKasdsgkevpRMLEAnklhfrpifeekdsdsMASTILKACfscgedppqvqeepvqtdVKYLTwhrttssrssssrnplganskddvedltgdiFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLeskgvsshkidkTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNnahskisiksdsHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCvslpqkssrrkrrvpappplrnfgppiyaTCSVWLDLldwlpskeltDSIKSLASetshflprqeknqgksgsETAVNLLAddasedwiSGFDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAKIKYDELVNREAKSSN
mkfrgfsykkveekppspaieavissntpqnttprstEPAESSQFEDSPLPPETQPWDYFGDHPIDHQFSFQEGRGMNQQYESADDLRRLREEEGIpeledeeekasFHEKEQQsqdleddfdePAPQTLVRPFENRNRLHDHnapsasptmpSAESVASESELVNggrsnspplspVRATSsiaahptdqketpvkedciENKVASKDFFSSMKDIELLFIkasdsgkevPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLTWHrttssrssssrnplganskddvEDLTGDIFDSIHMissshastldrLYAWERKLYDevkasemirreyDSKCRILRqleskgvsshkidktravvkdLHSRIKVAIHRIDSISKRieelrdkelqpQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSlpqkssrrkrrvpappplrnfgppiYATCSVWLDLLDWLPSKELTDSIKSLAsetshflprqeknqgksgSETAVNLLADDASEDWISGFDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAKIKYDELVNREAKSSN
MKFRGFSYKKVEEKPPSPAIEAVISSNTPQNTTPRSTEPAESSQFEDSPLPPETQPWDYFGDHPIDHQFSFQEGRGMNQQYESADDlrrlreeegipeledeeeKASFHEKEQQSQDLEDDFDEPAPQTLVRPFENRNRLHDHNAPSASPTMPsaesvaseseLVNGGRSNSPPLSPVRATSSIAAHPTDQKETPVKEDCIENKVASKDFFSSMKDIELLFIKASDSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLTWHrttssrssssrNPLGANSKDDVEDLTGDIFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESKGVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENElsslsssFTKWISAQKFYLQAINNWLVKCVSLPQKSSRRKRRVPAPPPLRNFGPPIYATCSVWLDLLDWLPSKELTDSIKSLASETSHFLPRQEKNQGKSGSETAVNLLADDASEDWISGFDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAKIKYDELVNREAKSSN
*********************************************************DYFG***********************************************************************************************************************************************VASKDFFSSMKDIELLFIKA***************LHFRPIF**********TILKACFSC**************DVKYLTW**************************TGDIFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLES*GV**HKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELR***LQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSL********************GPPIYATCSVWLDLLDWLPSK**********************************LLADDASEDWISGFDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAKIKYD***********
***********************************************************FGDHPIDH***********************************************************************************************************************************************FSSMKDIELLFIKASDSGKEVPRMLEANK*******************LKACFSC*****************************************************SIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQ********HKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVA*******************IHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVS**********************PPIYATCSVWLDLLDWLPSKELTDSIKSLASETSHF***********************************************************************************
MKFRGFSYKKVEEKPPSPAIEAVISS************************PPETQPWDYFGDHPIDHQFSFQEGRGMNQQYESADDLRRLREEEGIP***********************DFDEPAPQTLVRPFENRNRLHDHN************************************TSSIAAH*********KEDCIENKVASKDFFSSMKDIELLFIKASDSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGE***********TDVKYLTW********************DDVEDLTGDIFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESKGVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSLP**********PAPPPLRNFGPPIYATCSVWLDLLDWLPSKELTDSIKSLASETSHF*************ETAVNLLADDASEDWISGFDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAKIKYDELV********
******SYKKVEEKPPSPAIEAVISSNT*************************TQPWDYFGDHPIDHQFSFQEGRGMNQQYESADDLRRLREEEGIPEL***********************************************************************************************************SKDFFSSMKDIELLFIKASDSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLTWHR**********************************I*SSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESKGVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSLPQK***********P**RNFGPPIYATCSVWLDLLDWLPSKELTDSIKSLASETSHFLPRQEKNQGKSGSETAVNLLADDASEDWI**********************NSVQMYADLKKAIQDAKIKYDELVNREA****
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MKFRGFSYKKVEEKPPSPAIEAVISSNTPQNTTPRSTEPAESSQFEDSPLPPETQPWDYFGDHPIDHQFSFQEGRGMNQQYESADDLRRLREEEGIPELEDEEEKASFHEKEQQSQDLEDDFDEPAPQTLVRPFENRNRLHDHNAPSASPTMPSAESVASESELVNGGRSNSPPLSPVRATSSIAAHPTDQKETPVKEDCIENKVASKDFFSSMKDIELLFIKASDSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLTWHRTTSSRSSSSRNPLGANSKDDVEDLTGDIFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESKGVSSHKIDKTRAVVKDLHSRxxxxxxxxxxxxxxxxxxxxxELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSLPQKSSRRKRRVPAPPPLRNFGPPIYATCSVWLDLLDWLPSKELTDSIKSLASETSHFLPRQEKNQGKSGSETAVNLLADDASEDWISGFDRFRSSLVGFLGQLNNFSENSVQMxxxxxxxxxxxxxxxxxxxxxEAKSSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query640
255561286 768 conserved hypothetical protein [Ricinus 0.975 0.812 0.693 0.0
225436013 765 PREDICTED: uncharacterized protein LOC10 0.979 0.819 0.677 0.0
356549570 797 PREDICTED: uncharacterized protein LOC10 0.987 0.792 0.627 0.0
356577435 784 PREDICTED: uncharacterized protein LOC10 0.981 0.801 0.617 0.0
356554313 783 PREDICTED: uncharacterized protein LOC77 0.985 0.805 0.607 0.0
356499269 783 PREDICTED: uncharacterized protein LOC10 0.965 0.789 0.618 0.0
224132298719 predicted protein [Populus trichocarpa] 0.903 0.803 0.6 0.0
449516888 777 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.975 0.803 0.579 0.0
449463871 777 PREDICTED: uncharacterized protein LOC10 0.975 0.803 0.579 0.0
297825989 744 hypothetical protein ARALYDRAFT_481592 [ 0.948 0.815 0.582 0.0
>gi|255561286|ref|XP_002521654.1| conserved hypothetical protein [Ricinus communis] gi|223539166|gb|EEF40761.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/637 (69%), Positives = 510/637 (80%), Gaps = 13/637 (2%)

