Citrus Sinensis ID: 006570
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 640 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M9S4 | 728 | Probable LRR receptor-lik | yes | no | 0.920 | 0.809 | 0.526 | 1e-165 | |
| C0LGJ9 | 742 | Probable LRR receptor-lik | no | no | 0.879 | 0.758 | 0.522 | 1e-153 | |
| Q8LFN2 | 802 | Probable inactive leucine | no | no | 0.840 | 0.670 | 0.407 | 1e-124 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.7 | 0.375 | 0.279 | 4e-42 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.668 | 0.342 | 0.287 | 1e-37 | |
| Q9LVP0 | 1102 | Probable leucine-rich rep | no | no | 0.734 | 0.426 | 0.282 | 5e-36 | |
| Q9FN37 | 1036 | Phytosulfokine receptor 2 | no | no | 0.721 | 0.445 | 0.265 | 8e-36 | |
| Q42371 | 976 | LRR receptor-like serine/ | no | no | 0.714 | 0.468 | 0.280 | 5e-35 | |
| O22476 | 1196 | Protein BRASSINOSTEROID I | no | no | 0.767 | 0.410 | 0.263 | 6e-35 | |
| Q8GUQ5 | 1207 | Brassinosteroid LRR recep | N/A | no | 0.784 | 0.415 | 0.264 | 1e-34 |
| >sp|Q9M9S4|Y1143_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 333/633 (52%), Positives = 431/633 (68%), Gaps = 44/633 (6%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
VS QL SE+R L ++QK L+YP L+ W++WTNFCYLPSS S KI+C N VTELTV
Sbjct: 24 VSESQLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVT 83
Query: 84 GNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK 143
GN++ L F+ D FT+LTKLSNLK LSLVSLG+ GPLPS+
Sbjct: 84 GNRTV-----------------KLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQ 126
Query: 144 INRFWSLEVLNISSN-FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202
I R S S+ FI G IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNL
Sbjct: 127 IIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNL 186
Query: 203 GGNDFGPKF-PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
GGN GP+ PSL+ N++++ L+NNS S+IP +K ++L+ D+SSN F G I FL
Sbjct: 187 GGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLL 246
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
SLPS+ L+LA N LS +LP + C++KL +++S NLL GKLPSC S ++ T+
Sbjct: 247 SLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLPSCFSSKK-QTVLLFTF 305
Query: 322 NCLS---GVNTKYQHPYSFCRKEA----LAVKPPVNVKSDDEQSTRVDVGLILGIIGGVV 374
NCLS + KYQ P +FC EA AVK K E+ T +++GL++GII GV+
Sbjct: 306 NCLSINGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDKERKEEDTGIELGLVIGIIIGVI 365
Query: 375 GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV------RGSPKPAIDSRRVPQTM 428
V LVLV +R+S++ ++ E + D+++V + K D RRVPQTM
Sbjct: 366 LVSAVLAGLVLVRMRKSRSK---EEPLEANNVDQVTVCSNTTRSTTSKTVPDLRRVPQTM 422
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
RSA IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ+
Sbjct: 423 RSAVIGLSPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQK 478
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSLRDYLT 547
+ Q+L Q +E+LSKLRH HLVS+LGHCI TYQDH P GST+F+V E+ISNGSLRDYLT
Sbjct: 479 NSTQNLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLT 538
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
DW+KK++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY+I
Sbjct: 539 DWRKKEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYSI 598
Query: 608 PLPSKVRNTLSFHTD--RSSLYKI-ILIICVIT 637
PLPSKV + D + +Y+ +++I +IT
Sbjct: 599 PLPSKVGAESPSNEDGEKEDVYQFGVILIQIIT 631
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGJ9|Y2278_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 319/611 (52%), Positives = 418/611 (68%), Gaps = 48/611 (7%)
Query: 25 SIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIG 84
S Q+ SE++ L ++QK L+YP+VLQ WTD TNFC++ S SL+I+C + VTELTV G
Sbjct: 25 SESQVASSESQTLLEIQKQLQYPQVLQSWTDTTNFCHIRPSPSLRIICLHGHVTELTVTG 84
Query: 85 NKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKI 144
N++S LS +F+ + FT+LT+LS+LK LSL SLG+ G L KI
Sbjct: 85 NRTS-----------------KLSGSFH--KLFTLLTQLSSLKTLSLTSLGISGSLSPKI 125
Query: 145 --NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELN 201
SLE LN+SSNFI G+IP EI SLKNLKS+VL DN+ G V D L+ L L+EL+
Sbjct: 126 ITKLSPSLESLNLSSNFISGKIPEEIVSLKNLKSLVLRDNMFWGFVSDDLRGLSNLQELD 185
Query: 202 LGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
LGGN GP+ PSL + +V L+NNS RS+IP +K + L+ D+SSN F G I FLF
Sbjct: 186 LGGNKLGPEVPSLPSKLTTVSLKNNSFRSKIPEQIKKLNNLQSLDLSSNEFTGSIPEFLF 245
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL-NRTVVST 320
S+PS+ L+L N LS +LP + S+K+ +++SHNLL GKLPSC S S N+TV+ +
Sbjct: 246 SIPSLQILSLDQNLLSGSLPNSSCTSSKIITLDVSHNLLTGKLPSCYSSKSFSNQTVLFS 305
Query: 321 WNCLSGV---NTKYQHPYSFCRKEA---LAVKP-PVNVKSDDEQSTRVDVGLILGIIGGV 373
+NCLS + N KYQ P SFC+ +A +AV+P P K+ D+ S R+ +GL++ II GV
Sbjct: 306 FNCLSLIGTPNAKYQRPLSFCQNQASKAIAVEPIP---KAKDKDSARIKLGLVILIIIGV 362
Query: 374 VGFVVVFGLLVLVVIRRSKTTGAGD------DKYERSVADKMSV----RGSPKPAIDSRR 423
+ + LLVL+ ++R ++ D ER +DK+SV S K DSRR
Sbjct: 363 IILAAILVLLVLIALKRRRSRSEDDPFEVNNSNNERHASDKVSVCSTTTASSKSLPDSRR 422
Query: 424 VPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCL 483
VPQTMRSA IGLPP+R FSLEE+EEATN+FD +L E QLY+G L +G V+V+ +
Sbjct: 423 VPQTMRSAVIGLPPYRVFSLEELEEATNDFDAASLFCE----QLYRGCLREGIPVTVRVI 478
Query: 484 KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSL 542
KLKQ+ LPQSL Q +E+LSKLRH HLVS+LGH I + QDH + G T+F+V E+IS+GSL
Sbjct: 479 KLKQKSLPQSLAQQMEVLSKLRHMHLVSVLGHSIASNQDHNQHAGHTIFIVQEYISSGSL 538
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
RD+LT+ +KK++LKWPQRMAI IG RG+QFLH GVAPGIFGNNLK ENI+LD+ LT K+
Sbjct: 539 RDFLTNCRKKEVLKWPQRMAIAIGVARGIQFLHMGVAPGIFGNNLKIENIMLDETLTVKI 598
Query: 603 SGYNIPLPSKV 613
SGY IPLPSKV
Sbjct: 599 SGYTIPLPSKV 609
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/616 (40%), Positives = 361/616 (58%), Gaps = 78/616 (12%)
Query: 46 YPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQ 105
YP+VL W ++T+FC S SL +VC VT+L +IG+ +
Sbjct: 43 YPKVLNSWNNYTDFCNSEPSPSLTVVCYEDSVTQLHIIGDNGT----------------H 86
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
L +F+I+ F T L KL ++KVL+ VSLGLWG LP KINR SLE+LN+SSNF++G IP
Sbjct: 87 MLPKSFSINSFVTTLVKLPDVKVLTFVSLGLWGWLPQKINRLSSLEILNVSSNFLFGPIP 146
Query: 166 MEITSLKNLKSIVL---------------------------------------------- 179
E++SL L++++L
Sbjct: 147 HELSSLATLQTLILDENMFSGELPDWIDSLPSLAVLSLRKNVLNGSLPSSLSSLSGLRVL 206
Query: 180 --ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSG-L 236
A+N NG++PDL L L+ L+L GN FGP FP LS +V++IL N RS + + +
Sbjct: 207 ALANNRFNGALPDLSHLTNLQVLDLEGNSFGPLFPRLSNKLVTLILSKNKFRSAVSAEEV 266
Query: 237 KNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296
+ QL+ D+S N FVGP + L SLP+I YLN++ N+L+ L N+SC+++L FV++S
Sbjct: 267 SSLYQLQHLDLSYNTFVGPFPTSLMSLPAITYLNISHNKLTGRLSANLSCNSQLMFVDMS 326
Query: 297 HNLLIGKLPSCIG-SNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVK--PPVNVKS 353
NLL G LP+C+ S+ +R VV NCL+ N Q P SFC EALAV P
Sbjct: 327 SNLLTGSLPTCLKPSSGTSRDVVYASNCLATTNED-QRPVSFCSNEALAVGILP------ 379
Query: 354 DDEQSTRVDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRG 413
++ VG+ LG+ ++G +++ + VV+RR R + + S+
Sbjct: 380 -QRRNKVSKVGIALGVTASILGVLLLA-GALFVVLRRLNAKKTVTKSSPRLIRENASMGY 437
Query: 414 SPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT 473
+ K D+R + QTM+ +GLP +R FSLEE+E ATNNF+ + +GEGSQGQ+Y+G L
Sbjct: 438 TSKLLSDARYISQTMKLGGLGLPAYRTFSLEELEYATNNFESSAFMGEGSQGQIYRGRLK 497
Query: 474 DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533
DGS V+++CLK+K+ Q+LM H+EL++KLRHRHLVS+LGHC Y D +T S +F V
Sbjct: 498 DGSFVAIRCLKMKKSCSTQNLMHHIELIAKLRHRHLVSVLGHCFECYLDD-STVSRMFFV 556
Query: 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ NG LR +++D +L W QR+++ IG +G+QFLHTG+ PG++ NNLK +IL
Sbjct: 557 FEYVPNGELRTWISDGHMGRLLTWEQRISVAIGVAKGIQFLHTGIVPGVYDNNLKMTDIL 616
Query: 594 LDKALTAKLSGYNIPL 609
LD L AKLS YN+PL
Sbjct: 617 LDNNLAAKLSSYNLPL 632
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 230/497 (46%), Gaps = 49/497 (9%)
Query: 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRL 194
L GP+P ++ L +++S+N + GEIP ++ L NL + L+ N L GS+P ++
Sbjct: 592 LSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNS 651
Query: 195 VLLEELNLGGNDFGPKFPS---LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251
+ L+ LNL N P L ++V + L N L +P+ L N +L D+S NN
Sbjct: 652 LKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNN 711
Query: 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI--- 308
G + S L ++ ++ L + N+ + +P + +L ++++S NLL G++P+ I
Sbjct: 712 LSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGL 771
Query: 309 --------GSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTR 360
N+L V S C C + V ++ +S
Sbjct: 772 PNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGR---VVGSDCKIEGTKLRSAW 828
Query: 361 VDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAID 420
GL+LG ++ FV VF L + +R K D ER ++ K +D
Sbjct: 829 GIAGLMLGFT--IIVFVFVFSLRRWAMTKRVKQR----DDPERMEESRL------KGFVD 876
Query: 421 SR---------RVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF 471
R P ++ A P + L +I EAT++F N+IG+G G +YK
Sbjct: 877 QNLYFLSGSRSREPLSINIAMFEQPLLK-VRLGDIVEATDHFSKKNIIGDGGFGTVYKAC 935
Query: 472 LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531
L V+VK L + + M +E L K++H +LVS+LG+C + +
Sbjct: 936 LPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEK--------L 987
Query: 532 LVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590
LV E++ NGSL +L + ++L W +R+ I +GA RG+ FLH G P I ++K
Sbjct: 988 LVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKAS 1047
Query: 591 NILLDKALTAKLSGYNI 607
NILLD K++ + +
Sbjct: 1048 NILLDGDFEPKVADFGL 1064
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Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 227/491 (46%), Gaps = 63/491 (12%)
Query: 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRL 194
L GP+P + + L L +SSN +P E+ + L + L N LNGS+P ++ L
Sbjct: 659 LSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNL 718
Query: 195 VLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQ-FDISS 249
L LNL N F P LSK + + L NSL EIP + L+ D+S
Sbjct: 719 GALNVLNLDKNQFSGSLPQAMGKLSK-LYELRLSRNSLTGEIPVEIGQLQDLQSALDLSY 777
Query: 250 NNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309
NNF G I S + +L + L+L+ NQL+ +P ++ L ++ +S N L GKL
Sbjct: 778 NNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLKKQFS 837
Query: 310 SNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLILGI 369
+ + +T C S P S C + V+S+++Q ++ I
Sbjct: 838 RWPADSFLGNTGLCGS--------PLSRCNR----------VRSNNKQQGLSARSVV--I 877
Query: 370 IGGVVGFVVVFGLLVLVVI----RRS---KTTGAGDDKYERSVADKMSVRGSPKPAIDSR 422
I + + GL++LV+ +R K G G Y + S + + KP +
Sbjct: 878 ISAISALTAI-GLMILVIALFFKQRHDFFKKVGHGSTAY---TSSSSSSQATHKPLFRNG 933
Query: 423 RVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKC 482
+R E+I EAT+N +IG G G++YK L +G V+VK
Sbjct: 934 ASKSDIR-------------WEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKK 980
Query: 483 LKLKQRHLP-QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGS 541
+ K + +S + V+ L ++RHRHLV ++G+C + L+ E++ NGS
Sbjct: 981 ILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYC------SSKSEGLNLLIYEYMKNGS 1034
Query: 542 LRDYLTD-----WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
+ D+L + KKK +L W R+ I +G +GV++LH P I ++K+ N+LLD
Sbjct: 1035 IWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDS 1094
Query: 597 ALTAKLSGYNI 607
+ A L + +
Sbjct: 1095 NMEAHLGDFGL 1105
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 245/527 (46%), Gaps = 57/527 (10%)
Query: 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGE 163
Q L+ N + RF + L K N+ + L G +P ++ +L+ L ++ N GE
Sbjct: 461 QLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVGNCSALQRLQLADNGFTGE 520
Query: 164 IPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEELNLGGNDFGPKFPSLSKNIVS-- 220
+P EI L L ++ ++ N L G VP ++ +L+ L++ N+F PS ++
Sbjct: 521 LPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTLPSEVGSLYQLE 580
Query: 221 -VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSI-LYLNLAGNQLSE 278
+ L NN+L IP L N +L + + N F G I L SL + + LNL+ N+L+
Sbjct: 581 LLKLSNNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRELGSLTGLQIALNLSYNKLTG 640
Query: 279 ALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQH--PYS 336
+P +S L F+ +++N L G++PS + S ++N L+G ++ S
Sbjct: 641 EIPPELSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLGYNFSYNSLTGPIPLLRNISMSS 700
Query: 337 FCRKEALAVKPPVNVKSDDE-----QSTRVDVGL----ILGIIGGVVGFVVVFGLLVLVV 387
F E L PP+N + QST G+ I+ I V+G V + + ++V
Sbjct: 701 FIGNEGLC-GPPLNQCIQTQPFAPSQSTGKPGGMRSSKIIAITAAVIGGVSLMLIALIVY 759
Query: 388 IRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIE 447
+ R R+VA A D + P M S I PP GF+ +++
Sbjct: 760 LMRRPV---------RTVASS---------AQDGQ--PSEM-SLDIYFPPKEGFTFQDLV 798
Query: 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH-------LPQSLMQHVEL 500
AT+NFD + ++G G+ G +YK L G ++VK KL H + S +
Sbjct: 799 AATDNFDESFVVGRGACGTVYKAVLPAGYTLAVK--KLASNHEGGNNNNVDNSFRAEILT 856
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
L +RHR++V + G C N + L+ E++ GSL + L D L W +R
Sbjct: 857 LGNIRHRNIVKLHGFC--------NHQGSNLLLYEYMPKGSLGEILHDPSCN--LDWSKR 906
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I +GA +G+ +LH P IF ++K+ NILLD A + + +
Sbjct: 907 FKIALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGL 953
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FN37|PSKR2_ARATH Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 238/532 (44%), Gaps = 70/532 (13%)
Query: 107 LSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM 166
LS NF + +T NL +L+L + GL G +PS + LEVL++S N YG IP
Sbjct: 409 LSKNFIGEEIPNNVTGFDNLAILALGNCGLRGQIPSWLLNCKKLEVLDLSWNHFYGTIPH 468
Query: 167 EITSLKNLKSIVLADNLLNGSVP----DLQRLVLLEELNLGGNDF--------------G 208
I +++L I ++N L G++P +L+ L+ L D G
Sbjct: 469 WIGKMESLFYIDFSNNTLTGAIPVAITELKNLIRLNGTASQMTDSSGIPLYVKRNKSSNG 528
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILY 268
+ +S+ S+ L NN L I + +L D+S NNF G I + L ++
Sbjct: 529 LPYNQVSRFPPSIYLNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEV 588
Query: 269 LNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328
L+L+ N L ++P++ L+ +++N L G +PS S +
Sbjct: 589 LDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIPS-------------GGQFYSFPH 635
Query: 329 TKYQHPYSFCRKEALAVKPPVNVKSDD-----EQSTRVDVG-------LILGIIGGVVGF 376
+ ++ CR A+ P +V + S R + G +++ I +G
Sbjct: 636 SSFEGNLGLCR----AIDSPCDVLMSNMLNPKGSSRRNNNGGKFGRSSIVVLTISLAIGI 691
Query: 377 VVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLP 436
++ +++L + R+ DD+ D+ ++ G K S+ V S
Sbjct: 692 TLLLSVILLRISRKDV-----DDRIND--VDEETISGVSKALGPSKIV--LFHSCGC--- 739
Query: 437 PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ 496
+ S+EE+ ++TNNF N+IG G G +YK DGS+ +VK L + +
Sbjct: 740 --KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQA 797
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-L 555
VE LS+ H++LVS+ G+C G+ L+ + NGSL +L + +M L
Sbjct: 798 EVEALSRAEHKNLVSLQGYC--------KHGNDRLLIYSFMENGSLDYWLHERVDGNMTL 849
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
W R+ I GA RG+ +LH P + ++K+ NILLD+ A L+ + +
Sbjct: 850 IWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGL 901
|
Phytosulfokine receptor with a serine/threonine-protein kinase activity. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 234/499 (46%), Gaps = 42/499 (8%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L +S L L L L G +P ++ + L LN+++N + G IP ++S NL S+ +
Sbjct: 327 LGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTNLNSLNV 386
Query: 180 ADNLLNGSVP-DLQRLVLLEELNLGGNDF-GPKFPSLSK--NIVSVILRNNSLRSEIPSG 235
N +G++P Q+L + LNL N+ GP LS+ N+ ++ L NN + IPS
Sbjct: 387 HGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKINGIIPSS 446
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
L + + L + ++S N+ G + +L SI+ ++L+ N +S +P ++ + + +
Sbjct: 447 LGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQNIILLRL 506
Query: 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV--NTKYQH--PYSFCRKEALAVKPPVNV 351
+N L G + S SL VS N + + N + P SF L +
Sbjct: 507 ENNNLTGNVGSLANCLSLTVLNVSHNNLVGDIPKNNNFSRFSPDSFIGNPGLCGSWLNSP 566
Query: 352 KSDDEQSTRVDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV 411
D ++ RV + I+G +G +V+ L+VL+ R + DK
Sbjct: 567 CHDSRRTVRVSISRA-AILGIAIGGLVIL-LMVLIAACRPHNP----PPFLDGSLDKPVT 620
Query: 412 RGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF 471
+PK I + + E+I T N +IG G+ +YK
Sbjct: 621 YSTPKLVILHMNMALHV--------------YEDIMRMTENLSEKYIIGHGASSTVYKCV 666
Query: 472 LTDGSRVSVKCLKLKQRHLPQSLMQ---HVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528
L + V++K L H PQS+ Q +E+LS ++HR+LVS+ + + + GS
Sbjct: 667 LKNCKPVAIKRL---YSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSL------SHLGS 717
Query: 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588
+F +++ NGSL D L KK L W R+ I GA +G+ +LH +P I ++K
Sbjct: 718 LLFY--DYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVK 775
Query: 589 TENILLDKALTAKLSGYNI 607
+ NILLDK L A+L+ + I
Sbjct: 776 SSNILLDKDLEARLTDFGI 794
|
Receptor kinase that, together with ERL1 and ERL2, regulates aerial architecture, including inflorescence (e.g. shoot apical meristem-originating organ shape, elongation of the internode and pedicels, and adaxial-abaxial polarity), and stomatal patterning (e.g. density and clustering), probably by tuning cell division and expansion. Modulates plant transpiration efficiency by controlling stomatal density, leaf photosynthetic capacity, epidermal cell expansion, mesophyll cell proliferation and cell-cell contact. Probable major trait regulating canalization (maintenance of phenotype despite varying environment) in many aspect of the plant physiology (e.g. plant morphology, light-dependent leaves number, branch number, flowering time, phytate and mineral concentrations) by transducing microenvironmental variation into phenotypic differentiation (ecological amplifier). May maintain development integrity in heat stress conditions. Regulates cell wall composition and structure. Confers resistance to the pathogenic bacteria Ralstonia solanacearum and to the necrotrophic fungi Plectosphaerella cucumerina and Pythium irregulare, and required for callose deposition upon infection. Resistance to P.cucumerina seems cell wall-mediated. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O22476|BRI1_ARATH Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 146/555 (26%), Positives = 247/555 (44%), Gaps = 64/555 (11%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+ +NL +SL + L G +P I R +L +L +S+N G IP E+ ++L + L
Sbjct: 508 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 567
Query: 180 ADNLLNGSVPDL---------------QRLVLLEELNLGGNDFGP----KFPSL-SKNIV 219
NL NG++P +R V ++ + G +F + S+ +
Sbjct: 568 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLN 627
Query: 220 SVILRNN-SLRSEIPSG-----LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG 273
+ RN ++ S + G N + D+S N G I + S+P + LNL
Sbjct: 628 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 687
Query: 274 NQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQH 333
N +S ++P + LN +++S N L G++P + + ++ + + N LSG +
Sbjct: 688 NDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 747
Query: 334 -----PYSFCRKEALAVKP-----PVNV-------KSDDEQSTRVDVGLILGIIGGVVGF 376
P F L P P N +S + + + +G++ F
Sbjct: 748 FETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHGRRPASLAGSVAMGLL---FSF 804
Query: 377 VVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLP 436
V +FG L+LV K + + E A+ G + ++ + +I L
Sbjct: 805 VCIFG-LILVGREMRKRRRKKEAELEM-YAEGHGNSGDRTANNTNWKLTGVKEALSINLA 862
Query: 437 ----PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
P R + ++ +ATN F +LIG G G +YK L DGS V++K L +
Sbjct: 863 AFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDR 922
Query: 493 SLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK 552
M +E + K++HR+LV +LG+C G LV E + GSL D L D KK
Sbjct: 923 EFMAEMETIGKIKHRNLVPLLGYC--------KVGDERLLVYEFMKYGSLEDVLHDPKKA 974
Query: 553 DM-LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611
+ L W R I IG+ RG+ FLH +P I ++K+ N+LLD+ L A++S + + +
Sbjct: 975 GVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGM---A 1031
Query: 612 KVRNTLSFHTDRSSL 626
++ + + H S+L
Sbjct: 1032 RLMSAMDTHLSVSTL 1046
|
Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. Binds brassinolide, and less effectively castasterone, but not 2,3,22,23-O-tetramethylbrassinolide or ecdysone. May be involved in a feedback regulation of brassinosteroid biosynthesis. Phosphorylates BRI1-associated receptor kinase 1 (BAK1), Transthyretin-Like protein (TTL) and SERK1 on 'Ser-299' and 'Thr-462' in vitro. May have a guanylyl cyclase activity. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GUQ5|BRI1_SOLLC Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 151/570 (26%), Positives = 254/570 (44%), Gaps = 68/570 (11%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLG---LWGPLPSKINRFWSLEVLNISSNFIY 161
++L +FN D I LSN L+ +SL L G +P+ + R +L +L + +N I
Sbjct: 502 ENLILDFN-DLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSIS 560
Query: 162 GEIPMEITSLKNLKSIVLADNLLNGSVP---------------DLQRLVLLE-----ELN 201
G IP E+ + ++L + L N LNGS+P +R V ++ E +
Sbjct: 561 GNIPAELGNCQSLIWLDLNTNFLNGSIPPPLFKQSGNIAVALLTGKRYVYIKNDGSKECH 620
Query: 202 LGGN--DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKN--FDQ---LKQFDISSNNFVG 254
GN +FG + + + R+ + + G+ F+ + D+S N G
Sbjct: 621 GAGNLLEFGGI---RQEQLDRISTRHPCNFTRVYRGITQPTFNHNGSMIFLDLSYNKLEG 677
Query: 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
I L ++ + LNL N LS +P + + +++S+N G +P+ + S +L
Sbjct: 678 SIPKELGAMYYLSILNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLL 737
Query: 315 RTVVSTWNCLSGVNTKYQH-----PYSFCRKEALAVKPPV----NVKSDDEQ---STRVD 362
+ + N LSG+ + Y F P+ KSD Q S R
Sbjct: 738 GEIDLSNNNLSGMIPESAPFDTFPDYRFANNSLCGYPLPIPCSSGPKSDANQHQKSHRRQ 797
Query: 363 VGLILGIIGGVV-GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDS 421
L + G++ +FGL+++ + + + K E ++ M A +
Sbjct: 798 ASLAGSVAMGLLFSLFCIFGLIIVAIETKKRRR-----KKEAALEAYMDGHSHSATANSA 852
Query: 422 RRVPQTMRSAAIGLP----PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR 477
+ + +I L P R + ++ EATN F +L+G G G +YK L DGS
Sbjct: 853 WKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSV 912
Query: 478 VSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHI 537
V++K L + +E + K++HR+LV +LG+C G LV E++
Sbjct: 913 VAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYC--------KVGEERLLVYEYM 964
Query: 538 SNGSLRDYLTDWKKKDM-LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
GSL D L D KK + L WP R I IGA RG+ FLH P I ++K+ N+LLD+
Sbjct: 965 KYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDE 1024
Query: 597 ALTAKLSGYNIPLPSKVRNTLSFHTDRSSL 626
L A++S + + +++ + + H S+L
Sbjct: 1025 NLEARVSDFGM---ARLMSAMDTHLSVSTL 1051
|
Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. Solanum lycopersicum (taxid: 4081) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 640 | ||||||
| 224138008 | 745 | predicted protein [Populus trichocarpa] | 0.923 | 0.793 | 0.685 | 0.0 | |
| 255558192 | 749 | Serine/threonine-protein kinase PBS1, pu | 0.909 | 0.777 | 0.653 | 0.0 | |
| 296086415 | 720 | unnamed protein product [Vitis vinifera] | 0.915 | 0.813 | 0.631 | 0.0 | |
| 449434813 | 728 | PREDICTED: probable LRR receptor-like se | 0.932 | 0.820 | 0.605 | 0.0 | |
| 359473374 | 746 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.937 | 0.804 | 0.623 | 0.0 | |
| 356497862 | 734 | PREDICTED: probable LRR receptor-like se | 0.964 | 0.840 | 0.575 | 0.0 | |
| 356501912 | 708 | PREDICTED: probable LRR receptor-like se | 0.9 | 0.813 | 0.553 | 1e-179 | |
| 297844344 | 733 | hypothetical protein ARALYDRAFT_471612 [ | 0.881 | 0.769 | 0.545 | 1e-167 | |
| 75191439 | 728 | RecName: Full=Probable LRR receptor-like | 0.920 | 0.809 | 0.526 | 1e-163 | |
| 15223744 | 747 | putative leucine-rich repeat transmembra | 0.882 | 0.756 | 0.539 | 1e-163 |
| >gi|224138008|ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/613 (68%), Positives = 492/613 (80%), Gaps = 22/613 (3%)
Query: 11 FKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKI 70
F + ++ V +S GQL PSETRILFQVQ+LLEYP+VLQGW +WTNFCYLP S SLK+
Sbjct: 10 FAALFTLIVMQVSISRGQLAPSETRILFQVQQLLEYPQVLQGWNNWTNFCYLPPSPSLKV 69
Query: 71 VCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLS 130
VC+NS VTELTV+GNKSS + S S Q +LS NF+ID FFT LT LSNLKVLS
Sbjct: 70 VCSNSHVTELTVVGNKSSSSAS------PSSPKQNTLSDNFSIDAFFTTLTNLSNLKVLS 123
Query: 131 LVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD 190
LVSLGLWGPLP+KINRFWSL+ LNIS NFI+G+IP +I SLKNL S+VLA NLLNG+VPD
Sbjct: 124 LVSLGLWGPLPTKINRFWSLQALNISYNFIHGQIPQDILSLKNLTSLVLAHNLLNGTVPD 183
Query: 191 LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN 250
L+ LVLL+ELNLGGN GP FPSL N+V++IL+NNSLRS IPS +K F+QL+Q DISSN
Sbjct: 184 LRSLVLLQELNLGGNHLGPTFPSLGNNLVTIILKNNSLRSVIPSEIKKFNQLQQLDISSN 243
Query: 251 NFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+GPI LFSLPS+ YL+LA NQLS ALP NISCS KL FV+ISHN+LIGKLPSCI S
Sbjct: 244 KLIGPIPPALFSLPSLQYLDLAQNQLSGALPTNISCSVKLQFVDISHNILIGKLPSCIAS 303
Query: 311 NSLNRTVVSTWNCLS-GVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLILGI 369
N+ RTV+S+WNCLS G N YQHPYSFC KEALAVKPP KS + +S+ + +G++LGI
Sbjct: 304 NTSTRTVISSWNCLSGGKNASYQHPYSFCNKEALAVKPP--AKSKEHKSSTIKLGIVLGI 361
Query: 370 IGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKY---------ERSVADKMSVRGSPKPAID 420
+GGV+G V GLL+ V+IRRSKT A D Y +RSVA K SVR A+D
Sbjct: 362 VGGVLGIAGVLGLLIFVIIRRSKTVAADDHVYSIFDGSVTSKRSVASKKSVRR----AVD 417
Query: 421 SRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSV 480
SRRVPQTMRSAAIGLPP+R F+LEE+E+ATNNFDP N IGEGSQGQLYKG L DGS V V
Sbjct: 418 SRRVPQTMRSAAIGLPPYRVFTLEEMEDATNNFDPLNFIGEGSQGQLYKGCLIDGSVVLV 477
Query: 481 KCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540
KC+KLKQ++LPQS++Q +E+LSKLRH HLVSILGH I+TYQDH +T TVF+VLEH+SNG
Sbjct: 478 KCVKLKQKNLPQSMIQQIEVLSKLRHLHLVSILGHTIVTYQDHSSTAGTVFVVLEHVSNG 537
Query: 541 SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTA 600
SLRDYL D +K++ML+WPQRMAIIIG RG+QFLHTGVAPGIFGNN+K EN+LLD LTA
Sbjct: 538 SLRDYLADERKREMLRWPQRMAIIIGVARGIQFLHTGVAPGIFGNNVKIENVLLDDTLTA 597
Query: 601 KLSGYNIPLPSKV 613
KLS Y IPLPSKV
Sbjct: 598 KLSDYKIPLPSKV 610
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558192|ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] gi|223540615|gb|EEF42178.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/611 (65%), Positives = 479/611 (78%), Gaps = 29/611 (4%)
Query: 22 VPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELT 81
PVS+GQL+PSETRILFQVQKLLEYP+VLQ WT+WTNFC+LP S SLKIVC+N VTELT
Sbjct: 21 APVSVGQLSPSETRILFQVQKLLEYPQVLQRWTNWTNFCWLPPSPSLKIVCSNGHVTELT 80
Query: 82 VIGNKSSPAHSPKP-TFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPL 140
VIGN++SP+ PKP F S+Q+LS +F+ID FFT+LTKLSNLKVLSLVSLGLWGP
Sbjct: 81 VIGNRTSPSQIPKPINSNNFQVSRQTLSKSFSIDAFFTVLTKLSNLKVLSLVSLGLWGPF 140
Query: 141 PSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEEL 200
P+KINR WSLEVLN+SSNFIYG IP ++ SLKNL S+VL+DNLL G VPDL+ L LL+EL
Sbjct: 141 PAKINRLWSLEVLNVSSNFIYGAIPQQVVSLKNLSSLVLSDNLLKGPVPDLKSLALLQEL 200
Query: 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260
+LGGN+ GP FPS+SK++V+VIL NNSLRS IPS +KNF+QL+Q DISSN +GP+ S L
Sbjct: 201 DLGGNNLGPNFPSISKSVVTVILGNNSLRSIIPSEIKNFNQLQQLDISSNKLIGPVPSSL 260
Query: 261 FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVST 320
FSLPSI +L+LA NQLS ALP NISC+ KL FV+IS NLLIGKLPSCI SNS NRTV+S+
Sbjct: 261 FSLPSIQFLDLAQNQLSGALPSNISCNFKLKFVDISKNLLIGKLPSCIASNSSNRTVISS 320
Query: 321 WNCL-SGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLILGIIGGVVGFVVV 379
WNCL SG N+ QHP SFC KEALAVKPPV +E + + +GLIL IIGGVV +
Sbjct: 321 WNCLSSGANSSSQHPLSFCHKEALAVKPPVET---EEHKSTIQIGLILAIIGGVV-GIAG 376
Query: 380 FGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPK-----------------PAIDSR 422
LL+L++IRRSK G + +E S+ DK+SV S A S
Sbjct: 377 ALLLILIIIRRSKRRANG-ETFEGSMIDKISVVSSSVPTVDSSTLIKWKLCEFMQACASD 435
Query: 423 RVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKC 482
RS+A+ +EEIE+ATNNFDP N +GEGSQGQLYKG+L DG+ V VKC
Sbjct: 436 NEVSCNRSSAVP-----RVHVEEIEDATNNFDPLNFMGEGSQGQLYKGWLRDGAVVLVKC 490
Query: 483 LKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
+KLKQ++LPQSL+QH+E+LSKLRH HLVS+LGHCI+TYQDHP T +TVF+VLEH+SNGSL
Sbjct: 491 VKLKQKNLPQSLVQHMEVLSKLRHLHLVSVLGHCIVTYQDHPRTATTVFVVLEHVSNGSL 550
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
DYLTD +KKD+LKWPQRM+I +G RG+QFLHTGVAPGIFGNN+K EN+LLD++LTAKL
Sbjct: 551 SDYLTDRRKKDILKWPQRMSITVGVARGIQFLHTGVAPGIFGNNIKIENVLLDESLTAKL 610
Query: 603 SGYNIPLPSKV 613
S Y IP+PSKV
Sbjct: 611 SNYTIPMPSKV 621
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086415|emb|CBI32004.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/614 (63%), Positives = 473/614 (77%), Gaps = 28/614 (4%)
Query: 1 MEKFRVVSLCFKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFC 60
ME F V CF ++IF PVS+GQLTP+E RIL QVQ+LLEYPE LQGW +WT+FC
Sbjct: 1 MESFWVF-FCFLFSVIIF----PVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFC 55
Query: 61 YLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTIL 120
YLP S SLKIVCT++RVTELT+IGNKSSP+ F+ID FFT+L
Sbjct: 56 YLPHSPSLKIVCTDNRVTELTIIGNKSSPS-------------------KFSIDAFFTVL 96
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180
TKLS+++VLSLVSLG+WG LP K+NRF +LEVLNISSNFIYGE+P I++ +L+SIVLA
Sbjct: 97 TKLSHVQVLSLVSLGMWGHLPPKVNRFQALEVLNISSNFIYGELPRTISTFISLRSIVLA 156
Query: 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFD 240
DNLLNGSVPDL+ L+LLEELNLG N FGP+FPSL ++VSV+L+NNSLRS IP GL NFD
Sbjct: 157 DNLLNGSVPDLRSLLLLEELNLGDNRFGPEFPSLGASLVSVVLKNNSLRSVIPLGLMNFD 216
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
+L+QFDISSN FVGPI S +F LPSI YLNLA NQ + A NISCS L FV+ISHN L
Sbjct: 217 RLQQFDISSNKFVGPIPSSIFYLPSIQYLNLAKNQFTGAFQTNISCSGNLRFVDISHNHL 276
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTR 360
IGKLPSC+ SNS N TV+S+WNCLSG N YQ P S CRKEALAVKPP +D Q +
Sbjct: 277 IGKLPSCVRSNSSNLTVISSWNCLSGGNLGYQLPNSVCRKEALAVKPPTR---NDAQKSS 333
Query: 361 VDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYER-SVADKMSVRGSPKPAI 419
+GLILG++ G+VG +VV GLL L + R+S+ + D + + SVA K + S KP
Sbjct: 334 SKLGLILGVVAGIVGVLVVLGLLTLAIFRKSRPNKSETDIFNQGSVAYKSPLHSSSKPIS 393
Query: 420 DSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVS 479
++R VP TM +GLPP+ F+LEE+E+ATNNFDP+NLI EGSQGQ YKG+L DGS V
Sbjct: 394 EARHVPTTMGFGTLGLPPYHVFTLEEMEDATNNFDPSNLIAEGSQGQSYKGWLRDGSEVL 453
Query: 480 VKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
VKCLKLK +H PQSL Q +E ++KLRH+HLVS+LGHCI+TYQ+HPNT STVFLV+EH++N
Sbjct: 454 VKCLKLKHKHSPQSLPQQMEAVTKLRHQHLVSVLGHCIVTYQEHPNTASTVFLVVEHVAN 513
Query: 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599
GSLRD+LTD +++++LKWPQR+ I IG RG+QFLHTG APGIFGNNLK EN+LL++ LT
Sbjct: 514 GSLRDHLTDRRRREILKWPQRLGISIGIARGIQFLHTGNAPGIFGNNLKIENVLLNEKLT 573
Query: 600 AKLSGYNIPLPSKV 613
K+S YNIPL KV
Sbjct: 574 TKISNYNIPLRFKV 587
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434813|ref|XP_004135190.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cucumis sativus] gi|449478441|ref|XP_004155319.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/604 (60%), Positives = 457/604 (75%), Gaps = 7/604 (1%)
Query: 7 VSLCFKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSS 66
VS F IF ++ PVS GQL PSETRILF++QKLLEYP QGW++WTNFCYLP S
Sbjct: 6 VSFSFWFPAFIFAVIFPVSTGQLPPSETRILFEIQKLLEYPVAFQGWSNWTNFCYLPPSP 65
Query: 67 SLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNL 126
SLKIVC+ + +TELTVIGNKSSP+ +PK S Q+LS +F+ID FFT+LTKLSNL
Sbjct: 66 SLKIVCSGNHITELTVIGNKSSPSKAPKSVSVSSIPSPQTLSNSFSIDSFFTVLTKLSNL 125
Query: 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG 186
++LSLVSLGLWGP PSK+NRF SLEVLNISSNFIYG IP I+ L++LKS+VLADNLLNG
Sbjct: 126 RLLSLVSLGLWGPFPSKVNRFSSLEVLNISSNFIYGGIPTTISKLQSLKSLVLADNLLNG 185
Query: 187 SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFD 246
SVPDL+ L +LEELNLG N G K PSL +N++ VILR N RSEIPS + ++L+ FD
Sbjct: 186 SVPDLRGLAVLEELNLGQNQLGQKVPSLGENLMIVILRKNLFRSEIPSRILQLNKLQLFD 245
Query: 247 ISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306
IS N F+GP+ + LFSLP++ YLNLA NQLS AL +N +C+ L FV+ISHNLLIGKLPS
Sbjct: 246 ISYNKFLGPVHASLFSLPAVQYLNLAYNQLSGALSINTTCNRNLKFVDISHNLLIGKLPS 305
Query: 307 CIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLI 366
CI NS NRTV +WNCLS ++K QH YS+C KEA+AVKPP +V+ +Q +G +
Sbjct: 306 CIRPNSSNRTVNISWNCLSSGSSKDQHTYSYCHKEAMAVKPPGDVQ---KQKISSKLGFM 362
Query: 367 LGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQ 426
L +IGG VG V LLV +IR + G+ KYE+S ADK+SVRGSP P +R VPQ
Sbjct: 363 LAVIGGAVGISGVVLLLVYAIIRNRRRRRFGETKYEKSTADKLSVRGSPLP---NRHVPQ 419
Query: 427 TMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLK 486
T R A+GLPP+R F+LEEIE+ T NFDP+N+ + Q + YKG+L DGS V +KC KLK
Sbjct: 420 T-RLPALGLPPYRVFTLEEIEDITKNFDPSNVAAKEPQAKTYKGWLPDGSVVLIKCFKLK 478
Query: 487 QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
Q+ +PQ+L +H+E L +RHRHLVS+LGHC T+QD N +TVF+V E+ISNGSL+D L
Sbjct: 479 QKLIPQALARHMEELPNMRHRHLVSVLGHCTFTHQDQLNPATTVFVVNEYISNGSLKDCL 538
Query: 547 TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
TDWK++D LKWPQRM I IG RG+Q LHTG+A GIFGN++K ++ILLD+ L+AK+S YN
Sbjct: 539 TDWKRRDALKWPQRMGITIGIARGIQHLHTGMASGIFGNDIKIDSILLDETLSAKISNYN 598
Query: 607 IPLP 610
I +P
Sbjct: 599 ILMP 602
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359473374|ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/626 (62%), Positives = 474/626 (75%), Gaps = 26/626 (4%)
Query: 1 MEKFRVVSLCFKLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFC 60
ME F V CF ++IF PVS+GQLTP+E RIL QVQ+LLEYPE LQGW +WT+FC
Sbjct: 1 MESFWVF-FCFLFSVIIF----PVSMGQLTPTEGRILLQVQQLLEYPEALQGWNNWTSFC 55
Query: 61 YLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTIL 120
YLP S SLKIVCT++RVTELT+IGNKSSP+ S G SQQ+LS F+ID FFT+L
Sbjct: 56 YLPHSPSLKIVCTDNRVTELTIIGNKSSPSVS-----GDLKVSQQTLSEKFSIDAFFTVL 110
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180
TKLS+++VLSLVSLG+WG LP K+NRF +LEVLNISSNFIYGE+P I++ +L+SIVLA
Sbjct: 111 TKLSHVQVLSLVSLGMWGHLPPKVNRFQALEVLNISSNFIYGELPRTISTFISLRSIVLA 170
Query: 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFD 240
DNLLNGSVPDL+ L+LLEELNLG N FGP+FPSL ++VSV+L+NNSLRS IP GL NFD
Sbjct: 171 DNLLNGSVPDLRSLLLLEELNLGDNRFGPEFPSLGASLVSVVLKNNSLRSVIPLGLMNFD 230
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
+L+QFDISSN FVGPI S +F LPSI YLNLA NQ + A NISCS L FV+ISHN L
Sbjct: 231 RLQQFDISSNKFVGPIPSSIFYLPSIQYLNLAKNQFTGAFQTNISCSGNLRFVDISHNHL 290
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTR 360
IGKLPSC+ SNS N TV+S+WNCLSG N YQ P S CRKEALAVKPP +D Q +
Sbjct: 291 IGKLPSCVRSNSSNLTVISSWNCLSGGNLGYQLPNSVCRKEALAVKPPTR---NDAQKSS 347
Query: 361 VDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDDKYER-SVADKMSVRGSPKPAI 419
+GLILG++ G+VG +VV GLL L + R+S+ + D + + SVA K + S KP
Sbjct: 348 SKLGLILGVVAGIVGVLVVLGLLTLAIFRKSRPNKSETDIFNQGSVAYKSPLHSSSKPIS 407
Query: 420 DSRR--------VPQTMRSA----AIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQL 467
++ + QT G P F LEE+E+ATNNFDP+NLI EGSQGQ
Sbjct: 408 EASKPFALLFLLCEQTCAHHNGVRHTGAPTVSCFHLEEMEDATNNFDPSNLIAEGSQGQS 467
Query: 468 YKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527
YKG+L DGS V VKCLKLK +H PQSL Q +E ++KLRH+HLVS+LGHCI+TYQ+HPNT
Sbjct: 468 YKGWLRDGSEVLVKCLKLKHKHSPQSLPQQMEAVTKLRHQHLVSVLGHCIVTYQEHPNTA 527
Query: 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587
STVFLV+EH++NGSLRD+LTD +++++LKWPQR+ I IG RG+QFLHTG APGIFGNNL
Sbjct: 528 STVFLVVEHVANGSLRDHLTDRRRREILKWPQRLGISIGIARGIQFLHTGNAPGIFGNNL 587
Query: 588 KTENILLDKALTAKLSGYNIPLPSKV 613
K EN+LL++ LT K+S YNIPL KV
Sbjct: 588 KIENVLLNEKLTTKISNYNIPLRFKV 613
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497862|ref|XP_003517775.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/646 (57%), Positives = 464/646 (71%), Gaps = 29/646 (4%)
Query: 1 MEKFRVVSLCF---KLFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWT 57
M+ F +VSL + + +I ++L P+ QLT SE RIL QVQKLLEYP+ L GWT+ T
Sbjct: 1 MKNF-LVSLYYLFPAIIAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALHGWTNLT 59
Query: 58 NFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFF 117
NFC LPSS SL IVC+N VTELTV+GN S ++LS F+I+ FF
Sbjct: 60 NFCSLPSSPSLNIVCSNGHVTELTVVGN-----------------SSETLSERFSIESFF 102
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
T+LTKLSNLKVLSLVSLGLWGPLPSKI+RFWSLEV+N SSNFIYGEI ++SLKNLKS+
Sbjct: 103 TVLTKLSNLKVLSLVSLGLWGPLPSKIDRFWSLEVMNFSSNFIYGEITPSVSSLKNLKSL 162
Query: 178 VLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLK 237
VLADNL NGSVPDL +L LEELNL GN GP+FPSLSKN+V VILRNNSLR IP L
Sbjct: 163 VLADNLFNGSVPDLGKLASLEELNLSGNKLGPEFPSLSKNLVRVILRNNSLRCRIPPQLM 222
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
+ +L+ FDISSN G I SF+FSLPS+ YL LA NQLS +L +N+SCS+ L FV+ISH
Sbjct: 223 HVYKLELFDISSNVIFGNIPSFIFSLPSLKYLKLASNQLSGSLSLNVSCSSSLTFVDISH 282
Query: 298 NLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRK-EALAVKPPVNVKSDDE 356
NLL+G LPSC+GS + NRT + NCL + Q+P S+C+K EALAV P ++KS +
Sbjct: 283 NLLVGTLPSCVGSKASNRTTLYYGNCLINRSLSDQYPSSYCQKVEALAVIKP-SIKSQKK 341
Query: 357 QSTRVDVGLILGIIGGVVGFVVVFGLLVLVVIRRSKTTGAGDD-KYERSVADKMSVRGSP 415
+ + +G ILGI+GGVVG + LL+ + R+SK A D + S D SVR P
Sbjct: 342 E-PEMQLGQILGIVGGVVGISGLLALLIWCIFRKSKPEKADSDYSIDISAPDNFSVRAYP 400
Query: 416 KPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDG 475
+P I++RR P MR +G PP+ FSLEEIE+ATNNFDP+NLI EGSQGQLYKG+ DG
Sbjct: 401 RPNINARRPPLPMRQPFLGFPPYCIFSLEEIEDATNNFDPSNLIAEGSQGQLYKGWHIDG 460
Query: 476 SRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535
S V V C+KLKQ+ L ++ +Q +++L LRHR+LVS+LGHCI+T+QD P STVF+V E
Sbjct: 461 SMVMVNCVKLKQKSLYKNSIQSLKVLPYLRHRNLVSVLGHCIITHQDRPQMISTVFIVFE 520
Query: 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
H+SN SLRDYL D +K++MLKWPQRM I IG RG+QFLHT V PGIFGNN+K ENILLD
Sbjct: 521 HVSNVSLRDYLADRRKREMLKWPQRMEISIGIGRGIQFLHTRVHPGIFGNNIKIENILLD 580
Query: 596 KALTAKLSGYNIPLPSKVRNTLSFHTD---RSSLYKI-ILIICVIT 637
L K+SGY+IP PSKVR + D + +Y+ ++++ VIT
Sbjct: 581 DCLNGKVSGYSIPWPSKVRVRKQYIIDDAEKEDIYQFGVILLQVIT 626
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501912|ref|XP_003519767.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 348/629 (55%), Positives = 434/629 (68%), Gaps = 53/629 (8%)
Query: 16 VIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNS 75
+I ++L P+ QLT SE RIL QVQKLLEYP+ LQGWT+ TNFC LP L IVC N
Sbjct: 18 IILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALQGWTNLTNFCSLPPP--LSIVCFNG 75
Query: 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135
VTELTV+GN S +LS F+I+ FFT+LTKLSN+KVLSLVSLG
Sbjct: 76 HVTELTVVGN-----------------SSWTLSERFSIESFFTVLTKLSNMKVLSLVSLG 118
Query: 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLV 195
LWGPLPSKI+RFWSLEV+N SSNFIYGEI ++SLKNLKS+VLA+NL NGSVPDL +L
Sbjct: 119 LWGPLPSKIDRFWSLEVMNFSSNFIYGEISPSVSSLKNLKSLVLANNLFNGSVPDLGKLA 178
Query: 196 LLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGP 255
LEELNL GN GP+FPSLSKN+V VILRNNSLR IP L + +L+ FDISSN G
Sbjct: 179 SLEELNLSGNKLGPEFPSLSKNLVRVILRNNSLRCRIPPQLIHVYKLELFDISSNVIFGN 238
Query: 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNR 315
I SF+FSLPS+ YLNLA NQLS L +N+SCS+ L FV+ISHNLL+G LPSCIGSN+ NR
Sbjct: 239 IPSFIFSLPSLKYLNLASNQLSGYLSLNVSCSSSLTFVDISHNLLVGTLPSCIGSNASNR 298
Query: 316 TVVSTWNCLSGVN-TKYQHPYSFCRK-EAL-AVKPPVNVKSDDEQSTRVDVGLILGIIGG 372
T + NCL + Q+P S+C+K E+L AVKP + + + + + I+G + G
Sbjct: 299 TTLYYGNCLVTRSLLSDQYPSSYCQKVESLAAVKPSIKSQKREPEMELGQIIGIVGGVVG 358
Query: 373 VVGFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAA 432
+ G +V LL+ + R+SK A RR P MR
Sbjct: 359 IAGLMV---LLIWCIFRKSKLEKA------------------------DRRPPLPMRQPV 391
Query: 433 IGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
+G PP+ FS+EEIE+ATNNFDP+NLI EGSQ QLYKG+L DGS V V KLKQ+ L +
Sbjct: 392 LGFPPYCIFSIEEIEDATNNFDPSNLIAEGSQEQLYKGWLIDGSMVMVNRNKLKQKSLHK 451
Query: 493 SLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK 552
+ +Q +++L LRHRHLVS+LGHC++T+ DHP ST+F+V EH+SN SLRDYL D +K+
Sbjct: 452 NSIQSLKVLPYLRHRHLVSVLGHCVITHHDHPQMISTIFIVFEHVSNVSLRDYLADRRKR 511
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612
+MLKWPQRMAI IG RG+QFLHT V PGIFGNN+K ENILLD L AK+SGY+IP PSK
Sbjct: 512 EMLKWPQRMAISIGIARGIQFLHTRVHPGIFGNNIKIENILLDDCLNAKVSGYSIPWPSK 571
Query: 613 VRNTLSF---HTDRSSLYKI-ILIICVIT 637
VR + ++ +Y+ ++++ VIT
Sbjct: 572 VRVRKEYVINDAEKEDIYQFGVILLEVIT 600
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297844344|ref|XP_002890053.1| hypothetical protein ARALYDRAFT_471612 [Arabidopsis lyrata subsp. lyrata] gi|297335895|gb|EFH66312.1| hypothetical protein ARALYDRAFT_471612 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 328/601 (54%), Positives = 421/601 (70%), Gaps = 37/601 (6%)
Query: 25 SIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIG 84
S QL SE+R L ++QK L+YP +L+ W++ TNFCYLPSS S KI+C N VTELTV G
Sbjct: 28 SESQLISSESRTLLEIQKHLQYPPILRSWSNRTNFCYLPSSPSFKILCFNGHVTELTVTG 87
Query: 85 NKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKI 144
N++ L ++ D FT+LTKLSNLK LSLVSLG+ GPLP+KI
Sbjct: 88 NRTV-----------------KLPGRYSSDSLFTVLTKLSNLKTLSLVSLGISGPLPTKI 130
Query: 145 NR-FWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203
R SL+ LN+SSNFI G+IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNLG
Sbjct: 131 IRLSSSLQSLNLSSNFISGKIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNLG 190
Query: 204 GNDFGPK-FPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262
GN GP+ PSL+ N+++V L+NNS S+IP +K +L+ D+SSN F G I FLFS
Sbjct: 191 GNKLGPEVLPSLASNLITVSLKNNSFGSKIPEQIKKLSKLQNLDLSSNKFTGSIPRFLFS 250
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322
LPS+ L+LA N LS +LP + CS+KL +++S NLL GKLPSC S +TV+ T+N
Sbjct: 251 LPSLQNLSLAQNLLSGSLPNSSLCSSKLRILDVSRNLLTGKLPSCFFSK--KQTVLFTFN 308
Query: 323 CLS---GVNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDVGLILG-IIGGVVGFVV 378
CLS + KYQ P +FC EA V + D++ + D G+ LG +IG ++G V+
Sbjct: 309 CLSIKGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDQERKKEDTGIELGLVIGIIIGVVL 368
Query: 379 VFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRG------SPKPAIDSRRVPQTMRSAA 432
V +L +++ R + + + ++ +E + DK VR + K D RRVPQTMRSA
Sbjct: 369 VSAVLAGLILFRMRKSKSKEELFEANNVDK-EVRSNTTRSTTSKTVPDPRRVPQTMRSAV 427
Query: 433 IGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ++ Q
Sbjct: 428 IGLSPYRVFSLEELEEATNNFDAANLCGE----QLYKGCLREGIAVTVRCIKLKQKNSTQ 483
Query: 493 SLMQHVELLSKLRHRHLVSILGHCILTYQD-HPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+L Q +E+LSKLRH HLVS+LGHCI TYQD HP GST+F+V E+ISNGSLRDYL DW+K
Sbjct: 484 NLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLIDWRK 543
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611
K++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY IPLPS
Sbjct: 544 KEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYTIPLPS 603
Query: 612 K 612
K
Sbjct: 604 K 604
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75191439|sp|Q9M9S4.1|Y1143_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g14390; Flags: Precursor gi|7262681|gb|AAF43939.1|AC012188_16 Contains similarity to a Receptor-like Protein Kinase 5 Precursor from Arabidopsis thaliana gi|1350783 and contains an Eukaryotic Protein Kinase PF|00069 domain and Leucine Rich PF|00560 repeats [Arabidopsis thaliana] gi|224589392|gb|ACN59230.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 333/633 (52%), Positives = 431/633 (68%), Gaps = 44/633 (6%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