Query: 1   MKFRGFSYKKVEEKPPSPAIEAVISSNTPQNTTPRSTEPAESSQFEDSPLPPETQPWDYF 60
           MKFRGFS +KVEEKPP      V SS+TPQ TTPRSTE  E+S  E S +PP T PWD+F
Sbjct: 121 MKFRGFSSRKVEEKPPIVVTGTVTSSSTPQTTTPRSTEKPETSPVEGSSVPPGTPPWDFF 180

Query: 61  G-DHPIDHQFSFQEGRGMNQQYESADDLRRLREEEGIPELEDEEEKASFHEKEQQSQDLE 119
           G  HPIDHQFS QEG+ M    ++ DDLRRLREEEGIPELEDEEEK S H  E  S+D  
Sbjct: 181 GLFHPIDHQFSMQEGKEMKPGLDNVDDLRRLREEEGIPELEDEEEKHSSHASED-SEDSV 239

Query: 120 DDFDEPAPQTLVRPFENRNRLHDHNAPSASPTMPSAESVASESELVNGGRSNSPPLSPVR 179
           D+FD+P   TLVR FEN NR+ DH A S SP +PSAESVASE+EL+NG +SNSP +SP+R
Sbjct: 240 DEFDDPPADTLVRSFENLNRVQDHVAASVSPAVPSAESVASETELLNGEKSNSPDMSPLR 299

Query: 180 ATSSIAAHPTDQKETPVKEDCIENKVASKDFFSSMKDIELLFIKASDSGKEVPRMLEANK 239
             +S  A  +D K+TPVK D   NK++ KDFFSS+KDIE LFIKAS +GKEVPRMLEANK
Sbjct: 300 TPTSTVAVSSDAKKTPVKADRTANKISPKDFFSSIKDIEYLFIKASGAGKEVPRMLEANK 359