VS QL SE+R L ++QK L+YP L+ W++WTNFCYLPSS S KI+C N VTELTV
Sbjct: 24 VSESQLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVT 83
Query: 84 GNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK 143
GN++ L F+ D FT+LTKLSNLK LSLVSLG+ GPLPS+
Sbjct: 84 GNRTV-----------------KLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQ 126
Query: 144 INRFWSLEVLNISSN-FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202
I R S S+ FI G IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNL
Sbjct: 127 IIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNL 186
Query: 203 GGNDFGPKF-PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
GGN GP+ PSL+ N++++ L+NNS S+IP +K ++L+ D+SSN F G I FL
Sbjct: 187 GGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLL 246
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
SLPS+ L+LA N LS +LP + C++KL +++S NLL GKLPSC S ++ T+
Sbjct: 247 SLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLPSCFSSKK-QTVLLFTF 305
Query: 322 NCLS---GVNTKYQHPYSFCRKEA----LAVKPPVNVKSDDEQSTRVDVGLILGIIGGVV 374
NCLS + KYQ P +FC EA AVK K E+ T +++GL++GII GV+
Sbjct: 306 NCLSINGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDKERKEEDTGIELGLVIGIIIGVI 365
Query: 375 GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV------RGSPKPAIDSRRVPQTM 428
V LVLV +R+S++ ++ E + D+++V + K D RRVPQTM
Sbjct: 366 LVSAVLAGLVLVRMRKSRSK---EEPLEANNVDQVTVCSNTTRSTTSKTVPDLRRVPQTM 422
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
RSA IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ+
Sbjct: 423 RSAVIGLSPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQK 478
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSLRDYLT 547
+ Q+L Q +E+LSKLRH HLVS+LGHCI TYQDH P GST+F+V E+ISNGSLRDYLT
Sbjct: 479 NSTQNLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLT 538
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
DW+KK++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY+I
Sbjct: 539 DWRKKEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYSI 598
Query: 608 PLPSKVRNTLSFHTD--RSSLYKI-ILIICVIT 637
PLPSKV + D + +Y+ +++I +IT
Sbjct: 599 PLPSKVGAESPSNEDGEKEDVYQFGVILIQIIT 631
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15223744|ref|NP_172891.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332191036|gb|AEE29157.1| putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 327/606 (53%), Positives = 418/606 (68%), Gaps = 41/606 (6%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
VS QL SE+R L ++QK L+YP L+ W++WTNFCYLPSS S KI+C N VTELTV
Sbjct: 24 VSESQLISSESRTLLEIQKHLQYPPTLRSWSNWTNFCYLPSSPSFKILCFNGHVTELTVT 83
Query: 84 GNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK 143
GN++ L F+ D FT+LTKLSNLK LSLVSLG+ GPLPS+
Sbjct: 84 GNRTV-----------------KLPGRFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQ 126
Query: 144 INRFWSLEVLNISSN-FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202
I R S S+ FI G IP EI+SLKNL+S+VLA+NL NGSVPDL+ L L+ELNL
Sbjct: 127 IIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNL 186
Query: 203 GGNDFGPKF-PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
GGN GP+ PSL+ N++++ L+NNS S+IP +K ++L+ D+SSN F G I FL
Sbjct: 187 GGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLL 246
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
SLPS+ L+LA N LS +LP + C++KL +++S NLL GKLPSC S ++ T+
Sbjct: 247 SLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLPSCFSSKK-QTVLLFTF 305
Query: 322 NCLS---GVNTKYQHPYSFCRKEA----LAVKPPVNVKSDDEQSTRVDVGLILGIIGGVV 374
NCLS + KYQ P +FC EA AVK K E+ T +++GL++GII GV+
Sbjct: 306 NCLSINGSPSAKYQRPVTFCENEAKQAVAAVKSDTKDKERKEEDTGIELGLVIGIIIGVI 365
Query: 375 GFVVVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSV------RGSPKPAIDSRRVPQTM 428
V LVLV +R+S++ ++ E + D+++V + K D RRVPQTM
Sbjct: 366 LVSAVLAGLVLVRMRKSRSK---EEPLEANNVDQVTVCSNTTRSTTSKTVPDLRRVPQTM 422
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
RSA IGL P+R FSLEE+EEATNNFD NL GE QLYKG L +G V+V+C+KLKQ+
Sbjct: 423 RSAVIGLSPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQK 478
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-PNTGSTVFLVLEHISNGSLRDYLT 547
+ Q+L Q +E+LSKLRH HLVS+LGHCI TYQDH P GST+F+V E+ISNGSLRDYLT
Sbjct: 479 NSTQNLAQQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLT 538
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
DW+KK++LKWPQRM+I IG RG+QFLHTGVAPGIFGNNL+ EN+LLD+ LT KLSGY+I
Sbjct: 539 DWRKKEVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYSI 598
Query: 608 PLPSKV 613
PLPSK+
Sbjct: 599 PLPSKL 604
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 640 | ||||||
| TAIR|locus:2079339 | 802 | AT3G03770 [Arabidopsis thalian | 0.707 | 0.564 | 0.412 | 1.3e-91 | |
| TAIR|locus:2167326 | 680 | AT5G63410 [Arabidopsis thalian | 0.720 | 0.677 | 0.324 | 5.3e-56 | |
| TAIR|locus:2181017 | 951 | AT5G01950 [Arabidopsis thalian | 0.25 | 0.168 | 0.360 | 8e-37 | |
| TAIR|locus:2120362 | 1249 | GSO1 "GASSHO1" [Arabidopsis th | 0.246 | 0.126 | 0.341 | 3.1e-33 | |
| TAIR|locus:2182870 | 1192 | EMS1 "EXCESS MICROSPOROCYTES1" | 0.275 | 0.147 | 0.333 | 7.5e-33 | |
| TAIR|locus:2005498 | 1196 | BRI1 "BRASSINOSTEROID INSENSIT | 0.276 | 0.147 | 0.363 | 8.5e-33 | |
| TAIR|locus:2019317 | 969 | AT1G29730 [Arabidopsis thalian | 0.248 | 0.164 | 0.359 | 9.6e-33 | |
| TAIR|locus:2156349 | 1252 | GSO2 "GASSHO 2" [Arabidopsis t | 0.246 | 0.126 | 0.333 | 2.5e-32 | |
| TAIR|locus:2009630 | 953 | AT1G53420 [Arabidopsis thalian | 0.248 | 0.166 | 0.363 | 4.1e-32 | |
| TAIR|locus:2084016 | 937 | AT3G53590 [Arabidopsis thalian | 0.276 | 0.188 | 0.328 | 4.9e-32 |
| TAIR|locus:2079339 AT3G03770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 191/463 (41%), Positives = 275/463 (59%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFG 208
SL VL++ N + G +P ++SL L+ + LA+N NG++PDL L FG
Sbjct: 178 SLAVLSLRKNVLNGSLPSSLSSLSGLRVLALANNRFNGALPDLSHLTNLQVLDLEGNSFG 237
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSIL 267
P FP LS +V++IL N RS + + + + QL+ D+S N FVGP + L SLP+I
Sbjct: 238 PLFPRLSNKLVTLILSKNKFRSAVSAEEVSSLYQLQHLDLSYNTFVGPFPTSLMSLPAIT 297
Query: 268 YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG-SNSLNRTVVSTWNCLSG 326
YLN++ N+L+ L N+SC+++L FV++S NLL G LP+C+ S+ +R VV NCL+
Sbjct: 298 YLNISHNKLTGRLSANLSCNSQLMFVDMSSNLLTGSLPTCLKPSSGTSRDVVYASNCLAT 357
Query: 327 VNTKYQHPYSFCRKEALAVKPPVNVKSDDEQSTRVDXXXXXXXXXXXXXXXXXXXXXXXX 386
N Q P SFC EALAV + ++ +V
Sbjct: 358 TNED-QRPVSFCSNEALAV----GILP--QRRNKVSKVGIALGVTASILGVLLLAGALFV 410
Query: 387 XXRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEI 446
RR R + + S+ + K D+R + QTM+ +GLP +R FSLEE+
Sbjct: 411 VLRRLNAKKTVTKSSPRLIRENASMGYTSKLLSDARYISQTMKLGGLGLPAYRTFSLEEL 470
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH 506
E ATNNF+ + +GEGSQGQ+Y+G L DGS V+++CLK+K+ Q+LM H+EL++KLRH
Sbjct: 471 EYATNNFESSAFMGEGSQGQIYRGRLKDGSFVAIRCLKMKKSCSTQNLMHHIELIAKLRH 530
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
RHLVS+LGHC Y D +T S +F V E++ NG LR +++D +L W QR+++ IG
Sbjct: 531 RHLVSVLGHCFECYLDD-STVSRMFFVFEYVPNGELRTWISDGHMGRLLTWEQRISVAIG 589
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609
+G+QFLHTG+ PG++ NNLK +ILLD L AKLS YN+PL
Sbjct: 590 VAKGIQFLHTGIVPGVYDNNLKMTDILLDNNLAAKLSSYNLPL 632
|
|
| TAIR|locus:2167326 AT5G63410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 154/474 (32%), Positives = 235/474 (49%)
Query: 148 WSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVXXXXXXXXXXD 206
+++ + +S F ++ LK+L+ + LA + G +P+ L RL
Sbjct: 93 FAISNVTLSDGFSIESFVTTLSRLKSLRVLTLASLGIWGRLPEKLHRLSSLEYLDLSNNF 152
Query: 207 -FGPKFPSLSKNIVSVILR--NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263
FG P LS + R +N +PS ++ LK SN G + S L SL
Sbjct: 153 LFGSVPPKLSTMVKLETFRFDHNFFNGTLPSWFDSYWYLKVLSFKSNKLSGELHSSLLSL 212
Query: 264 PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323
+I Y++L N LS +LP ++ C +KL F++IS N L GKLP C+ S + + NC
Sbjct: 213 STIEYIDLRANSLSGSLPDDLKCGSKLWFIDISDNKLTGKLPRCLSSKQ-DIALRFNGNC 271
Query: 324 LSGVNTKYQHPYSFCRKEA-LAVKPPVNVKSD--DEQSTRVDXXXXXXXXXXXXXXXXXX 380
LS K QHP SFC KE A K +++ +E R
Sbjct: 272 LS--LEKQQHPESFCVKEVRAAAKAEAKAEAEAANESGKRKWKKGALIGLIVGISMSVLV 329
Query: 381 XXXXXXXXRRSKTTGAGDDKYERSVADKMSVRG-SPKPAIDSRRVPQTMRSAAIGLPPFR 439
R K + +V D G S + ++R + +T + + LP R
Sbjct: 330 LVCCVFILLRRKGV-TKKHVHHNTVQDNHPTTGFSSEILSNARYISETSKFGSEDLPVCR 388
Query: 440 GFSLEEIEEATNNFDPTNLIGEGS-QGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV 498
FSLEEI +AT NFD T ++GE S G LYKG L +G++V+++CL +++ ++L +
Sbjct: 389 QFSLEEIVKATKNFDKTMILGESSLYGTLYKGNLENGTKVAIRCLPSSKKYSIRNLKLRL 448
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+LL+KLRH +LV +LGHCI + VFL+ E+I NG+ + L+D + W
Sbjct: 449 DLLAKLRHPNLVCLLGHCIDCGGKDDYSVEKVFLIYEYIPNGNFQSCLSDNSSGKGMNWS 508
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612
+R+ ++ G + V FLHTGV PG F N LKT N+LL++ AKLS Y + + S+
Sbjct: 509 ERLNVLTGVAKAVHFLHTGVIPGFFSNRLKTNNVLLNQHRFAKLSDYGLSIVSE 562
|
|
| TAIR|locus:2181017 AT5G01950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 8.0e-37, Sum P(2) = 8.0e-37
Identities = 61/169 (36%), Positives = 102/169 (60%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV 498
RGFS +E+ EAT++F + L+G G G++Y+G L+D + ++K + + +
Sbjct: 612 RGFSFKELAEATDDFSSSTLVGRGGYGKVYRGVLSDNTVAAIKRADEGSLQGEKEFLNEI 671
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
ELLS+L HR+LVS++G+C + S LV E +SNG+LRD+L+ K K+ L +
Sbjct: 672 ELLSRLHHRNLVSLIGYC--------DEESEQMLVYEFMSNGTLRDWLSA-KGKESLSFG 722
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
R+ + +GA +G+ +LHT P +F ++K NILLD AK++ + +
Sbjct: 723 MRIRVALGAAKGILYLHTEANPPVFHRDIKASNILLDPNFNAKVADFGL 771
|
|
| TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 257 (95.5 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 58/170 (34%), Positives = 96/170 (56%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLP-QSLMQHVELLS 502
E+I EAT+N +IG G G++YK L +G V+VK + K + +S + V+ L
Sbjct: 942 EDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLG 1001
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD-----WKKKDMLKW 557
++RHRHLV ++G+C + G + L+ E++ NGS+ D+L + KKK +L W
Sbjct: 1002 RIRHRHLVKLMGYC-----SSKSEGLNL-LIYEYMKNGSIWDWLHEDKPVLEKKKKLLDW 1055
Query: 558 PQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
R+ I +G +GV++LH P I ++K+ N+LLD + A L + +
Sbjct: 1056 EARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGL 1105
|
|
| TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 245 (91.3 bits), Expect = 7.5e-33, Sum P(3) = 7.5e-33
Identities = 62/186 (33%), Positives = 98/186 (52%)
Query: 423 RVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKC 482
R P ++ A P + L +I EAT++F N+IG+G G +YK L V+VK
Sbjct: 888 REPLSINIAMFEQPLLK-VRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKK 946
Query: 483 LKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
L + + M +E L K++H +LVS+LG+C + + LV E++ NGSL
Sbjct: 947 LSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEK--------LLVYEYMVNGSL 998
Query: 543 RDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
+L + ++L W +R+ I +GA RG+ FLH G P I ++K NILLD K
Sbjct: 999 DHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPK 1058
Query: 602 LSGYNI 607
++ + +
Sbjct: 1059 VADFGL 1064
|
|
| TAIR|locus:2005498 BRI1 "BRASSINOSTEROID INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 276 (102.2 bits), Expect = 8.5e-33, Sum P(2) = 8.5e-33
Identities = 68/187 (36%), Positives = 99/187 (52%)
Query: 437 PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ 496
P R + ++ +ATN F +LIG G G +YK L DGS V++K L + M
Sbjct: 867 PLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMA 926
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-L 555
+E + K++HR+LV +LG+C G LV E + GSL D L D KK + L
Sbjct: 927 EMETIGKIKHRNLVPLLGYC--------KVGDERLLVYEFMKYGSLEDVLHDPKKAGVKL 978
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP-LPSKVR 614
W R I IG+ RG+ FLH +P I ++K+ N+LLD+ L A++S + + L S +
Sbjct: 979 NWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMD 1038
Query: 615 NTLSFHT 621
LS T
Sbjct: 1039 THLSVST 1045
|
|
| TAIR|locus:2019317 AT1G29730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 261 (96.9 bits), Expect = 9.6e-33, Sum P(2) = 9.6e-33
Identities = 60/167 (35%), Positives = 92/167 (55%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVEL 500
FSL +++ ATN+FDP N IGEG G +YKG L DG+ ++VK L K + + + +
Sbjct: 628 FSLRQLKVATNDFDPLNKIGEGGFGSVYKGRLPDGTLIAVKKLSSKSHQGNKEFVNEIGM 687
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
++ L+H +LV + G C+ Q + LV E++ N L D L + L+W R
Sbjct: 688 IACLQHPNLVKLYGCCVEKNQ--------LLLVYEYLENNCLSDALFAGRSCLKLEWGTR 739
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I +G RG+ FLH A I ++K N+LLDK L +K+S + +
Sbjct: 740 HKICLGIARGLAFLHEDSAVKIIHRDIKGTNVLLDKDLNSKISDFGL 786
|
|
| TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 247 (92.0 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 56/168 (33%), Positives = 97/168 (57%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLP-QSLMQHVELLS 502
++I EAT+ + +IG G G++YK L +G ++VK + K + +S + V+ L
Sbjct: 939 DDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLG 998
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL---TDWKKKDMLKWPQ 559
+RHRHLV ++G+C + D N L+ E+++NGS+ D+L + KKK++L W
Sbjct: 999 TIRHRHLVKLMGYCS-SKADGLN-----LLIYEYMANGSVWDWLHANENTKKKEVLGWET 1052
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
R+ I +G +GV++LH P I ++K+ N+LLD + A L + +
Sbjct: 1053 RLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGL 1100
|
|
| TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 258 (95.9 bits), Expect = 4.1e-32, Sum P(2) = 4.1e-32
Identities = 61/168 (36%), Positives = 89/168 (52%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVEL 500
FSL +I+ ATNNFD N IGEG G +YKG L DG+ ++VK L + + + + +
Sbjct: 612 FSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGM 671
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQ 559
+S L H +LV + G C+ G + LV E + N SL L ++ + L WP
Sbjct: 672 ISALHHPNLVKLYGCCV--------EGGQLLLVYEFVENNSLARALFGPQETQLRLDWPT 723
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
R I IG RG+ +LH I ++K N+LLDK L K+S + +
Sbjct: 724 RRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGL 771
|
|
| TAIR|locus:2084016 AT3G53590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 272 (100.8 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 62/189 (32%), Positives = 110/189 (58%)
Query: 419 IDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRV 478
+ +RV +T+ G+ + FS E+ +ATN FD + LIG GS G++YKG L++ + V
Sbjct: 583 LTKKRVFRTISREIKGV---KKFSFVELSDATNGFDSSTLIGRGSYGKVYKGILSNKTEV 639
Query: 479 SVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHIS 538
++K + + + ++LLS+L HR+LVS++G+ + G + LV E++
Sbjct: 640 AIKRGEETSLQSEKEFLNEIDLLSRLHHRNLVSLIGYS-------SDIGEQM-LVYEYMP 691
Query: 539 NGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598
NG++RD+L+ D L + R + +G+ +G+ +LHT P + ++KT NILLD L
Sbjct: 692 NGNVRDWLSA-NAADTLSFSMRSHVALGSAKGILYLHTEANPPVIHRDIKTSNILLDCQL 750
Query: 599 TAKLSGYNI 607
AK++ + +
Sbjct: 751 HAKVADFGL 759
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9M9S4 | Y1143_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5260 | 0.9203 | 0.8090 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_Genewise1_v1.C_290164 | hypothetical protein (745 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 640 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-24 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-19 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-17 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-17 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-17 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 9e-16 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-14 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 8e-14 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-13 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 7e-13 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 8e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-11 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-11 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 7e-10 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 8e-10 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-09 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-08 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-08 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 3e-08 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 1e-07 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-07 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 2e-07 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 3e-07 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-07 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-07 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-07 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 8e-07 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-06 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-06 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 4e-06 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 5e-06 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-06 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 7e-06 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 7e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-05 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 1e-05 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 1e-05 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-05 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-05 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 3e-05 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-05 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 3e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-05 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 4e-05 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 5e-05 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 5e-05 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 5e-05 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 5e-05 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 6e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 6e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 6e-05 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 7e-05 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 7e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 9e-05 | |
| PLN03210 | 1153 | PLN03210, PLN03210, Resistant to P | 9e-05 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-04 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 1e-04 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 1e-04 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 1e-04 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 1e-04 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-04 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 1e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-04 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 2e-04 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-04 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 5e-04 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 5e-04 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 6e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 6e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-04 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 8e-04 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 8e-04 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 8e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 9e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 0.001 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 0.001 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 0.001 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 0.001 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 0.002 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 0.002 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 0.002 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 0.002 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 0.002 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 0.003 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 0.003 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 0.003 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-24
Identities = 122/483 (25%), Positives = 201/483 (41%), Gaps = 72/483 (14%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L +L+ + L G LPS+ + + L+IS+N + G I + +L+ + L
Sbjct: 400 LGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFG----PKFPSLSKNIVSVILRNNSLRSEIPSG 235
A N G +PD LE L+L N F K SLS+ ++ + L N L EIP
Sbjct: 460 ARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSE-LMQLKLSENKLSGEIPDE 518
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
L + +L D+S N G I + +P + L+L+ NQLS +P N+ L V I
Sbjct: 519 LSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNI 578
Query: 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVKPPVNVKSDD 355
SHN L G LPS ++N + V+ L G +T + P V+
Sbjct: 579 SHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDT------------TSGLPPCKRVRKTP 626
Query: 356 EQSTRVDVGLILGIIGGVVGFVVVF--GLLVLVVIRRSKTTGAGDDKYERSVADKMSVRG 413
+ L ++ +V F VF G L + R G + ++
Sbjct: 627 SWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQF------------ 674
Query: 414 SPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKG-FL 472
DS+ +S ++ +I + N+I G +G YKG +
Sbjct: 675 -----FDSK----VSKS----------ITINDILSSLKE---ENVISRGKKGASYKGKSI 712
Query: 473 TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532
+G + VK + +P S + + KL+H ++V ++G C G+ +L
Sbjct: 713 KNGMQFVVKEIN-DVNSIPSSEIAD---MGKLQHPNIVKLIGLC------RSEKGA--YL 760
Query: 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592
+ E+I +L + L + L W +R I IG + ++FLH +P + NL E I
Sbjct: 761 IHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKI 814
Query: 593 LLD 595
++D
Sbjct: 815 IID 817
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 4e-19
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 28/210 (13%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
S+LKVL L L G +P+ + SLE L ++SN + G+IP E+ +K+LK I L N
Sbjct: 164 SSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNN 223
Query: 184 LNGSVP-DLQRLVLLEELNLGGNDF-GPKFPSLS-------------------------- 215
L+G +P ++ L L L+L N+ GP SL
Sbjct: 224 LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSL 283
Query: 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQ 275
+ ++S+ L +NSL EIP + L+ + SNNF G I L SLP + L L N+
Sbjct: 284 QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNK 343
Query: 276 LSEALPVNISCSAKLNFVEISHNLLIGKLP 305
S +P N+ L +++S N L G++P
Sbjct: 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIP 373
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 2e-18
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHC 516
+GEG G +Y G +V++K +K + L + L++ +E+L KL H ++V + G
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ ++LV+E+ GSL+D L + + K L + + I++ G+++LH+
Sbjct: 61 E--------DENHLYLVMEYCEGGSLKDLLKENEGK--LSEDEILRILLQILEGLEYLHS 110
Query: 577 GVAPGIFGNNLKTENILLDKA-LTAKLSGYNI 607
GI +LK ENILLD KL+ + +
Sbjct: 111 N---GIIHRDLKPENILLDSDNGKVKLADFGL 139
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 87.6 bits (217), Expect = 8e-18
Identities = 96/346 (27%), Positives = 151/346 (43%), Gaps = 43/346 (12%)
Query: 14 FLVIFMILVPVSIGQLTPSETRILFQVQKLLEYP-EVLQGWTDWTNFCYLPSSSSLKIVC 72
+L+ + + ++ L E +L + + P + L W + C I C
Sbjct: 11 YLIFMLFFLFLNFSMLHAEELELLLSFKSSINDPLKYLSNWNSSADVC-----LWQGITC 65
Query: 73 TN-SRVTELTV----IGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILT------ 121
N SRV + + I K S A P + S LS D F T +
Sbjct: 66 NNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNL 125
Query: 122 ------------KLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
+ NL+ L L + L G +P+ I F SL+VL++ N + G+IP +T
Sbjct: 126 SNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLT 185
Query: 170 SLKNLKSIVLADNLLNGSVP-DLQRLVLLEELNLGGNDFGPKFPSLSKNIVS---VILRN 225
+L +L+ + LA N L G +P +L ++ L+ + LG N+ + P + S + L
Sbjct: 186 NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVY 245
Query: 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285
N+L IPS L N L+ + N GPI +FSL ++ L+L+ N LS +P +
Sbjct: 246 NNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV- 304
Query: 286 CSAKLNFVEISH---NLLIGKLPSCIGSNSLNR-TVVSTW-NCLSG 326
+L +EI H N GK+P + SL R V+ W N SG
Sbjct: 305 --IQLQNLEILHLFSNNFTGKIP--VALTSLPRLQVLQLWSNKFSG 346
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 86.8 bits (215), Expect = 1e-17
Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 11/242 (4%)
Query: 93 PKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEV 152
P F LS N ++ +L NL++L L S G +P + L+V
Sbjct: 277 PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQV 336
Query: 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-------LQRLVLLEELNLGGN 205
L + SN GEIP + NL + L+ N L G +P+ L +L+L +L G
Sbjct: 337 LQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSN-SLEGE 395
Query: 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS 265
PK +++ V L++NS E+PS + DIS+NN G I S + +PS
Sbjct: 396 I--PKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS 453
Query: 266 ILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325
+ L+LA N+ LP + S +L +++S N G +P +GS S + + N LS
Sbjct: 454 LQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLS 512
Query: 326 GV 327
G
Sbjct: 513 GE 514
|
Length = 968 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 1e-17
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G++YKG L V+VK LK + ++ ++ KL H ++V +
Sbjct: 7 LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKL 66
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C ++ P +++V+E++ G L YL K + L ++ + RG++
Sbjct: 67 LGVCT---EEEP-----LYIVMEYMEGGDLLSYLR--KNRPKLSLSDLLSFALQIARGME 116
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L + +L N L+ + L K+S
Sbjct: 117 YLESK---NFIHRDLAARNCLVGENLVVKIS 144
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 5e-17
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G++YKG L V+VK LK + ++ ++ KL H ++V +
Sbjct: 7 LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKL 66
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C ++ P + +V+E++ G L DYL + L ++ + RG++
Sbjct: 67 LGVCT---EEEP-----LMIVMEYMPGGDLLDYLRK-NRPKELSLSDLLSFALQIARGME 117
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L + +L N L+ + L K+S
Sbjct: 118 YLESK---NFIHRDLAARNCLVGENLVVKIS 145
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 9e-16
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 457 NLIGEGSQGQLYKGFLTDGS----RVSVKCLKL----KQRHLPQSLMQHVELLSKLRHRH 508
+GEG+ G++YKG L V+VK LK ++R + ++ ++ KL H +
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER---KDFLKEARVMKKLGHPN 57
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL------TDWKKKDMLKWPQRMA 562
+V +LG C ++LVLE++ G L DYL +K L ++
Sbjct: 58 VVRLLGVCT--------EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
I +G+++L + +L N L+ + L K+S +
Sbjct: 110 FAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDF 149
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 73.3 bits (181), Expect = 2e-14
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G++YKG L +V+VK LK + ++ ++ KL H ++V +
Sbjct: 7 LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C Q P +++V E++ G L D+L K + L + + + +G++
Sbjct: 67 LGVCT---QGEP-----LYIVTEYMPGGDLLDFLR--KHGEKLTLKDLLQMALQIAKGME 116
Query: 573 FLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+L + N L N L+ + L K+S
Sbjct: 117 YLES--------KNFVHRDLAARNCLVTENLVVKIS 144
|
Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 71.4 bits (176), Expect = 8e-14
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 457 NLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQ--SLMQHVELLSKLRHRHLVSIL 513
L+G GS G +Y D G ++VK ++L + +L + + +LS L+H ++V
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR---- 569
G ++ N + LE++S GSL L KK L +I TR
Sbjct: 66 GSERDEEKNTLN------IFLEYVSGGSLSSLL---KKFGKL----PEPVIRKYTRQILE 112
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+ +LH + GI ++K NIL+D KL+
Sbjct: 113 GLAYLH---SNGIVHRDIKGANILVDSDGVVKLA 143
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 4e-13
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 23/153 (15%)
Query: 457 NLIGEGSQGQLYKGF-LTDGSRVSVKCLKL---KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+LIG G+ G +YKG L G V++K + L K+ L +S+MQ ++LL L+H ++V
Sbjct: 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEAL-KSIMQEIDLLKNLKHPNIV-- 62
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRG 570
Y T +++++LE+ NGSLR + KK P+ + + +G
Sbjct: 63 ------KYIGSIETSDSLYIILEYAENGSLRQII---KKFGPF--PESLVAVYVYQVLQG 111
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +LH G+ ++K NIL K KL+
Sbjct: 112 LAYLHE---QGVIHRDIKAANILTTKDGVVKLA 141
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 7e-13
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
+G GS G +YK G V+VK LK + Q+ + + +L +L H ++V ++
Sbjct: 7 LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID- 65
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
++D + ++LV+E+ G L DYL+ L + I + RG+++LH
Sbjct: 66 ---AFEDKDH----LYLVMEYCEGGDLFDYLSRGGP---LSEDEAKKIALQILRGLEYLH 115
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLS 603
+ GI +LK ENILLD+ K++
Sbjct: 116 ---SNGIIHRDLKPENILLDENGVVKIA 140
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 68.3 bits (168), Expect = 8e-13
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 453 FDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLV 510
++ +GEGS G++Y G V++K +K K + + +++ +++L KL+H ++V
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ ++LV+E+ G L D L KK+ L + +
Sbjct: 61 RLYDVFE--------DEDKLYLVMEYCEGGDLFDLL---KKRGRLSEDEARFYLRQILSA 109
Query: 571 VQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+++LH LK ENILLD+ KL+
Sbjct: 110 LEYLH--------SKGIVHRDLKPENILLDEDGHVKLA 139
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 129 LSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSV 188
L L + GL G +P+ I++ L+ +N+S N I G IP + S+ +L+ + L+ N NGS+
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 189 PD-LQRLVLLEELNLGGNDFGPKFPS 213
P+ L +L L LNL GN + P+
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 5e-11
Identities = 56/247 (22%), Positives = 96/247 (38%), Gaps = 20/247 (8%)
Query: 73 TNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLV 132
+ S ++ L N + + + L +L+NL L L
Sbjct: 76 SPSGISSLDGSENLLNL-----------LPLPSLDLNLNRLRSNISELLELTNLTSLDLD 124
Query: 133 SLGLWGPLPSKINRFWS-LEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL 191
+ + +P I S L+ L++S N +P + +L NLK++ L+ N L+ L
Sbjct: 125 NNNIT-DIPPLIGLLKSNLKELDLSDN-KIESLPSPLRNLPNLKNLDLSFNDLSDLPKLL 182
Query: 192 QRLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISS 249
L L L+L GN P L + + L NNS+ + S L N L ++S+
Sbjct: 183 SNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIE-LLSSLSNLKNLSGLELSN 241
Query: 250 NNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309
N + +L ++ L+L+ NQ+S + L +++S N L LP
Sbjct: 242 NKLEDLP-ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298
Query: 310 SNSLNRT 316
L
Sbjct: 299 LLLLLEL 305
|
Length = 394 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 7e-10
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS 511
F+ IG+G G++YK G V++K +KL+ + + ++ +++L K +H ++V
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
G +Y +++V+E S GSL+D L + L Q + +G+
Sbjct: 62 YYG----SYLKK----DELWIVMEFCSGGSLKDLLKSTNQT--LTESQIAYVCKELLKGL 111
Query: 572 QFLHTGVAPGIFGNNLKTENILL 594
++LH + GI ++K NILL
Sbjct: 112 EYLH---SNGIIHRDIKAANILL 131
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 8e-10
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 29/177 (16%)
Query: 454 DPTNL------IGEGSQGQLYKGFLT-DGSRVSVKCLKL-KQRHLPQSLMQHVELLSKLR 505
DP L IGEG+ G++YK G V++K ++L KQ + ++ + ++ +
Sbjct: 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQN--KELIINEILIMKDCK 73
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H ++V L G +++V+E++ GSL D + M + ++A +
Sbjct: 74 HPNIVDYYD-SYLV-------GDELWVVMEYMDGGSLTD-IITQNFVRMNE--PQIAYVC 122
Query: 566 GAT-RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKV--RNTL 617
+G+++LH+ + ++K++NILL K + KL+ G+ L + RN++
Sbjct: 123 REVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSV 176
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G G + G G +V+VKCLK Q+ + +++ LRH +LV +LG +
Sbjct: 13 TIGKGEFGDVMLG-DYRGQKVAVKCLKDDSTAA-QAFLAEASVMTTLRHPNLVQLLGVVL 70
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
G+ +++V E+++ GSL DYL + + ++ Q++ + G+++L
Sbjct: 71 --------QGNPLYIVTEYMAKGSLVDYLRS-RGRAVITLAQQLGFALDVCEGMEYLE-- 119
Query: 578 VAPGIFGNNLKTENILLDKALTAKLS 603
+L N+L+ + L AK+S
Sbjct: 120 -EKNFVHRDLAARNVLVSEDLVAKVS 144
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 2e-08
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSL----MQHVELLSKLRHRHLVSIL 513
L+G+G+ G+++KG L D + V+VK K LPQ L + +L + H ++V ++
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCK---EDLPQELKIKFLSEARILKQYDHPNIVKLI 58
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G C Q P +++V+E + G +L KKKD LK Q + + A G+ +
Sbjct: 59 GVCT---QRQP-----IYIVMELVPGGDFLSFLR--KKKDELKTKQLVKFALDAAAGMAY 108
Query: 574 LHT 576
L +
Sbjct: 109 LES 111
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVK-CLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
IG+G+ G +YKG L + V+VK C L + +Q E+L + H ++V ++G C
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
+ Q P +++V+E + GSL +L KKK+ L + + + + A G+++L
Sbjct: 62 V---QKQP-----IYIVMELVPGGSLLTFLR--KKKNRLTVKKLLQMSLDAAAGMEYL 109
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 30/157 (19%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKL------KQRHLPQSLMQHVELLSKLRHRHLV 510
L+G GS G +Y+G L DG +VK + L Q + Q L Q + LLSKL+H ++V
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQ-LEQEIALLSKLQHPNIV 65
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR- 569
LG +++ LE + GSL L KK P I TR
Sbjct: 66 QYLG--------TEREEDNLYIFLELVPGGSLAKLL---KKYGSFPEPV----IRLYTRQ 110
Query: 570 ---GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+++LH ++K NIL+D KL+
Sbjct: 111 ILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLA 144
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKLR---H 506
++ IGEG+ G +YK L G V++K ++ L + +P S ++ + LL +L H
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD--------WKKKDMLKWP 558
++V +L C + + LV EH+ L YL+ KD+++
Sbjct: 61 PNIVRLLDVC-HGPRTD--RELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMR-- 114
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
Q + RGV FLH+ I +LK +NIL+ K+
Sbjct: 115 QLL-------RGVDFLHSHR---IVHRDLKPQNILVTSDGQVKI 148
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G++++G + RV++K LK Q + V+ L +LRH+HL+S+ C
Sbjct: 14 LGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-- 71
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG----ATRGVQFL 574
+ G V+++ E + GSL +L + + +A +I G+ +L
Sbjct: 72 ------SVGEPVYIITELMEKGSLLAFLRSPEGQV-----LPVASLIDMACQVAEGMAYL 120
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
+L NIL+ + L K++ +
Sbjct: 121 E---EQNSIHRDLAARNILVGEDLVCKVADF 148
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 31/165 (18%)
Query: 459 IGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVS 511
+GEG+ G++YKG LT S SV LK+ P Q Q EL+S L+H ++V
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-------------TDWKKKDMLKWP 558
+LG C ++ P ++ E++++G L ++L D K L
Sbjct: 73 LLGVCT---KEQPTC-----MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS 124
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ I I G+++L + +L N L+ + LT K+S
Sbjct: 125 DFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKIS 166
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 457 NLIGEGSQGQLYKGFLTD-------GSRVSVKCLKLKQRHLPQS-LMQHVELLSKLRHRH 508
N +G G+ G++Y+G TD RV+VK L+ + ++ L+S H +
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+V +LG C+L ++++E + G L YL D +
Sbjct: 61 IVKLLGVCLLN--------EPQYIIMELMEGGDLLSYLRDARV 95
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 29/163 (17%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKL----------KQRHLPQSLMQHVELLSKLRH 506
LIG+G+ G++Y +T G ++VK ++L +Q+ + ++L +E L L H
Sbjct: 8 LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWPQRMAII 564
++V LG ++ S + LE++ GS+ L + + + ++++ +
Sbjct: 68 LNIVQYLG-----FETTEEYLS---IFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVL- 118
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +LH+ GI +LK +N+L+D K+S + I
Sbjct: 119 ----EGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGI 154
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 3e-07
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G ++V++K LK +P++ +Q +++ KLRH LV +
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLK-PGTMMPEAFLQEAQIMKKLRHDKLVPLYA---- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E + GSL D+L + K LK PQ + + G+ ++
Sbjct: 69 VVSEEP-----IYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIER-- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L K++ + +
Sbjct: 121 -MNYIHRDLRAANILVGDNLVCKIADFGL 148
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 4e-07
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 69 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 121 -MNYVHRDLRAANILVGENLVCKVADFGL 148
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 52.1 bits (123), Expect = 5e-07
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRH 508
++ +GEGS G++Y D V++K L K + + ++ +++L+ L H
Sbjct: 1 SYRILRKLGEGSFGEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
I+ D +++LV+E++ GSL D L +K L + + I+
Sbjct: 59 -------NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQIL 111
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDK 596
+++LH+ GI ++K ENILLD+
Sbjct: 112 SALEYLHSK---GIIHRDIKPENILLDR 136
|
Length = 384 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 8e-07
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G ++V+VK LK P+S ++ +++ KLRH LV +
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYA---- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L D + + LK P + + G+ ++
Sbjct: 69 VVSEEP-----IYIVTEYMSKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIER-- 120
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L++ NIL+ L K++ + +
Sbjct: 121 -MNYIHRDLRSANILVGDGLVCKIADFGL 148
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 30/190 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHV----ELLSKL- 504
++F +IGEGS + ++K L K++ + + +++V E+L++L
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILD-KRQLIKEKKVKYVKIEKEVLTRLN 59
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++ + T+QD N ++ VLE+ NG L Y+ + D A I
Sbjct: 60 GHPGIIKLYY----TFQDEEN----LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEI 111
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL---------SGYNIPLPSKVRN 615
+ A +++LH + GI +LK ENILLDK + K+ + P +K
Sbjct: 112 LLA---LEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDA 165
Query: 616 TLSFHTDRSS 625
T +
Sbjct: 166 TNIDSQIEKN 175
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 36/149 (24%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IGEG G + +G T G +V+VK +K Q+ ++ +++KL H++LV +LG ++
Sbjct: 14 IGEGEFGAVLQGEYT-GQKVAVKNIKCDVT--AQAFLEETAVMTKLHHKNLVRLLG--VI 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ +++V+E +S G+L ++L + + ++ Q + + G+++L +
Sbjct: 69 LHNG-------LYIVMELMSKGNLVNFLRT-RGRALVSVIQLLQFSLDVAEGMEYLES-- 118
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +L NIL+ + AK+S + +
Sbjct: 119 -KKLVHRDLAARNILVSEDGVAKVSDFGL 146
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 459 IGEGSQGQLYKGFLT------DGSRVSVKCLK-LKQRHLPQSLMQHVELLSKLRHRHLVS 511
+GEG+ G+++ G D V+VK LK + + ELL+ +H ++V
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
G C G +V E++ +G L +L
Sbjct: 73 FYGVCT--------EGDPPIMVFEYMEHGDLNKFL 99
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 457 NLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSIL 513
N IG G+ G++Y L G ++VK ++++ + + +++L L+H +LV
Sbjct: 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G + H V++ +E+ S G+L + L + D + + + G+ +
Sbjct: 66 G-----VEVHREK---VYIFMEYCSGGTLEELLEHGRILDE-HVIRVYTLQL--LEGLAY 114
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLS 603
LH+ GI ++K NI LD KL
Sbjct: 115 LHSH---GIVHRDIKPANIFLDHNGVIKLG 141
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 5e-06
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKL-R 505
+ T F+ +IGEG+ G++YK G V++K + + + + + + +L K
Sbjct: 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYSN 61
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--- 562
H ++ + G ++ P ++LV+E GS+ D + K + K +R+
Sbjct: 62 HPNIATFYG--AFIKKNPPGNDDQLWLVMELCGGGSVTDLV-----KGLRKKGKRLKEEW 114
Query: 563 ---IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
I+ RG+ +LH + ++K +NILL K KL
Sbjct: 115 IAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKL 154
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 33/150 (22%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V++K LK + P++ + L+ +L+H LV + + ++
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLK-QGSMSPEAFLAEANLMKQLQHPRLVRL--YAVV 70
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T + ++++ E++ NGSL D+L T K L + + + G+ F+
Sbjct: 71 TQE-------PIYIITEYMENGSLVDFLKTPEGIK--LTINKLIDMAAQIAEGMAFIE-- 119
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 120 -RKNYIHRDLRAANILVSETLCCKIADFGL 148
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 7e-06
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 27/153 (17%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ GQ+YK G V++K ++++ P + ++ ++LL KLRH ++V +
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRL--K 64
Query: 516 CILTYQDHPNTGSTVFLVLEHIS---NGSLRDY---LTDWKKKDMLKWPQRMAIIIGATR 569
I+T ++++V E++ G L T+ + K +K Q +
Sbjct: 65 EIVT----SKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK--QLL-------E 111
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G+Q+LH+ GI ++K NIL++ KL
Sbjct: 112 GLQYLHSN---GILHRDIKGSNILINNDGVLKL 141
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 7e-06
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 452 NFDPTNLIGEGSQGQ--LYKGFLTDGSRVSVKCLKLKQRHLPQS--LMQHVELLSKLRHR 507
++ P ++G+G+ G+ LY+ D S V K + L + + + + +LS L+H
Sbjct: 1 HYIPIRVLGKGAFGEATLYRR-TEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHP 59
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++++ H + +T+ + +E+ + G+L D + +K + + + +
Sbjct: 60 NIIAYYNHFM--------DDNTLLIEMEYANGGTLYDKIVR-QKGQLFEEEMVLWYLFQI 110
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT 616
V ++H GI ++KT NI L KA KL + I SK+ +
Sbjct: 111 VSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGI---SKILGS 153
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-05
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
L N LR IP+ + L+ ++S N+ G I L S+ S+ L+L+ N + ++P