Query: 240 LHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLTWHRTTSSRSSSSRN 299
           LHFRPI   K++ S+ S   KACFSCGEDP QVQEEP Q  VKYLTWHRTTSSRSSSSRN
Sbjct: 360 LHFRPIVPGKENGSVVSIFFKACFSCGEDPSQVQEEPAQNSVKYLTWHRTTSSRSSSSRN 419

Query: 300 PLGANSKDDVEDLTGDIFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKC 359
           PLG+N+ DD  DLTGDIF+S  MIS SHASTLDRLYAWERKLYDEVK SE++R+EYDSK 
Sbjct: 420 PLGSNANDDTGDLTGDIFESFCMISGSHASTLDRLYAWERKLYDEVKTSEIVRKEYDSKR 479

Query: 360 RILRQLESKGVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLI 419
            ILRQLESKG  S KIDKTRAVVKDLHSRI+VAIHRIDSISKRIEELRDKELQPQLE+LI
Sbjct: 480 AILRQLESKGEHSSKIDKTRAVVKDLHSRIRVAIHRIDSISKRIEELRDKELQPQLEELI 539

Query: 420 EGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLENELSSLSSSFTKW 479
           +GLSRMWEVMFECH+LQF +IS+AYN+  +KISI+SDSHR+I IHLENEL SLSS FTKW
Sbjct: 540 DGLSRMWEVMFECHRLQFHIISIAYNSRSAKISIQSDSHREIAIHLENELYSLSSCFTKW 599

Query: 480 ISAQKFYLQAINNWLVKCVSLPQKSSRRKRRVPAPP-PLRNFGPPIYATCSVWLDLLDWL 538
           I AQK YLQAIN+WL KCV  PQK++++KR+  +P   LR  GPPIY TC VWL+ L  L
Sbjct: 600 IGAQKSYLQAINDWLFKCVFFPQKTTKKKRKQTSPSLTLRRNGPPIYVTCGVWLEKLKAL 659

Query: 539 PSKELTDSIKSLASETSHFLPRQEKNQGKS----------GSETAVNLLADDASEDWISG 588
           P+K++ ++IK LA+ET+H LP QEKNQGKS          GS++ +N+L D+AS+D ISG
Sbjct: 660 PAKDVVEAIKGLAAETAHLLPHQEKNQGKSANPASWKAENGSDSGINMLRDEASDDCISG 719

Query: 589 FDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAK 625
           FDRFRSSL GFLGQLNNFSE SV MYA+L+KAI+DAK
Sbjct: 720 FDRFRSSLEGFLGQLNNFSEGSVTMYAELQKAIRDAK 756




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436013|ref|XP_002273628.1| PREDICTED: uncharacterized protein LOC100264970 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356549570|ref|XP_003543165.1| PREDICTED: uncharacterized protein LOC100779418 [Glycine max] Back     alignment and taxonomy information
>gi|356577435|ref|XP_003556831.1| PREDICTED: uncharacterized protein LOC100800818 [Glycine max] Back     alignment and taxonomy information
>gi|356554313|ref|XP_003545492.1| PREDICTED: uncharacterized protein LOC778156 [Glycine max] Back     alignment and taxonomy information
>gi|356499269|ref|XP_003518464.1| PREDICTED: uncharacterized protein LOC100809444 [Glycine max] Back     alignment and taxonomy information
>gi|224132298|ref|XP_002328234.1| predicted protein [Populus trichocarpa] gi|222837749|gb|EEE76114.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449516888|ref|XP_004165478.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101220706 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449463871|ref|XP_004149654.1| PREDICTED: uncharacterized protein LOC101220706 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297825989|ref|XP_002880877.1| hypothetical protein ARALYDRAFT_481592 [Arabidopsis lyrata subsp. lyrata] gi|297326716|gb|EFH57136.1| hypothetical protein ARALYDRAFT_481592 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query640
TAIR|locus:2059284743 AT2G27090 [Arabidopsis thalian 0.807 0.695 0.575 1.1e-161
TAIR|locus:2135292657 AT4G39790 "AT4G39790" [Arabido 0.553 0.538 0.453 2e-85
TAIR|locus:2126510725 AT4G30130 "AT4G30130" [Arabido 0.365 0.322 0.407 7.4e-51
TAIR|locus:2059057814 AT2G19090 "AT2G19090" [Arabido 0.421 0.331 0.379 1.2e-50
TAIR|locus:2036900953 AT1G21740 [Arabidopsis thalian 0.473 0.317 0.324 1.8e-48
TAIR|locus:2204740879 AT1G77500 [Arabidopsis thalian 0.417 0.303 0.358 1.5e-47
TAIR|locus:2827650733 AT2G17110 [Arabidopsis thalian 0.373 0.326 0.360 2.9e-42
TAIR|locus:2030382614 AT1G20530 "AT1G20530" [Arabido 0.454 0.473 0.308 1.5e-39
TAIR|locus:2179504775 AT5G25590 [Arabidopsis thalian 0.392 0.323 0.345 1.1e-32
TAIR|locus:2018174798 AT1G52320 "AT1G52320" [Arabido 0.367 0.294 0.329 7.9e-32
TAIR|locus:2059284 AT2G27090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1556 (552.8 bits), Expect = 1.1e-161, Sum P(2) = 1.1e-161
 Identities = 311/540 (57%), Positives = 391/540 (72%)

Query:   107 SFHEKEQQSQDLEDDFDEPAPQTLVRPFENRNRLH-DHNAPSASPTMPXXXXXXXXXXLV 165
             SF E+E+     +D+FDEP   TLVR FEN NR+  DH+      T+P            
Sbjct:   217 SFQEREESRDSDDDEFDEPTSDTLVRSFENFNRVRRDHS------TLPQREGVESDSS-- 268

Query:   166 NGGRSNSPPLSPVRATSSIAAHPTDQKETPVKEDCIENKVASKDFFSSMKDIELLFIKAS 225
             +  +S +P LSP    + + A P ++  TP K D  ENK+  +DF SSMK+IELLF+KAS
Sbjct:   269 DAEKSKTPELSP--PVTPLVATPVNK--TPNKGDHTENKLPPRDFLSSMKEIELLFVKAS 324

Query:   226 DSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLT 285
             ++GKEVPRMLEANKLHFRPI   K+S S AS++ K C SCGEDP  V EEP Q  VKYLT
Sbjct:   325 ETGKEVPRMLEANKLHFRPIVPSKESGSGASSLFKTCLSCGEDPKDVPEEPAQNSVKYLT 384

Query:   286 WHXXXXXXXXXXXNPLGANSKDDVEDLTGDIFDSIHMISSSHASTLDRLYAWERKLYDEV 345
             WH           NPLG  + DDVE+L  ++F++I MI+ SHASTLDRLYAWERKLYDEV
Sbjct:   385 WHRTESSRSSSSRNPLGGMNSDDVEELNSNLFENICMIAGSHASTLDRLYAWERKLYDEV 444

Query:   346 KASEMIRREYDSKCRILRQLESKGVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEE 405
             K S+ +RREYD KCRILR+LES+G  S +IDKTRAVVKDLHSRI+VAIHRIDSIS+RIEE
Sbjct:   445 KGSQTVRREYDEKCRILRELESEGKGSQRIDKTRAVVKDLHSRIRVAIHRIDSISRRIEE 504

Query:   406 LRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHL 465
             LRD ELQPQLE+LIEGLSRMWEVM ECHK+QFQ+I   Y   + K++++S+ HRQ+T HL
Sbjct:   505 LRDNELQPQLEELIEGLSRMWEVMLECHKVQFQLIKACYRGGNIKLNMQSELHRQVTSHL 564

Query:   466 ENEXXXXXXXFTKWISAQKFYLQAINNWLVKCVSLPQKSSRRKRRVPAPPPLRNFGPPIY 525
             E+E       FTKWI+ QK Y+QAIN WLVKCV+LPQ+S +RKRR P P  LRN+GPPIY
Sbjct:   565 EDELCALASSFTKWITGQKSYIQAINEWLVKCVALPQRS-KRKRRAPQPS-LRNYGPPIY 622