Sbjct: 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRT 316
++ L + ++ N L G++P+ +G L+R
Sbjct: 485 SLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRA 518
|
Length = 623 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 30/169 (17%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLR---H 506
++P IG G+ G +YK G V++K ++++ + LP S ++ V LL +L H
Sbjct: 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDH 61
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--------KKKDMLKWP 558
++V ++ C + D + V LV EH+ LR YL KD+++
Sbjct: 62 PNIVRLMDVCATSRTDRE---TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMR-- 115
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
Q + RG+ FLH I +LK ENIL+ KL+ + +
Sbjct: 116 QFL-------RGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGL 154
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 434 GLPPFRG--FSLEEIEEATNNFDPTNLIGEGSQGQLYK-GFLTDGSRVSVKCLKLKQRHL 490
GL P+ LE + + T+ ++ IG+G+ G++YK DGS +VK L +
Sbjct: 3 GLFPYNSSMLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILD-PISDV 61
Query: 491 PQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW 549
+ + +L L H ++V G + Y+ G ++LVLE + GS+ + +
Sbjct: 62 DEEIEAEYNILQSLPNHPNVVKFYG---MFYKADKLVGGQLWLVLELCNGGSVTELV--- 115
Query: 550 KKKDMLKWPQRMA------IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
K +L QR+ I+ GA G+Q LH I ++K NILL KL
Sbjct: 116 --KGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLV 170
Query: 604 GYNI 607
+ +
Sbjct: 171 DFGV 174
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 457 NLIGEGSQGQLYKG---FLTD--GSRVSVKCLKLKQRHLPQS-LMQHVELLSKLRHRHLV 510
+GEG G++ L D G +V+VK L +S + +E+L L H ++V
Sbjct: 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G C G ++ L++E++ +GSLRDYL + +D + + + +G
Sbjct: 70 KYKGVC------EKPGGRSLRLIMEYLPSGSLRDYLQ--RHRDQINLKRLLLFSSQICKG 121
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +L + +L NIL++ K+S
Sbjct: 122 MDYLGS---QRYIHRDLAARNILVESEDLVKIS 151
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 29/166 (17%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ-------RHLPQSLMQHVELLSKL 504
+F+ N IG+GS G ++K RV +KQ R + + +L+KL
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYA----MKQIDLSKMNRREREEAIDEARVLAKL 56
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM---LKWPQRM 561
+ I+ Y + + +V+E+ NG L L + + + W
Sbjct: 57 DSSY--------IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVW---- 104
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I G+ LH+ I ++K+ N+ LD K+ +
Sbjct: 105 RFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGV 147
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 459 IGEGSQGQLYKGF--LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVSIL 513
+G G+ G + KG + G V V LKQ H+ + ++ ++++L H +V ++
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW---KKKDMLKWPQRMAIIIGATRG 570
G C G + LV+E G L YL D+ + ++A+ +
Sbjct: 63 GVCK---------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLES 113
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
F+H +L N+LL AK+S
Sbjct: 114 KHFVH---------RDLAARNVLLVNRHQAKIS 137
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G ++V+VK LK P++ +Q +++ KLRH LV + C
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLK-PGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCS- 71
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
++ P +++V E++S GSL D+L + K L+ PQ
Sbjct: 72 --EEEP-----IYIVTEYMSKGSLLDFLKSGEGKK-LRLPQ 104
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 45.9 bits (108), Expect = 3e-05
Identities = 34/150 (22%), Positives = 78/150 (52%), Gaps = 20/150 (13%)
Query: 459 IGEGSQGQLYKGFLTD---GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
IG+G+ G ++ D G V++K + L+++ + ++ + ++ +L++ ++V+ L
Sbjct: 27 IGQGASGTVFTA--IDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFL-- 82
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
D G +F+V+E+++ GSL D +T+ + Q A+ + ++FLH
Sbjct: 83 ------DSFLVGDELFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLH 132
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGY 605
A + ++K++N+LL + KL+ +
Sbjct: 133 ---ANQVIHRDIKSDNVLLGMDGSVKLTDF 159
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260
N G F P S +++ S+ L NS+R IP L + L+ D+S N+F G I L
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 261 FSLPSILYLNLAGNQLSEALP 281
L S+ LNL GN LS +P
Sbjct: 487 GQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 42/167 (25%)
Query: 456 TNLIGEGSQGQLYKGFLTDGSR----VSVKCLKL----KQRHLPQSLMQHVELLSKLRHR 507
+IG G G++ +G L + V++K LK KQR ++ L++
Sbjct: 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR---------LDFLTE---- 55
Query: 508 HLVSILGHCILTYQDHPN---------TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
SI+G DHPN V ++ E++ NGSL +L +
Sbjct: 56 --ASIMGQF-----DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLR--ENDGKFTVG 106
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
Q + ++ G G+++L +L NIL++ L K+S +
Sbjct: 107 QLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDF 150
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 34/148 (22%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V++K + L+Q+ + ++ + ++ + +H ++V+
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVN------ 80
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH
Sbjct: 81 --YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLH-- 132
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ + ++K++NILL + KL+ +
Sbjct: 133 -SNQVIHRDIKSDNILLGMDGSVKLTDF 159
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 69
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++V E+++ GSL DYL + + +L + + +++L
Sbjct: 70 ------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE--- 119
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
A +L N+L+ + AK+S + +
Sbjct: 120 ANNFVHRDLAARNVLVSEDNVAKVSDFGL 148
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 5e-05
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 459 IGEGSQGQ--LYKGFLTD---GSRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G+ LY + G V+VK LK + + + + +L L H ++V
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C G + L++E++ GSLRDYL K L Q + G+
Sbjct: 72 KGCC------SEQGGKGLQLIMEYVPLGSLRDYL----PKHKLNLAQLLLFAQQICEGMA 121
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+LH + +L N+LLD K+ + +
Sbjct: 122 YLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGL 153
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 5e-05
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 453 FDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLV 510
F+ L+G G+ GQ+YKG + G ++K + + + + Q + +L K HR++
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 66
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G I ++ P ++LV+E GS+ D + + K + LK I RG
Sbjct: 67 TYYGAFI--KKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRG 123
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ LH + ++K +N+LL + KL + +
Sbjct: 124 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHL----PQSLMQHVELLSKLRHRHLVSIL 513
IGEG+ G +YK G V++K K+K R P++ ++ ++LL +L H +++ +L
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIK--KIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
+ H VF ++ ++D L + + +G+ F
Sbjct: 65 D--VFR---HKGDLYLVFEFMDTDLYKLIKDRQR------GLPESLIKSYLYQLLQGLAF 113
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKL 602
H + GI +LK EN+L++ KL
Sbjct: 114 CH---SHGILHRDLKPENLLINTEGVLKL 139
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 6e-05
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 31/163 (19%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL-----KQRHLPQSLMQHVELLSKLR 505
++ IG+GS G++Y +DG +K + L K+R + + V++L KL
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKER---EDALNEVKILKKLN 57
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAII 564
H + I+ Y + + +V+E+ G L + KK+ Q +
Sbjct: 58 HPN--------IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWF 109
Query: 565 IGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKL 602
+ +++LH+ +K +NI L KL
Sbjct: 110 VQLCLALKYLHS--------RKILHRDIKPQNIFLTSNGLVKL 144
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 6e-05
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 458 LIGEGSQGQLYKGFLTDGSR----VSVKCLKL----KQRHLPQSLMQHVELLSKLRHRHL 509
++G G G+L +G L S+ V++ L+ KQR + + L + H ++
Sbjct: 12 ILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR---RGFLAEALTLGQFDHSNI 68
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V + G ++T G+T+ +V E++SNG+L +L K + L Q M ++ G
Sbjct: 69 VRLEG--VIT------RGNTMMIVTEYMSNGALDSFLR--KHEGQLVAGQLMGMLPGLAS 118
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610
G+++L G L +L++ L K+SG+ L
Sbjct: 119 GMKYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFR-RLQ 155
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 7e-05
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 27/164 (16%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
+GEG+ G +YK G V++K ++L +P + ++ + LL +L+H ++V +L
Sbjct: 7 LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLL-- 64
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAI-IIGATRGVQF 573
D +T ++LV E+ L+ YL D + + + + ++ RG+ +
Sbjct: 65 ------DVIHTERKLYLVFEYCDM-DLKKYL-DKRPGPLSPNLIKSIMYQLL---RGLAY 113
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLS------GYNIPLPS 611
H+ I +LK +NIL+++ KL+ + IPL +
Sbjct: 114 CHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 7e-05
Identities = 32/150 (21%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ + ++V+VK LK + Q+ ++ L+ L+H LV + + ++
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRL--YAVV 70
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T ++ ++++ E+++ GSL D+L +D K +L P+ + G+ ++
Sbjct: 71 TKEE------PIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER- 121
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ N+L+ ++L K++ + +
Sbjct: 122 --KNYIHRDLRAANVLVSESLMCKIADFGL 149
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 9e-05
Identities = 33/148 (22%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V++K + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVN------ 80
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + + FLH+
Sbjct: 81 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSN 134
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ ++K++NILL + KL+ +
Sbjct: 135 ---QVIHRDIKSDNILLGMDGSVKLTDF 159
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|215633 PLN03210, PLN03210, Resistant to P | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 9e-05
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLA--DNLLNGSVPDLQRLVLLEELNLGGND 206
+LE L +S E+P I L L+ + ++ +NL +P L L LNL G
Sbjct: 658 NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEI--LPTGINLKSLYRLNLSGCS 715
Query: 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLK--NFDQLKQFDISSNNFVGPIQSF--LFS 262
FP +S NI + L ++ E PS L+ N D+L ++ S +Q L +
Sbjct: 716 RLKSFPDISTNISWLDLDETAI-EEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMT 774
Query: 263 L--PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
+ PS+ L L+ LP +I KL +EI + + + LP+ I SL
Sbjct: 775 MLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESL 827
|
syringae 6; Provisional. Length = 1153 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 33/191 (17%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK 503
E E + ++G+G+ G +Y L+ R+++K + + Q L + + L S
Sbjct: 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-TDW----KKKDMLKWP 558
L+HR++V LG + +E + GSL L + W + + +
Sbjct: 62 LKHRNIVQYLGSDS--------ENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFY 113
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----------DKALTAKLSGYNIP 608
+ + G+++LH I ++K +N+L+ D + +L+G N P
Sbjct: 114 TKQIL-----EGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN-P 164
Query: 609 LPSKVRNTLSF 619
TL +
Sbjct: 165 CTETFTGTLQY 175
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 1e-04
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKL---------KQRHLPQSLMQHVELLSKLRHR 507
LIG GS G +Y G + G ++VK ++L ++R + +L + + LL +L+H
Sbjct: 7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V LG + DH N + LE++ GS+ L ++ + +
Sbjct: 67 NIVQYLGSSL--DADHLN------IFLEYVPGGSVAALLNNYGA---FEETLVRNFVRQI 115
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ +LH GI ++K NIL+D K+S + I
Sbjct: 116 LKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGI 152
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 32/148 (21%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V+++ + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ ++K++NILL + KL+ +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDF 160
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 440 GFSLEEIEEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHV 498
L + + F+ ++G G+ GQ+YKG + G ++K + + + + + +
Sbjct: 5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-EEEIKLEI 63
Query: 499 ELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK----KKD 553
+L K HR++ + G I + P ++LV+E GS+ D + + K K+D
Sbjct: 64 NMLKKYSHHRNIATYYGAFI--KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKED 121
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ + R + RG+ LH A + ++K +N+LL + KL + +
Sbjct: 122 WIAYICREIL-----RGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGV 167
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVK-CLKLKQ----RHLPQSLMQHVELLSKLRHRHLVS 511
L+G G G ++KG + +G + + +K Q R Q + H+ + L H ++V
Sbjct: 14 LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVR 73
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA-IIIGATRG 570
+LG C G+++ LV + GSL D++ + +D L PQR+ + +G
Sbjct: 74 LLGIC---------PGASLQLVTQLSPLGSLLDHVR--QHRDSLD-PQRLLNWCVQIAKG 121
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +L + NL NILL +++ + +
Sbjct: 122 MYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGV 155
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G++++G + + V+VK LK P+ + +++ KLRH L+ + C L
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCTL 72
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+++V E + GSL +YL LK PQ
Sbjct: 73 --------EEPIYIVTELMKYGSLLEYLQG-GAGRALKLPQ 104
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 15/150 (10%)
Query: 459 IGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ G +YKG G V++K ++L+ +P + ++ + LL +L+H ++V +
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD- 66
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ Q+ S ++L+ E +S L+ YL K + + + +G+ F H
Sbjct: 67 --VLMQE-----SRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH 118
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGY 605
+ + +LK +N+L+D KL+ +
Sbjct: 119 ---SRRVLHRDLKPQNLLIDNKGVIKLADF 145
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 2e-04
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
++KL +L+ ++L + G +P + SLEVL++S N G IP + L +L+ + L
Sbjct: 438 ISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
Query: 180 ADNLLNGSVP 189
N L+G VP
Sbjct: 498 NGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 457 NLIGEGSQGQLYKGFLTDGSR-----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHR 507
+L+ EG+ G+++ G L D V VK +K Q L L+Q LL L H+
Sbjct: 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTL---LLQESCLLYGLSHQ 68
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ-------- 559
+++ IL CI + P F++ +++ G+L+ +L + + PQ
Sbjct: 69 NILPILHVCIEDG-EPP------FVLYPYMNWGNLKLFLQQCRLGEANN-PQALSTQQLV 120
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
MAI I G+ +LH G+ ++ N ++D+ L K+
Sbjct: 121 HMAIQI--ACGMSYLHK---RGVIHKDIAARNCVIDEELQVKI 158
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 452 NFDPTNLIGEGSQGQLYK-GFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH-RHL 509
+F +G+GS G +YK L+D ++K + L M E + R L
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDL-------GSMSQKEREDAVNEIRIL 53
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM--AIIIGA 567
S+ I++Y++ G+ + +V+E+ G L ++ KKK L P++ I I
Sbjct: 54 ASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKL-IPEQEIWRIFIQL 112
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
RG+Q LH I +LK+ NILL K+ I
Sbjct: 113 LRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGI 149
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 4e-04
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS 511
FD +GEGS G +YK G V++K + +++ Q +++ + +L + ++V
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDL--QEIIKEISILKQCDSPYIVK 62
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
G Y + +++V+E+ GS+ D + K L + AI+ +G+
Sbjct: 63 YYGS----YF----KNTDLWIVMEYCGAGSVSDIMKITNKT--LTEEEIAAILYQTLKGL 112
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
++LH + ++K NILL++ AKL
Sbjct: 113 EYLH---SNKKIHRDIKAGNILLNEEGQAKL 140
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRH 508
NF IGEG+ G +YK G V++K ++L + +P + ++ + LL +L H +
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V +L D +T + ++LV E + + L+ ++ D + P + +
Sbjct: 61 IVKLL--------DVIHTENKLYLVFEFL-HQDLKKFM-DASPLSGIPLPLIKSYLFQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H + + +LK +N+L++ KL+ + +
Sbjct: 111 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGL 146
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 5e-04
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 459 IGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRHLVS 511
+GEG G++ K + V+VK LK + L+ LL ++ H H++
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ G C QD P + L++E+ GSLR +L + +K
Sbjct: 68 LYGACS---QDGP-----LLLIVEYAKYGSLRSFLRESRK 99
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 25/151 (16%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRH 508
F+ N IGEG+ G +Y+ T G V++K +++ +P S ++ + LL LRH +
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67
Query: 509 LVSILGHCILTYQDHPNTGS---TVFLVLEHISN--GSLRDYLTDWKKKDMLKWPQRMAI 563
+V + G ++FLV+E+ SL D + Q +
Sbjct: 68 IVELK---------EVVVGKHLDSIFLVMEYCEQDLASLLDNMP-----TPFSESQVKCL 113
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
++ RG+Q+LH I +LK N+LL
Sbjct: 114 MLQLLRGLQYLHENF---IIHRDLKVSNLLL 141
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 19/114 (16%)
Query: 459 IGEGSQGQLYKG-FLTDGSRVSVK-CLK-LKQRHLPQS---LMQHVELLSKLRHRHLVSI 512
+G G+ G +YKG ++ +G +V + +K L++ P++ ++ +++ + H H+V +
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK----KKDMLKWPQRMA 562
LG C+ S V L+ + + G L DY+ + K + +L W ++A
Sbjct: 75 LGICL---------SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIA 119
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 8e-04
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 143 KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEELN 201
W ++ L + + + G IP +I+ L++L+SI L+ N + G++P L + LE L+
Sbjct: 413 STKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLD 472
Query: 202 LGGNDFGPKFP-SLSK--NIVSVILRNNSLRSEIPSGL 236
L N F P SL + ++ + L NSL +P+ L
Sbjct: 473 LSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 8e-04
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 459 IGEGSQGQLY----KGFLTDGSR--VSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ L + + V+VK LK Q + ELL+ L+H+H+V
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
G C G + +V E++ +G L +L
Sbjct: 73 YGVC--------TEGRPLLMVFEYMRHGDLNRFL 98
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 8e-04
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 30/156 (19%)
Query: 451 NNFDPTNLIGEGSQGQ----LYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHV----ELLS 502
++F+ +G GS G+ +KG G ++K L K + + ++HV +L
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKG---SGKYYALKILS-KAKIVKLKQVEHVLNEKRILQ 56
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
+RH LV++ G ++QD S ++LV+E++ G L +L +K ++P+ +A
Sbjct: 57 SIRHPFLVNLYG----SFQD----DSNLYLVMEYVPGGELFSHL---RKSG--RFPEPVA 103
Query: 563 IIIGA--TRGVQFLHTGVAPGIFGNNLKTENILLDK 596
A +++LH+ I +LK EN+LLD
Sbjct: 104 RFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDS 136
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 459 IGEGSQGQLYKGF---LTDGSR-----VSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+G+G+ +++KG + D V +K L R+ +S + ++S+L H+HLV
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
G C+ G +V E++ GSL YL K + W
Sbjct: 63 LNYGVCV--------CGDESIMVQEYVKFGSLDTYLKKNKNLINISW 101
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 9e-04
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 41/160 (25%)
Query: 458 LIGEGSQGQLYKGFLTDGSR-VSVKCL--KLKQRHLPQSLMQHVELLSKLRHRHLVSILG 514
L+GEGS G + K + + V++K + + + M+ + +L +LRH +LV+++
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67
Query: 515 --------HCILTYQDHPNTGSTVFLVLEHISNG----SLRDYLTDWKKKDMLKWPQRMA 562
+ + + DH TV LE NG +R YL ++
Sbjct: 68 VFRRKKRLYLVFEFVDH-----TVLDDLEKYPNGLDESRVRKYL--FQ------------ 108
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
I+ RG++F H+ I ++K ENIL+ ++ KL
Sbjct: 109 IL----RGIEFCHSH---NIIHRDIKPENILVSQSGVVKL 141
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 480 VKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
KC++ + ++++ +L +L H LV++ ++QD N ++LV++ +
Sbjct: 36 QKCVE---KGSVRNVLNERRILQELNHPFLVNLW----YSFQDEEN----MYLVVDLLLG 84
Query: 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599
G LR +L+ +K Q I +++LH+ GI ++K +NILLD+
Sbjct: 85 GDLRYHLS---QKVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGH 138
Query: 600 AKLSGYNI 607
++ +NI
Sbjct: 139 VHITDFNI 146
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.001
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 39/171 (22%)
Query: 459 IGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK + + + ELL+ L+H H+V
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----------------TDWKKKDMLK 556
G C+ G + +V E++ +G L +L + + ML
Sbjct: 73 YGVCV--------EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLH 124
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
Q++A + F+H +L T N L+ + L K+ + +
Sbjct: 125 IAQQIAAGMVYLASQHFVH---------RDLATRNCLVGENLLVKIGDFGM 166
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
D IGEGS G + + G +V+VK + L+++ + L V ++ +H ++V
Sbjct: 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ ++ G +++V+E + G+L D +T + + Q + + +
Sbjct: 80 EMYSSYLV--------GDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLAVLKA 127
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
+ FLH A G+ ++K+++ILL KLS +
Sbjct: 128 LSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDF 159
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 36/165 (21%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCL-KLKQRHLPQSLMQHVELLSKL 504
N +G G G+++ + V VK L K K +L + +++ KL
Sbjct: 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP------ 558
H+++V +LG C +++LE+ G L+ +L K KD P
Sbjct: 66 SHKNVVRLLGLC--------REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTK 117
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
Q++A+ G+ L +L N L+ K+S
Sbjct: 118 QKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.002
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND 206
+L+ L++S+N + IP L NLK + L+ N L P+ L L L+L GN+
Sbjct: 1 NLKSLDLSNNRL-TVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 207 F 207
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG G G ++ G+ + +V++K ++ + + ++ +++ KL H LV + G C
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-- 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ P + LV E + +G L DYL
Sbjct: 69 -TERSP-----ICLVFEFMEHGCLSDYL 90
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 475 GSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532
G +V+VK LK + H+ L + +E+L L H ++V G C + G+ + L
Sbjct: 33 GEQVAVKSLKPESGGNHI-ADLKKEIEILRNLYHENIVKYKGIC------TEDGGNGIKL 85
Query: 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
++E + +GSL++YL K K LK + A+ I +G+ +L
Sbjct: 86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQI--CKGMDYL 125
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR- 505
+ ++ ++ IG+G+ G+++K +GS+ +VK L + + + +L L
Sbjct: 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILD-PIHDIDEEIEAEYNILKALSD 73
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--- 562
H ++V G + Y+ G ++LVLE + GS+ D + K LK +RM
Sbjct: 74 HPNVVKFYG---MYYKKDVKNGDQLWLVLELCNGGSVTDLV-----KGFLKRGERMEEPI 125
Query: 563 ---IIIGATRGVQFLHTG--VAPGIFGNN--LKTEN--ILLDKALTAKLS 603
I+ A G+Q LH + + GNN L TE L+D ++A+L+
Sbjct: 126 IAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 458 LIGEGSQGQLYKGFLTD--GSRVSVK---CLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
IGEG G +Y+G +++V C + + +Q ++ + H H+V +
Sbjct: 13 CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
+G ++P V++V+E G LR YL K L
Sbjct: 73 IGVI----TENP-----VWIVMELAPLGELRSYLQ--VNKYSLD 105
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-------RHLPQSLMQHVELLSKLRHRHLV 510
IG+GS G + K +DG K L K+ Q L+ V +L +L+H ++V
Sbjct: 8 IGKGSFGTVRKVRRKSDG-----KILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIV 62
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-KDMLKWPQRMAIIIGATR 569
I D N T+++V+E+ G L + KK + ++ I+
Sbjct: 63 RYYDRII----DRSNQ--TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLL 116
Query: 570 GVQFLHTGVAPG--IFGNNLKTENILLDKALTAKL 602
+ H PG + +LK NI LD KL
Sbjct: 117 ALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKL 151
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSR-VSVKCLKLK--QRHLPQSLMQHVELLSKL---R 505
++ IGEG+ G+++K L +G R V++K ++++ + +P S ++ V +L L
Sbjct: 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 62
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA-II 564
H ++V + C ++ D + + LV EH+ L YL K + + + ++
Sbjct: 63 HPNVVRLFDVCTVSRTDRE---TKLTLVFEHVDQ-DLTTYLD--KVPEPGVPTETIKDMM 116
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
RG+ FLH+ + +LK +NIL+ + KL+ + +
Sbjct: 117 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 37/160 (23%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ G +YK G V++K ++L+ +P + ++ + LL +L H ++V +L
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL-- 64
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
D ++ + ++LV E + + L+ Y+ D L P + + +G+ + H
Sbjct: 65 ------DVVHSENKLYLVFEFL-DLDLKKYM-DSSPLTGLDPPLIKSYLYQLLQGIAYCH 116
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLS------GYNIPL 609
+ + +LK +N+L+D+ KL+ + +P+
Sbjct: 117 SH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 458 LIGEGSQGQLYKGFLTDGSR----VSVKCLKL----KQRHLPQSLMQHVELLSKLRHRHL 509
+IG G G++++G L R V++K LK KQR Q + ++ + H ++
Sbjct: 12 VIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQR---QDFLSEASIMGQFSHHNI 68
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ + G + ++ ++ E++ NG+L YL D Q + ++ G
Sbjct: 69 IRLEG-VVTKFKP-------AMIITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAA 118
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+++L +L NIL++ L K+S + +
Sbjct: 119 GMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGL 153
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 640 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.98 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.97 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.97 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.97 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.97 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.97 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.97 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.97 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.97 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.97 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.97 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.97 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.97 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.97 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.97 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.97 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.97 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.97 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.97 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.97 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.96 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.96 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.96 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.96 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.96 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.96 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.96 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.96 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.96 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.96 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.96 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.96 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.96 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.96 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.96 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.96 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.96 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.96 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.96 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.96 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.96 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.96 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.96 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.96 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.96 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.96 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.96 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.96 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.95 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.95 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.95 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.95 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.95 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.95 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.95 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.95 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.95 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.95 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.95 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.95 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.95 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.95 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.95 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.95 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.95 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.95 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.95 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.95 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.95 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.95 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.95 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.95 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.95 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.95 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.95 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.95 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.95 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.95 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.95 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.95 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.95 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.95 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.95 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.95 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.95 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.95 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.95 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.94 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.94 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.94 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.94 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.94 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.94 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.94 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.94 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.94 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.94 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.94 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.94 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.94 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.94 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.94 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.94 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.94 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.94 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.94 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.94 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.94 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.94 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.94 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.94 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.94 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.94 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.94 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.94 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.94 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.94 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.94 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.94 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.93 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.93 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.93 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.93 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.93 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.93 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.93 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.93 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.93 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.93 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.93 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.93 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.93 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.93 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.93 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.93 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.93 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.93 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.93 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.93 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.93 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.93 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.93 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.93 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.93 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.93 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.93 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.93 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.93 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.92 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.92 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.92 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.92 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.92 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.92 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.92 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.92 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.92 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.92 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.92 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.92 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.92 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.92 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.92 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.92 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.92 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.91 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.91 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.91 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.91 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.91 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.91 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.9 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.9 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.9 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.89 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.89 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.89 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.89 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.88 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.88 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.88 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.88 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.88 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.87 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.86 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.86 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.85 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.85 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.85 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.84 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.84 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.84 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.84 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.83 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.82 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.82 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.81 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.81 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.79 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.78 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.77 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.76 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.76 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.75 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.75 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.75 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.74 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.74 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.74 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.74 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.73 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.72 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.71 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.71 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.7 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.7 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.69 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.69 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.68 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.67 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.67 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.65 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.64 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.62 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.6 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.57 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.57 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.53 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.51 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.5 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.49 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.47 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.46 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.46 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.45 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.43 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.42 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.4 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.39 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.3 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.28 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.27 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.19 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.19 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.12 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.12 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.12 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.11 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.1 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.09 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.08 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.06 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.04 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.04 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.0 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.0 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.97 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.97 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.95 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.94 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.91 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.89 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.89 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.88 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.8 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.78 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.69 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.67 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.6 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.51 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.48 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.42 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.4 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.39 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.38 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.36 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.31 | |
| PRK15386 | 426 | type III secretion protein GogB; Provisional | 98.3 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.29 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.29 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.28 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-66 Score=617.44 Aligned_cols=178 Identities=25% Similarity=0.433 Sum_probs=144.2
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
++++++. ..|+..+.||+|+||.||+|+. .++..||||+++.... ...+|++.+++++|||||+++|+|.