Query:   526 ATCSVWLDLLDWLPSKELTDSIKSLASETSHFLPRQEKNQGK---SG---SETAVNLLAD 579
             ATC +WL+ L+ LP+KE++ SIK+LAS+ + FLPRQEKN+ K   SG   ++   ++L D
Sbjct:   623 ATCGIWLEKLEVLPTKEVSGSIKALASDVARFLPRQEKNRTKKHRSGENKNDLTAHMLQD 682

Query:   580 DASEDWISGFDRFRSSLVGFLGQLNNFSENSVQMYADLKKAIQDAKIKYDELVNREAKSS 639
             +  ED   GFDRFR+SL GF+GQLN F+E+SV+MY +LK+ I  AK  Y++L  ++A SS
Sbjct:   683 ETLEDCGPGFDRFRTSLEGFVGQLNQFAESSVKMYEELKEGIHGAKNNYEQL--KKAYSS 740


GO:0005634 "nucleus" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0006486 "protein glycosylation" evidence=RCA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
GO:0016558 "protein import into peroxisome matrix" evidence=RCA
TAIR|locus:2135292 AT4G39790 "AT4G39790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126510 AT4G30130 "AT4G30130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059057 AT2G19090 "AT2G19090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036900 AT1G21740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204740 AT1G77500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827650 AT2G17110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030382 AT1G20530 "AT1G20530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179504 AT5G25590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018174 AT1G52320 "AT1G52320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00017371001
SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (765 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query640
pfam04782309 pfam04782, DUF632, Protein of unknown function (DU 1e-113
>gnl|CDD|218262 pfam04782, DUF632, Protein of unknown function (DUF632) Back     alignment and domain information
 Score =  341 bits (876), Expect = e-113
 Identities = 143/349 (40%), Positives = 199/349 (57%), Gaps = 42/349 (12%)

Query: 209 DFFSSMKDIELLFIKASDSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGED 268
           D    +K+IE  F+KA++SGKEV ++LEA K+ +   F                      
Sbjct: 1   DLAEVVKEIEEYFLKAAESGKEVSKLLEAGKVPYHSKF---------------------- 38

Query: 269 PPQVQEEPVQTDVKYLTWHRTTSSRSSSSRNPLGANSKDDVEDLTGDIFDSIHMISSSHA 328
              ++++     +K LTW+R+                     +L  D F+   M S SH+
Sbjct: 39  -SDLKKDHSSRVMKPLTWNRSFKP----------------KSELDSDSFEDEDMESGSHS 81

Query: 329 STLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESKGVSSHKIDKTRAVVKDLHSR 388
           STLD+LYAWE+KLYDEVKA E +R EY+ KC  LR+L+ +G  S KI+KTRA V+DLH+R
Sbjct: 82  STLDKLYAWEKKLYDEVKAEEKLRIEYEKKCAQLRRLDKRGAESSKIEKTRAAVRDLHTR 141

Query: 389 IKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYN-NA 447
           I V+I  +DSISKRI +LRD+EL PQL +LI GL+RMW+ M ECH++Q  +I  A   ++
Sbjct: 142 IIVSIQAVDSISKRINKLRDEELYPQLVELIHGLTRMWKSMLECHEIQLHIIQEAKLLDS 201

Query: 448 HSKISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSLPQKSSRR 507
                  S+SHRQ T+ LE EL    SSF+ WI AQ+ Y++A+N WL  C+ +P+     
Sbjct: 202 SPSGKPTSESHRQATLQLEAELREWHSSFSNWIDAQRSYVKALNGWLKLCL-IPEPIETD 260

Query: 508 KRRVPAPPPLRNFGPPIYATCSVWLDLLDWLPSKELTDSIKSLASETSH 556
               P  P  R   PPI+A C  W   L+ LP KE+ ++IKS AS    
Sbjct: 261 DGEPPFSPG-RLGAPPIFALCEEWSQALERLPDKEVKEAIKSFASVVHT 308


This plant protein may be a leucine zipper, but there is no experimental evidence for this. Length = 309