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~-- 753 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCR-- 753 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEE--
Confidence 3444443 4577889999999999999995 5789999999874332 2235688999999999999999996
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
.+...|+|||||++|+|.++++. ++|.++.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.
T Consensus 754 ------~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~ 821 (968)
T PLN00113 754 ------SEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE 821 (968)
T ss_pred ------cCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc
Confidence 23457999999999999999952 789999999999999999999766689999999999999999998
Q ss_pred eEEeCCCCCccccCC-------CC-----c-cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVR-------NT-----L-SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~-------~~-----~-~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++. ||.+...... .+ . +.. +.++|||||||++|||+||.
T Consensus 822 ~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~ 875 (968)
T PLN00113 822 PHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGK 875 (968)
T ss_pred eEEE-eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCC
Confidence 8876 6655432111 00 0 334 88999999999999999984
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=368.06 Aligned_cols=195 Identities=39% Similarity=0.673 Sum_probs=172.5
Q ss_pred CCCCCCHHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEE
Q 006570 437 PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516 (640)
Q Consensus 437 ~~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~ 516 (640)
..+.|+++|+..+|++|...+.||+|+||.||+|.+++|..||||++........++|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988754432146699999999999999999999999
Q ss_pred EecccCCCCCCC-eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 517 ILTYQDHPNTGS-TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 517 ~~~~~~~~~~~~-~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
.+ .+ ..+||||||++|+|.++|+..... .++|.+|++||.++|+||+|||..|.++||||||||+|||+|
T Consensus 141 ~e--------~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 141 LE--------GGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred ec--------CCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 72 23 489999999999999999864333 899999999999999999999999988999999999999999
Q ss_pred CCCceEEeCCCCCccccC---------CCCc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKV---------RNTL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~---------~~~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++++||+|||+|+.... ..+. .+. ++|+|||||||+|+||+||.
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr 275 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR 275 (361)
T ss_pred CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC
Confidence 999999999999987654 2221 345 99999999999999999984
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=307.14 Aligned_cols=177 Identities=24% Similarity=0.418 Sum_probs=154.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..+|...+.||+|+||+||+|++ .++.+||||.+... .....+-+..|+.+|+.++|||||.+++++. .
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~--------~ 80 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE--------D 80 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe--------c
Confidence 45788888899999999999995 45889999999765 3345567889999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC------Cce
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA------LTA 600 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~------~~~ 600 (640)
++.+|+|||||.+|||.+|++. .+.+++.....++.|+|.||++||+ .+||||||||.|||++.. -.+
T Consensus 81 ~~~i~lVMEyC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 81 DDFIYLVMEYCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred CCeEEEEEEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceE
Confidence 5679999999999999999975 4579999999999999999999999 699999999999999875 458
Q ss_pred EEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+|+........ ..+ +.|+|+||.|+++||+++|.
T Consensus 155 KIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~ 211 (429)
T KOG0595|consen 155 KIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGK 211 (429)
T ss_pred EecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCC
Confidence 99999999988654321 345 99999999999999999994
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=317.73 Aligned_cols=171 Identities=23% Similarity=0.448 Sum_probs=151.8
Q ss_pred CCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
..+.||+|.||.||.|+++....||+|.++.. ....++|.+|+++|++++|+|||+++|+|. .++.+||||
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~--------~~~piyIVt 280 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCT--------KQEPIYIVT 280 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEe--------cCCceEEEE
Confidence 35789999999999999987779999999865 345688999999999999999999999996 334699999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
|||+.|+|.+||+. .....+...+.+.++.|||+||+||++ +++|||||.++|||++++..+||+|||+|+.....
T Consensus 281 E~m~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EecccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 99999999999986 346678999999999999999999999 79999999999999999999999999999965544
Q ss_pred CCc------------------cCC-CCccceehhhHHHHHHhh
Q 006570 615 NTL------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 615 ~~~------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
.+. ... +.|||||||||+||||+|
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT 399 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFT 399 (468)
T ss_pred ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhc
Confidence 332 334 999999999999999987
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=305.79 Aligned_cols=174 Identities=27% Similarity=0.440 Sum_probs=147.5
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCC--hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL--PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
.+.+|+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.. .....++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~-------~~~~~~iV 118 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTS-------PPGSLCIV 118 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-------CCCceEEE
Confidence 45599999999999999644449999998643222 4689999999999999999999999962 11158999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC-eeccCCCCCceeecCCC-ceEEeCCCCCccc
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG-IFGNNLKTENILLDKAL-TAKLSGYNIPLPS 611 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiHrDlk~~NILl~~~~-~~kl~DfGla~~~ 611 (640)
||||++|+|.++++.. ....+++..+++++.|||+||.|||+ .+ ||||||||+|||++.++ ++||+|||+++..
T Consensus 119 tEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred EEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 9999999999999863 46779999999999999999999999 46 99999999999999997 9999999999766
Q ss_pred cCC---C-----Cc--------c---CC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVR---N-----TL--------S---FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~---~-----~~--------~---~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... . +. . .. +.|+|||||||+||||+||.
T Consensus 195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~ 243 (362)
T KOG0192|consen 195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGE 243 (362)
T ss_pred ccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCC
Confidence 432 1 11 2 23 99999999999999999983
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=321.75 Aligned_cols=179 Identities=23% Similarity=0.364 Sum_probs=155.5
Q ss_pred HhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
.+.+....+.||+|+||+||+|+.. +...||||.++..... .+++|++|++++..++|||||+++|+|.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~---- 559 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR---- 559 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc----
Confidence 3445556789999999999999843 2457999999976554 6789999999999999999999999996
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCC-----------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCC
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-----------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~ 590 (640)
.+++.++|+|||..|||.+||+.... ..+++..+.+.||.|||.||+||-+ ..+|||||..+
T Consensus 560 ----~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATR 632 (774)
T KOG1026|consen 560 ----EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATR 632 (774)
T ss_pred ----cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---Ccccccchhhh
Confidence 56779999999999999999975321 2348899999999999999999998 69999999999
Q ss_pred ceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh
Q 006570 591 NILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 591 NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
|+|+.++..+||+|||+++.+...+++ .++ +++||||||||||||+++
T Consensus 633 NCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFs 700 (774)
T KOG1026|consen 633 NCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFS 700 (774)
T ss_pred hceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhc
Confidence 999999999999999999987665544 344 999999999999999986
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=298.06 Aligned_cols=178 Identities=20% Similarity=0.384 Sum_probs=155.2
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.|+..++||+|.||.||+|+ ..+|+.||+|++..+. .....-..+||.+|++++||||+++.+...+. ..
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~------~~ 190 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK------LS 190 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec------CC
Confidence 456667899999999999999 6789999999998654 44556788999999999999999999998742 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..+|||+|||++ ||.-++.. ....+++.++..|+.|++.||+|+|+ .+|+|||||.+|||||.+|.+||+|||+
T Consensus 191 ~siYlVFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 191 GSIYLVFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred ceEEEEEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccc
Confidence 569999999998 99988863 45679999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++...... ... +..+|+||.||||.||++|+
T Consensus 265 Ar~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gk 317 (560)
T KOG0600|consen 265 ARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGK 317 (560)
T ss_pred eeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCC
Confidence 9987654422 334 99999999999999999985
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=288.98 Aligned_cols=181 Identities=20% Similarity=0.328 Sum_probs=153.9
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
+++.|++. .+.||+|..|+|||++++ +++.+|+|.+... +....+++.+|++++++++||+||.++|.++.
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 55566654 588999999999999964 6889999999543 33456889999999999999999999999974
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
. +..+.|+||||.+|||++++.. .+++++...-+|+.+|++||.|||+. .+||||||||+|||++..|
T Consensus 149 ~-------~~~isI~mEYMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskG 216 (364)
T KOG0581|consen 149 N-------GEEISICMEYMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKG 216 (364)
T ss_pred C-------CceEEeehhhcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCC
Confidence 2 1258999999999999999964 46699999999999999999999964 7999999999999999999
Q ss_pred ceEEeCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++||||||.++.+...... +.. +.++||||||++++|+++|.
T Consensus 217 eVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~Gr 274 (364)
T KOG0581|consen 217 EVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGR 274 (364)
T ss_pred CEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCC
Confidence 9999999999876433211 334 88999999999999999983
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=286.77 Aligned_cols=177 Identities=19% Similarity=0.343 Sum_probs=149.1
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC-------ChHHHHHHHHHHhcCCCcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-------LPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 520 (640)
..+.|.+.+.+|+|+||.|-+|. .++|+.||||+++..... ......+|+++|++++|||||++++++.
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~--- 246 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE--- 246 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee---
Confidence 34567788999999999999998 668999999999764321 1234579999999999999999999985
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--- 597 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--- 597 (640)
..+..|||||||+||+|.+.+.. .+.+.+.....+++|++.|+.|||+ +||+||||||+|||+..+
T Consensus 247 -----~~ds~YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 247 -----VPDSSYMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAED 315 (475)
T ss_pred -----cCCceEEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcc
Confidence 34557999999999999999964 4567788889999999999999999 799999999999999766
Q ss_pred CceEEeCCCCCccccCCCCc------------------cCC--CCccceehhhHHHHHHhhc
Q 006570 598 LTAKLSGYNIPLPSKVRNTL------------------SFH--TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~~------------------~~~--~~~~DvwS~Gvvl~elltG 639 (640)
..+||+|||+|+..+..... +.. ..++|+||+||+||-+++|
T Consensus 316 ~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG 377 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSG 377 (475)
T ss_pred eEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEecc
Confidence 78999999999988533211 222 5589999999999999998
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=275.83 Aligned_cols=176 Identities=16% Similarity=0.234 Sum_probs=149.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.|+....+|+|+||+||+|+. .+|+.||||++.... +...+-..+|+++|++++|+|+|.++.+|. ..
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr--------rk 73 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR--------RK 73 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH--------hc
Confidence 4577788999999999999995 459999999997543 233456789999999999999999998874 45
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|+|||+. ++.+-|.. ....++.....+|+.|+++|+.|+|+ .+||||||||+|||++.++.+||||||+
T Consensus 74 rklhLVFE~~dh-TvL~eLe~--~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 74 RKLHLVFEYCDH-TVLHELER--YPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred ceeEEEeeecch-HHHHHHHh--ccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchh
Confidence 679999999988 55555653 34568899999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ + .+ ++.+||||.||++.||+||.
T Consensus 148 AR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~ 199 (396)
T KOG0593|consen 148 ARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGE 199 (396)
T ss_pred hHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCC
Confidence 9987643221 3 34 99999999999999999994
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=296.26 Aligned_cols=176 Identities=19% Similarity=0.376 Sum_probs=157.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..|...+.||+|+|+.||+++. ..|+.||+|++.+. +....+.+.+||++.++++|||||++++++. +
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE--------D 89 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE--------D 89 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee--------c
Confidence 5688899999999999999995 88999999999753 3456688999999999999999999999884 5
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+++|||.|+|++|+|.++++ .+..+++.++..+.+||+.||.|||+ .+|||||||..|+++++++++||+|||
T Consensus 90 s~nVYivLELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 90 SNNVYIVLELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred CCceEEEEEecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccc
Confidence 678999999999999999996 46789999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc------------------cCCCCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL------------------SFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~------------------~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
+|......+.. .+++..+||||+|||||-|++|.
T Consensus 164 LAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~ 215 (592)
T KOG0575|consen 164 LATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGR 215 (592)
T ss_pred eeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCC
Confidence 99887644221 33399999999999999999984
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=279.65 Aligned_cols=177 Identities=21% Similarity=0.314 Sum_probs=152.5
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||+||.++ .++++.+|+|++++.. ....+....|..+|.+++||.||+++-.+ +
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF--------Q 95 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF--------Q 95 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec--------c
Confidence 3568889999999999999999 4568999999998643 23456789999999999999999997433 4
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+.+.+|+|+||+.||.|+.+|++ ...+++..+..++.+|+.||.|||+ .+||||||||+|||+|++|+++|+||
T Consensus 96 t~~kLylVld~~~GGeLf~hL~~---eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 96 TEEKLYLVLDYLNGGELFYHLQR---EGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred cCCeEEEEEeccCCccHHHHHHh---cCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEecc
Confidence 67789999999999999999964 5678999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +..+|.||+||++|||++|.
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~ 222 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGK 222 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCC
Confidence 999854322111 333 99999999999999999983
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=278.39 Aligned_cols=181 Identities=19% Similarity=0.344 Sum_probs=151.6
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|.+.+.||+|.||+|||+. ..+|..||.|.++-. +.+..++...|+.+|++++|||||++++..+. ++.+
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~------~~~e 93 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI------EDNE 93 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh------ccch
Confidence 45667899999999999998 778999999998743 23345789999999999999999999884431 2334
Q ss_pred eEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCC-CCeeccCCCCCceeecCCCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVA-PGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~-~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
-++||||||..|+|.+.++..+ ..+.+++..+++++.|++.||..+|.... .-|+||||||.||+++.+|.+|++|||
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence 4899999999999999997643 45679999999999999999999998321 238999999999999999999999999
Q ss_pred CCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhh
Q 006570 607 IPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
++++.....+. +.. +.|+||||+||++|||..
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMca 223 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCA 223 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHh
Confidence 99988654322 334 999999999999999974
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=307.35 Aligned_cols=173 Identities=18% Similarity=0.339 Sum_probs=151.2
Q ss_pred CCCCCccccCCccceEEEEeCC----CcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..+.+.||.|.||.||+|+++- ...||||.++... .+.+.+|..|+.+|.+++||||++|.|+.. ..
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT--------ks 702 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT--------KS 702 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe--------cC
Confidence 3567899999999999999642 3579999999764 345678999999999999999999999985 55
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..++||+|||++|+|+.||+. +...+.+.+...+.++||.||.||-+ +++|||||.++|||++.+..+||+|||+
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~--~DGqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhh--cCCceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccc
Confidence 679999999999999999986 34569999999999999999999998 8999999999999999999999999999
Q ss_pred CccccCCCCc--------------------cCC-CCccceehhhHHHHHHhh
Q 006570 608 PLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 608 a~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
++..++.... -++ +.++|||||||||||.++
T Consensus 778 SRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmS 829 (996)
T KOG0196|consen 778 SRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 829 (996)
T ss_pred eeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecc
Confidence 9987544311 234 999999999999999764
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=288.02 Aligned_cols=179 Identities=22% Similarity=0.290 Sum_probs=152.7
Q ss_pred HHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecc---cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
...++|...+.||+|+|++||+|+ ..+++.+|||++.+. ...-.+...+|-++|.++ .||.|++|+--+ +
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF----Q- 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF----Q- 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe----e-
Confidence 345678889999999999999999 567999999999753 223346678899999999 899999998544 3
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+...+|+|+||+++|+|.++|++ .+.+++.....++.+|+.||+|||+ .|||||||||+|||+|+||++||
T Consensus 145 ---D~~sLYFvLe~A~nGdll~~i~K---~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikI 215 (604)
T KOG0592|consen 145 ---DEESLYFVLEYAPNGDLLDLIKK---YGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKI 215 (604)
T ss_pred ---cccceEEEEEecCCCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEE
Confidence 45679999999999999999975 4679999999999999999999999 79999999999999999999999
Q ss_pred eCCCCCccccCCCCc------------------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL------------------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~------------------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||.|+.+...... ... +..+|+|+|||++|+|+.|.
T Consensus 216 TDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~ 284 (604)
T KOG0592|consen 216 TDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQ 284 (604)
T ss_pred eeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCC
Confidence 999999976432110 333 99999999999999999985
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=290.41 Aligned_cols=184 Identities=22% Similarity=0.341 Sum_probs=157.3
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
.+.+++++..+++.+.+.||+|.||+||||++. ..||||.++..... ..+.|+.|+.++++-+|.||+-+.|||.
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~- 458 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM- 458 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc-
Confidence 444677777777888999999999999999984 47999999876543 4578999999999999999999999995
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
.....||+.+|+|-+|+.++|. ....++..+.+.||.|||+||.|||. ++|||||||+.||++++++
T Consensus 459 --------~p~~AIiTqwCeGsSLY~hlHv--~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~ 525 (678)
T KOG0193|consen 459 --------NPPLAIITQWCEGSSLYTHLHV--QETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDL 525 (678)
T ss_pred --------CCceeeeehhccCchhhhhccc--hhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCC
Confidence 2235999999999999999986 34668899999999999999999999 8999999999999999999
Q ss_pred ceEEeCCCCCccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||++......... ... +..+||||||||+|||+||+
T Consensus 526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~ 590 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGE 590 (678)
T ss_pred cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCc
Confidence 9999999998654321100 223 99999999999999999996
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=269.96 Aligned_cols=178 Identities=19% Similarity=0.322 Sum_probs=152.7
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.|++|+||.||+|+ .++++.||+|+++..... -.-.-.+||.+|.+++|||||.+-.+.... .-
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~------~~ 149 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS------NM 149 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc------cc
Confidence 456678999999999999999 567899999999865422 234567999999999999999999988643 33
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+.+|+|||||+. +|..+++. ..+++...++..++.|+++|++|||+ ..|+|||||++|+|++..|.+||+|||+
T Consensus 150 d~iy~VMe~~Eh-DLksl~d~--m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 150 DKIYIVMEYVEH-DLKSLMET--MKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred ceeeeeHHHHHh-hHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccch
Confidence 459999999988 99999985 34678999999999999999999999 5899999999999999999999999999
Q ss_pred CccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+.++..... + .. ++..|+||+|||+.|++++.
T Consensus 224 AR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k 275 (419)
T KOG0663|consen 224 AREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK 275 (419)
T ss_pred hhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC
Confidence 9999876332 3 33 99999999999999999874
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=259.40 Aligned_cols=175 Identities=21% Similarity=0.371 Sum_probs=152.4
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+|...+.+|+|.||.||+|+ ..+|+.||||+++.... .......+|+..|+.++|+||+.+++++- ..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~--------~~ 73 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP--------HK 73 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc--------CC
Confidence 356778899999999999999 66799999999986533 23457789999999999999999998773 45
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+.+-+|+|||+. +|+..+++ +...++..++..++.++++|++|||. ..|+||||||.|+|++++|.+||+|||+
T Consensus 74 ~~l~lVfEfm~t-dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 74 SNLSLVFEFMPT-DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred CceEEEEEeccc-cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccc
Confidence 668999999987 99999985 45679999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|+...+.... .++ +...|+||.||++.||+-|
T Consensus 148 Ar~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr 198 (318)
T KOG0659|consen 148 ARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR 198 (318)
T ss_pred hhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc
Confidence 9988654322 344 9999999999999999865
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-33 Score=290.40 Aligned_cols=182 Identities=23% Similarity=0.378 Sum_probs=152.3
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeCC--C--cE-EEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeE
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTD--G--SR-VSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~--~--~~-vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
..++...++....+.||+|+||.||+|++.. + .. ||||..+... .....+|.+|+++|++++|||||+++|+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3445555666677999999999999999543 2 23 8999988522 3445789999999999999999999999
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+. ...++|+|||+|+||+|.++|++. ...++..+++.++.++|.||+|||+ .++|||||.++|+|++
T Consensus 230 a~--------~~~Pl~ivmEl~~gGsL~~~L~k~--~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~ 296 (474)
T KOG0194|consen 230 AV--------LEEPLMLVMELCNGGSLDDYLKKN--KKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYS 296 (474)
T ss_pred Ec--------CCCccEEEEEecCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheec
Confidence 86 445699999999999999999853 3369999999999999999999999 7999999999999999
Q ss_pred CCCceEEeCCCCCccccCC--CC-c--------------cCC-CCccceehhhHHHHHHhh
Q 006570 596 KALTAKLSGYNIPLPSKVR--NT-L--------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~--~~-~--------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
.++.+||+|||+++..... .. . ... +.++|||||||++||+++
T Consensus 297 ~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~ 357 (474)
T KOG0194|consen 297 KKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFE 357 (474)
T ss_pred CCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeec
Confidence 9999999999999865311 00 0 334 999999999999999987
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-33 Score=281.48 Aligned_cols=176 Identities=18% Similarity=0.318 Sum_probs=150.3
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChH-HHHHHHHHHhcCC-CcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQ-SLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|...++||.|.||.||+|+ ..+|+.||||+++..-....+ .=.||+..|++++ |||||++..++.+.
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~------- 81 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN------- 81 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc-------
Confidence 4567888999999999999999 667999999999865332222 2368999999998 99999999988632
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
...+|+|||||+. +|++++++ ++..+++.+++.|+.||++||+|+|. .|+.|||+||+|||+.....+||+|||
T Consensus 82 ~~~L~fVfE~Md~-NLYqLmK~--R~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 82 DRILYFVFEFMDC-NLYQLMKD--RNRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred CceEeeeHHhhhh-hHHHHHhh--cCCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccc
Confidence 2269999999977 99999986 37789999999999999999999999 699999999999999989999999999
Q ss_pred CCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhh
Q 006570 607 IPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+|+.+.+..-+ ... +.+.|+||+|||++|+.+
T Consensus 156 LARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~s 205 (538)
T KOG0661|consen 156 LAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYS 205 (538)
T ss_pred cccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHH
Confidence 99988654322 334 999999999999999875
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-33 Score=270.97 Aligned_cols=178 Identities=19% Similarity=0.285 Sum_probs=146.4
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.|...+.+|+|+||.||+|.. .+++.||||++..+.. .-.+|.++|++++|||||++.-++...... +.-..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~---d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTES---DEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCC---chhHH
Confidence 455679999999999999995 4578999999875432 224789999999999999999777643221 23356
Q ss_pred EEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCCCCC
Q 006570 531 FLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYNIP 608 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DfGla 608 (640)
.+||||||. +|.++++.+ ..+..++...++-+..|+.+||+|||+ .+|+||||||.|+|+|.+ |.+||||||.|
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 789999998 999999753 234567888899999999999999999 799999999999999988 99999999999
Q ss_pred ccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ + .. +.+.||||.|||+.||+-|.
T Consensus 174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~ 223 (364)
T KOG0658|consen 174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQ 223 (364)
T ss_pred eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCC
Confidence 987543321 3 34 99999999999999999884
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-32 Score=271.98 Aligned_cols=179 Identities=23% Similarity=0.351 Sum_probs=148.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++...+.||+|+||+||++.. ++|...|||.+........+.+.+|+.+|++++|||||+.+|..... ....
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~------~~~~ 90 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR------ENDE 90 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc------cCee
Confidence 3455678999999999999995 45899999999765322256789999999999999999999964311 1136
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIP 608 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfGla 608 (640)
+++.|||+++|+|.+++.+... .+++..+.++.+||++||+|||+ ++||||||||+|||++. ++.+||+|||++
T Consensus 91 ~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a 165 (313)
T KOG0198|consen 91 YNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLA 165 (313)
T ss_pred eEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccc
Confidence 8999999999999999976332 69999999999999999999998 79999999999999999 799999999999
Q ss_pred ccccC--C---CCc--------------c-CC--CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKV--R---NTL--------------S-FH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~--~---~~~--------------~-~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+.... . ... . +. ..++||||+||++.||+||+
T Consensus 166 ~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~ 219 (313)
T KOG0198|consen 166 KKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGK 219 (313)
T ss_pred cccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCC
Confidence 86552 0 000 2 22 45999999999999999996
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-32 Score=280.80 Aligned_cols=180 Identities=19% Similarity=0.364 Sum_probs=155.9
Q ss_pred HhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.+...+.+.||+|.||.|..+....+..||||+++..... .+.+|.+|+++|.+++|||||+++|+|. .+
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~--------~D 607 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV--------QD 607 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee--------cC
Confidence 44556778999999999999999877899999999876543 4589999999999999999999999997 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+.+++|+|||++|+|.+|+.+..... .+-....+|+.|||.||+||.+ .++||||+.++|||+|.++++||+|||+
T Consensus 608 ePicmI~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgm 683 (807)
T KOG1094|consen 608 DPLCMITEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGM 683 (807)
T ss_pred CchHHHHHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCccc
Confidence 56899999999999999998643222 4566678899999999999998 7999999999999999999999999999
Q ss_pred CccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......++ ..+ ++++|||+||+++||+++=|
T Consensus 684 sR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C 736 (807)
T KOG1094|consen 684 SRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLC 736 (807)
T ss_pred ccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHH
Confidence 9977655543 344 99999999999999999865
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-32 Score=258.51 Aligned_cols=176 Identities=20% Similarity=0.294 Sum_probs=152.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||.|+||.|..++. .+|..+|+|+++...- ...+...+|..+|+.+.||.++++++.+. +
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~--------d 115 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK--------D 115 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec--------c
Confidence 4566789999999999999994 4588999999986532 23456788999999999999999998774 5
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
...+||||||++||.|+.++++ .++++++.++.+|.+|+.|++|||+ .+|++||+||+|||+|.+|.+||+|||
T Consensus 116 ~~~lymvmeyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred CCeEEEEEeccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEecc
Confidence 6779999999999999999974 5679999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++|.|||||++|||+.|.
T Consensus 190 FAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~ 238 (355)
T KOG0616|consen 190 FAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGY 238 (355)
T ss_pred ceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCC
Confidence 99876543211 333 99999999999999999983
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-32 Score=278.48 Aligned_cols=165 Identities=19% Similarity=0.337 Sum_probs=143.3
Q ss_pred CCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 454 DPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
...+-+|.|+.|.||+|++. ++.||||+++.-+ ..+|.-|++++||||+.+.|+|. ....++||
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCt--------qsPcyCIi 190 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCT--------QSPCYCII 190 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeec--------CCceeEEe
Confidence 34678999999999999985 7899999987322 35678899999999999999995 34568999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
||||+.|-|+++|+. ...+.......+..+||.||.|||. ..|||||||+-||||..+..+||+|||.++....
T Consensus 191 MEfCa~GqL~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 191 MEFCAQGQLYEVLKA---GRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred eeccccccHHHHHhc---cCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 999999999999964 5667888889999999999999999 6999999999999999999999999999988765
Q ss_pred CCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 614 RNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 614 ~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..+. ... ++|+||||||||||||+||.
T Consensus 265 ~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~E 308 (904)
T KOG4721|consen 265 KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGE 308 (904)
T ss_pred hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcC
Confidence 5332 223 99999999999999999984
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=273.33 Aligned_cols=148 Identities=19% Similarity=0.326 Sum_probs=131.8
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
..++|+....||+|+||.||.|+ ..+|+.+|+|++++.. ....+..+.|.++|...++|.||+++-.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-------- 210 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-------- 210 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------
Confidence 45789999999999999999999 5569999999998653 23346788899999999999999998544
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
++.+++||||||.|||++..+|.. ...|++.....++.+++.|++-+|+ .|+|||||||+|+|||..|++||+|
T Consensus 211 QD~~~LYLiMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 211 QDKEYLYLIMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred cCCCeeEEEEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeecc
Confidence 366789999999999999999964 6679999999999999999999999 7999999999999999999999999
Q ss_pred CCCCcc
Q 006570 605 YNIPLP 610 (640)
Q Consensus 605 fGla~~ 610 (640)
|||+..
T Consensus 285 FGLs~g 290 (550)
T KOG0605|consen 285 FGLSTG 290 (550)
T ss_pred ccccch
Confidence 999864
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-32 Score=301.54 Aligned_cols=177 Identities=23% Similarity=0.423 Sum_probs=151.3
Q ss_pred cCCCCCCccccCCccceEEEEeCC--Cc----EEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD--GS----RVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
.+.+..+.||+|+||.||+|.+.+ |. .||||.++... .+...+|.+|..+|++++|||||+++|+|..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~----- 766 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD----- 766 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-----
Confidence 345567889999999999999643 43 49999997643 3456789999999999999999999999983
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCC----CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
....+|++|||++|+|..||++.+. ...+...+.+.++.|||+|+.||++ +++|||||.++|+|+++...
T Consensus 767 ---~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~ 840 (1025)
T KOG1095|consen 767 ---SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRV 840 (1025)
T ss_pred ---CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCc
Confidence 3457999999999999999987432 4568899999999999999999999 79999999999999999999
Q ss_pred eEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh
Q 006570 600 AKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+||+|||+|+.+....++ .+. +.|+|||||||+|||++|
T Consensus 841 VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifs 899 (1025)
T KOG1095|consen 841 VKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFS 899 (1025)
T ss_pred EEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHh
Confidence 999999999965433322 445 999999999999999987
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-32 Score=276.10 Aligned_cols=175 Identities=25% Similarity=0.358 Sum_probs=152.3
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|...+.||+|+||.||||+ ..+.+.||+|.+.+..+ +..+.+.+|++++++++|||||.+++++ +..
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf--------Et~ 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF--------ETS 73 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh--------ccc
Confidence 568888999999999999999 44688999999976433 2346789999999999999999999876 366
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
.+.|+|.||+.+ +|+.++.. ...+++..+..|+.+++.||.|||+ .+|+|||+||.|||++..+.+|+||||+
T Consensus 74 ~~~~vVte~a~g-~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 74 AHLWVVTEYAVG-DLFTILEQ---DGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred ceEEEEehhhhh-hHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhh
Confidence 779999999977 99999964 6679999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ +.. +..+|.||+||++||+.+|.
T Consensus 147 Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~ 197 (808)
T KOG0597|consen 147 ARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQ 197 (808)
T ss_pred hhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCC
Confidence 9977543211 334 89999999999999999985
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=276.22 Aligned_cols=178 Identities=25% Similarity=0.410 Sum_probs=152.2
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecc----cC-CChHHHHHHHHHHhcCC-CcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK----QR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~ 521 (640)
....|...+.||+|+||+||.|+ ..++..||+|++... .. ...+.+.+|+.++++++ ||||++++.++.
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~---- 90 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA---- 90 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe----
Confidence 34678889999999999999998 456899999977653 11 23466778999999998 999999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-Cce
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTA 600 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ 600 (640)
....+|+||||+.+|+|++++.+ ..++.+....+++.|++.|++|+|+ .+|+||||||+|||+|.+ +++
T Consensus 91 ----t~~~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 91 ----TPTKIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred ----cCCeEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCE
Confidence 34559999999999999999975 5678899999999999999999999 799999999999999999 999
Q ss_pred EEeCCCCCcccc-CCCCc------------------c-CCCCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSK-VRNTL------------------S-FHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~-~~~~~------------------~-~~~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||++.... ..... . ..+.++||||+||+||-|++|+
T Consensus 161 Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~ 220 (370)
T KOG0583|consen 161 KLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR 220 (370)
T ss_pred EEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence 999999998773 21111 2 2289999999999999999995
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-32 Score=249.40 Aligned_cols=178 Identities=18% Similarity=0.284 Sum_probs=155.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|.||.||.|+. .++-.||+|++.+.+ .+..+++.+|+++-+.++||||.+++||+. +
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh--------d 93 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH--------D 93 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee--------c
Confidence 4678899999999999999994 457789999997543 345688999999999999999999999996 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
...+|+++||.+.|+++..|++ .....+++.....+..|+|.|+.|+|. ++||||||||+|+|++.++..||+|||
T Consensus 94 ~~riyLilEya~~gel~k~L~~-~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 94 SKRIYLILEYAPRGELYKDLQE-GRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred cceeEEEEEecCCchHHHHHHh-cccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCC
Confidence 5669999999999999999985 345668889999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
-+......... +.. +..+|+|++||+.||++.|+
T Consensus 170 wsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ 219 (281)
T KOG0580|consen 170 WSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGL 219 (281)
T ss_pred ceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcC
Confidence 98776433222 333 99999999999999999986
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=265.61 Aligned_cols=179 Identities=19% Similarity=0.354 Sum_probs=153.7
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+.|+..+.||.|..++||+|+ .+.++.||||++..+.-. ..+.+.+|+..|+.++||||++.+..+. .+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv--------v~ 96 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV--------VD 96 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE--------ec
Confidence 3578889999999999999999 677899999999875433 3588999999999999999999988776 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..+|+||.||.+||+.++++..- ...+++..+..|.+++++||.|||+ .|.||||||+.|||||++|.+||+|||.
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYY-PDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHc-cccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCcee
Confidence 56999999999999999998643 3458999999999999999999999 6999999999999999999999999998
Q ss_pred CccccCCCCc----------------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+..+-..+.. ..+ +.|+|||||||+..||++|.
T Consensus 173 sa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~ 229 (516)
T KOG0582|consen 173 SASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGH 229 (516)
T ss_pred eeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCC
Confidence 7554322211 112 88999999999999999984
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=275.84 Aligned_cols=175 Identities=21% Similarity=0.391 Sum_probs=154.6
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
..|+.-.+||+|+.|.||.|+ ..+++.||||++........+-+.+|+.+|+..+|+|||.++..++. ++.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv--------~de 344 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLV--------GDE 344 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcc--------cce
Confidence 457777899999999999998 66789999999988776667778999999999999999999988763 356
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
+|+|||||++|+|.|.+.. ..+++.++..|++++++||+|||. .+|||||||.+|||++.++.+||+|||++.
T Consensus 345 LWVVMEym~ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred eEEEEeecCCCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeee
Confidence 8999999999999999963 458999999999999999999999 799999999999999999999999999998
Q ss_pred cccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+...... .+ . ++|.||||||++++||+.|.
T Consensus 418 qi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE 466 (550)
T KOG0578|consen 418 QISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE 466 (550)
T ss_pred ccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC
Confidence 87544321 22 3 99999999999999999984
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=266.11 Aligned_cols=181 Identities=20% Similarity=0.303 Sum_probs=149.2
Q ss_pred HHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--------------CChHHHHHHHHHHhcCCCcccce
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--------------HLPQSLMQHVELLSKLRHRHLVS 511 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~ 511 (640)
....++|++.+.||+|.||.|-+|+ ..+++.||||++.+... ...+...+||.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 3456889999999999999999999 55799999999964321 11257899999999999999999
Q ss_pred eeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCC-CCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCC
Q 006570 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (640)
Q Consensus 512 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~-l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~ 590 (640)
|+.+.- .+ ..+.+|||+|||..|.+...= ...+ ++..++++|++++..||+|||. ++||||||||+
T Consensus 173 LiEvLD-----DP-~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPs 239 (576)
T KOG0585|consen 173 LIEVLD-----DP-ESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPS 239 (576)
T ss_pred EEEeec-----Cc-ccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchh
Confidence 999773 22 456699999999998875432 3344 8999999999999999999999 79999999999
Q ss_pred ceeecCCCceEEeCCCCCccccCCCCc----------------------c---CC--CCccceehhhHHHHHHhhcC
Q 006570 591 NILLDKALTAKLSGYNIPLPSKVRNTL----------------------S---FH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 591 NILl~~~~~~kl~DfGla~~~~~~~~~----------------------~---~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|++++|++||+|||.+......... + .. +.+.||||+||+||.|+.|.
T Consensus 240 NLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 240 NLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred heEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhcc
Confidence 999999999999999998755221110 1 22 88999999999999999884
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=260.27 Aligned_cols=182 Identities=21% Similarity=0.376 Sum_probs=150.9
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcc-cceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRH-LVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~~~~~ 527 (640)
.|+..++||+|+||+||+|+ ..+|+.||+|++..... .......+|+.++++++|+| |+++++++..... .+..
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~--~~~~ 89 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN--HRGI 89 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc--cccc
Confidence 35556789999999999999 56789999999986543 34567789999999999999 9999999863221 2234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCC-CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
...++|+||++. +|.+++...... ..++...++.++.|+++||+|||+ .+|+||||||.|||++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccc
Confidence 578999999976 999999864322 457778899999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCC-c----------------cC-C-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRNT-L----------------SF-H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~~-~----------------~~-~-~~~~DvwS~Gvvl~elltG 639 (640)
+|+...-+.. . +. . ++..||||+||++.||+++
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~ 217 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTR 217 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhC
Confidence 9987652221 1 33 3 9999999999999999986
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-31 Score=276.54 Aligned_cols=180 Identities=19% Similarity=0.342 Sum_probs=147.2
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++..+ +||||++++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK--- 82 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC---
Confidence 45788899999999999999973 2356899999974322 2345788999999999 89999999998852
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCC--------------------------------------------------
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------------------------------------------- 551 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 551 (640)
....+++||||+++|+|.++++....
T Consensus 83 ----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 83 ----PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred ----CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 23458999999999999999974211
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCC------
Q 006570 552 ---------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------ 616 (640)
Q Consensus 552 ---------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------ 616 (640)
...+++.++..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++.......