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 640
PF04782312 DUF632: Protein of unknown function (DUF632); Inte 100.0
cd07307194 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimeri 86.59
>PF04782 DUF632: Protein of unknown function (DUF632); InterPro: IPR006867 This conserved region contains a leucine zipper-like domain Back     alignment and domain information
Probab=100.00  E-value=2.2e-113  Score=891.30  Aligned_cols=311  Identities=49%  Similarity=0.791  Sum_probs=286.0

Q ss_pred             cHHHHHHHHHHHHHHHhccCCccchhhhcccCCCCCcccccCCCchhhhhhhhhhccCCCCCCCCCCccccccccccccc
Q 006561          209 DFFSSMKDIELLFIKASDSGKEVPRMLEANKLHFRPIFEEKDSDSMASTILKACFSCGEDPPQVQEEPVQTDVKYLTWHR  288 (640)
Q Consensus       209 dL~evvKEIe~~F~kAseSG~EVS~mLEa~K~~y~~~~~~k~~~s~~s~~l~~~~~c~~~~~~~~~~p~~~~vk~itW~r  288 (640)
                      ||++||||||+||+|||+||+|||+||||+|++||+++.....                     ...++.+++++++|+|
T Consensus         1 dl~ev~kei~~~F~kAs~sg~eVs~lLE~~k~~~~~~~~~~~~---------------------~~~~s~~~~~~~~w~~   59 (312)
T PF04782_consen    1 DLLEVVKEIDDYFLKASESGKEVSRLLEAGKIHYHSNFSDLKG---------------------KVDHSSRVLSPISWSR   59 (312)
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCCCCCcccccccc---------------------cccchhhhccccccCC
Confidence            7999999999999999999999999999999999998765211                     0122344567889999


Q ss_pred             cccCCCCCCCCCCCCCCCcccccccCCccCcccccccchHhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhc
Q 006561          289 TTSSRSSSSRNPLGANSKDDVEDLTGDIFDSIHMISSSHASTLDRLYAWERKLYDEVKASEMIRREYDSKCRILRQLESK  368 (640)
Q Consensus       289 S~SS~sssS~~pl~~~~~~d~~~~~~d~~ee~~m~sgSHSSTLdKLYAWEKKLYdEVKa~E~lRi~YeKKc~~Lr~qd~k  368 (640)
                      |++|+.               .+..++++++.||.+|+||||||||||||||||+|||++|+||++|||||++||+||+|
T Consensus        60 s~~s~~---------------~~~~~~~~~~~~~~~gshssTLdkLyaWEKKLY~EVKa~E~~r~~yeKK~~~Lr~~d~k  124 (312)
T PF04782_consen   60 SSSSRI---------------SNSDSDFDEEECMGSGSHSSTLDKLYAWEKKLYDEVKAEEKLRIEYEKKCKQLRKQDAK  124 (312)
T ss_pred             CCCCcc---------------cccccCcCcccCcccchHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHhC
Confidence            877641               11233455778999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhHhHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhccchhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCC
Q 006561          369 GVSSHKIDKTRAVVKDLHSRIKVAIHRIDSISKRIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVAYNNAH  448 (640)
Q Consensus       369 Gad~~kIDKTRa~Vk~L~TrI~VaIqsVdsiS~~I~kLRDEEL~PQL~ELI~GL~rMWk~MlECHq~Q~~ii~~a~~~~~  448 (640)
                      |+++.+|||||++|++|||||+|+||+||+||++|+|||||||||||+|||+||+||||+|+||||+|++||+++++++.
T Consensus       125 g~~~~kidkTra~v~~L~tri~Vaiq~v~siS~~I~kLRDeEL~PQL~eLi~Gl~~MWk~M~ecHq~Q~~ii~~~k~l~~  204 (312)
T PF04782_consen  125 GADSSKIDKTRASVKDLHTRIRVAIQSVDSISKRIEKLRDEELYPQLVELIQGLMRMWKSMLECHQKQFQIIQEAKSLDS  204 (312)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997766