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 235 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGS 235 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccC
Confidence 1347888999999999999999998 7999999999999999999999999999975421100
Q ss_pred ------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 617 ------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 617 ------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+ +.. +.++|||||||++|||++ |
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g 273 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLG 273 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCC
Confidence 1 233 889999999999999997 5
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=263.17 Aligned_cols=175 Identities=18% Similarity=0.355 Sum_probs=151.9
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCCh---HHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.+|++.+.||+|.||.|-+|. ...|+.||||.++++.-.+. -.+++|+++|+.++||||+.++.++ +.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF--------EN 124 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF--------EN 124 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh--------cC
Confidence 457778899999999999998 57799999999987654433 4578999999999999999999877 35
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+.+.|||||..+|.|+||+.+ .+.+++.+...+++||..|+.|+|. .+++|||||.+|||+|+++++||+|||
T Consensus 125 kdKIvivMEYaS~GeLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISE---RGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred CceEEEEEEecCCccHHHHHHH---hccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccc
Confidence 6679999999999999999965 5679999999999999999999999 599999999999999999999999999
Q ss_pred CCccccCCCC----------c------cCC--CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRNT----------L------SFH--TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~~----------~------~~~--~~~~DvwS~Gvvl~elltG 639 (640)
++-.+..... . +.. ++.+|-||+||+||-|+.|
T Consensus 199 LSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyG 249 (668)
T KOG0611|consen 199 LSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYG 249 (668)
T ss_pred hhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhc
Confidence 9976543221 1 322 8999999999999999887
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-31 Score=268.72 Aligned_cols=176 Identities=16% Similarity=0.259 Sum_probs=149.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++. +
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~ 72 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--------D 72 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc--------c
Confidence 3688889999999999999995 468999999997532 123456889999999999999999988764 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.++++. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 73 QRFLYMLMEYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred CCeEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecC
Confidence 4578999999999999999964 4468899999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~ 195 (291)
T cd05612 147 FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGY 195 (291)
T ss_pred cchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 98765332110 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=266.11 Aligned_cols=176 Identities=25% Similarity=0.409 Sum_probs=145.0
Q ss_pred CCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhc--CCCcccceeeeEEEecccCCCCCCCeE
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK--LRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.+..++||+|.||.||||.+. ++.||||++... ..+.|..|.++.+. ++|+||++++++-. ........+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek----r~t~~~~ey 283 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEK----RGTADRMEY 283 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhc----cCCccccce
Confidence 344678999999999999985 589999999854 35788888888776 48999999998643 111224578
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC------CCCeeccCCCCCceeecCCCceEEeC
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV------APGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+||+||.+.|+|.+||. ...++|....+|+..+++||+|||++. .++|+|||||++|||+..|+++.|+|
T Consensus 284 wLVt~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eEEeeeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 99999999999999996 456899999999999999999999743 47899999999999999999999999
Q ss_pred CCCCccccCCCCc------------------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL------------------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~------------------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|......... . .. -.+.||||+|.|||||++-|
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC 421 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC 421 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999766432211 1 11 46789999999999999877
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=271.19 Aligned_cols=176 Identities=20% Similarity=0.283 Sum_probs=150.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++. .
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~ 89 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ--------D 89 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE--------c
Confidence 5678889999999999999995 468899999997532 223467889999999999999999999875 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeecc
Confidence 4568999999999999999964 3467899999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||+||.
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 212 (329)
T PTZ00263 164 FAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGY 212 (329)
T ss_pred CceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCC
Confidence 99765432111 233 88999999999999999984
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=263.83 Aligned_cols=176 Identities=20% Similarity=0.225 Sum_probs=147.5
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++|+||+++++++. ...
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~--------~~~ 73 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE--------TKD 73 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc--------cCC
Confidence 66778999999999999984 578999999987532 223346788999999999999999998874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 74 ~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 74 ALCLVLTIMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred eEEEEEEecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 689999999999999888642 23468999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC-------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT-------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~-------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . +.. +.++|||||||++|||++|.
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~ 198 (285)
T cd05631 150 VQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQ 198 (285)
T ss_pred EEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCC
Confidence 76432110 0 234 88999999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=273.91 Aligned_cols=176 Identities=18% Similarity=0.273 Sum_probs=149.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||+||+|+. .+++.||+|+++... ....+.+.+|++++.+++||||+++++++. +
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~--------~ 72 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ--------D 72 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe--------c
Confidence 4688899999999999999984 468899999997532 223356888999999999999999998874 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 73 KLNLYLIMEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred CCeEEEEEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeecc
Confidence 4568999999999999999964 4568999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCC-------------------------------------------CCc---------cCC-CCccceehhhHHH
Q 006570 607 IPLPSKVR-------------------------------------------NTL---------SFH-TDRSSLYKIILII 633 (640)
Q Consensus 607 la~~~~~~-------------------------------------------~~~---------~~~-~~~~DvwS~Gvvl 633 (640)
+++..... .+. +.. +.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 98643210 000 233 8899999999999
Q ss_pred HHHhhcC
Q 006570 634 CVITLCC 640 (640)
Q Consensus 634 ~elltG~ 640 (640)
|||++|.
T Consensus 227 ~ell~G~ 233 (363)
T cd05628 227 YEMLIGY 233 (363)
T ss_pred HHHHhCC
Confidence 9999985
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=256.44 Aligned_cols=180 Identities=18% Similarity=0.289 Sum_probs=151.4
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeec--ccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..|...+.||+|+||.|+.+. ..+|+.||||++.. ......++..+|+.+|+.++|+||+.+.++..-... +.-
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~---~~f 98 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR---DKF 98 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc---ccc
Confidence 445557899999999999998 55789999999973 334456788999999999999999999998763122 234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..+|+|+|+|+. +|...++. +..++......+..|+++||.|+|+ .+|+|||+||+|+|++.+...||+|||+
T Consensus 99 ~DvYiV~elMet-DL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELMET-DLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHHhh-HHHHHHHc---CccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccc
Confidence 569999999955 99999963 4559999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCC---C--Cc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVR---N--TL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~---~--~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+..... . +. ... +...||||.||++.||++|.
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk 225 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK 225 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC
Confidence 9988531 1 11 334 99999999999999999984
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=270.33 Aligned_cols=176 Identities=19% Similarity=0.289 Sum_probs=149.2
Q ss_pred cCCCCCCccccCCccceEEEEeCC--CcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+... +..||+|++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-------- 101 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-------- 101 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE--------
Confidence 468888999999999999998533 3689999986432 233467889999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
++...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DF 175 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDF 175 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecC
Confidence 34568999999999999999964 3468899999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||+||.
T Consensus 176 G~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 225 (340)
T PTZ00426 176 GFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGC 225 (340)
T ss_pred CCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCC
Confidence 999765432111 233 88999999999999999984
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=274.58 Aligned_cols=145 Identities=19% Similarity=0.310 Sum_probs=127.2
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+++ ..+++.||||++.... ....+.+.+|++++++++||||+++++++. +
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--------~ 72 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ--------D 72 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE--------c
Confidence 368888999999999999998 4578999999986532 223456888999999999999999999875 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 73 AQYLYLIMEFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred CCeeEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecc
Confidence 4568999999999999999964 4568899999999999999999998 799999999999999999999999999
Q ss_pred CCc
Q 006570 607 IPL 609 (640)
Q Consensus 607 la~ 609 (640)
+++
T Consensus 147 la~ 149 (377)
T cd05629 147 LST 149 (377)
T ss_pred ccc
Confidence 985
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=268.02 Aligned_cols=170 Identities=17% Similarity=0.198 Sum_probs=143.6
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.||+|+||.||+++. .+|+.||+|+++... ......+.+|++++++++||||+++++++. .+...++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------~~~~~~l 72 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ--------THDRLCF 72 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE--------cCCEEEE
Confidence 4699999999999984 568999999997542 222356788999999999999999998874 4457899
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 73 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 73 VMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 9999999999999964 4568999999999999999999998 699999999999999999999999999987532
Q ss_pred CCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... +. +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 192 (323)
T cd05571 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCC
Confidence 111 00 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=283.52 Aligned_cols=187 Identities=18% Similarity=0.308 Sum_probs=153.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCC-cEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDG-SRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++++.+.|.+|||+.||.|+...+ ..||+|++-..+....+.+.+||++|+.++ |+|||.+++....... ......
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~-~~~~~~ 115 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRS-SNNGVW 115 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEecccccccc-CCCcee
Confidence 4566778999999999999996655 999999997766667788999999999996 9999999994321111 111245
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
+++|.||||++|+|-|++..+. ...|++.++++|+.++++|+++||. +.++|||||||.+||||+.++..||||||.|
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rl-q~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRL-QTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHH-hccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 7899999999999999998643 3459999999999999999999997 6789999999999999999999999999999
Q ss_pred ccccCCCCc-----------------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...-...+. +.. ++|+||||+||+||-|+..+
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t 255 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFT 255 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhC
Confidence 754222111 333 99999999999999998653
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=269.20 Aligned_cols=176 Identities=18% Similarity=0.250 Sum_probs=150.1
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++..++||||+++++++. .
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--------~ 72 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--------D 72 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE--------c
Confidence 36888899999999999999954 58899999997542 223457889999999999999999998874 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 73 DEYLYLAMEYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCc
Confidence 4568999999999999999964 4468899999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 147 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 195 (333)
T cd05600 147 LSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGF 195 (333)
T ss_pred CCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCC
Confidence 99764321110 234 88999999999999999984
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=273.39 Aligned_cols=176 Identities=17% Similarity=0.271 Sum_probs=149.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||+||+|+. .+++.||||+++... ......+.+|++++..++||||+++++++. .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------~ 72 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ--------D 72 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--------c
Confidence 4688899999999999999995 468999999997532 223456788999999999999999998875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 73 ENYLYLIMEYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred CCeEEEEECCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecc
Confidence 5678999999999999999964 3468999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCC----------------------------------------------CCc---------cCC-CCccceehhh
Q 006570 607 IPLPSKVR----------------------------------------------NTL---------SFH-TDRSSLYKII 630 (640)
Q Consensus 607 la~~~~~~----------------------------------------------~~~---------~~~-~~~~DvwS~G 630 (640)
+++..... ++. ... +.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 98643211 000 223 7899999999
Q ss_pred HHHHHHhhcC
Q 006570 631 LIICVITLCC 640 (640)
Q Consensus 631 vvl~elltG~ 640 (640)
|++|||++|.
T Consensus 227 ~il~el~~G~ 236 (364)
T cd05599 227 VIMYEMLVGY 236 (364)
T ss_pred hHHHHhhcCC
Confidence 9999999984
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=265.32 Aligned_cols=179 Identities=18% Similarity=0.367 Sum_probs=146.6
Q ss_pred cCCCCCCccccCCccceEEEEeCC-----------------CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCccccee
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD-----------------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSI 512 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l 512 (640)
++|...+.||+|+||.||+|...+ +..||+|.+..... ....++.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467788999999999999997532 34699999875422 234678999999999999999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC----------------CCCCCCHHHHHHHHHHHHHHhhhccc
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK----------------KKDMLKWPQRMAIIIGATRGVQFLHT 576 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~~L~yLH~ 576 (640)
++++. .....++||||+++|+|.+++.... ....++|..+.+++.|++.||+|||+
T Consensus 85 ~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 85 LGVCV--------DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred EEEEe--------cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99885 2345899999999999999986421 11347888999999999999999998
Q ss_pred CCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCC------------Cc-------cCC-CCccceehhhHHHHHH
Q 006570 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN------------TL-------SFH-TDRSSLYKIILIICVI 636 (640)
Q Consensus 577 ~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~------------~~-------~~~-~~~~DvwS~Gvvl~el 636 (640)
.+|+||||||+|||+++++.+||+|||+++...... .+ ... +.++|||||||++|||
T Consensus 157 ---~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 233 (304)
T cd05096 157 ---LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233 (304)
T ss_pred ---CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 699999999999999999999999999997542211 00 233 8899999999999999
Q ss_pred hhcC
Q 006570 637 TLCC 640 (640)
Q Consensus 637 ltG~ 640 (640)
+++|
T Consensus 234 ~~~~ 237 (304)
T cd05096 234 LMLC 237 (304)
T ss_pred HHcc
Confidence 8764
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=263.94 Aligned_cols=178 Identities=22% Similarity=0.406 Sum_probs=147.6
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC--CCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL--RHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.+....+.||+|.||.||+|+++ |+.||||++... +++.+.+|.++.+.+ +|+||..+++.-. .....-.
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~----~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADN----KDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccc----cCCCceE
Confidence 45677899999999999999996 899999999743 457899999998875 9999999988643 1112335
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccC-----CCCCeeccCCCCCceeecCCCceEEe
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG-----VAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.+|||+||-+.|||+|||. +..++....++++..+|.||++||.+ ..|.|.|||||+.|||+..++.+.|+
T Consensus 283 QLwLvTdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEeeecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 7899999999999999996 35689999999999999999999942 35889999999999999999999999
Q ss_pred CCCCCccccCCCCc---------------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL---------------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~---------------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|+|......... -.+ -..+||||||.|+||++.-|
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc 423 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRC 423 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 99999765433111 123 67799999999999998654
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=273.35 Aligned_cols=144 Identities=17% Similarity=0.279 Sum_probs=126.4
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.|+..+.||+|+||+||+|+ ..+++.||+|++.... ....+.+.+|++++++++||||+++++++. +.
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~--------~~ 73 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ--------DK 73 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe--------cC
Confidence 57788999999999999998 4568899999997532 223457889999999999999999999885 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 74 DNLYFVMDYIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred CEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 568999999999999999964 3458899999999999999999998 7999999999999999999999999999
Q ss_pred Cc
Q 006570 608 PL 609 (640)
Q Consensus 608 a~ 609 (640)
++
T Consensus 148 ~~ 149 (381)
T cd05626 148 CT 149 (381)
T ss_pred Cc
Confidence 75
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=259.15 Aligned_cols=187 Identities=17% Similarity=0.239 Sum_probs=151.6
Q ss_pred CCCCHHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeE
Q 006570 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 439 ~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
+.++.+++. ......||+|++|.||+|.+ +|+.||||.++...... .+.+.+|+++|++++||||++++|+
T Consensus 13 ~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~ 86 (283)
T PHA02988 13 KCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF 86 (283)
T ss_pred eecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence 345555652 23346799999999999998 68999999997653333 3678899999999999999999999
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+.... +.....++||||+++|+|.++++. ...+++....+++.+++.||+|||+. .+++||||||+||+++
T Consensus 87 ~~~~~----~~~~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~ 157 (283)
T PHA02988 87 IIDIV----DDLPRLSLILEYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVT 157 (283)
T ss_pred EEecc----cCCCceEEEEEeCCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEEC
Confidence 86311 123458999999999999999964 34689999999999999999999973 4788999999999999
Q ss_pred CCCceEEeCCCCCccccCCCC-----c---------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKVRNT-----L---------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~~~-----~---------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++.+||+|||+++....... . + .. +.++|||||||++|||++|.
T Consensus 158 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~ 219 (283)
T PHA02988 158 ENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK 219 (283)
T ss_pred CCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCC
Confidence 999999999999875332111 0 2 33 88999999999999999984
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=242.63 Aligned_cols=186 Identities=18% Similarity=0.267 Sum_probs=160.1
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|.+.+.+|+|+|+.||.++ ..+++.+|+|++.....++.+...+|++..++++||||+++++++.....| ...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D---~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD---GKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc---Cce
Confidence 4678899999999999999999 778999999999877767778899999999999999999999988743332 556
Q ss_pred eEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..|++++|...|+|.+.++..+ ++..+++.+++.|+.++++||++||+.. ++++||||||.|||+.+++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccC
Confidence 7899999999999999998644 3457999999999999999999999843 4699999999999999999999999999
Q ss_pred CccccCCCCc-----------------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 608 PLPSKVRNTL-----------------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 608 a~~~~~~~~~-----------------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+....-.... ... ++++|||||||+||+|+.|
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~ 237 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFG 237 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHc
Confidence 9865321110 233 9999999999999999877
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=272.03 Aligned_cols=178 Identities=13% Similarity=0.187 Sum_probs=149.7
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
...++|+..+.||+|+||.||+++. .+++.||+|.+.... ....+.+.+|+++++.++||||+++++++.
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~------ 113 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ------ 113 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE------
Confidence 3456799999999999999999995 458899999986432 223456889999999999999999998874
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.+...|+||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+
T Consensus 114 --~~~~~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~ 184 (370)
T cd05621 114 --DDKYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLA 184 (370)
T ss_pred --cCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEE
Confidence 44678999999999999999963 247889999999999999999998 799999999999999999999999
Q ss_pred CCCCCccccCCCC---------c---------c----CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT---------L---------S----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~---------~---------~----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... . . .. +.++||||+||++|||++|+
T Consensus 185 DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~ 244 (370)
T cd05621 185 DFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 244 (370)
T ss_pred ecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCC
Confidence 9999976532110 0 1 12 67999999999999999985
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=265.79 Aligned_cols=170 Identities=16% Similarity=0.205 Sum_probs=142.9
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.||+|+||.||+++. .+|..||+|+++... ......+.+|++++++++||||+++++++. .....++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~--------~~~~~~l 72 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ--------THDRLCF 72 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe--------cCCEEEE
Confidence 4689999999999994 568999999997542 223356778999999999999999998875 3456899
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~E~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 73 VMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 9999999999998864 3468999999999999999999998 699999999999999999999999999986531
Q ss_pred CCC--------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRN--------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~--------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... + + +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~ 192 (323)
T cd05595 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCC
Confidence 110 0 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=264.52 Aligned_cols=170 Identities=18% Similarity=0.216 Sum_probs=143.5
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.||+|+||.||+++. .+++.||+|++.... ......+.+|+++++.++||||+++++++. .....++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~~~~l 72 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--------TKDRLCF 72 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--------cCCEEEE
Confidence 4689999999999994 568999999997542 223457888999999999999999998774 4456899
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~Ey~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 73 VMEYVNGGELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred EEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 9999999999999864 4468999999999999999999998 799999999999999999999999999987532
Q ss_pred CCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... +. +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~ 192 (328)
T cd05593 147 TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (328)
T ss_pred CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCC
Confidence 110 00 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-31 Score=269.80 Aligned_cols=182 Identities=16% Similarity=0.358 Sum_probs=156.9
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeCC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++++....+++..++||-|.||.||.|.|+. .-.||||.++.+. ...++|..|..+|+.++|||+|+++|+|.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT----- 333 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT----- 333 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhc-----
Confidence 4555555677788999999999999999764 5689999998654 34689999999999999999999999996
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
.+...|||+|||.+|+|.+||+++. +..++....+.+|.||+.||+||.. .++|||||.++|+|+.++..+||
T Consensus 334 ---~EpPFYIiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 334 ---HEPPFYIITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred ---cCCCeEEEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEe
Confidence 3445899999999999999999854 4557777889999999999999998 79999999999999999999999
Q ss_pred eCCCCCccccCCCCc-----------------cCC--CCccceehhhHHHHHHhh
Q 006570 603 SGYNIPLPSKVRNTL-----------------SFH--TDRSSLYKIILIICVITL 638 (640)
Q Consensus 603 ~DfGla~~~~~~~~~-----------------~~~--~~~~DvwS~Gvvl~ellt 638 (640)
+|||+++++....+. ... +.|+|||+|||+||||.|
T Consensus 407 ADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIAT 461 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 461 (1157)
T ss_pred eccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHh
Confidence 999999988644332 222 899999999999999987
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=262.75 Aligned_cols=168 Identities=17% Similarity=0.198 Sum_probs=142.1
Q ss_pred cccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 459 ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++. .....++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~~~lv~ 72 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ--------SPEKLYLVL 72 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe--------cCCeEEEEE
Confidence 69999999999995 458899999997532 223456788999999999999999998774 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 73 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 73 AFINGGELFHHLQR---EGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999999999964 3468999999999999999999998 79999999999999999999999999998753211
Q ss_pred C--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 615 N--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 615 ~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
. +. +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~ 190 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL 190 (312)
T ss_pred CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCC
Confidence 1 00 223 88999999999999999984
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-30 Score=271.98 Aligned_cols=144 Identities=18% Similarity=0.275 Sum_probs=126.1
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.|+..+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++. ++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~--------~~ 73 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ--------DK 73 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE--------eC
Confidence 477889999999999999994 568899999997532 123457889999999999999999999875 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|||||++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 74 DNLYFVMDYIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred CEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 568999999999999999964 3457889999999999999999998 7999999999999999999999999999
Q ss_pred Cc
Q 006570 608 PL 609 (640)
Q Consensus 608 a~ 609 (640)
++
T Consensus 148 a~ 149 (382)
T cd05625 148 CT 149 (382)
T ss_pred Cc
Confidence 74
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=271.70 Aligned_cols=145 Identities=17% Similarity=0.272 Sum_probs=127.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++.+. +
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------~ 72 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ--------D 72 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE--------c
Confidence 3688899999999999999994 468899999986432 223467889999999999999999998874 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
++..++||||+++|+|.+++.. ...+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 73 KDNLYFVMDYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 4578999999999999999964 3468888999999999999999998 799999999999999999999999999
Q ss_pred CCc
Q 006570 607 IPL 609 (640)
Q Consensus 607 la~ 609 (640)
++.
T Consensus 147 ~a~ 149 (376)
T cd05598 147 LCT 149 (376)
T ss_pred CCc
Confidence 974
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-30 Score=267.22 Aligned_cols=175 Identities=19% Similarity=0.281 Sum_probs=152.0
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
-|...+.||+|+.|.|-.|+ ..+|+.+|||++.... ......+.+|+-+|+-+.||||+++++++. ..
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe--------~~ 84 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE--------NK 84 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec--------cC
Confidence 35668899999999999999 5689999999997652 223467899999999999999999999874 56
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
.++|+|.||+++|.|++++.. .+++++.+..+++.||+.|+.|+|+ .+|+|||+||+|+|+|..+++||+|||+
T Consensus 85 ~~lylvlEyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGM 158 (786)
T KOG0588|consen 85 QHLYLVLEYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGM 158 (786)
T ss_pred ceEEEEEEecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccce
Confidence 679999999999999999974 5679999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCC----------CCc------cCC--CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVR----------NTL------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~----------~~~------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
|...... ++. +.. +.++||||.|||||-|+||.
T Consensus 159 AsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~ 209 (786)
T KOG0588|consen 159 ASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGK 209 (786)
T ss_pred eecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCC
Confidence 9765322 111 333 99999999999999999995
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-31 Score=279.82 Aligned_cols=170 Identities=21% Similarity=0.389 Sum_probs=148.0
Q ss_pred CCCccccCCccceEEEE-eCCC----cEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 455 PTNLIGEGSQGQLYKGF-LTDG----SRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~-~~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
..++||+|+||+||+|. .++| .+||+|++.... .+..+++.+|+-+|.+++|||+++++|+|.. .
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~---------s 770 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML---------S 770 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc---------c
Confidence 36889999999999998 4554 469999887543 3456899999999999999999999999962 2
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
.+.||++|||.|+|.||++. .+..+.....+.+..|||+||.|||. +++|||||.++|||+.+-..+||.|||++
T Consensus 771 ~~qlvtq~mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 771 TLQLVTQLMPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred hHHHHHHhcccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchh
Confidence 37899999999999999986 45678899999999999999999998 79999999999999999999999999999
Q ss_pred ccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh
Q 006570 609 LPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 609 ~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+........ .+. +.++|||||||++||++|
T Consensus 846 ~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmT 895 (1177)
T KOG1025|consen 846 KLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMT 895 (1177)
T ss_pred hccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHh
Confidence 987654432 233 999999999999999987
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=263.30 Aligned_cols=171 Identities=17% Similarity=0.198 Sum_probs=142.8
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.||+|+||.||+++. .+++.||+|+++... ......+.+|++++..++||||+++++++. .....++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~--------~~~~~~l 72 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ--------THDRLCF 72 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE--------cCCEEEE
Confidence 4689999999999984 568999999997542 223456788999999999999999998774 3456899
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 73 v~E~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~ 147 (325)
T cd05594 73 VMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 147 (325)
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence 9999999999998864 44689999999999999999999963 589999999999999999999999999986532
Q ss_pred CCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... +. +.. +.++|||||||++|||+||.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~ 193 (325)
T cd05594 148 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193 (325)
T ss_pred CCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCC
Confidence 110 00 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=258.55 Aligned_cols=176 Identities=19% Similarity=0.363 Sum_probs=147.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+. .+++.||+|.++... ......+.+|++++++++||||+++++++. .+.
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~~ 76 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH--------TER 76 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc--------CCC
Confidence 4688899999999999999985 468899999987543 233457889999999999999999999874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 77 ~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 77 CLTLVFEYLDS-DLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred eEEEEEeCCCc-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 68999999975 99999864 23457899999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... + + .. +.++||||+||++|||+||.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~ 201 (288)
T cd07871 151 RAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR 201 (288)
T ss_pred eeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCC
Confidence 75422110 0 2 23 78899999999999999984
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-30 Score=269.78 Aligned_cols=177 Identities=14% Similarity=0.204 Sum_probs=148.2
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
..++|+..+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~------- 113 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ------- 113 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-------
Confidence 346788899999999999999995 468899999997432 223456789999999999999999998774
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.+...++||||+++|+|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|
T Consensus 114 -~~~~~~lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 114 -DDKYLYMVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred -cCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEe
Confidence 45568999999999999999864 247888889999999999999998 7999999999999999999999999
Q ss_pred CCCCccccCCC---------Cc-------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRN---------TL-------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~---------~~-------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||++....... +. ... +.++|||||||++|||++|.
T Consensus 186 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~ 244 (370)
T cd05596 186 FGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 244 (370)
T ss_pred ccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCC
Confidence 99987543211 00 112 67899999999999999985
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=263.26 Aligned_cols=178 Identities=17% Similarity=0.298 Sum_probs=150.2
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+++. .++..||+|.+.... ....+.+.+|++++++++||||+++++++. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 75 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--------SD 75 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE--------EC
Confidence 36788899999999999999995 468899999987542 223467999999999999999999999885 33
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 76 GEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred CEEEEEeecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 568999999999999999964 34588999999999999999999973 3699999999999999999999999999
Q ss_pred CccccCCCC--------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT--------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~--------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ + +.. +.++|||||||++|||+||.
T Consensus 151 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~ 199 (331)
T cd06649 151 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR 199 (331)
T ss_pred cccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 875432111 0 333 88999999999999999984
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=268.30 Aligned_cols=182 Identities=13% Similarity=0.193 Sum_probs=151.4
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
.++....++|+..+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-- 113 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 113 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 34445567899999999999999999995 468899999986422 223456788999999999999999998874
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
.+...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 114 ------~~~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ 180 (371)
T cd05622 114 ------DDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGH 180 (371)
T ss_pred ------cCCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCC
Confidence 44668999999999999999864 347888899999999999999998 79999999999999999999
Q ss_pred eEEeCCCCCccccCCC---------Cc---------c----CC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRN---------TL---------S----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~---------~~---------~----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++...... +. . .. +.++|||||||++|||++|+
T Consensus 181 ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~ 244 (371)
T cd05622 181 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 244 (371)
T ss_pred EEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCC
Confidence 9999999987543211 00 1 12 67999999999999999985
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=261.03 Aligned_cols=170 Identities=21% Similarity=0.292 Sum_probs=141.9
Q ss_pred CccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+.||+|+||.||+++. .+++.||||+++... ......+.+|+++++.++||||+++++++. .+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--------~~~ 73 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ--------TGG 73 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe--------cCC
Confidence 6799999999999984 357899999997532 223356788999999999999999998875 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+||||+++|+|.+++.. ...+.+..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 74 KLYLILEYLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred eEEEEEeCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 68999999999999999964 4457888899999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... + +.. +.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 197 (323)
T cd05584 148 KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGA 197 (323)
T ss_pred eecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCC
Confidence 64321110 0 223 78999999999999999984
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=258.85 Aligned_cols=177 Identities=21% Similarity=0.364 Sum_probs=147.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+++++.++||||+++++++. ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~ 75 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH--------TK 75 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe--------cC
Confidence 367889999999999999999954 688999999875432 23356788999999999999999999875 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ ++|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 76 ~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 76 ETLTLVFEYVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred CeEEEEEECCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCc
Confidence 56899999996 688888864 23568899999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... + . + .. +.++||||+||++|||+||.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 201 (303)
T cd07869 150 ARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGV 201 (303)
T ss_pred ceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 86532111 0 0 2 22 77899999999999999984
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=260.53 Aligned_cols=174 Identities=19% Similarity=0.395 Sum_probs=145.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCc----EEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS----RVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||.||+|++. +++ .||+|.++... ....+++.+|+.+++.++||||++++|+|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 46888999999999999999853 343 38999987432 2345678999999999999999999999852
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++|+||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 81 ---~~~~~v~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 81 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred ---CCceeeeecCCCCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEcc
Confidence 236899999999999999975 23458899999999999999999998 7999999999999999999999999
Q ss_pred CCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 605 YNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 605 fGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+++....... + ... +.++|||||||++|||++
T Consensus 153 fG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t 206 (316)
T cd05108 153 FGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 206 (316)
T ss_pred ccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHc
Confidence 999986532111 0 233 889999999999999987
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=268.06 Aligned_cols=179 Identities=21% Similarity=0.334 Sum_probs=147.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
..++|+..+.||+|+||.||+|+. .++..||||+++... ....+.+.+|++++..+ +||||++++++|.
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~--- 109 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT--- 109 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec---
Confidence 345688899999999999999973 235689999997433 22346788999999999 8999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------------------------------------------
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------------------------------------------- 551 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------------------------------------------- 551 (640)
.+...++||||+++|+|.++++....
T Consensus 110 -----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 110 -----VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred -----cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 34568999999999999999964211
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 552 -----------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 552 -----------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
...++|..+.+++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 261 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLA 261 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccc
Confidence 1257899999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 609 LPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 609 ~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+....... + +.. +.++|||||||++|||++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt 311 (375)
T cd05104 262 RDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 311 (375)
T ss_pred eeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHh
Confidence 75432110 1 233 889999999999999997
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=262.00 Aligned_cols=177 Identities=16% Similarity=0.214 Sum_probs=148.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|+.++..++|+||+++++++. .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ--------D 72 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe--------c
Confidence 4688899999999999999995 468899999997421 223456889999999999999999998874 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...|+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 73 ENNLYLVMDYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred CCeEEEEEecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECC
Confidence 4568999999999999999964 23458899999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCC---------c--------c------CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT---------L--------S------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~---------~--------~------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ . . .. +.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~ 205 (331)
T cd05597 148 SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGE 205 (331)
T ss_pred ceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCC
Confidence 9865422110 0 1 12 67899999999999999984
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=262.85 Aligned_cols=177 Identities=15% Similarity=0.182 Sum_probs=148.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+++. .+++.||+|.+.... ....+.+.+|+.++..++|+||+++++++. .
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--------~ 72 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ--------D 72 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------c
Confidence 4688899999999999999995 467899999987422 223355788999999999999999998874 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.++++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEecc
Confidence 45689999999999999999742 3468899999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCC---------c---------c-----CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT---------L---------S-----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~---------~---------~-----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . + .. +.++|||||||++|||++|+
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~ 205 (331)
T cd05624 148 SCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 205 (331)
T ss_pred ceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCC
Confidence 9865432110 0 1 23 77899999999999999985
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=265.83 Aligned_cols=176 Identities=18% Similarity=0.263 Sum_probs=151.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|++++..++||||+++++++. .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--------D 72 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee--------c
Confidence 3688889999999999999995 468999999997532 234467889999999999999999998774 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 73 EEHLYLVMEYMPGGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred CCeEEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCC
Confidence 4568999999999999999975 3568999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCC-------------------------------------Cc---------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRN-------------------------------------TL---------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~-------------------------------------~~---------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+++...... +. +.. +.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 997654322 00 233 8899999999999999998
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 227 ~ 227 (350)
T cd05573 227 F 227 (350)
T ss_pred C
Confidence 5
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=254.80 Aligned_cols=179 Identities=20% Similarity=0.322 Sum_probs=150.4
Q ss_pred cCCCCCCccccCCccceEEEEeC-----CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.+|+..+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------ 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA------ 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC------
Confidence 46778899999999999999742 4789999998765444456889999999999999999999987521
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQK--HRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCC
Confidence 23457999999999999999964 23458999999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||+++||++|+
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~ 208 (284)
T cd05081 153 GLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYS 208 (284)
T ss_pred cccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcC
Confidence 99886432111 0 233 88999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=266.04 Aligned_cols=176 Identities=18% Similarity=0.277 Sum_probs=148.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+++. .+++.||+|+++... ....+.+.+|++++..++||||+++++++. .
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--------~ 72 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--------D 72 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--------c
Confidence 3678889999999999999985 468899999997532 233467888999999999999999998774 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 73 KRNLYLIMEFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred CCEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeecc
Confidence 4568999999999999999964 4568999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCC-------------------------------------------CCc---------cCC-CCccceehhhHHH
Q 006570 607 IPLPSKVR-------------------------------------------NTL---------SFH-TDRSSLYKIILII 633 (640)
Q Consensus 607 la~~~~~~-------------------------------------------~~~---------~~~-~~~~DvwS~Gvvl 633 (640)
+++..... .+. +.. +.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 98643210 000 233 8899999999999
Q ss_pred HHHhhcC
Q 006570 634 CVITLCC 640 (640)
Q Consensus 634 ~elltG~ 640 (640)
|||+||+
T Consensus 227 yel~tG~ 233 (360)
T cd05627 227 YEMLIGY 233 (360)
T ss_pred eecccCC
Confidence 9999985
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=258.75 Aligned_cols=170 Identities=20% Similarity=0.274 Sum_probs=141.4
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+. .+++.||+|+++... ....+.+..|.+++..+ +||||+++++++. .....|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~--------~~~~~~ 72 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ--------TKDRLF 72 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE--------cCCeEE
Confidence 4699999999999995 457899999997542 22345677888888866 7999999999875 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~E~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 73 FVMEYVNGGDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999999999864 3468899999999999999999999 69999999999999999999999999998753
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~ 193 (321)
T cd05591 147 ILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ 193 (321)
T ss_pred ccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCC
Confidence 2111 00 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-29 Score=259.65 Aligned_cols=175 Identities=18% Similarity=0.225 Sum_probs=144.2
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
+|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|.+++..+ +|++|+++++++. .
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~ 72 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ--------T 72 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe--------c
Confidence 4777899999999999999854 57899999997542 12234567788888777 5888988888774 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 73 MDRLYFVMEYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCC
Confidence 4568999999999999999864 3468899999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++...... +. ... +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~ 198 (323)
T cd05616 147 MCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198 (323)
T ss_pred CceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCC
Confidence 987532110 10 333 88999999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-29 Score=253.74 Aligned_cols=182 Identities=21% Similarity=0.366 Sum_probs=145.7
Q ss_pred cCCCCCCccccCCccceEEEEe-C-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcC---CCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-T-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~ 523 (640)
++|+..+.||+|+||.||+|+. . ++..||+|.++... ......+.+|+++++.+ +||||++++++|.....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~-- 78 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT-- 78 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC--
Confidence 3688899999999999999985 3 46789999987543 22334566777777665 69999999998853221
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
......++||||++ |+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 79 -~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 79 -DRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred -CCCCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEc
Confidence 23456899999996 5999999752 23458999999999999999999998 799999999999999999999999
Q ss_pred CCCCCccccCCCC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... + ... +.++|||||||++|||++|+
T Consensus 153 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 206 (290)
T cd07862 153 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 206 (290)
T ss_pred cccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCC
Confidence 9999876432211 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=259.16 Aligned_cols=170 Identities=20% Similarity=0.215 Sum_probs=142.4
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|..++.++ +||||+++++++. .....+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~--------~~~~~~ 72 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ--------TESRLF 72 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE--------cCCEEE
Confidence 4689999999999995 468899999998542 22335678899999888 7999999999874 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~~g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 73 FVIEFVSGGDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 99999999999998864 3568999999999999999999998 79999999999999999999999999998742
Q ss_pred cCCC--------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... + + +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~ 193 (329)
T cd05588 147 IRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193 (329)
T ss_pred ccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCC
Confidence 1100 0 0 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=261.18 Aligned_cols=175 Identities=18% Similarity=0.232 Sum_probs=145.6
Q ss_pred CCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
+|++.+.||+|+||.||+++. .+++.||+|+++... ....+.+.+|++++..+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----- 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence 477789999999999999974 357899999997432 22345688899999999 5999999988764
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 76 ---~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 76 ---TEAKLHLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred ---cCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEE
Confidence 34568999999999999999964 4468999999999999999999998 79999999999999999999999
Q ss_pred eCCCCCccccCCC---------Cc---------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN---------TL---------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~---------~~---------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++...... +. + .. +.++|||||||++|||+||.
T Consensus 147 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~ 204 (332)
T cd05614 147 TDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGA 204 (332)
T ss_pred eeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCC
Confidence 9999987542111 00 2 22 77899999999999999984
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=259.80 Aligned_cols=175 Identities=18% Similarity=0.226 Sum_probs=143.8
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCc-ccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHR-HLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~~~~~~ 526 (640)
+|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+..|++++..++|+ +|+++++++. .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~ 72 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--------T 72 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE--------c
Confidence 4778899999999999999954 57899999997532 23346678899999999765 5777777664 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 73 MDRLYFVMEYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred CCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 4568999999999999999964 3468899999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCC--------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRN--------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~--------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++...... + + +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~ 198 (324)
T cd05587 147 MCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198 (324)
T ss_pred cceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCC
Confidence 986431110 0 0 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=260.00 Aligned_cols=173 Identities=22% Similarity=0.289 Sum_probs=142.5
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHH---hcCCCcccceeeeEEEecccCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELL---SKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++ +.++||||+++++++.
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-------- 72 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-------- 72 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE--------
Confidence 55678999999999999984 468999999997542 22335566676654 5678999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...|+||||+++|+|..+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 73 ~~~~~~lv~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 73 TEDHVCFVMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred cCCEEEEEEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcc
Confidence 34568999999999999988853 458999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||++|.
T Consensus 146 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~ 198 (324)
T cd05589 146 GLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGE 198 (324)
T ss_pred cCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCC
Confidence 99875321110 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=262.94 Aligned_cols=179 Identities=20% Similarity=0.301 Sum_probs=146.9
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+|+. .++..||||+++... .....++.+|++++++++||||+++++++..... ....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---~~~~ 77 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR---REFK 77 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCC---CCCc
Confidence 477789999999999999994 568999999987432 2234568899999999999999999998863221 1234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+|||||+ ++|.+++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 78 DIYVVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred eEEEEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccc
Confidence 5899999995 699999864 4468999999999999999999999 79999999999999999999999999999
Q ss_pred ccccCCC-----------C--c-------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN-----------T--L-------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~-----------~--~-------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... + + + .. +.++|||||||++|||+||+
T Consensus 151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~ 205 (338)
T cd07859 151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205 (338)
T ss_pred cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCC
Confidence 7542110 0 0 1 23 78999999999999999984
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-29 Score=257.74 Aligned_cols=170 Identities=19% Similarity=0.265 Sum_probs=139.6
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+. .+++.||+|+++... ....+.+..|.+++... +||||+++++++. .+...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~--------~~~~~~ 72 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ--------TKEHLF 72 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE--------cCCEEE
Confidence 4699999999999995 457899999997542 22334556677777654 8999999998874 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~gg~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 73 FVMEYLNGGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999999999864 3468899999999999999999999 79999999999999999999999999999753
Q ss_pred cCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... . +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~ 193 (316)
T cd05592 147 MNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193 (316)
T ss_pred CCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCC
Confidence 21110 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=259.30 Aligned_cols=170 Identities=19% Similarity=0.203 Sum_probs=141.6
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++. .....+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~--------~~~~~~ 72 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ--------TESRLF 72 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE--------eCCEEE
Confidence 4699999999999995 467899999997542 22335577888888776 8999999999875 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~E~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 73 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 99999999999998864 3468999999999999999999998 79999999999999999999999999998753
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (329)
T cd05618 147 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193 (329)
T ss_pred cCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCC
Confidence 2110 00 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=263.36 Aligned_cols=177 Identities=16% Similarity=0.214 Sum_probs=149.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||+||+++. .+++.||+|+++... ....+.+.+|+++++.++||||+++++++. .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~--------~ 72 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ--------D 72 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe--------c
Confidence 3688889999999999999994 468899999998542 223456889999999999999999998774 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 73 KDNLYLVMEYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred CCeEEEEECCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCC
Confidence 45689999999999999999752 3468999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCC---------c--------c------C-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT---------L--------S------F-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~---------~--------~------~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ . . . . +.++|||||||++|||++|.
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~ 206 (330)
T cd05601 148 SAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206 (330)
T ss_pred CCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCC
Confidence 9975432110 0 1 1 2 68899999999999999984
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-29 Score=260.64 Aligned_cols=178 Identities=17% Similarity=0.315 Sum_probs=149.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+++.. ++..+|+|.+..... ...+.+.+|++++++++||||+++++++. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 75 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--------SD 75 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE--------EC
Confidence 367889999999999999999954 688999998875422 23467899999999999999999999986 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ...+++.....++.+++.||+|||+. .+|+||||||+||++++++.+||+|||+
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 76 GEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred CEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 568999999999999999964 34588999999999999999999973 4799999999999999999999999999
Q ss_pred CccccCCC------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... + + +.. +.++|||||||++|||++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~ 199 (333)
T cd06650 151 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199 (333)
T ss_pred chhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 87542211 0 0 233 88999999999999999984
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=266.43 Aligned_cols=182 Identities=20% Similarity=0.263 Sum_probs=150.8
Q ss_pred CCCCccccCCccceEEEE-eCCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 454 DPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
...+.||+|+||.||+|+ ..+|+.||||.++... ....+.+.+|+++|++++|||||+++++-..... ........
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~--~~~~~~~v 93 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL--GLVTRLPV 93 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc--Ccccccce
Confidence 345789999999999999 5679999999998643 3456889999999999999999999986421110 00144568
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec--CCC--ceEEeCCCC
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KAL--TAKLSGYNI 607 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~--~~~--~~kl~DfGl 607 (640)
+|||||.+|||+..|++..+...+++.+.+.+..+++.||.|||+ .+|+||||||.||++- ++| ..||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 999999999999999987777889999999999999999999998 5999999999999983 333 579999999
Q ss_pred CccccCCCCc---------------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL---------------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~---------------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+..+..... . .. +..+|.|||||++||.+||.
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~ 221 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGE 221 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccC
Confidence 9988654321 2 33 88899999999999999994
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=260.18 Aligned_cols=177 Identities=15% Similarity=0.172 Sum_probs=147.2
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+++.. +++.+|+|++.... ....+.+.+|+.++..++|+||+++++++. .
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--------D 72 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe--------c
Confidence 36888899999999999999954 47889999986421 223355888999999999999999998774 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++++ ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~--~~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecc
Confidence 4568999999999999999974 23468899999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCC---------Cc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRN---------TL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~---------~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++...... +. ... +.++|||||||++|||++|.
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~ 205 (332)
T cd05623 148 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGE 205 (332)
T ss_pred hheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCC
Confidence 986532111 00 112 77999999999999999984
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=259.20 Aligned_cols=170 Identities=22% Similarity=0.294 Sum_probs=139.5
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHH-HHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||+||+|+. .+|+.||+|++.... ....+++..|.. +++.++||||+++++++. .....+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~--------~~~~~~ 72 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ--------TTEKLY 72 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe--------cCCEEE
Confidence 4699999999999984 568999999997542 122345555654 467789999999998774 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 73 FVLDFVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 99999999999998864 4568999999999999999999998 79999999999999999999999999998753
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~ 193 (325)
T cd05604 147 IAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred CCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCC
Confidence 2111 00 233 88999999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=251.97 Aligned_cols=176 Identities=21% Similarity=0.386 Sum_probs=146.3
Q ss_pred cCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|++.+.||+|+||.||+|++. .+..||+|.++.... ...+.+.+|+.++++++||||++++|++.
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------- 76 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-------- 76 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe--------
Confidence 46788899999999999999753 356899999975432 23457899999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+|++||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~df 151 (266)
T cd05064 77 RGNTMMIVTEYMSNGALDSFLRK--HEGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGF 151 (266)
T ss_pred cCCCcEEEEEeCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCC
Confidence 34568999999999999999974 23468999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCC-----------Cc-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 606 NIPLPSKVRN-----------TL-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 606 Gla~~~~~~~-----------~~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|.+....... .. ... +.++|||||||++||+++ |
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g 205 (266)
T cd05064 152 RRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYG 205 (266)
T ss_pred cccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCC
Confidence 9875432110 00 233 889999999999999775 5
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=259.19 Aligned_cols=170 Identities=20% Similarity=0.278 Sum_probs=143.7
Q ss_pred CccccCCccceEEEEe----CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 457 NLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
+.||+|+||.||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++. .....
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~~~~ 73 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ--------TEGKL 73 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE--------cCCEE
Confidence 5799999999999874 3578999999975432 23456778999999999999999998875 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 74 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 74 YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 999999999999999964 4568999999999999999999998 7999999999999999999999999999876
Q ss_pred ccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... . ... +.++|||||||++|||+||+
T Consensus 148 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~ 195 (318)
T cd05582 148 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGS 195 (318)
T ss_pred cCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCC
Confidence 532211 0 223 88999999999999999985
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-29 Score=257.58 Aligned_cols=170 Identities=22% Similarity=0.292 Sum_probs=138.7
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHH-HHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+. .+++.||+|++.... .....++.+|.. +++.++||||+++++++. ..+..|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~--------~~~~~~ 72 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ--------TAEKLY 72 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE--------cCCEEE
Confidence 4699999999999995 468899999997532 122344555554 678899999999998774 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 73 FVLDYVNGGELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred EEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 99999999999998864 4457888999999999999999998 79999999999999999999999999998753
Q ss_pred cCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... + +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (321)
T cd05603 147 VEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGL 193 (321)
T ss_pred CCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCC
Confidence 21110 0 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=254.34 Aligned_cols=176 Identities=15% Similarity=0.242 Sum_probs=146.8
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++. ..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 72 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR--------RR 72 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe--------cC
Confidence 36888999999999999999964 58899999997542 233467889999999999999999998874 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+..++||||++++.+..+.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 73 ~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 73 GKLYLVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred CEEEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 56899999999877765543 23468899999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++....... . +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~ 198 (287)
T cd07848 147 ARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ 198 (287)
T ss_pred cccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCC
Confidence 976532110 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=252.23 Aligned_cols=171 Identities=19% Similarity=0.253 Sum_probs=142.0
Q ss_pred cccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 459 ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
||+|+||+||+++. .+++.||+|.+..... ...+.+..|++++++++||||+++.+++. .....++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--------~~~~~~lv~ 72 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ--------TKTDLCLVM 72 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc--------CCCeEEEEE
Confidence 69999999999984 4688999999875322 22356788999999999999999988764 345689999
Q ss_pred EccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 535 EHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.....
T Consensus 73 e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 73 TIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred eCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 9999999998885422 34568999999999999999999998 7999999999999999999999999999875432
Q ss_pred CCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 614 RNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 614 ~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... + +.. +.++|||||||++|||++|.
T Consensus 150 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~ 194 (280)
T cd05608 150 GQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAAR 194 (280)
T ss_pred CCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 110 0 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=257.19 Aligned_cols=170 Identities=21% Similarity=0.275 Sum_probs=141.6
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||+||+|+. .+++.||||+++... ....+.+..|.+++... +||||+++++++. .....|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~--------~~~~~~ 72 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ--------TPDRLF 72 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE--------cCCEEE
Confidence 4689999999999995 468899999997532 23345677888888876 6999999998874 445689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 iv~Ey~~~g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 73 FVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred EEEcCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 99999999999999864 3468999999999999999999998 79999999999999999999999999998753
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (320)
T cd05590 147 IFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGH 193 (320)
T ss_pred CcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCC
Confidence 2111 00 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-29 Score=265.10 Aligned_cols=181 Identities=21% Similarity=0.346 Sum_probs=147.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
..++|+..+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+++++.+ +||||++++++|.
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~--- 112 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT--- 112 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec---
Confidence 345788899999999999999873 1245799999975432 2245688999999999 8999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccC--------------------------------------------------
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------------------------------------------- 550 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------------------------------------------- 550 (640)
.....++||||+++|+|.++++...
T Consensus 113 -----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (374)
T cd05106 113 -----HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV 187 (374)
T ss_pred -----CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence 3456899999999999999986421
Q ss_pred -----------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 551 -----------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 551 -----------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
....+++.++++++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~ 264 (374)
T cd05106 188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN 264 (374)
T ss_pred cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence 01347888999999999999999998 7999999999999999999999999999875422
Q ss_pred CCC------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 614 RNT------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 614 ~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
... + ... +.++|||||||++|||++ |.
T Consensus 265 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~ 312 (374)
T cd05106 265 DSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGK 312 (374)
T ss_pred CcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 110 1 233 889999999999999997 63
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=252.93 Aligned_cols=177 Identities=21% Similarity=0.231 Sum_probs=147.7
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+|+..+.||+|+||+||++.. .+++.||+|++.... ......+.+|++++++++||||+++++++. .+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 72 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE--------TK 72 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec--------CC
Confidence 367788999999999999994 568899999997532 122345778999999999999999998774 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 73 DALCLVLTLMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred CeEEEEEeccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 5689999999999999988642 23468999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . ... +.++||||+||++|||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~ 198 (285)
T cd05605 149 AVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198 (285)
T ss_pred ceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCC
Confidence 876432111 0 233 78899999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=248.02 Aligned_cols=175 Identities=17% Similarity=0.302 Sum_probs=148.2
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+++..++..+|+|.++.. ....+++.+|++++++++||||+++++++. .....
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 74 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCT--------QQKPL 74 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEc--------cCCCE
Confidence 346778899999999999999888889999988643 334578999999999999999999999884 34458
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.++++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.++.
T Consensus 75 ~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 75 YIVTEFMENGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccc
Confidence 9999999999999999742 2458999999999999999999998 7999999999999999999999999999875
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... + ... +.++||||||+++|||++ |
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g 198 (256)
T cd05114 150 VLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEG 198 (256)
T ss_pred cCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCC
Confidence 421110 0 223 789999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-29 Score=257.46 Aligned_cols=175 Identities=19% Similarity=0.226 Sum_probs=143.7
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~ 526 (640)
+|+..+.||+|+||+||+|+. .+++.||+|++.... ....+.+..|.+++..+. |++|+++++++. .
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~ 72 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ--------T 72 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe--------c
Confidence 366778999999999999984 468899999997532 223456778888888885 567777877664 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..|+||||+++|+|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 73 VDRLYFVMEYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccc
Confidence 4568999999999999999864 3568999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++...... +. +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~ 198 (323)
T cd05615 147 MCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 198 (323)
T ss_pred cccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCC
Confidence 987532111 10 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=257.19 Aligned_cols=170 Identities=22% Similarity=0.287 Sum_probs=139.0
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHH-HHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||+||+|+. .+|+.||+|++.... ....+++..|.. +++.++||||+++++++. .....+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~--------~~~~~~ 72 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ--------TADKLY 72 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE--------eCCEEE
Confidence 4699999999999995 468999999997532 122344555554 567899999999998774 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 73 FVLDYVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred EEEcCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 99999999999999964 4468899999999999999999998 79999999999999999999999999998753
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 147 IEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred ccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 2111 00 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=262.90 Aligned_cols=178 Identities=22% Similarity=0.334 Sum_probs=150.3
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
...++|.....||+|+||+|+++.. .+++.+|||.++++. ....+..+.|.+++... +||.++.++..+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f------ 438 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF------ 438 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc------
Confidence 3456788999999999999999995 458899999998753 34557788888888777 599999998755
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
++.+++|+||||+.||++..+.+ ...+++..+..||..|+.||+|||+ .+||+||||.+|||+|.+|.+||
T Consensus 439 --QT~~~l~fvmey~~Ggdm~~~~~----~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 439 --QTKEHLFFVMEYVAGGDLMHHIH----TDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred --ccCCeEEEEEEecCCCcEEEEEe----cccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEe
Confidence 47788999999999999655443 4569999999999999999999999 69999999999999999999999
Q ss_pred eCCCCCccccCCC-C-c---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN-T-L---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~-~-~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++..-... . . +.. +..+|.|||||+||||++|.
T Consensus 510 ADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq 565 (694)
T KOG0694|consen 510 ADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGE 565 (694)
T ss_pred cccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCC
Confidence 9999998653111 1 1 344 99999999999999999985
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=255.27 Aligned_cols=170 Identities=21% Similarity=0.312 Sum_probs=140.7
Q ss_pred CccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++... +||||+++++++. +.+..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~--------~~~~~~ 72 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ--------TKENLF 72 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE--------eCCEEE
Confidence 46899999999999954 57899999997542 22345567788888764 8999999999875 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 73 lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 73 FVMEYLNGGDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 99999999999999964 3468899999999999999999998 79999999999999999999999999998643
Q ss_pred cCCC--------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... + + +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~ 193 (316)
T cd05619 147 MLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ 193 (316)
T ss_pred CCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCC
Confidence 1110 0 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=252.30 Aligned_cols=172 Identities=32% Similarity=0.527 Sum_probs=142.3
Q ss_pred CCccccCCccceEEEEeC-----CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 456 TNLIGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+.||.|+||.||+|.+. .+..|+||.++.... ...+++.+|++.+++++||||++++|+|. ....
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~--------~~~~ 75 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI--------ENEP 75 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE--------SSSS
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc--------cccc
Confidence 467999999999999965 256899999965322 23578999999999999999999999997 2334
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.++++.. ....+++.++..|+.|+++||+|||+ .+++|+||+++||++++++.+||+|||++.
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~ 151 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSR 151 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGE
T ss_pred cccccccccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 89999999999999999863 34678999999999999999999999 689999999999999999999999999998
Q ss_pred cccCCCCc-------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 610 PSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 610 ~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
........ ... +.++||||||+++|||+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~ 201 (259)
T PF07714_consen 152 PISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTL 201 (259)
T ss_dssp ETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 76211110 233 8999999999999999993
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=262.89 Aligned_cols=170 Identities=17% Similarity=0.269 Sum_probs=140.0
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++|+||+++++++. .....
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~~ 147 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD--------HNGEI 147 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec--------cCCeE
Confidence 44568899999999999994 4689999999865432 23467899999999999999999999874 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+.. ...+..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.
T Consensus 148 ~lv~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~ 217 (353)
T PLN00034 148 QVLLEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRI 217 (353)
T ss_pred EEEEecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999986532 24677888999999999999998 6999999999999999999999999999876
Q ss_pred ccCCCC----------c------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNT----------L------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~----------~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... + +.. +.++|||||||++|||++|.
T Consensus 218 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~ 270 (353)
T PLN00034 218 LAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGR 270 (353)
T ss_pred cccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCC
Confidence 432110 0 111 45899999999999999984
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=272.34 Aligned_cols=178 Identities=15% Similarity=0.185 Sum_probs=148.7
Q ss_pred CCCCCCccccCCccceEEEEe-CC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.|...+.||+|+||.||+|.. .+ ++.||+|.+..........+.+|+++++.++||||+++++++. .++.
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~--------~~~~ 139 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK--------SDDK 139 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE--------ECCE
Confidence 377889999999999999984 34 6788999776544434456788999999999999999999885 3456
Q ss_pred EEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
.|+||||+++|+|.++++.. .....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla 216 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFS 216 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCc
Confidence 89999999999999988642 234568899999999999999999998 79999999999999999999999999999
Q ss_pred ccccCCC----------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN----------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~----------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... + + +.. +.++|||||||++|||+||.
T Consensus 217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~ 268 (478)
T PTZ00267 217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLH 268 (478)
T ss_pred eecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence 7653221 1 0 233 88999999999999999984
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=263.93 Aligned_cols=170 Identities=17% Similarity=0.252 Sum_probs=143.7
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
..+|+..+.||+|+||.||+|+ ..+++.||+|... .+.+.+|++++++++||||+++++++. ...
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~--------~~~ 156 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT--------YNK 156 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE--------ECC
Confidence 3579999999999999999999 4568899999654 245789999999999999999999875 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+. ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 157 ~~~lv~e~~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 157 FTCLILPRYK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred eeEEEEecCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 5899999995 699998864 3468899999999999999999998 69999999999999999999999999999
Q ss_pred ccccCCC---------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN---------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~---------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... +. +.. +.++|||||||++|||+||.
T Consensus 230 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~ 280 (391)
T PHA03212 230 CFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280 (391)
T ss_pred cccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 6432110 00 233 88999999999999999984
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=272.41 Aligned_cols=192 Identities=15% Similarity=0.205 Sum_probs=154.6
Q ss_pred HHHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.....++|.+.+.||+|+||+||+|+ ..+++.||||++..... .....+.+|+..+..++|+|++++++.+......
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 34445789999999999999999998 45789999999875432 2345678899999999999999988776533222
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.+.....+++||||+++|+|.++++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEE
Confidence 2222234789999999999999997532 34568999999999999999999999 7999999999999999999999
Q ss_pred EeCCCCCccccCCC----------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN----------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~----------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++...... + + +.. +.++|||||||++|||++|.
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~ 242 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99999987643210 0 0 233 88999999999999999984
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=247.29 Aligned_cols=175 Identities=18% Similarity=0.311 Sum_probs=148.0
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+..++..+|+|.++... ...+++.+|++++++++||||+++++++. .....
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 74 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT--------KQRPI 74 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEc--------cCCCc
Confidence 3567788999999999999998777789999987432 34578999999999999999999999884 23457
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++|+||||+||++++++.+||+|||.++.
T Consensus 75 ~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~ 149 (256)
T cd05113 75 YIVTEYMSNGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRY 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCcccee
Confidence 9999999999999999742 2368999999999999999999998 7999999999999999999999999999875
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... . +.. +.++|||||||++|||++ |
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g 198 (256)
T cd05113 150 VLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLG 198 (256)
T ss_pred cCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCC
Confidence 422110 0 233 789999999999999998 6
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=249.55 Aligned_cols=178 Identities=21% Similarity=0.407 Sum_probs=153.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+..+|+..+.||+|+||.||+|...++..+|+|.+........+++.+|+++++.++||||+++++++. ...
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 75 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS--------VGE 75 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe--------cCC
Confidence 445688889999999999999998778999999998665545678999999999999999999999875 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.++++.. ....+++.+++.++.+++.|++|||+ .+++||||||+||++++++.+||+|||.+
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~ 151 (261)
T cd05148 76 PVYIITELMEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLA 151 (261)
T ss_pred CeEEEEeecccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccch
Confidence 689999999999999999753 34568999999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCC----------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 609 LPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 609 ~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
........ . ... +.++||||||++++||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~ 199 (261)
T cd05148 152 RLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199 (261)
T ss_pred hhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHc
Confidence 76532210 0 233 788999999999999998
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=255.95 Aligned_cols=170 Identities=19% Similarity=0.197 Sum_probs=141.9
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+. .+++.||+|+++.... ...+.+.+|+.++.++ +||||+++++++. .....+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~~~~~~ 72 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ--------TTSRLF 72 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE--------eCCEEE
Confidence 4699999999999995 4578999999985422 2335678899999888 6999999998774 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 73 LVIEYVNGGDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 99999999999998864 3468999999999999999999999 79999999999999999999999999998753
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~ 193 (327)
T cd05617 147 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR 193 (327)
T ss_pred cCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCC
Confidence 1110 00 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=254.62 Aligned_cols=170 Identities=21% Similarity=0.299 Sum_probs=140.5
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+. .+|+.||+|+++... ....+.+..|.+++... +||||+++++++. .....|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------~~~~~~ 72 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ--------TKEHLF 72 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE--------eCCEEE
Confidence 4699999999999995 468899999997542 22345567788887754 8999999998874 345789
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 73 FVMEFLNGGDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEECCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999999999864 3468899999999999999999998 79999999999999999999999999998643
Q ss_pred cCC--------CCc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVR--------NTL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~--------~~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... .+. +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~ 193 (316)
T cd05620 147 VFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ 193 (316)
T ss_pred ccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCC
Confidence 110 000 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=267.70 Aligned_cols=184 Identities=18% Similarity=0.279 Sum_probs=146.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...+|+..+.||+|+||.||+|+. .+++.||||++.... ....+|+.+++.++||||+++++++.....+..+..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 345799999999999999999995 468899999886332 345679999999999999999998754322222233
Q ss_pred CeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGY 605 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~Df 605 (640)
..+++||||+++ ++.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence 457799999975 788777532 234568999999999999999999998 799999999999999966 47999999
Q ss_pred CCCccccCCCC---------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT---------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~---------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + + .. +.++|||||||++|||+||.
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99975432111 0 2 23 88999999999999999984
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=262.28 Aligned_cols=179 Identities=21% Similarity=0.358 Sum_probs=146.6
Q ss_pred HhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCC-CcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~ 520 (640)
..++|.+.+.||+|+||.||+|+.. .+..||||+++.... ...+.+.+|++++++++ ||||++++++|.
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~--- 111 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT--- 111 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc---
Confidence 3567888999999999999999842 134699999975432 23467899999999996 999999999985
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------------------------------------------
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------------------------------------------- 551 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------------------------------------------- 551 (640)
.....++|||||++|+|.++++....
T Consensus 112 -----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 112 -----KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred -----cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 34568999999999999999864210
Q ss_pred --------------------------------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC
Q 006570 552 --------------------------------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (640)
Q Consensus 552 --------------------------------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 587 (640)
...+++..+..++.|+++||+|||+ .+|+||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~di 263 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDL 263 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCC
Confidence 1247888999999999999999998 79999999
Q ss_pred CCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 588 KTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 588 k~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||++
T Consensus 264 kp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 334 (400)
T cd05105 264 AARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334 (400)
T ss_pred ChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999999875422110 0 233 889999999999999986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=247.75 Aligned_cols=176 Identities=18% Similarity=0.363 Sum_probs=149.8
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|...++..||+|.+.... ...+.+.+|++++++++|+||+++++++. .+...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 76 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT--------KEEPI 76 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc--------CCCCc
Confidence 5678889999999999999998788899999986432 23578999999999999999999998774 34558
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
+++|||+++|+|.++++.. ....+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 152 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARV 152 (261)
T ss_pred EEEEecCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCcccee
Confidence 9999999999999999752 34568899999999999999999998 7999999999999999999999999999976
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... + ... +.++|||||||++|||+| |
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g 201 (261)
T cd05072 153 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYG 201 (261)
T ss_pred cCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccC
Confidence 532110 0 223 778999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=262.31 Aligned_cols=175 Identities=22% Similarity=0.309 Sum_probs=149.5
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-C-----cccceeeeEEEecccCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-H-----RHLVSILGHCILTYQDHP 524 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~g~~~~~~~~~~ 524 (640)
+|.+.+.||+|+||.|.||. ..+++.||||+++... ....+-..|+.+|..++ | -|+|++++|+.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~------- 258 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY------- 258 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc-------
Confidence 68889999999999999999 6679999999998543 23456678999999986 4 39999999986
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC--CceEE
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--LTAKL 602 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--~~~kl 602 (640)
..++.|||+|.++. +|+++++.. +...++...+..|+.||+.||.+||+ .+|||+||||+|||+.+- ..+||
T Consensus 259 -fr~HlciVfELL~~-NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 259 -FRNHLCIVFELLST-NLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred -cccceeeeehhhhh-hHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeE
Confidence 34668999999976 999999873 45669999999999999999999998 799999999999999654 47999
Q ss_pred eCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||.|......... +.. +.+.||||||||+.||+||.
T Consensus 333 IDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~ 385 (586)
T KOG0667|consen 333 IDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE 385 (586)
T ss_pred EecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc
Confidence 999999876543322 566 99999999999999999993
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=248.52 Aligned_cols=170 Identities=19% Similarity=0.222 Sum_probs=141.4
Q ss_pred cccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 459 ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
||+|+||.||+++. .+|+.||+|++.... ....+.+..|++++++++||||+++++++. .+...++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~--------~~~~~~lv~ 72 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE--------SKTHLCLVM 72 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe--------cCCeEEEEE
Confidence 69999999999985 468999999986432 122345667999999999999999988774 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 73 e~~~g~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 73 SLMNGGDLKYHIYNV-GERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred ecCCCCCHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 999999999988642 33458899999999999999999998 79999999999999999999999999998754321
Q ss_pred CC-------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 615 NT-------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 615 ~~-------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.. . +.. +.++||||+||++|||++|.
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~ 191 (277)
T cd05607 149 KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191 (277)
T ss_pred ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCC
Confidence 11 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=254.92 Aligned_cols=170 Identities=22% Similarity=0.273 Sum_probs=137.6
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHH-HHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||+||+|+. .+++.||+|++.... ......+..|.. +++.++||||+++++++. .....+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~--------~~~~~~ 72 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ--------TADKLY 72 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE--------cCCeEE
Confidence 4699999999999995 457889999997532 122234444444 567889999999998874 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+.+.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 73 FVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999999999964 3457788889999999999999998 79999999999999999999999999998753
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (325)
T cd05602 147 IEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred ccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCC
Confidence 2111 00 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=246.84 Aligned_cols=176 Identities=18% Similarity=0.298 Sum_probs=149.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|+..+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++. .+..
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~--------~~~~ 80 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL--------SREK 80 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE--------eCCE
Confidence 4688899999999999999994 578899999997654444567889999999999999999999885 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.++++. ...+++.++..++.|++.|++|||+ .+|+||||||+||++++++.+||+|||++.
T Consensus 81 ~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~ 154 (267)
T cd06646 81 LWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAA 154 (267)
T ss_pred EEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccce
Confidence 8999999999999999864 3468999999999999999999998 799999999999999999999999999987
Q ss_pred cccCCCC----------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . ... +.++|||||||++|||++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~ 206 (267)
T cd06646 155 KITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQ 206 (267)
T ss_pred eecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCC
Confidence 5422110 0 112 67899999999999999984
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=248.21 Aligned_cols=181 Identities=16% Similarity=0.318 Sum_probs=144.8
Q ss_pred CCCCccccCCccceEEEEeCC-Cc--EEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 454 DPTNLIGEGSQGQLYKGFLTD-GS--RVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.+.+.||+|+||.||+|+..+ +. .||+|.++... ....+.+.+|+++++.++||||++++++|...... ....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES--EGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc--cCCC
Confidence 457889999999999999654 33 59999887532 22346788999999999999999999988632221 1223
Q ss_pred eEEEEEEccCCCCHhHHhhccC---CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
..++||||+++|+|.+++...+ ....+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCC
Confidence 5789999999999999884321 23458899999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|+++....... . ... +.++|||||||++|||+++
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~ 210 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATR 210 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcC
Confidence 99876532110 0 223 8899999999999999984
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=246.95 Aligned_cols=177 Identities=20% Similarity=0.383 Sum_probs=150.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++. ....
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT--------LEEP 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe--------cCCC
Confidence 45688889999999999999998777899999987543 34578999999999999999999999875 3445
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++++|.+++.... ...+++..+..++.+++.|+.|||+ .+++||||||+||++++++.+||+|||+++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred eeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 899999999999999997522 3468999999999999999999998 799999999999999999999999999987
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
....... + +.. +.++||||||++++||+| |
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g 201 (261)
T cd05068 152 VIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred EccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcC
Confidence 5432110 0 223 789999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=248.16 Aligned_cols=175 Identities=21% Similarity=0.332 Sum_probs=142.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCc----EEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGS----RVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||+||+|+. .+++ .+++|.+..... ...+++..|+..+++++||||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------- 79 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------- 79 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-------
Confidence 3567789999999999999985 3454 477777753322 22356778888999999999999999873
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+...++++||+++|+|.++++. ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|
T Consensus 80 --~~~~~~i~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 80 --GASLQLVTQLSPLGSLLDHVRQ--HRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred --CCccEEEEEeCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcC
Confidence 2336899999999999999974 23468999999999999999999998 7999999999999999999999999
Q ss_pred CCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... . ... +.++|||||||++||++| |
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g 208 (279)
T cd05111 153 FGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYG 208 (279)
T ss_pred CccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCC
Confidence 999975422110 0 233 888999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=257.48 Aligned_cols=176 Identities=23% Similarity=0.386 Sum_probs=151.9
Q ss_pred HhcCCCCCCccccCCccceEEEEeCC---C--cEEEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTD---G--SRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
..+..+..++||.|.||.||+|.+.+ | -.||||.-+.+ .....+.|..|.-+|+.++|||||+++|+|.
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~----- 461 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV----- 461 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-----
Confidence 34455667899999999999998533 3 35999988863 4556789999999999999999999999995
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
..+.|||||.++-|.|.+||+. +...++......++.|++.||+|||+ .++|||||.++|||+...--+|+
T Consensus 462 ----e~P~WivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKL 532 (974)
T KOG4257|consen 462 ----EQPMWIVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKL 532 (974)
T ss_pred ----ccceeEEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeee
Confidence 3458999999999999999985 45568888999999999999999999 79999999999999999999999
Q ss_pred eCCCCCccccCCCCc------------------cCC-CCccceehhhHHHHHHhh
Q 006570 603 SGYNIPLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 603 ~DfGla~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+|||+++..+....+ -++ +.++|||-|||.+||++.
T Consensus 533 aDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~ 587 (974)
T KOG4257|consen 533 ADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILS 587 (974)
T ss_pred cccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHH
Confidence 999999987665443 233 999999999999999975
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=257.49 Aligned_cols=181 Identities=20% Similarity=0.340 Sum_probs=146.9
Q ss_pred hcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
.++|++.+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|++++.++ +|+||++++++|..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~--- 82 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK--- 82 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec---
Confidence 346888999999999999999632 247899999874322 1235678899999999 89999999998852
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCC--------------------------------------------------
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------------------------------------------- 551 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 551 (640)
.+...+++|||+++|+|.+++.....
T Consensus 83 ----~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (337)
T cd05054 83 ----PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEE 158 (337)
T ss_pred ----CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhccc
Confidence 34568999999999999999864211
Q ss_pred --------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCC-------
Q 006570 552 --------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------- 616 (640)
Q Consensus 552 --------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------- 616 (640)
...++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.......
T Consensus 159 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~ 235 (337)
T cd05054 159 DEEGDELYKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 235 (337)
T ss_pred chhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCC
Confidence 1368999999999999999999998 6999999999999999999999999999976421110
Q ss_pred -----c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 617 -----L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 617 -----~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
+ +.. +.++|||||||++|||++ |.
T Consensus 236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~ 273 (337)
T cd05054 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGA 273 (337)
T ss_pred CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCC
Confidence 0 233 889999999999999997 63
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=244.71 Aligned_cols=173 Identities=18% Similarity=0.315 Sum_probs=146.8
Q ss_pred CCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+|+..+.||+|+||.||+|+..++..+|+|.+.... ...+++.+|++++++++||||+++++++. .....+
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~~ 75 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT--------KQRPIF 75 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc--------CCCceE
Confidence 467789999999999999998777789999986432 34567889999999999999999999874 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++++|.++++.. ...+++..++.++.|++.|++|||+ .+++||||||+||++++++.+||+|||+++..
T Consensus 76 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~ 150 (256)
T cd05059 76 IVTEYMANGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYV 150 (256)
T ss_pred EEEecCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceec
Confidence 999999999999999742 3468999999999999999999998 69999999999999999999999999998754
Q ss_pred cCCC-----------Cc-------cCC-CCccceehhhHHHHHHhh
Q 006570 612 KVRN-----------TL-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 612 ~~~~-----------~~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
.... .+ +.. +.++||||||+++|||++
T Consensus 151 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~ 196 (256)
T cd05059 151 LDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFS 196 (256)
T ss_pred ccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhc
Confidence 2211 01 233 789999999999999998
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=252.76 Aligned_cols=170 Identities=21% Similarity=0.267 Sum_probs=141.9
Q ss_pred CccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|.+++..+ +||||+++++++. .....+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~--------~~~~~~ 72 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ--------TKDRLF 72 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE--------cCCEEE
Confidence 46999999999999954 57899999997542 22345677888888887 7999999999874 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 73 FVMEYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 99999999999999864 3468999999999999999999998 79999999999999999999999999998653
Q ss_pred cCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... +. +.. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~ 193 (318)
T cd05570 147 ILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQ 193 (318)
T ss_pred CcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCC
Confidence 1111 00 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=245.31 Aligned_cols=175 Identities=22% Similarity=0.384 Sum_probs=147.5
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|++.+.||+|+||.||+|+..+...||+|+++... ...+++.+|++++++++||||+++++++. ....
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~---------~~~~ 75 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------EEPI 75 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC---------CCCc
Confidence 5688899999999999999997766789999997532 34568999999999999999999998752 2346
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.++.
T Consensus 76 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~ 151 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL 151 (262)
T ss_pred EEEEEcCCCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceee
Confidence 8999999999999999752 23457899999999999999999998 7999999999999999999999999999875
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
...... + ... +.++|||||||++|||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~ 199 (262)
T cd05071 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 199 (262)
T ss_pred ccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcC
Confidence 432110 0 233 7899999999999999993
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=247.88 Aligned_cols=175 Identities=22% Similarity=0.370 Sum_probs=146.5
Q ss_pred CCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
|+..+.||+|+||+||++.. .++..||+|.++.... ...+.+.+|++++++++||||+++++++... .
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~ 79 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ------G 79 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------C
Confidence 37789999999999988652 3578899999875432 2456788999999999999999999987521 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecc
Confidence 3457999999999999999964 348999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . ... +.++||||||++++||+|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~ 207 (283)
T cd05080 153 LAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC 207 (283)
T ss_pred cccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence 9876532111 0 233 88999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=245.78 Aligned_cols=176 Identities=16% Similarity=0.337 Sum_probs=148.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|+..+.||+|+||.||+|.. .+++.||+|+++.. ....+++.+|++++++++||||+++++++. ....
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 76 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--------REPP 76 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEc--------CCCC
Confidence 3467788999999999999995 45889999998743 233567899999999999999999999885 3345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ....+++..++.++.|+++||+|||+ .+++||||||+||++++++.+||+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 77 FYIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred cEEEEEeCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 79999999999999999752 23468999999999999999999998 699999999999999999999999999987
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
....... + +.. +.++|||||||++|||++ |
T Consensus 153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 153 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred ccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence 6532210 1 233 788999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-29 Score=255.50 Aligned_cols=177 Identities=20% Similarity=0.305 Sum_probs=152.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|...+.+|+|+||.++..++ .++..+++|.+..... ..++...+|+.++++++|||||.+.+.+.. ++
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~-------~~ 76 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEE-------DG 76 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhc-------CC
Confidence 5678889999999999999985 3577899999976543 234578899999999999999999988752 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...+|||+||+||++.+.+.+.+ ...+++..+.+++.|++.|+.|||+ ..|+|||||+.||+++.+..+||+|||+
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhh
Confidence 44899999999999999998633 5778999999999999999999997 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------cCC-CCccceehhhHHHHHHhh
Q 006570 608 PLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 608 a~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
|+........ +.. +.|+||||+||++|||++
T Consensus 153 aK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~ 201 (426)
T KOG0589|consen 153 AKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCT 201 (426)
T ss_pred hhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHh
Confidence 9988665411 444 999999999999999986
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-28 Score=252.41 Aligned_cols=176 Identities=19% Similarity=0.364 Sum_probs=146.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||.||+|+. .+++.||+|.++... ......+.+|++++++++||||+++++++. .+.
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 77 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH--------TDK 77 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe--------eCC
Confidence 5688889999999999999985 467899999997543 223456788999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 78 SLTLVFEYLDK-DLKQYMDD--CGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred eEEEEEeCCCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccc
Confidence 68999999975 89888864 23457899999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC----------c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... . ... +.++|||||||++|||+||.
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~ 202 (309)
T cd07872 152 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202 (309)
T ss_pred eecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 75321110 0 123 78999999999999999984
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=248.53 Aligned_cols=177 Identities=21% Similarity=0.328 Sum_probs=145.6
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||.||+|+. .++..||+|.++.... ...+++.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------- 77 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT------- 77 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-------
Confidence 4567789999999999999983 2457899999974322 22357889999999999999999999875
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC--------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK--------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~ 590 (640)
.+...++||||+++|+|.+++.... ....+++.+.+.++.|++.||+|||+ .+++||||||+
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~ 153 (283)
T cd05090 78 -QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAAR 153 (283)
T ss_pred -cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccc
Confidence 3455899999999999999985321 12357899999999999999999998 69999999999
Q ss_pred ceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 591 NILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 591 NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||++++++.+||+|||+++....... + +.. +.++|||||||++|||++
T Consensus 154 nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~ 221 (283)
T cd05090 154 NILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221 (283)
T ss_pred eEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHc
Confidence 99999999999999999975422110 0 233 889999999999999998
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-29 Score=253.51 Aligned_cols=175 Identities=19% Similarity=0.339 Sum_probs=151.2
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.|+..+.||+|+||.||||. ...++.||+|++...... ..+++++|+.++..++++||.+.||.++ .+..
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl--------~g~~ 85 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL--------KGTK 85 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee--------eccc
Confidence 46667899999999999999 456899999999876443 4578999999999999999999999887 4566
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
+|++||||.+|++.+.++. ...+++..+.-|.+++..|+.|||. .+.+|||||+.|||+..+|.+|++|||.+.
T Consensus 86 LwiiMey~~gGsv~~lL~~---~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKS---GNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAG 159 (467)
T ss_pred HHHHHHHhcCcchhhhhcc---CCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceee
Confidence 8999999999999999953 4455888888999999999999999 699999999999999999999999999997
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.|+||||+||+.+||++|.
T Consensus 160 ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~Ge 208 (467)
T KOG0201|consen 160 QLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGE 208 (467)
T ss_pred eeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCC
Confidence 76443221 223 99999999999999999984
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=274.48 Aligned_cols=179 Identities=18% Similarity=0.347 Sum_probs=148.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+. .+++.||+|++..... ...+++.+|++++++++||||+++++++. .
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~--------d 73 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS--------D 73 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe--------e
Confidence 4688899999999999999995 4589999999975322 22467899999999999999999999885 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC--------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK--------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
++..++||||+++|+|.+++.... .....++..++.++.|+++||+|||+ .+|+||||||+||+++.++
T Consensus 74 ~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 74 GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFG 150 (932)
T ss_pred CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCC
Confidence 456899999999999999986421 12345678889999999999999998 7999999999999999999
Q ss_pred ceEEeCCCCCccccCC--------------------------CCc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVR--------------------------NTL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~--------------------------~~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++..... .+. +.. +.++|||||||++|||+||.