Q ss_pred             C-cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCcccccCCCCCCCCCCCCCCchHHHH
Q 006561          449 S-KISIKSDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNWLVKCVSLPQKSSRRKRRVPAPPPLRNFGPPIYAT  527 (640)
Q Consensus       449 ~-~~~~tse~hrqaT~qLE~El~~W~ssF~~wI~aQK~YV~aLngWL~~cl~~~~e~~~~~~~~~s~~P~r~~aPpIf~l  527 (640)
                      . ...+++++||+||+|||.||++|++||++||++||+||+||||||++||.++++.++++++++|  |++.++||||+|
T Consensus       205 ~~~~~~~s~~h~~at~~Le~el~~W~~sF~~~i~~Qk~YV~aLn~WL~~~l~~~~~~~~~~~~~~s--p~~~~aPpIf~l  282 (312)
T PF04782_consen  205 SPSNEPTSESHRQATLQLEAELQNWHSSFCKWIKAQKSYVKALNGWLKLCLMQEPEETSDGRPPSS--PRRSGAPPIFVL  282 (312)
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCC--ccccCCCcHHHH
Confidence            5 4689999999999999999999999999999999999999999999999999988998888877  889999999999


Q ss_pred             HHHHHHhhccCChHHHHHHHHHHHHHHhhH
Q 006561          528 CSVWLDLLDWLPSKELTDSIKSLASETSHF  557 (640)
Q Consensus       528 C~~W~~aLdrLp~k~v~~AIksFa~~v~~l  557 (640)
                      |++|+++||+||+++|++|||+|+++||+|
T Consensus       283 C~~W~~aLd~lp~k~v~~AIk~f~~~v~~i  312 (312)
T PF04782_consen  283 CNDWSQALDRLPDKEVSEAIKSFAAVVHHI  312 (312)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999986



The proteins are found only in plants and their functions are unknown.

>cd07307 BAR The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query640
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-12
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 70.3 bits (171), Expect = 1e-12
 Identities = 95/672 (14%), Positives = 202/672 (30%), Gaps = 191/672 (28%)

Query: 63  HPID-----HQFSFQEGRGMNQQ--------YESADDLRRL---REEEGIPELEDEEEKA 106
           H +D     HQ+ +++   + +          +  D  + +    E + I   +D     
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 107 SF------HEKEQQSQDLEDDFDEPAPQTLVRPFENRNRLHDHNAPSASPTMPSAESVAS 160
                    ++E+  Q   ++      + L+ P +   R          P+M +   +  
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR---------QPSMMTRMYIEQ 115

Query: 161 ESELVNGGRSNSPPLSPVRATSSIAAHPTDQKETPVKEDCIENKVASKDFFSSMKDIELL 220
              L N  +      +  R           Q    +++  +E + A       +      
Sbjct: 116 RDRLYNDNQV-FAKYNVSRL----------QPYLKLRQALLELRPAKNVLIDGVLG---- 160

Query: 221 FIKASDSGK-----EVPRMLEANKLHFRPIF-----EEKDSDSMASTILKACFSCGEDPP 270
                 SGK     +V    +        IF          +++   + K  +    DP 
Sbjct: 161 ------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI--DPN 212

Query: 271 QVQEEPVQTDVKYLTWHRTTSSRSSSSR---NPLGANS---KDDVEDL-TGDIFDSIH-- 321
                   +++K     R  S ++   R   +    N      +V++    + F+ +   
Sbjct: 213 WTSRSDHSSNIK----LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN-LSCK 267

Query: 322 -MISSSHASTLDRLYAWERK---------LYDEVKASEMIRREYDSKCRILRQLESKGVS 371
            ++++      D L A                  +   ++ +  D + + L + E    +
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-EVLTTN 326

Query: 372 SHKIDKTRAVVKDLHSRIK----VAIHRIDSISKR-IEELRDKELQPQLEDL-------- 418
             ++      ++D  +       V   ++ +I +  +  L   E +   + L        
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386

Query: 419 --IEGLSRMW---------EVMFECHKLQFQVISVAYNNAHSKISIKSDSHRQITIHLEN 467
                LS +W          V+ + HK       V      S ISI    + ++ + LEN
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSL----VEKQPKESTISI-PSIYLELKVKLEN 441