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~ 228 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLS 228 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCC
Confidence 9999999999765100 000 233 88999999999999999984
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=248.47 Aligned_cols=180 Identities=16% Similarity=0.328 Sum_probs=147.1
Q ss_pred HhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
..++|+..+.||+|+||.||+|... ++..||||++..... ....++.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 4567889999999999999998743 256799998864321 23456889999999999999999999874
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCC-------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
.+...++||||+++|+|.++++.... ...+++..+..++.|++.||+|||+ .+++||||||+||++
T Consensus 80 ----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~ 152 (277)
T cd05062 80 ----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV 152 (277)
T ss_pred ----CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEE
Confidence 34568999999999999999975221 2346788999999999999999998 699999999999999
Q ss_pred cCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 595 DKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++++.+||+|||+++....... + +.. +.++|||||||++|||+++
T Consensus 153 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 217 (277)
T cd05062 153 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 217 (277)
T ss_pred cCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcC
Confidence 9999999999999864321110 0 233 8899999999999999984
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=259.26 Aligned_cols=179 Identities=17% Similarity=0.288 Sum_probs=146.2
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+++. .+++.||||++.... ....+++.+|+++++.++||||+++++++..... ....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~ 77 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHI---DPFE 77 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCc---cccc
Confidence 477889999999999999994 578999999986432 2234678899999999999999999998752211 1123
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+||||+. ++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 78 EIYVVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred eEEEEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccce
Confidence 6899999996 588888853 4568999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC-----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT-----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~-----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... + + .. +.++|||||||++|||++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 202 (372)
T cd07853 151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202 (372)
T ss_pred eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCC
Confidence 75432110 0 2 23 78899999999999999984
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-28 Score=244.34 Aligned_cols=181 Identities=16% Similarity=0.328 Sum_probs=146.5
Q ss_pred CCCCCccccCCccceEEEEeC-C---CcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-D---GSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
|++.+.||+|+||.||+|+.. + +..||+|+++.... ...+.+.+|++.++.++||||+++++++..... ...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASS--LQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCc--ccc
Confidence 566789999999999999853 2 36799999875432 223578999999999999999999998863211 123
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC---CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
....+++|||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEEC
Confidence 345799999999999999986422 23468999999999999999999998 699999999999999999999999
Q ss_pred CCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 604 GYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 604 DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
|||+++....... . ... +.++|||||||++|||++
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~ 210 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHh
Confidence 9999976432210 0 233 889999999999999998
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=247.82 Aligned_cols=178 Identities=21% Similarity=0.352 Sum_probs=148.5
Q ss_pred cCCCCCCccccCCccceEEEEeCC------CcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|...+.||+|+||.||+|+..+ +..||||.++..... ..+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------ 78 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT------ 78 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe------
Confidence 457778999999999999998532 478999999754333 3578999999999999999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccC-----------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWK-----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.+...++||||+++|+|.++++... ....+++.++..++.|++.|++|||+ .+++||||||+||
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~ni 153 (280)
T cd05049 79 --EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNC 153 (280)
T ss_pred --cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceE
Confidence 3356899999999999999997532 13457899999999999999999998 6999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCC------C------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRN------T------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~------~------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+++.++.+||+|||+++...... . + +.. +.++|||||||++|||++ |
T Consensus 154 li~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g 221 (280)
T cd05049 154 LVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYG 221 (280)
T ss_pred EEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcC
Confidence 99999999999999987542111 0 0 233 889999999999999998 6
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-28 Score=247.50 Aligned_cols=176 Identities=18% Similarity=0.223 Sum_probs=146.4
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|+..+.||+|+||+||+|+. .+++.||+|.+.... ....+.+.+|++++++++|+|++++.+++. .++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--------~~~ 73 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE--------TKD 73 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe--------cCC
Confidence 55668899999999999984 568899999987532 122345788999999999999999988774 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 74 ALCLVLTIMNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEeccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 689999999999999988642 23468999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC-------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT-------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~-------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . +.. +.++|||||||++|||++|+
T Consensus 150 ~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 198 (285)
T cd05632 150 VKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198 (285)
T ss_pred eecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCC
Confidence 65421110 0 233 88899999999999999985
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-29 Score=232.50 Aligned_cols=182 Identities=22% Similarity=0.395 Sum_probs=155.1
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-----C---ChHHHHHHHHHHhcC-CCcccceeee
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----H---LPQSLMQHVELLSKL-RHRHLVSILG 514 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~---~~~~~~~E~~~l~~l-~h~niv~l~g 514 (640)
+-+...+.|...+.+|+|..++|-++.+ .+|.++|+|++..... . ..+...+|+.+|+++ .||+|+.+.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 3455667889999999999999999984 5688999999875321 1 134567899999998 6999999998
Q ss_pred EEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
++. ....+++|+|.|+.|.|+|+|.. ...+++....+|++|+.+|++|||. .+|||||+||+|||+
T Consensus 91 ~ye--------s~sF~FlVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILl 156 (411)
T KOG0599|consen 91 VYE--------SDAFVFLVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILL 156 (411)
T ss_pred ecc--------CcchhhhhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheee
Confidence 773 56678999999999999999964 6679999999999999999999999 799999999999999
Q ss_pred cCCCceEEeCCCCCccccCCCCc---------------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 595 DKALTAKLSGYNIPLPSKVRNTL---------------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~~~~~---------------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
|++.++||+|||+|..+.+.... +.. +...|.||.||+||-++.||
T Consensus 157 ddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 157 DDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred ccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 99999999999999987654321 122 88999999999999999998
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=248.27 Aligned_cols=178 Identities=22% Similarity=0.374 Sum_probs=148.6
Q ss_pred cCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|.+.+.||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 77 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV------- 77 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-------
Confidence 5688889999999999999974 234569999987554444567999999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC----------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
.+...++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+ .+++||||||+||++
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili 153 (288)
T cd05093 78 -EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLV 153 (288)
T ss_pred -cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEE
Confidence 3456899999999999999997422 12358999999999999999999998 799999999999999
Q ss_pred cCCCceEEeCCCCCccccCCC------------Cc-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 595 DKALTAKLSGYNIPLPSKVRN------------TL-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~~~------------~~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++++.+||+|||+++...... .+ +.. +.++|||||||+++||+| |
T Consensus 154 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g 219 (288)
T cd05093 154 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 219 (288)
T ss_pred ccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999987542111 01 233 889999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-28 Score=244.22 Aligned_cols=176 Identities=18% Similarity=0.342 Sum_probs=147.8
Q ss_pred cCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|++.. ...||||.++.... ...+++.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 75 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-------- 75 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe--------
Confidence 468889999999999999998642 45799999875432 23467899999999999999999999875
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ....+++..++.++.|++.|++|||+ .+|+||||||+||++++++.+||+||
T Consensus 76 ~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 76 KSRPVMIITEYMENGSLDKFLRE--NDGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred cCCceEEEEEcCCCCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECcc
Confidence 34558999999999999999974 23468999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 606 NIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 606 Gla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+++....... + ... +.++||||||+++|||++ |
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g 205 (266)
T cd05033 151 GLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYG 205 (266)
T ss_pred chhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccC
Confidence 99986531100 0 233 789999999999999987 6
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=247.07 Aligned_cols=174 Identities=20% Similarity=0.401 Sum_probs=144.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCc----EEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGS----RVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||+||+|++ .+++ .||+|.++.... ...+++.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------ 80 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT------ 80 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC------
Confidence 4677889999999999999984 4454 489999875332 234678899999999999999999998851
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...+++|||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 81 ---~~~~l~~~~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~d 152 (279)
T cd05109 81 ---STVQLVTQLMPYGCLLDYVRE--NKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITD 152 (279)
T ss_pred ---CCcEEEEEcCCCCCHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECC
Confidence 236899999999999999974 23468999999999999999999998 7999999999999999999999999
Q ss_pred CCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 605 YNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 605 fGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+++....... . +.. +.++|||||||++|||+|
T Consensus 153 fG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t 206 (279)
T cd05109 153 FGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMT 206 (279)
T ss_pred CCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHc
Confidence 999876431110 0 233 788999999999999988
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=246.85 Aligned_cols=178 Identities=20% Similarity=0.381 Sum_probs=147.9
Q ss_pred CCCCCCccccCCccceEEEEe-----CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.|+..+.||+|+||.||+++. .++..||+|.++... ....+.+.+|++++++++|||++++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED------ 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC------
Confidence 467789999999999999974 347889999987542 23346789999999999999999999988521
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPR--NKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCC
Confidence 23457999999999999999964 23458999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||+||+
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~ 209 (284)
T cd05079 154 GLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYC 209 (284)
T ss_pred ccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCC
Confidence 99875432110 0 233 78999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=242.99 Aligned_cols=174 Identities=22% Similarity=0.409 Sum_probs=147.8
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|++.+.||+|+||.||+|...++..||+|.+..... ..+++.+|++++++++|+|++++++++. ....
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~---------~~~~ 75 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS---------EEPI 75 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC---------CCCc
Confidence 46778899999999999999988888999999975432 4578999999999999999999998762 2336
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
+++|||+++|+|.++++.. ....+++.+++.++.+++.||+|||+ .+++||||||+||++++++.+||+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~ 151 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARL 151 (260)
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeee
Confidence 8999999999999999752 23458999999999999999999998 6999999999999999999999999999875
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
...... + +.. +.++||||||+++|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 198 (260)
T cd05070 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 198 (260)
T ss_pred ccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHh
Confidence 432110 1 233 779999999999999998
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-29 Score=260.74 Aligned_cols=172 Identities=23% Similarity=0.370 Sum_probs=150.1
Q ss_pred CCCccccCCccceEEEEeCC--Cc--EEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 455 PTNLIGEGSQGQLYKGFLTD--GS--RVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
..++||+|.||.|++|.|.. |+ .||||+++.+... ...+|.+|+.+|.+++|||++++||+..+ ..
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~---------qp 184 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD---------QP 184 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc---------ch
Confidence 35889999999999999753 43 6999999876544 56899999999999999999999999862 45
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.+||||.++.|+|.+.|++ .....+--.....++.|||.||.||.. +++|||||.++|+|+-....+||+|||+.+
T Consensus 185 ~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmR 260 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMR 260 (1039)
T ss_pred hhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeeccccee
Confidence 7999999999999999987 455667778888999999999999998 799999999999999999999999999999
Q ss_pred cccCCCCc--------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 610 PSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 610 ~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
.+...... .+. +.++|||+|||++|||+|+
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFty 311 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTY 311 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhcc
Confidence 87655433 334 9999999999999999986
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=250.22 Aligned_cols=177 Identities=19% Similarity=0.305 Sum_probs=148.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+++. .++..+|+|.++.... ...+++.+|++++++++||||+++++++. .+.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY--------SDG 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--------eCC
Confidence 3688899999999999999984 4688899998875422 23356889999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.++++. ...+++..+..++.|+++||+|||+. .+++||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~ey~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 73 EISICMEHMDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEEEEeeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 68999999999999999964 35688999999999999999999973 48999999999999999999999999998
Q ss_pred ccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... +.. +.++|||||||++|||+||.
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 195 (308)
T cd06615 148 GQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195 (308)
T ss_pred ccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCC
Confidence 754321100 233 78899999999999999983
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=243.17 Aligned_cols=176 Identities=19% Similarity=0.369 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|...+++.||+|.+.... ...+++.+|++++++++|||++++++++. ...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------~~~ 74 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT---------QEP 74 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc---------cCC
Confidence 45688889999999999999998888999999987543 34578999999999999999999998752 234
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.+++|||+++|+|.+++... ....+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCccee
Confidence 79999999999999998652 34568999999999999999999998 799999999999999999999999999997
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
....... + ... +.++||||||++++|+++ |
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g 200 (260)
T cd05067 151 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYG 200 (260)
T ss_pred ecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCC
Confidence 5441110 1 223 789999999999999998 6
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=241.19 Aligned_cols=174 Identities=21% Similarity=0.407 Sum_probs=147.1
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.+|+..+.||+|+||.||++... |..||+|.++.. ...+.+.+|+.++++++|+|++++++++.. .+...
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------~~~~~ 75 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGGL 75 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEc-------CCCce
Confidence 46788899999999999999864 788999998643 235679999999999999999999998752 33458
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.++++.. ....+++..++.++.+++.||+|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 76 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred EEEEECCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCcccee
Confidence 9999999999999999752 23458899999999999999999998 6999999999999999999999999999875
Q ss_pred ccCCCCc--------------cCC-CCccceehhhHHHHHHhh
Q 006570 611 SKVRNTL--------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 611 ~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
....... ... +.++|||||||++|||++
T Consensus 152 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~ 194 (256)
T cd05082 152 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194 (256)
T ss_pred ccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHh
Confidence 4321111 223 889999999999999997
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=244.90 Aligned_cols=172 Identities=23% Similarity=0.360 Sum_probs=138.2
Q ss_pred CccccCCccceEEEEeCC---CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.||+|+||.||+|+..+ ...+|+|.+..... .....+.+|++.++.++||||+++++++. .....++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~--------~~~~~~l 72 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI--------ESIPYLL 72 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC--------CCCceEE
Confidence 358999999999997433 34688887764322 22456889999999999999999999885 3455899
Q ss_pred EEEccCCCCHhHHhhccCC--CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 533 VLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
||||+++|+|.+++..... ....++...+.++.|++.|++|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 73 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 149 (269)
T cd05042 73 VLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALE 149 (269)
T ss_pred EEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccc
Confidence 9999999999999975332 2335678889999999999999998 7999999999999999999999999999864
Q ss_pred ccCCC-------------Cc-------------cCC-CCccceehhhHHHHHHhhc
Q 006570 611 SKVRN-------------TL-------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 611 ~~~~~-------------~~-------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
..... .. ... +.++|||||||++|||+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (269)
T cd05042 150 QYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTA 205 (269)
T ss_pred cccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhC
Confidence 31110 00 112 7799999999999999984
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=245.05 Aligned_cols=185 Identities=22% Similarity=0.362 Sum_probs=151.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
+.+.|+..+.||+|+||.||+|+. .+++.||+|++.... .....+..|++++.++ +||||+++++++..... +..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~~ 80 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP--PGM 80 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC--CCC
Confidence 456677889999999999999985 458899999987543 3456788999999998 79999999999864221 112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++... ....+++..+..++.|++.|++|||+ .+|+||||||+||++++++.+||+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCC
Confidence 35689999999999999999752 23468899999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCC----------c------c-----C-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L------S-----F-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~------~-----~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + . . . +.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~ 213 (272)
T cd06637 157 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 213 (272)
T ss_pred CceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9875432110 0 0 1 2 66899999999999999984
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-28 Score=245.83 Aligned_cols=176 Identities=19% Similarity=0.222 Sum_probs=146.7
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|+..+.||+|+||.||++.. .+++.||||.+..... ...+.+.+|+.++++++|++++++++.+. ...
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--------~~~ 73 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE--------TKD 73 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe--------cCC
Confidence 56678899999999999994 4688999999875422 12345778999999999999999998874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++
T Consensus 74 ~~~lv~e~~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 74 ALCLVLTLMNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 689999999999999998642 23458999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC-------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT-------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~-------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . ... +.++|||||||++|||++|.
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 198 (285)
T cd05630 150 VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198 (285)
T ss_pred eecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCC
Confidence 75432111 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=255.63 Aligned_cols=181 Identities=19% Similarity=0.286 Sum_probs=146.7
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+++. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++... +...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQ--KSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccC--CCcc
Confidence 357899999999999999999984 468999999986432 23346788999999999999999999987521 1112
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....|+||||+++ +|.+.++. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecC
Confidence 23457999999975 67776642 37888999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++|||||||++|||+||.
T Consensus 168 g~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~ 219 (359)
T cd07876 168 GLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS 219 (359)
T ss_pred CCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCC
Confidence 99975422110 0 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=241.14 Aligned_cols=168 Identities=21% Similarity=0.382 Sum_probs=139.6
Q ss_pred ccccCCccceEEEEeC---CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 458 LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
.||+|+||.||+|.+. ++..||+|.+..... ...+++.+|++++++++||||+++++++. ....++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~---------~~~~~lv 72 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE---------AEALMLV 72 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---------CCCeEEE
Confidence 3899999999999753 355799999875432 23467899999999999999999999873 2347999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
|||+++|+|.+++.. ....+++..+++++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++....
T Consensus 73 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 73 MEMASGGPLNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred EEeCCCCCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 999999999999964 24568999999999999999999998 6999999999999999999999999999875422
Q ss_pred CCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 614 RNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 614 ~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
... . ... +.++|||||||++||+++ |
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g 195 (257)
T cd05115 148 DDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYG 195 (257)
T ss_pred CccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCC
Confidence 110 0 223 779999999999999986 5
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=245.66 Aligned_cols=181 Identities=25% Similarity=0.395 Sum_probs=145.2
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcC---CCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~~~ 525 (640)
+|+..+.||+|+||+||+|+. .+++.||+|.++.... .....+.+|+++++++ +||||+++++++..... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~---~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRT---D 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccC---C
Confidence 477789999999999999985 4688999999875322 2234566777777665 79999999998753211 2
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++ +|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 78 ~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 78 RETKVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred CCceEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcc
Confidence 34568999999975 899988752 23458999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++||||+||++|||++|.
T Consensus 153 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 204 (288)
T cd07863 153 GLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 204 (288)
T ss_pred CccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCC
Confidence 99976532211 0 233 88999999999999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=247.70 Aligned_cols=178 Identities=17% Similarity=0.321 Sum_probs=146.1
Q ss_pred cCCCCCCccccCCccceEEEEeC-----------------CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCccccee
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-----------------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSI 512 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l 512 (640)
++|+..+.||+|+||.||++... ++..||+|.+.... ....+++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998532 23469999987542 2234678999999999999999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC--------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeec
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFG 584 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH 584 (640)
++++. .+...++||||+++|+|.+++..... ...+++.++..++.|++.|++|||+ .+++|
T Consensus 85 ~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H 153 (296)
T cd05095 85 LAVCI--------TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVH 153 (296)
T ss_pred EEEEe--------cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeec
Confidence 99885 33457999999999999999975321 2347788999999999999999998 69999
Q ss_pred cCCCCCceeecCCCceEEeCCCCCccccCCC------------Cc-------cCC-CCccceehhhHHHHHHhhc
Q 006570 585 NNLKTENILLDKALTAKLSGYNIPLPSKVRN------------TL-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 585 rDlk~~NILl~~~~~~kl~DfGla~~~~~~~------------~~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||||+||++++++.+||+|||+++...... .. ... +.++|||||||++|||+++
T Consensus 154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~ 228 (296)
T cd05095 154 RDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTL 228 (296)
T ss_pred ccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHh
Confidence 9999999999999999999999987542211 00 233 7899999999999999985
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=240.82 Aligned_cols=169 Identities=19% Similarity=0.378 Sum_probs=141.7
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++||||+++++++. .....++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~lv~ 72 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT--------QKQPIYIVM 72 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--------CCCCeEEEE
Confidence 4699999999999995 468899999876432 223467899999999999999999999885 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++++|.++++. ....+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 73 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 73 ELVQGGDFLTFLRT--EGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred eeccCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccc
Confidence 99999999999964 23468999999999999999999998 69999999999999999999999999998753211
Q ss_pred C------------Cc-------cCC-CCccceehhhHHHHHHhh
Q 006570 615 N------------TL-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 615 ~------------~~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
. .+ +.. +.++|||||||++|||++
T Consensus 148 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~ 191 (252)
T cd05084 148 VYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS 191 (252)
T ss_pred cccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence 0 00 223 778999999999999997
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-29 Score=256.50 Aligned_cols=172 Identities=24% Similarity=0.343 Sum_probs=147.5
Q ss_pred CCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|+..+.||.|+||.||-|+ ..+.+.||||++.....+. .+++.+|+..|.+++|||+|.+-|++. ...
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL--------re~ 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL--------REH 99 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee--------ccc
Confidence 5556889999999999999 5678899999997654333 367899999999999999999999876 334
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+|||||- ||-.|++.- ..+++.+.++..|+.++++||+|||+ .+.||||||+.|||+++.|.+|++|||.|
T Consensus 100 TaWLVMEYCl-GSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 100 TAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred hHHHHHHHHh-ccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccch
Confidence 5799999995 588888864 35678999999999999999999999 69999999999999999999999999999
Q ss_pred ccccCCCCc----------------cCC-CCccceehhhHHHHHHhh
Q 006570 609 LPSKVRNTL----------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 609 ~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
....+..+. .++ +-|+||||+||+..||..
T Consensus 174 si~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE 220 (948)
T KOG0577|consen 174 SIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 220 (948)
T ss_pred hhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhh
Confidence 877655433 455 999999999999999875
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=249.07 Aligned_cols=178 Identities=23% Similarity=0.397 Sum_probs=144.7
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCc--EEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS--RVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+.. ++. .+|+|.++... ....+++.+|++++.++ +||||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-------- 78 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-------- 78 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC--------
Confidence 56778899999999999999954 454 46777776432 22345788999999999 8999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.+...|+||||+++|+|.++++... ....+++.+++.++.|++.|++|||+ .+++||||||+||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Ni 155 (303)
T cd05088 79 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNI 155 (303)
T ss_pred CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheE
Confidence 3456899999999999999997532 12358899999999999999999998 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCC---------Cc-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRN---------TL-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~---------~~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+++++.+||+|||+++...... .. ... +.++|||||||+++||+| |
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 220 (303)
T cd05088 156 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 220 (303)
T ss_pred EecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcC
Confidence 99999999999999986432100 00 223 889999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=241.18 Aligned_cols=177 Identities=19% Similarity=0.275 Sum_probs=150.2
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|++|.||+|+. .+++.|++|.+.... ....+++.+|++++++++|||++++++++. ...
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL--------DKG 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec--------cCC
Confidence 467788999999999999995 468899999987532 234567889999999999999999999875 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++++|.++++.. ....+++..++.++.+++.||.|||+ .+++||||||+||++++++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 73 KLNIVMEYAENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEEEEeCCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 689999999999999999763 24568999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ +.. +.++|||||||+++||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 198 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGK 198 (256)
T ss_pred eeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence 765332110 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=247.52 Aligned_cols=175 Identities=18% Similarity=0.361 Sum_probs=149.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|+..+.||+|+||.||+|+. .+++.||+|.+........+.+.+|+++++.++||||+++++++. .+..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~--------~~~~ 91 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL--------VGDE 91 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE--------eCCE
Confidence 4677889999999999999984 568899999998655555678899999999999999999999875 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred EEEeecccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccch
Confidence 8999999999999999853 347899999999999999999998 799999999999999999999999999987
Q ss_pred cccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... + ... +.++|||||||++|||++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~ 213 (296)
T cd06654 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213 (296)
T ss_pred hccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC
Confidence 5422110 0 233 78999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-28 Score=245.18 Aligned_cols=177 Identities=22% Similarity=0.401 Sum_probs=148.0
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+|+. .++..||+|.++... ....+.+.+|++++++++||||+++++++. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM--------QES 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe--------eCC
Confidence 477789999999999999995 468999999986532 223467889999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||++ |+|.+++........+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 73 RLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred eEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccce
Confidence 6899999997 6999998754444678999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . . + .. +.++|||||||+++||+||.
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~ 199 (285)
T cd07861 149 RAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199 (285)
T ss_pred eecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCC
Confidence 6442110 0 0 1 22 77899999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=245.20 Aligned_cols=178 Identities=25% Similarity=0.410 Sum_probs=146.2
Q ss_pred cCCCCCCccccCCccceEEEEeCC------CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|+..+.||+|+||.||+|.... ...||+|.++.... ...+++.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~------ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT------ 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc------
Confidence 357778999999999999998532 25799999874322 23467899999999999999999999875
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCC
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~ 590 (640)
.....+++|||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+++||||||+
T Consensus 79 --~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~ 153 (283)
T cd05048 79 --KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAAR 153 (283)
T ss_pred --CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccc
Confidence 33457999999999999999975321 1458899999999999999999998 69999999999
Q ss_pred ceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 591 NILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 591 NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||++++++.+||+|||+++....... . ... +.++|||||||++|||++ |
T Consensus 154 Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g 223 (283)
T cd05048 154 NCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYG 223 (283)
T ss_pred eEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCC
Confidence 99999999999999999875422110 0 233 889999999999999997 5
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=241.38 Aligned_cols=174 Identities=21% Similarity=0.408 Sum_probs=146.4
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|...+.||+|+||.||+|....+..+|+|.+.... ...+.+.+|++++++++|||++++++++. ....
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------~~~~ 75 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS---------EEPI 75 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc---------CCCc
Confidence 4577788999999999999998777789999886433 34577899999999999999999998762 2336
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.++++.. ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~ 151 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARL 151 (260)
T ss_pred EEEEEcCCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceE
Confidence 8999999999999999752 23458899999999999999999998 6999999999999999999999999999975
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
...... . ... +.++|||||||++|||+|
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t 198 (260)
T cd05069 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 198 (260)
T ss_pred ccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHh
Confidence 432110 0 233 789999999999999998
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=241.22 Aligned_cols=169 Identities=22% Similarity=0.396 Sum_probs=138.2
Q ss_pred CccccCCccceEEEEeCC-------------CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 457 NLIGEGSQGQLYKGFLTD-------------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
+.||+|+||.||+|+..+ ...|++|.+..........+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~------ 74 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV------ 74 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe------
Confidence 468999999999998532 2358899887654445567889999999999999999999985
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc----
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---- 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---- 599 (640)
.....++||||+++|+|..+++. ....+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.
T Consensus 75 --~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 75 --RDVENIMVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred --cCCCCEEEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCC
Confidence 23446999999999999998864 23568999999999999999999998 79999999999999987654
Q ss_pred ---eEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhh
Q 006570 600 ---AKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 600 ---~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+|++|||++......... ... +.++|||||||++|||++
T Consensus 148 ~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~ 204 (262)
T cd05077 148 GPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICY 204 (262)
T ss_pred CceeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHh
Confidence 899999998654321110 223 778999999999999974
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=246.53 Aligned_cols=179 Identities=23% Similarity=0.337 Sum_probs=147.9
Q ss_pred cCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|...+.||+|+||.||+|+.. ++..+++|.++.......+.+.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 77 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG------- 77 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-------
Confidence 35677899999999999999742 34569999987554444567999999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCc
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~N 591 (640)
.+...++||||+++|+|.+++.... ....+++..++.++.|++.|++|||+ .+|+||||||+|
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~N 153 (291)
T cd05094 78 -DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRN 153 (291)
T ss_pred -cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcce
Confidence 3455899999999999999996422 12358999999999999999999998 699999999999
Q ss_pred eeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 592 ILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 592 ILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|+++.++.+||+|||++........ + +.. +.++|||||||++|||+| |.
T Consensus 154 il~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 223 (291)
T cd05094 154 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 223 (291)
T ss_pred EEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999875422110 0 233 789999999999999998 63
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.4e-28 Score=247.53 Aligned_cols=180 Identities=21% Similarity=0.375 Sum_probs=148.0
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
...++|+..+.||+|+||.||++... ....+|+|.+..... ....++.+|++++.++ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-- 86 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT-- 86 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc--
Confidence 34456888899999999999999853 236799999875322 2235688999999999 8999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhcc-------------CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDW-------------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.+...+++|||+++|+|.++++.. .....+++..++.++.|++.||+|||+ .+|+|||
T Consensus 87 ------~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~d 157 (293)
T cd05053 87 ------QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRD 157 (293)
T ss_pred ------CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccc
Confidence 344589999999999999999642 123568999999999999999999998 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
|||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||++
T Consensus 158 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (293)
T cd05053 158 LAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229 (293)
T ss_pred cceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhc
Confidence 999999999999999999999976432110 1 233 888999999999999987
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-28 Score=246.90 Aligned_cols=175 Identities=18% Similarity=0.360 Sum_probs=150.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|+..+.||+|+||.||+|+. .+++.||+|.+........+.+.+|+.+++.++||||+++++++. .+..
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~~ 90 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL--------VGDE 90 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe--------cCCE
Confidence 5688899999999999999994 578999999997655555677899999999999999999999885 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++++|.+++.+ ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred EEEeecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccce
Confidence 8999999999999999853 347899999999999999999998 799999999999999999999999999987
Q ss_pred cccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . +.. +.++|||||||++||+++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~ 212 (297)
T cd06656 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212 (297)
T ss_pred EccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 5432210 0 223 78999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-28 Score=255.31 Aligned_cols=180 Identities=16% Similarity=0.255 Sum_probs=147.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||++.. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++... +....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~--~~~~~ 100 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ--KSLEE 100 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccc--ccccc
Confidence 46799999999999999999984 468899999987532 23346788999999999999999999887421 11123
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++ +|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCC
Confidence 3468999999975 78887742 37889999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCC-------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT-------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~-------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . +.. +.++|||||||++|||++|+
T Consensus 172 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 222 (364)
T cd07875 172 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222 (364)
T ss_pred CccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCC
Confidence 9976533211 0 333 88999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=242.15 Aligned_cols=179 Identities=17% Similarity=0.297 Sum_probs=149.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+. .+++.||||.++... ......+.+|++++++++||||+++++++. .
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 73 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI--------E 73 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE--------E
Confidence 4788899999999999999994 478999999886432 222356889999999999999999999875 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.++|+||
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~ 150 (267)
T cd08228 74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECcc
Confidence 345899999999999999886422 23457889999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++........ . +.. +.++||||||+++|||++|.
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 203 (267)
T cd08228 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred ccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCC
Confidence 99876432110 0 233 78899999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=247.51 Aligned_cols=178 Identities=16% Similarity=0.316 Sum_probs=145.4
Q ss_pred cCCCCCCccccCCccceEEEEeCC---------------CcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeee
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD---------------GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILG 514 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g 514 (640)
++|.+.+.||+|+||.||+++... ...||+|.++... ....+.+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 568888999999999999987532 2358999987542 223457899999999999999999999
Q ss_pred EEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC---------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeecc
Q 006570 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK---------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585 (640)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~---------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr 585 (640)
++. .....++||||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+++||
T Consensus 85 ~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~ 153 (295)
T cd05097 85 VCV--------SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHR 153 (295)
T ss_pred EEc--------CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeecc
Confidence 885 3345899999999999999996421 11247899999999999999999998 699999
Q ss_pred CCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 586 NLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 586 Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
||||+||++++++.+||+|||++........ + ... +.++|||||||+++||+++
T Consensus 154 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~ 227 (295)
T cd05097 154 DLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTL 227 (295)
T ss_pred ccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHc
Confidence 9999999999999999999999875421110 0 233 8899999999999999984
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-28 Score=247.37 Aligned_cols=178 Identities=21% Similarity=0.396 Sum_probs=144.9
Q ss_pred cCCCCCCccccCCccceEEEEeCC-Cc--EEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD-GS--RVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+..+ +. .+++|.++... ....+.+.+|++++.++ +||||+++++++.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-------- 73 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-------- 73 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc--------
Confidence 578889999999999999998643 33 47888887422 22346789999999999 7999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.....++||||+++|+|.++++... ....+++..+..++.|++.||+|||+ .+|+||||||+||
T Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Ni 150 (297)
T cd05089 74 NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNV 150 (297)
T ss_pred cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceE
Confidence 3345899999999999999997522 11358899999999999999999998 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCC-----C--C--c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 593 LLDKALTAKLSGYNIPLPSKVR-----N--T--L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~-----~--~--~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++++++.+||+|||++...... . . . ... +.++|||||||++|||++ |
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g 215 (297)
T cd05089 151 LVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLG 215 (297)
T ss_pred EECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999999998643211 0 0 0 223 889999999999999997 5
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-28 Score=252.98 Aligned_cols=179 Identities=21% Similarity=0.345 Sum_probs=145.8
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +||||++++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--- 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence 35688899999999999999973 3467899999975432 2235688999999999 68999999998852
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCC--------------------------------------------------
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------------------------------------------- 551 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 551 (640)
.+...++||||+++|+|.++++....
T Consensus 83 ----~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (343)
T cd05103 83 ----PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSL 158 (343)
T ss_pred ----CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcc
Confidence 33457999999999999999864210
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCC-
Q 006570 552 --------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT- 616 (640)
Q Consensus 552 --------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~- 616 (640)
...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 235 (343)
T cd05103 159 SDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 235 (343)
T ss_pred ccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcch
Confidence 1247888999999999999999998 7999999999999999999999999999875421100
Q ss_pred -----------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 617 -----------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 617 -----------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+ +.. +.++|||||||++|||++
T Consensus 236 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 276 (343)
T cd05103 236 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 276 (343)
T ss_pred hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHH
Confidence 1 233 789999999999999996
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=287.73 Aligned_cols=295 Identities=28% Similarity=0.402 Sum_probs=201.2
Q ss_pred CCHHHHHHHHHHHHhCCCCC-CCCCCCCCCCCCCCCCCCcccEEeCC-CcEEEEEecCCCCCCCCCCCCcCCCccccccc
Q 006570 29 LTPSETRILFQVQKLLEYPE-VLQGWTDWTNFCYLPSSSSLKIVCTN-SRVTELTVIGNKSSPAHSPKPTFGKFSASQQS 106 (640)
Q Consensus 29 ~~~~~~~~l~~~k~~~~~~~-~l~~W~~~~~~C~~~~~~~~gv~C~~-~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~ 106 (640)
..++|+.||++||+.+.+|. .+.+|+..++||.|. ||.|++ ++|+.|+|+++++++.+++ .+...+.|+.|+
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~-----gv~c~~~~~v~~L~L~~~~i~~~~~~-~~~~l~~L~~L~ 99 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQ-----GITCNNSSRVVSIDLSGKNISGKISS-AIFRLPYIQTIN 99 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCc-----ceecCCCCcEEEEEecCCCccccCCh-HHhCCCCCCEEE
Confidence 35689999999999998774 678998888999998 899974 7999999999988776532 234457888888
Q ss_pred cCccCCCChhhhhhc-CCCCCcEeecccCcCcCC----------------------CCccccCCCCCCEEEcccCccccc
Q 006570 107 LSANFNIDRFFTILT-KLSNLKVLSLVSLGLWGP----------------------LPSKINRFWSLEVLNISSNFIYGE 163 (640)
Q Consensus 107 l~~n~~~~~~~~~l~-~l~~L~~L~L~~n~l~~~----------------------~p~~~~~l~~L~~L~Ls~N~l~~~ 163 (640)
|++|.+.+.+|..+. ++++|++|+|++|++++. +|..++++++|++|+|++|.+.+.
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 179 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK 179 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccccc
Confidence 888888777776543 666666666666666554 444455555555555555555555
Q ss_pred CCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCC
Q 006570 164 IPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNF 239 (640)
Q Consensus 164 ~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l 239 (640)
+|..++++++|++|+|++|.+++.+|. +.++++|++|+|++|++++.+|.. +++|+.|++++|++++.+|..++++
T Consensus 180 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 259 (968)
T PLN00113 180 IPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL 259 (968)
T ss_pred CChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCC
Confidence 555555555555555555555554443 555555555555555555555543 4566666666666666666666666
Q ss_pred CCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeee
Q 006570 240 DQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVS 319 (640)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l 319 (640)
++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+|..+..+++|+.|++++|.+++.+|..+..+++|+.+++
T Consensus 260 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 339 (968)
T PLN00113 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQL 339 (968)
T ss_pred CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEEC
Confidence 66666666666666666666666666666777766666666666666777777777777777777777777777777777
Q ss_pred ccccccCccC
Q 006570 320 TWNCLSGVNT 329 (640)
Q Consensus 320 ~~N~l~~~~~ 329 (640)
++|.+++..|
T Consensus 340 ~~n~l~~~~p 349 (968)
T PLN00113 340 WSNKFSGEIP 349 (968)
T ss_pred cCCCCcCcCC
Confidence 7777776554
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-29 Score=241.13 Aligned_cols=173 Identities=19% Similarity=0.334 Sum_probs=150.4
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
|++.+++|+|+||.||+|.+ ..|+.||||.+.... +.+++.+|+.+|++++.|+||++||.++ ....+|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYF--------K~sDLW 104 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYF--------KHSDLW 104 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhc--------cCCceE
Confidence 55678999999999999985 469999999987543 4689999999999999999999999876 334589
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+|||||..|++.+.++. +++++.+.++..+.+..++||+|||. ..-||||||+.|||++.+|.+|++|||.|...
T Consensus 105 IVMEYCGAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred eehhhcCCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchh
Confidence 99999999999999985 56789999999999999999999998 78999999999999999999999999999766
Q ss_pred cCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...-.. .-. ++++||||+|++..||..|.
T Consensus 180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~ 226 (502)
T KOG0574|consen 180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGR 226 (502)
T ss_pred hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCC
Confidence 432111 112 88999999999999999884
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=252.73 Aligned_cols=168 Identities=21% Similarity=0.234 Sum_probs=136.7
Q ss_pred cccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcC---CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 459 ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
||+|+||+||+|+. .+++.||||++..... .....+..|..++... +||||+++++++. .....|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~--------~~~~~~ 72 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ--------TDSDLY 72 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe--------cCCeEE
Confidence 69999999999994 4689999999964321 1223445566666655 6999999998774 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 73 LVTDYMSGGELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEcCCCCChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999999999864 4568999999999999999999998 79999999999999999999999999998753
Q ss_pred cCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... + + + .. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~ 194 (330)
T cd05586 147 LTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGW 194 (330)
T ss_pred CCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCC
Confidence 2111 0 0 2 22 78899999999999999984
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=243.20 Aligned_cols=182 Identities=19% Similarity=0.255 Sum_probs=149.7
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++.+++++.....||+|+||.||+|+. .++..||+|.+........+.+.+|++++++++|+||+++++++.
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 75 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS------- 75 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-------
Confidence 344566777778999999999999994 457889999987654445578999999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCC--CHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceE
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDML--KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAK 601 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~k 601 (640)
.++..++||||+++++|.++++.. ...+ ++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+|
T Consensus 76 -~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~ 149 (268)
T cd06624 76 -ENGFFKIFMEQVPGGSLSALLRSK--WGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVK 149 (268)
T ss_pred -cCCEEEEEEecCCCCCHHHHHHHh--cccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEE
Confidence 345689999999999999999752 2234 788899999999999999998 79999999999999987 67999
Q ss_pred EeCCCCCccccCCCC----------c--------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNT----------L--------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~----------~--------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||++........ . . .. +.++||||||+++|||++|.
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~ 208 (268)
T cd06624 150 ISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK 208 (268)
T ss_pred EecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCC
Confidence 999999865421100 0 1 22 78999999999999999983
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-28 Score=244.18 Aligned_cols=168 Identities=21% Similarity=0.360 Sum_probs=135.8
Q ss_pred ccccCCccceEEEEeCC-------------------------CcEEEEEEeecccCCChHHHHHHHHHHhcCCCccccee
Q 006570 458 LIGEGSQGQLYKGFLTD-------------------------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 512 (640)
.||+|+||.||+|.+.. ...||+|.+........+++.+|+++++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 13589998875444345678899999999999999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
+++|. .....++||||+++|+|.+++.. ....+++..++.++.|+++||+|||+ .+|+||||||+||
T Consensus 82 ~~~~~--------~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCV--------RGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNI 148 (274)
T ss_pred EEEEE--------eCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccE
Confidence 99986 23457999999999999999864 24568899999999999999999998 7999999999999
Q ss_pred eecCCC-------ceEEeCCCCCccccCCCC------c-------c-CC-CCccceehhhHHHHHHhh
Q 006570 593 LLDKAL-------TAKLSGYNIPLPSKVRNT------L-------S-FH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 593 Ll~~~~-------~~kl~DfGla~~~~~~~~------~-------~-~~-~~~~DvwS~Gvvl~ellt 638 (640)
++++.+ .+|++|||++........ . + .. +.++|||||||++|||++
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 997653 379999998754321110 0 2 23 889999999999999853
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=239.96 Aligned_cols=175 Identities=23% Similarity=0.469 Sum_probs=149.4
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|... |+.||+|.++.... ..+++.+|+.++++++|+||+++++++. .....
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~ 75 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL--------QGNPL 75 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc--------CCCCe
Confidence 46778899999999999999874 78999999975543 4578999999999999999999999875 24558
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++++|.+++... ....+++..+..++.|++.|+.|||+ .+++||||||+||+++.++.+||+|||.++.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSR-GRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccc
Confidence 9999999999999999752 23368999999999999999999998 7999999999999999999999999999876
Q ss_pred ccCCCCc--------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNTL--------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
....... ... +.++||||||++++|+++ |
T Consensus 152 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g 196 (256)
T cd05039 152 ASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred cccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 5321110 233 778999999999999986 5
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=260.46 Aligned_cols=170 Identities=22% Similarity=0.276 Sum_probs=142.7
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|.+.+.||+|+||.||+|+.. .++.||||... ...+.+|++++++++|||||++++++. .+..
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~--------~~~~ 234 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRV--------VGGL 234 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEE--------ECCE
Confidence 46888999999999999999954 47889999643 234678999999999999999999885 3355
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+. |+|.+++.. ....++|.+++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 235 ~~lv~e~~~-~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 235 TCLVLPKYR-SDLYTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred EEEEEEccC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCce
Confidence 799999995 699998864 23468999999999999999999998 799999999999999999999999999997
Q ss_pred cccCCC----------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRN----------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~----------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... +. +.. +.++|||||||++|||++|+
T Consensus 309 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~ 359 (461)
T PHA03211 309 FARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHT 359 (461)
T ss_pred ecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcC
Confidence 542211 10 333 88999999999999998863
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=246.42 Aligned_cols=176 Identities=19% Similarity=0.369 Sum_probs=147.0
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++. ...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~--------~~~ 77 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH--------TEK 77 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe--------cCC
Confidence 46888899999999999999854 58899999987543 233456788999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||++ ++|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 78 SLTLVFEYLD-KDLKQYLDD--CGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred eEEEEEeccc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 6899999997 599998864 23458899999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . + .. +.++|||||||++|||+||.