Query: 468 ELSSLSSSFTKWISAQKFYLQAINNWLVKCVSLPQKSSRRKRRVPAPPPLRNFGPPIY-- 525
           E                    A++  +V   ++P+           PP L  +    Y  
Sbjct: 442 E-------------------YALHRSIVDHYNIPKTFDSDD---LIPPYLDQY---FYSH 476

Query: 526 -----ATC----------SVWLDLLDWLPSKELTDSIKSLASETSHFLPRQEKNQGKSGS 570
                              V+LD   +L  K                +         SGS
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLD-FRFLEQK----------------IRHDSTAWNASGS 519

Query: 571 ETAVNLLAD-DASEDWIS----GFDRFRSSLVGFLGQLNNFSENSVQM-YADLKKAIQDA 624
              +N L      + +I      ++R  ++++ FL ++    EN +   Y DL   ++ A
Sbjct: 520 --ILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE---ENLICSKYTDL---LRIA 571

Query: 625 KIKYDELVNREA 636
            +  DE +  EA
Sbjct: 572 LMAEDEAIFEEA 583


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query640
1uru_A244 Amphiphysin; endocytosis, coiled-coil, membrane cu 85.94
2q12_A 265 DIP13 alpha, DCC-interacting protein 13 alpha; APP 84.51
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1 Back     alignment and structure
Probab=85.94  E-value=19  Score=34.62  Aligned_cols=111  Identities=12%  Similarity=0.107  Sum_probs=75.0

Q ss_pred             hHHHHHHHHHHHHHHH----HHhhHHHHHHHHHHHHHHHhhhhcC---CCchhhHhHHHHHHHHhhHHHHHHHHHHHHHH
Q 006561          329 STLDRLYAWERKLYDE----VKASEMIRREYDSKCRILRQLESKG---VSSHKIDKTRAVVKDLHSRIKVAIHRIDSISK  401 (640)
Q Consensus       329 STLdKLYAWEKKLYdE----VKa~E~lRi~YeKKc~~Lr~qd~kG---ad~~kIDKTRa~Vk~L~TrI~VaIqsVdsiS~  401 (640)
                      ..|.+|.    +.|.+    +|-.+.-|+.||+.-..|.++-.++   .+..+|.++...+....-...-.-.-+-.---
T Consensus       119 ~Pl~~~~----~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~k~kd~~kl~~ae~el~~ak~~ye~ln~~L~~eLp  194 (244)
T 1uru_A          119 IPLNTYT----GQFPEMKKKVEKRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNTELHDELP  194 (244)
T ss_dssp             HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH----HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            4455555    45544    4567888999999999888887664   45566666655554444333322223333334


Q ss_pred             HhhhhhccchhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 006561          402 RIEELRDKELQPQLEDLIEGLSRMWEVMFECHKLQFQVISVA  443 (640)
Q Consensus       402 ~I~kLRDEEL~PQL~ELI~GL~rMWk~MlECHq~Q~~ii~~a  443 (640)
                      .+..+|.+-+.|+|..++.......+.|.+.|+.=..+++.+
T Consensus       195 ~l~~~~~~~~~~~l~~fv~~q~~~~~~~~~~~~~l~~~~~~l  236 (244)
T 1uru_A          195 ALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKL  236 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566778888999999999999999888888887766666644



>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query640
d2elba1268 DCC-interacting protein 13-alpha, APPL1 {Human (Ho 82.12
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: BAR/IMD domain-like
superfamily: BAR/IMD domain-like
family: BAR domain
domain: DCC-interacting protein 13-alpha, APPL1
species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.12  E-value=17  Score=33.04  Aligned_cols=39  Identities=18%  Similarity=0.188  Sum_probs=24.9

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 006561          455 SDSHRQITIHLENELSSLSSSFTKWISAQKFYLQAINNW  493 (640)
Q Consensus       455 se~hrqaT~qLE~El~~W~ssF~~wI~aQK~YV~aLngW  493 (640)
                      |..=|.....+|.++........++++.-+.|+.+++.-
T Consensus        11 SP~FRa~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~   49 (268)
T d2elba1          11 SPQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNEL   49 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344566667777777766666666666666666665543