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 202 (301)
T cd07873 152 RAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGR 202 (301)
T ss_pred hccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCC
Confidence 75421110 0 1 22 67899999999999999984
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=246.54 Aligned_cols=180 Identities=17% Similarity=0.330 Sum_probs=145.8
Q ss_pred HhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
..++|++.+.||+|+||.||+|... .+..||+|.++.... .....+.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS---- 79 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 3567888999999999999999743 245799998864322 22346788999999999999999999874
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCC-------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
.....++||||+++|+|.++++.... ....++..+..++.|++.||+|||+ .+|+||||||+||++
T Consensus 80 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili 152 (288)
T cd05061 80 ----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMV 152 (288)
T ss_pred ----CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEE
Confidence 33457999999999999999975221 2345677889999999999999998 799999999999999
Q ss_pred cCCCceEEeCCCCCccccCCC------------Cc-------cCC-CCccceehhhHHHHHHhhc
Q 006570 595 DKALTAKLSGYNIPLPSKVRN------------TL-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~~~------------~~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++++.+||+|||+++...... .+ +.. +.++|||||||++|||+++
T Consensus 153 ~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~ 217 (288)
T cd05061 153 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 217 (288)
T ss_pred cCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhC
Confidence 999999999999987432110 01 233 8899999999999999973
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-28 Score=256.00 Aligned_cols=179 Identities=22% Similarity=0.374 Sum_probs=145.9
Q ss_pred HhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCC-CcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~ 520 (640)
..++|.+.+.||+|+||.||+|++. .+..||+|+++.... ...+.+.+|+++|.++. ||||++++|+|.
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~--- 111 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT--- 111 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc---
Confidence 3456777899999999999999853 246899999975432 22357889999999997 999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------------------------------------------
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------------------------------------------- 551 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------------------------------------------- 551 (640)
.....++||||+++|+|.++++..+.
T Consensus 112 -----~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 112 -----KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred -----cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 33458999999999999999975211
Q ss_pred ----------------------------------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeecc
Q 006570 552 ----------------------------------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585 (640)
Q Consensus 552 ----------------------------------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr 585 (640)
...+++..+..|+.|++.||+|||+ .+++||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHr 263 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHR 263 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcc
Confidence 1246788899999999999999998 799999
Q ss_pred CCCCCceeecCCCceEEeCCCCCccccCCC------C------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 586 NLKTENILLDKALTAKLSGYNIPLPSKVRN------T------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 586 Dlk~~NILl~~~~~~kl~DfGla~~~~~~~------~------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||||+|||+++++.+||+|||+++...... . + ... +.++|||||||++|||++
T Consensus 264 dlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~ 336 (401)
T cd05107 264 DLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336 (401)
T ss_pred cCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHH
Confidence 999999999999999999999997542110 0 0 223 788999999999999998
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-28 Score=254.44 Aligned_cols=181 Identities=17% Similarity=0.267 Sum_probs=147.5
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+++. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++.... ...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK--SLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc--ccc
Confidence 457899999999999999999984 468899999987532 223467788999999999999999999875321 112
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeC
Confidence 33457999999965 77777742 47889999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 164 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 215 (355)
T cd07874 164 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215 (355)
T ss_pred cccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 999765432110 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=245.44 Aligned_cols=179 Identities=18% Similarity=0.280 Sum_probs=148.6
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|+..+.||+|+||.||+++.. ++..||+|.++... ....+.+.+|++++++++||||+++++++. ....
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~~ 73 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF--------IEGA 73 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee--------cCCe
Confidence 5778899999999999999964 68999999887532 222367889999999999999999999775 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++++|.++++.......+++..+..++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||++.
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 151 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSG 151 (286)
T ss_pred EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcc
Confidence 899999999999999987533344789999999999999999999963 589999999999999999999999999986
Q ss_pred cccCCCCc---------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL---------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~---------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++|||||||++|||++|+
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~ 204 (286)
T cd06622 152 NLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGR 204 (286)
T ss_pred cccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCC
Confidence 54211100 011 67899999999999999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=241.84 Aligned_cols=176 Identities=19% Similarity=0.344 Sum_probs=146.1
Q ss_pred cCCCCCCccccCCccceEEEEeC-C---CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-D---GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.+|++.+.||+|+||.||+|+.. + +..+|+|.++.... ...+.+.+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 75 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-------- 75 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe--------
Confidence 45778899999999999999853 2 34799999875322 23467899999999999999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.+++.. ....+++.+++.++.|++.|++|||+ .+++||||||+||+++.++.+|++||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 76 KSKPVMIVTEYMENGSLDAFLRK--HDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred cCCccEEEEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCC
Confidence 34568999999999999999974 23468999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+++....... . ... +.++|||||||++||+++ |
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g 206 (267)
T cd05066 151 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 206 (267)
T ss_pred CcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCC
Confidence 99876432110 0 233 889999999999999886 6
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=251.69 Aligned_cols=183 Identities=16% Similarity=0.278 Sum_probs=148.8
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
...++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++..... .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~ 89 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS--I 89 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc--c
Confidence 3457899999999999999999984 568899999987432 1234567889999999999999999987742211 1
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
......++++|++ +++|.+++. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcC
Confidence 1234579999998 779998875 3458999999999999999999998 7999999999999999999999999
Q ss_pred CCCCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ + .. +.++|||||||++|||++|.
T Consensus 162 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 213 (343)
T cd07878 162 FGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213 (343)
T ss_pred CccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCC
Confidence 9999765332111 2 23 78999999999999999984
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=244.03 Aligned_cols=180 Identities=21% Similarity=0.354 Sum_probs=149.8
Q ss_pred hcCCCCCCccccCCccceEEEEeCC-----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD-----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
.++|+..+.||+|+||.||+|...+ +..|++|+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 79 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE----- 79 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 4578888999999999999999654 67899999874322 234668899999999999999999998862
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCC-----CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKK-----DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
.+...++++||+++|+|.+++...... ..+++.+++.++.|++.||+|||+ .+++||||||+||++++++
T Consensus 80 --~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~ 154 (280)
T cd05043 80 --DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEEL 154 (280)
T ss_pred --CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCC
Confidence 234579999999999999999753322 568999999999999999999998 6999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 599 TAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
.+||+|||+++....... . ... +.++|||||||++||+++ |
T Consensus 155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g 216 (280)
T cd05043 155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLG 216 (280)
T ss_pred cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCC
Confidence 999999999975422110 0 233 889999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=243.52 Aligned_cols=178 Identities=23% Similarity=0.359 Sum_probs=147.8
Q ss_pred cCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|...+.||+|+||.||++... ++..+|+|.++.......+.+.+|++++++++|+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------- 77 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT------- 77 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-------
Confidence 45677899999999999999632 35689999887655445678999999999999999999999875
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCC------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKK------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.+...+++|||+++|+|.++++.... ...+++..++.++.|++.|++|||+ .+++||||||+||
T Consensus 78 -~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~ni 153 (280)
T cd05092 78 -EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNC 153 (280)
T ss_pred -cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhE
Confidence 34558999999999999999975321 1358899999999999999999998 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCC------------Cc-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRN------------TL-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~------------~~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++++++.+||+|||+++...... .+ +.. +.++|||||||++|||++ |
T Consensus 154 l~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 221 (280)
T cd05092 154 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYG 221 (280)
T ss_pred EEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCC
Confidence 99999999999999986432110 01 233 889999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=242.65 Aligned_cols=171 Identities=18% Similarity=0.309 Sum_probs=143.8
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|+..+.||+|+||.||+|+ ..+++.||+|.+.... ....+++.+|++++++++||||+++++++. ....
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~ 73 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF--------VENR 73 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE--------ECCE
Confidence 57778999999999999998 4568899999987542 223467889999999999999999999886 2345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|..+. .+++..+..++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++.
T Consensus 74 ~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~ 143 (279)
T cd06619 74 ISICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVST 143 (279)
T ss_pred EEEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence 79999999999997653 36788899999999999999998 799999999999999999999999999987
Q ss_pred cccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++|||||||++|||++|.
T Consensus 144 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~ 190 (279)
T cd06619 144 QLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGR 190 (279)
T ss_pred ecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCC
Confidence 54322110 223 88999999999999999984
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=238.73 Aligned_cols=167 Identities=19% Similarity=0.359 Sum_probs=140.0
Q ss_pred ccccCCccceEEEEe---CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 458 LIGEGSQGQLYKGFL---TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.||+|+||.||+|.+ .++..+|+|+++.... ...+++.+|+.++++++||||+++++++. .+..++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------~~~~~l 72 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE---------AESWML 72 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---------CCCcEE
Confidence 589999999999964 3578899999874432 23467899999999999999999999873 234689
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 73 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 73 VMELAELGPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred EEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 9999999999999964 3468999999999999999999998 799999999999999999999999999987653
Q ss_pred CCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 613 VRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 613 ~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
.... . ... +.++|||||||++|||+| |
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g 195 (257)
T cd05116 147 ADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYG 195 (257)
T ss_pred CCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCC
Confidence 2211 0 122 679999999999999997 6
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=244.41 Aligned_cols=178 Identities=17% Similarity=0.314 Sum_probs=150.1
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||.||+|+. .++..||+|.++.......+.+.+|++++++++||||+++++++. .+.
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF--------YEN 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe--------cCC
Confidence 34677889999999999999995 468899999997654444567899999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLE--LERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred eEEEEeeccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccc
Confidence 68999999999999999864 23468999999999999999999998 69999999999999999999999999987
Q ss_pred ccccCCCC----------c------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . ... +.++|||||||++|||++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~ 205 (280)
T cd06611 151 AKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME 205 (280)
T ss_pred hhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCC
Confidence 65422110 0 112 66899999999999999984
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=237.78 Aligned_cols=169 Identities=22% Similarity=0.400 Sum_probs=142.5
Q ss_pred CccccCCccceEEEEeCCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEE
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~E 535 (640)
+.||+|+||.||+|...++..||+|.+..... .....+.+|++++++++||||+++++++. .....++|||
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~lv~e 72 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT--------QRQPIYIVME 72 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe--------cCCccEEEEE
Confidence 46899999999999988889999999875432 22356889999999999999999999885 3345799999
Q ss_pred ccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCC
Q 006570 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN 615 (640)
Q Consensus 536 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~ 615 (640)
|+++|+|.+++.. ....+++..++.++.+++.||.|+|+ .+++||||||+||++++++.+||+|||++.......
T Consensus 73 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 73 LVPGGDFLSFLRK--KKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred CCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccc
Confidence 9999999999864 23457899999999999999999998 799999999999999999999999999986532211
Q ss_pred C-----------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 616 T-----------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 616 ~-----------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
. . +.. +.++||||||+++||+++
T Consensus 148 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~ 189 (250)
T cd05085 148 YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFS 189 (250)
T ss_pred cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhc
Confidence 0 0 233 778999999999999998
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=243.00 Aligned_cols=176 Identities=19% Similarity=0.312 Sum_probs=147.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|+..+.||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++++. .+..
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~--------~~~~ 80 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL--------RRDK 80 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE--------eCCE
Confidence 3566678899999999999984 568899999997654444567889999999999999999999875 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++.. ...+++.+++.++.|++.|++|||+ .+++|+||||+||+++.++.+||+|||++.
T Consensus 81 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 81 LWICMEFCGGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEEEEeccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeee
Confidence 8999999999999999864 4468999999999999999999998 699999999999999999999999999986
Q ss_pred cccCCCC----------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... + ... +.++|||||||++|||++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~ 206 (267)
T cd06645 155 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQ 206 (267)
T ss_pred EccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCC
Confidence 4321110 0 112 67899999999999999873
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=239.18 Aligned_cols=179 Identities=18% Similarity=0.316 Sum_probs=150.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++. .
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~--------~ 73 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI--------E 73 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee--------c
Confidence 57888999999999999999965 78999999886422 223567899999999999999999999885 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++||||+++|+|.+++.... ....+++.+++.++.+++.||+|||+ .+++||||||+||++++++.++|+||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~ 150 (267)
T cd08224 74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEecc
Confidence 356899999999999999986532 24568999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++........ . +.. +.++|||||||++|||++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~ 203 (267)
T cd08224 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred ceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCC
Confidence 99865432110 0 233 77899999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=239.57 Aligned_cols=168 Identities=23% Similarity=0.338 Sum_probs=139.6
Q ss_pred CccccCCccceEEEEeCCCc-----------EEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTDGS-----------RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
+.||+|+||.||+|...+.. .|++|.+...... ...+.+|++++++++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-------
Confidence 46899999999999965432 5788877654333 6789999999999999999999998862
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-------
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL------- 598 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~------- 598 (640)
...++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 73 --DENIMVEEYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred --CCcEEEEEcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCce
Confidence 2368999999999999999752 2268999999999999999999998 7999999999999999887
Q ss_pred ceEEeCCCCCccccCCCC------c-------cC--C-CCccceehhhHHHHHHhhc
Q 006570 599 TAKLSGYNIPLPSKVRNT------L-------SF--H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~------~-------~~--~-~~~~DvwS~Gvvl~elltG 639 (640)
.+||+|||++........ . .. . +.++|||||||++|||++|
T Consensus 146 ~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~ 202 (259)
T cd05037 146 FIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN 202 (259)
T ss_pred eEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence 799999999886432110 0 22 3 8889999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=238.85 Aligned_cols=171 Identities=19% Similarity=0.312 Sum_probs=143.9
Q ss_pred CccccCCccceEEEEeCC--C--cEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLTD--G--SRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+++.+|++++++++||||+++++++. . ...+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~-~~~~ 71 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL--------T-HPLM 71 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc--------C-CeEE
Confidence 468999999999998643 3 3699999986544 45578999999999999999999999875 2 4589
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++..... ..+++...+.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 72 ~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 72 MVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999999975322 568999999999999999999998 79999999999999999999999999998765
Q ss_pred cCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 612 KVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 612 ~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
..... + +.. +.++|||||||++|||+| |.
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~ 198 (257)
T cd05040 148 PQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGE 198 (257)
T ss_pred cccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCC
Confidence 33110 0 223 788999999999999998 63
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=240.46 Aligned_cols=178 Identities=21% Similarity=0.299 Sum_probs=146.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-----CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||.||+|+. .++..||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 4688899999999999999985 5689999998864321 1235688899999999999999999976421
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....+++|||+++|+|.+++.. ...+++...+.++.|++.||+|||+ .+++|+||||+||+++.++.+||+|
T Consensus 77 -~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 77 -MERTLSIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred -CCceEEEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECc
Confidence 23457899999999999999864 3457889999999999999999998 6999999999999999999999999
Q ss_pred CCCCccccCC-----C------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVR-----N------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~-----~------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++..... . . . +.. +.++|||||||++|||++|.
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~ 206 (265)
T cd06652 150 FGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK 206 (265)
T ss_pred CccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCC
Confidence 9998743210 0 0 0 223 78999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=238.59 Aligned_cols=176 Identities=20% Similarity=0.293 Sum_probs=148.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-----CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|++|.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------- 74 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR------- 74 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-------
Confidence 4688899999999999999984 4689999999864321 12356889999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|
T Consensus 75 -~~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 75 -DDETLSIFMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred -cCCeEEEEEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEee
Confidence 34578999999999999999964 3458899999999999999999998 6999999999999999999999999
Q ss_pred CCCCccccCCC-------------Cc-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRN-------------TL-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~-------------~~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++...... .. +.. +.++||||||+++|||++|.
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 204 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCC
Confidence 99986432110 00 223 78999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-28 Score=272.19 Aligned_cols=187 Identities=15% Similarity=0.257 Sum_probs=150.0
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
...++|.+.+.||+|+||+||+|+. .++..||+|.+.... ......+..|+.++++++|||||++++++...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de----- 84 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK----- 84 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec-----
Confidence 3456899999999999999999994 457789999987532 22346789999999999999999999987531
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCC----CCCeeccCCCCCceeecCC--
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGV----APGIFGNNLKTENILLDKA-- 597 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~----~~~iiHrDlk~~NILl~~~-- 597 (640)
....+|+||||+++|+|.++|.... ....+++..++.|+.||+.||+|||+.. ..+||||||||+|||++.+
T Consensus 85 -~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 85 -ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred -CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 3356899999999999999997532 2356999999999999999999999732 1359999999999999643
Q ss_pred ---------------CceEEeCCCCCccccCCC-------Cc-----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 ---------------LTAKLSGYNIPLPSKVRN-------TL-----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ---------------~~~kl~DfGla~~~~~~~-------~~-----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..+||+|||++....... +. ... +.++|||||||++|||+||.
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 348999999987653211 00 122 78999999999999999984
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=242.60 Aligned_cols=175 Identities=16% Similarity=0.294 Sum_probs=146.3
Q ss_pred CCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++|||++++++++. .+...+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~--------~~~~~~ 78 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY--------YENNLW 78 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe--------eCCEEE
Confidence 456788999999999999954 57889999987544444567889999999999999999999885 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 79 ~v~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 79 ILIEFCAGGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccc
Confidence 99999999999998864 23568999999999999999999998 79999999999999999999999999998654
Q ss_pred cCCCC----------c------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRNT----------L------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~~----------~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... + ... +.++|||||||++|||++|.
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~ 205 (282)
T cd06643 154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIE 205 (282)
T ss_pred cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCC
Confidence 22110 0 111 56899999999999999883
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=242.65 Aligned_cols=179 Identities=17% Similarity=0.302 Sum_probs=146.5
Q ss_pred hcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|++.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++++++|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 79 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF----- 79 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----
Confidence 456888999999999999999864 356799998864432 23457899999999999999999999875
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCC----CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
+....++||||+++|+|.++++..+. ...+++..++.++.|++.|++|||+ .+++||||||+||+++.++
T Consensus 80 ---~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 80 ---ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKG 153 (277)
T ss_pred ---cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccC
Confidence 23457999999999999999975321 2358999999999999999999998 6999999999999998764
Q ss_pred ---ceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 599 ---TAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 599 ---~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
.+||+|||+++....... + +.. +.++|||||||++|||++ |
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g 218 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLG 218 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCC
Confidence 699999999976421110 0 334 889999999999999996 5
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=239.49 Aligned_cols=171 Identities=18% Similarity=0.372 Sum_probs=139.2
Q ss_pred CccccCCccceEEEEeC----CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.. .+...+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------~~~~~~ 73 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP-------SEGSPL 73 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec-------CCCCcE
Confidence 46899999999999843 24579999885432 2234678899999999999999999998752 223468
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.++++. .....++..+..++.|++.|++|||+ .+++||||||+||++++++.+||+|||+++..
T Consensus 74 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 74 VVLPYMKHGDLRNFIRS--ETHNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred EEEecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999999974 23446788889999999999999998 69999999999999999999999999998754
Q ss_pred cCCC------------C--c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 612 KVRN------------T--L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 612 ~~~~------------~--~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
.... . . ... +.++|||||||++|||++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 198 (262)
T cd05058 149 YDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 198 (262)
T ss_pred cCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcC
Confidence 2110 0 0 223 7899999999999999985
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=244.40 Aligned_cols=193 Identities=20% Similarity=0.335 Sum_probs=156.2
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEe
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~ 518 (640)
+.++++..+.++|+..+.||+|+||.||+++. .+++.+|+|.++... ...+++.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 33455666788999999999999999999985 468899999886432 2346788999999999 69999999998853
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
.. .+.+...++||||+++|+|.++++.. .....+++..+..++.|+++||.|||+ .+++||||||+||+++++
T Consensus 87 ~~---~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~ 160 (286)
T cd06638 87 KD---VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTE 160 (286)
T ss_pred cc---cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCC
Confidence 21 12456789999999999999988642 224568899999999999999999998 699999999999999999
Q ss_pred CceEEeCCCCCccccCCCC----------c------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 LTAKLSGYNIPLPSKVRNT----------L------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~----------~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||+++....... + ... +.++|||||||++|||++|.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~ 226 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD 226 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCC
Confidence 9999999999865432110 0 112 67899999999999999984
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=243.31 Aligned_cols=177 Identities=18% Similarity=0.300 Sum_probs=148.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|++.+.||+|+||.||+|+. .++..|++|.+........+.+.+|+++++.++||||+++++++. .+..
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 83 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY--------WDGK 83 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE--------eCCe
Confidence 5677889999999999999995 458899999997655444577889999999999999999999875 2346
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++++|.+++.+ ....+++..+..++.|++.|++|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEEEEecCCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccce
Confidence 8999999999999988864 23468999999999999999999998 699999999999999999999999999986
Q ss_pred cccCCCC----------c------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... + ... +.++|||||||++|||++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~ 212 (292)
T cd06644 159 KNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 212 (292)
T ss_pred eccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCC
Confidence 4321100 0 112 66899999999999999983
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=241.42 Aligned_cols=176 Identities=18% Similarity=0.342 Sum_probs=145.7
Q ss_pred CCCCCCccccCCccceEEEEeC-CC---cEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DG---SRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.|+..+.||+|+||.||+|+.. ++ ..||||.++... ....++|..|++++++++||||+++++++. .
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--------~ 76 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT--------K 76 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC--------C
Confidence 4667899999999999999854 33 369999987532 223468999999999999999999999874 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++|+|.++++. ....+++.+++.++.|++.|++|||+ .+++||||||+||+++.++.+|++|||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg 151 (269)
T cd05065 77 SRPVMIITEFMENGALDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFG 151 (269)
T ss_pred CCceEEEEecCCCCcHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCc
Confidence 4568999999999999999974 23468999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCC---------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 607 IPLPSKVRNT---------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 607 la~~~~~~~~---------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
+++....... . ... +.++|||||||++||+++ |.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~ 209 (269)
T cd05065 152 LSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 209 (269)
T ss_pred cccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCC
Confidence 9875432110 1 233 789999999999999886 63
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=243.64 Aligned_cols=178 Identities=21% Similarity=0.365 Sum_probs=144.7
Q ss_pred CCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
+|+..+.||+|+||.||+|+.. ....+|+|.+..... ...+++.+|+++++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------- 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS------- 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-------
Confidence 4677899999999999999842 235788988864332 22457889999999999999999999874
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC---------------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCee
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK---------------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 583 (640)
.....+++|||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+++
T Consensus 74 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~iv 149 (290)
T cd05045 74 -QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLV 149 (290)
T ss_pred -cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCee
Confidence 3345799999999999999986421 12358899999999999999999998 7999
Q ss_pred ccCCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 584 GNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 584 HrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||||||+||++++++.+||+|||+++....... + +.. +.++||||||++++||+| |+
T Consensus 150 H~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 150 HRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred hhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999875421110 0 233 888999999999999998 63
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=239.35 Aligned_cols=177 Identities=23% Similarity=0.417 Sum_probs=151.0
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|++.+.||+|+||.||+|...++..||||.+.... ...+++.+|++++++++|||++++++++. ....
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 75 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCS--------EEEP 75 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeee--------cCCc
Confidence 46788899999999999999998778889999987543 34578999999999999999999998874 3345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++++|.+++... ....+++.++..++.+++.|++|||+ .+++|+||||+||++++++.+|++|||++.
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~ 151 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLAR 151 (261)
T ss_pred eEEEEeccCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccce
Confidence 89999999999999999752 23468999999999999999999998 699999999999999999999999999987
Q ss_pred cccCCC-----------Cc-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRN-----------TL-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~-----------~~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... .+ +.. +.++||||||++++|++| |
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g 201 (261)
T cd05034 152 LIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred eccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCC
Confidence 653211 01 233 889999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=245.53 Aligned_cols=173 Identities=18% Similarity=0.261 Sum_probs=139.5
Q ss_pred CCccccCCccceEEEEeC---CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
...||+|+||+||+|+.. +++.||+|.++... ....+.+|++++++++||||+++++++... .+...++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~~~l 77 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH------ADRKVWL 77 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecC------CCcEEEE
Confidence 468999999999999854 46789999986432 345678999999999999999999987521 3456899
Q ss_pred EEEccCCCCHhHHhhccC------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCCceEE
Q 006570 533 VLEHISNGSLRDYLTDWK------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKL 602 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl 602 (640)
||||+++ +|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07868 78 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEE
Confidence 9999965 8988875321 12358899999999999999999998 699999999999999 45689999
Q ss_pred eCCCCCccccCCCC-------------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT-------------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~-------------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++....... + + .. +.++||||+||++|||++|.
T Consensus 154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 213 (317)
T cd07868 154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 213 (317)
T ss_pred eecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCC
Confidence 99999976432110 0 2 23 78899999999999999983
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=242.92 Aligned_cols=176 Identities=21% Similarity=0.296 Sum_probs=150.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+++. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++. .
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ--------D 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE--------c
Confidence 3688889999999999999995 468999999987532 223467889999999999999999999875 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||
T Consensus 73 ~~~~~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 73 DSNLYLVMEYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred CCeEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCC
Confidence 4568999999999999999964 3568999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||||+++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 195 (290)
T cd05580 147 FAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGY 195 (290)
T ss_pred CccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 99765332111 223 78899999999999999984
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=214.62 Aligned_cols=172 Identities=20% Similarity=0.367 Sum_probs=146.4
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..++||+|.||+||+|+ ..+++.||+|+++.+. ........+|+.+++.++|+|||++++..- .+.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh--------sdk 74 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH--------SDK 74 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc--------cCc
Confidence 46667899999999999999 5668999999997643 344577899999999999999999998763 445
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..-+|+|||.. +|..|... -.+.++......++.|+++||.|+|+ .++.|||+||.|.||+.+|+.|++|||++
T Consensus 75 kltlvfe~cdq-dlkkyfds--lng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 75 KLTLVFEFCDQ-DLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred eeEEeHHHhhH-HHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchh
Confidence 68999999976 89888764 34568999999999999999999999 69999999999999999999999999999
Q ss_pred ccccCCCCc-----------------cCC--CCccceehhhHHHHHHh
Q 006570 609 LPSKVRNTL-----------------SFH--TDRSSLYKIILIICVIT 637 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~--~~~~DvwS~Gvvl~ell 637 (640)
+..+-+..- +.+ ++..|+||-||++.|+.
T Consensus 149 rafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaela 196 (292)
T KOG0662|consen 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196 (292)
T ss_pred hhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHh
Confidence 876533211 333 89999999999999986
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=240.55 Aligned_cols=179 Identities=17% Similarity=0.303 Sum_probs=149.5
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+ ..+++.+|||.+..... ...+++.+|+++++.++||||+++++++. .
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~ 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI--------E 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE--------e
Confidence 467788999999999999999 45789999998865322 23357889999999999999999999885 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+...+++|||+++++|.+++.... ....+++..++.++.+++.||+|||+ .+++|+||||+||+++.++.++|+||
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df 150 (267)
T cd08229 74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcc
Confidence 456899999999999999986422 24568999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++........ . +.. +.++||||||+++|||++|.
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~ 203 (267)
T cd08229 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred hhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCC
Confidence 99875432111 0 223 77899999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=234.57 Aligned_cols=178 Identities=20% Similarity=0.294 Sum_probs=148.9
Q ss_pred cCCCCCCccccCCccceEEEEeC---C--CcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT---D--GSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
..|+....||+|.||.||+|.-. + ...+|+|+++..+. .......+|+.+++.++||||+.+..++..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~----- 98 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS----- 98 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc-----
Confidence 46888999999999999999632 2 23799999986532 345678999999999999999999998862
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccC--CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC----
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWK--KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---- 597 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---- 597 (640)
.+..+++++||.+. +|.+.++..+ ....++...+..|+.||+.|+.|||++ =|+||||||.|||+..+
T Consensus 99 --~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 99 --HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred --cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCcc
Confidence 24569999999988 9999997432 345789999999999999999999994 69999999999999877
Q ss_pred CceEEeCCCCCccccCCCCc---------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 598 LTAKLSGYNIPLPSKVRNTL---------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~~---------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|.+||+|||+++.+...... .+. +.+.||||.||+..||+|-
T Consensus 173 G~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred CeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 99999999999987544321 344 9999999999999999973
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=238.52 Aligned_cols=172 Identities=22% Similarity=0.318 Sum_probs=139.1
Q ss_pred CccccCCccceEEEEeCC---CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.||+|+||.||+|+..+ +..+|+|.++.... .....+.+|+.++++++||||+++++++. +....++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~~~~l 72 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT--------EVTPYLL 72 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--------CCCCcEE
Confidence 368999999999998543 45799998875432 23357889999999999999999999874 3345799
Q ss_pred EEEccCCCCHhHHhhccCC--CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 533 VLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
||||+++|+|.++++.... ....++..+..++.|++.|++|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 73 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 73 VMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred EEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999999999975322 2346778888999999999999998 7999999999999999999999999999864
Q ss_pred ccCCCC------------c------c--------CC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNT------------L------S--------FH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~------------~------~--------~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... . . .. +.++||||||+++|||++ |
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g 206 (269)
T cd05087 150 KYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELG 206 (269)
T ss_pred ccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCC
Confidence 322110 0 0 12 678999999999999996 6
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=238.30 Aligned_cols=177 Identities=21% Similarity=0.345 Sum_probs=151.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|+..+.||+|+||.||+|.. .+++.+++|.+........+.+.+|++++++++||||+++++++. .+..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~~ 74 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL--------RRDK 74 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEE--------eCCE
Confidence 5788889999999999999995 457889999998665555678999999999999999999999875 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.+++|||+++++|.+++.. ....+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++.
T Consensus 75 ~~l~~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQV--TRGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEEEEeCCCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccch
Confidence 8999999999999999864 23568899999999999999999998 699999999999999999999999999986
Q ss_pred cccCCC--------C--c-------cC---C-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRN--------T--L-------SF---H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~--------~--~-------~~---~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... . . .. . +.++||||||+++|||+||.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~ 201 (262)
T cd06613 150 QLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQ 201 (262)
T ss_pred hhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCC
Confidence 543211 0 0 22 3 77899999999999999984
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=237.96 Aligned_cols=145 Identities=22% Similarity=0.268 Sum_probs=126.7
Q ss_pred CCCCCccccCCccceEEEEeCC-CcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|...+.||.|.-|+||.++..+ +..+|+|++.+... +...+...|.++|+.++||.++.+|+.+. ...
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe--------t~~ 150 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE--------TDK 150 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee--------ccc
Confidence 3446789999999999999754 58999999976432 22356677899999999999999998773 567
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..+++||||+||+|..+.++ +....+++..+..++.+|+-||+|||- .|||.|||||+|||+-++|++-|+||-++
T Consensus 151 ~~cl~meyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS 226 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLS 226 (459)
T ss_pred eeEEEEecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeecccc
Confidence 78999999999999998876 567789999999999999999999998 89999999999999999999999999886
Q ss_pred c
Q 006570 609 L 609 (640)
Q Consensus 609 ~ 609 (640)
.
T Consensus 227 ~ 227 (459)
T KOG0610|consen 227 L 227 (459)
T ss_pred c
Confidence 4
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=238.31 Aligned_cols=175 Identities=22% Similarity=0.353 Sum_probs=147.5
Q ss_pred CCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
+|+..+.||+|+||+||+|...+++.+|+|.++..... ..+.+.+|++++++++|+||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------- 72 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-------- 72 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee--------
Confidence 46778999999999999999878999999998753211 1246889999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~df 146 (265)
T cd06631 73 DDNTISIFMEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDF 146 (265)
T ss_pred cCCeEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccc
Confidence 34568999999999999999964 3457899999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCC--------------CC--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVR--------------NT--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~--------------~~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++...... .. . +.. +.++|||||||+++||++|.
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~ 205 (265)
T cd06631 147 GCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205 (265)
T ss_pred hhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCC
Confidence 998653110 00 0 223 78999999999999999984
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=236.72 Aligned_cols=175 Identities=20% Similarity=0.366 Sum_probs=151.3
Q ss_pred cCCCCCCccccCCccceEEEEeCC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|+..+.||+|+||.||+|+..+ +..+++|.+..... .+++.+|++++++++||||+++++++. ....
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~~ 72 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF--------KNTD 72 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee--------cCCc
Confidence 578889999999999999999654 78999999875433 678999999999999999999999885 3356
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.+++|||+++++|.+++.. ....+++..+..++.|++.|+.|||+ .+++||||+|+||++++++.+||+|||++.
T Consensus 73 ~~l~~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 73 LWIVMEYCGAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEEEEecCCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccch
Confidence 8999999999999999964 24568999999999999999999998 699999999999999999999999999987
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~ 196 (256)
T cd06612 148 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196 (256)
T ss_pred hcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCC
Confidence 65432200 233 78999999999999999984
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=245.14 Aligned_cols=178 Identities=20% Similarity=0.362 Sum_probs=147.0
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
.++|...+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---- 109 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT---- 109 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe----
Confidence 35688899999999999999973 1345799999875432 2346789999999999 7999999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....++||||+++|+|.++++.. ....+++.+++.++.+++.||+|||+ .+|+|+||||+||+++.++.+|
T Consensus 110 ----~~~~~~lv~e~~~~~~L~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 110 ----IGGPILVITEYCCYGDLLNFLRRK-RESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ----cCCceEEEEEcCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEE
Confidence 334589999999999999999752 23348999999999999999999998 6999999999999999999999
Q ss_pred EeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 602 LSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 602 l~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++|||+++....... . ... +.++|||||||++|||+| |
T Consensus 182 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g 240 (302)
T cd05055 182 ICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 240 (302)
T ss_pred ECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCC
Confidence 999999975432110 0 223 788999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=236.59 Aligned_cols=176 Identities=20% Similarity=0.321 Sum_probs=149.4
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||.++ ..+++.+++|.+.... ....+++.+|++++++++|+||+++++++. ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~ 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM--------DDN 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe--------cCC
Confidence 47788999999999999998 4568899999987542 334567889999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..+++|||+++|+|.+++... ....+++.++..++.|++.|++|||+ .+++||||||+||++++++.+||+|||++
T Consensus 73 ~~~~~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 73 TLLIEMEYANGGTLYDKIVRQ-KGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred eEEEEEEecCCCcHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcce
Confidence 689999999999999999752 24568999999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhc
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
......... +.. +.++||||||++++||++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g 197 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTL 197 (256)
T ss_pred EEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHC
Confidence 765332200 233 7889999999999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=240.04 Aligned_cols=176 Identities=19% Similarity=0.378 Sum_probs=146.4
Q ss_pred cCCCCCCccccCCccceEEEEeC-CC---cEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DG---SRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+.. ++ ..+|+|.++... ....+++..|++++++++|||++++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 76 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-------- 76 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc--------
Confidence 46777899999999999999864 33 379999987542 223467899999999999999999999884
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ....+++.++..++.|++.|++|||+ .+++||||||+||++++++.+|++||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 77 KFKPAMIITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred cCCCcEEEEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCC
Confidence 33457999999999999999974 23568999999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|++........ + ... +.++|||||||++|||++ |
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g 207 (268)
T cd05063 152 GLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFG 207 (268)
T ss_pred ccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCC
Confidence 99875432110 1 233 788999999999999987 6
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=243.61 Aligned_cols=193 Identities=23% Similarity=0.333 Sum_probs=157.0
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEe
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~ 518 (640)
++++++..++++|+..+.||+|+||.||++.. .+++.+|+|.+.... ...+++.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 44566666788999999999999999999995 568899999986432 2346788899999999 89999999999863
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
... ..+...++||||+++|+|.++++.. .....+++..++.++.|++.||+|||+ .+++||||||+||+++++
T Consensus 91 ~~~---~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~ 164 (291)
T cd06639 91 ADK---LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTE 164 (291)
T ss_pred ccc---cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCC
Confidence 211 1345689999999999999998642 134568999999999999999999998 699999999999999999
Q ss_pred CceEEeCCCCCccccCCCC----------c--------c----CC-CCccceehhhHHHHHHhhcC
Q 006570 598 LTAKLSGYNIPLPSKVRNT----------L--------S----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~----------~--------~----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||++........ . . .. +.++|||||||++|||++|.
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~ 230 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGD 230 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCC
Confidence 9999999999875432110 0 0 12 68999999999999999983
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=244.90 Aligned_cols=178 Identities=19% Similarity=0.382 Sum_probs=146.0
Q ss_pred hcCCCCCCccccCCccceEEEEeC--------CCcEEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
..+|++.+.||+|+||.||+|+.. ++..||+|.++... ....+++.+|+++++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-- 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe--
Confidence 456778899999999999999731 24579999987432 23346789999999999 8999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .+++|||
T Consensus 92 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~d 162 (304)
T cd05101 92 ------QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRD 162 (304)
T ss_pred ------cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecc
Confidence 33458999999999999999975321 2457889999999999999999998 6999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
|||+||++++++.+||+|||+++....... + +.. +.++||||||+++|||++
T Consensus 163 lkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 234 (304)
T cd05101 163 LAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234 (304)
T ss_pred cccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHc
Confidence 999999999999999999999875432110 0 223 788999999999999998
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=246.08 Aligned_cols=177 Identities=19% Similarity=0.387 Sum_probs=145.9
Q ss_pred cCCCCCCccccCCccceEEEEeC--------CCcEEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
++|.+.+.||+|+||.||+++.. +...+|+|.++... ....+++.+|+++++++ +||||+++++++.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~--- 94 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT--- 94 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe---
Confidence 56888999999999999999742 23469999997542 22345788899999999 7999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 587 (640)
.....|+||||+++|+|.+++..... ...+++.++++++.|++.||+|||+ .+++||||
T Consensus 95 -----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dl 166 (307)
T cd05098 95 -----QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDL 166 (307)
T ss_pred -----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccc
Confidence 33468999999999999999975321 2358899999999999999999998 69999999
Q ss_pred CCCceeecCCCceEEeCCCCCccccCCC------------Cc-------cCC-CCccceehhhHHHHHHhh
Q 006570 588 KTENILLDKALTAKLSGYNIPLPSKVRN------------TL-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 588 k~~NILl~~~~~~kl~DfGla~~~~~~~------------~~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+||++++++.+||+|||+++...... .+ +.. +.++|||||||++|||++
T Consensus 167 kp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~ 237 (307)
T cd05098 167 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237 (307)
T ss_pred cHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHc
Confidence 9999999999999999999987542110 01 233 889999999999999998
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-27 Score=242.10 Aligned_cols=179 Identities=18% Similarity=0.330 Sum_probs=147.7
Q ss_pred hcCCCCCCccccCCccceEEEEeCC-----------------CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccce
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD-----------------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVS 511 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 511 (640)
..+|++.+.||+|+||.||+|+..+ +..||+|.+..... ...+++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578889999999999999988532 24689999875432 23567899999999999999999
Q ss_pred eeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC--------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCee
Q 006570 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK--------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (640)
Q Consensus 512 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 583 (640)
+++++. .+...+++|||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+++
T Consensus 84 ~~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~ 152 (296)
T cd05051 84 LLGVCT--------VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFV 152 (296)
T ss_pred EEEEEe--------cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCcc
Confidence 999885 2356899999999999999997532 12368999999999999999999998 6999
Q ss_pred ccCCCCCceeecCCCceEEeCCCCCccccCCC------------Cc-------cCC-CCccceehhhHHHHHHhhc
Q 006570 584 GNNLKTENILLDKALTAKLSGYNIPLPSKVRN------------TL-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 584 HrDlk~~NILl~~~~~~kl~DfGla~~~~~~~------------~~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
||||||+||+++.++.+||+|||+++...... .+ ... +.++|||||||++|||+++
T Consensus 153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 228 (296)
T cd05051 153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTL 228 (296)
T ss_pred ccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhc
Confidence 99999999999999999999999987542211 00 224 8899999999999999984
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=240.55 Aligned_cols=176 Identities=19% Similarity=0.245 Sum_probs=148.5
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++|||++++++++. ..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~ 72 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR--------RK 72 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe--------eC
Confidence 36788899999999999999964 58999999986532 223466889999999999999999999885 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++++.|..++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 73 ~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 73 RKLHLVFEYCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred CEEEEEEeccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECcccc
Confidence 568999999999888887743 3458999999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . + .. +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~ 198 (286)
T cd07847 147 ARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQ 198 (286)
T ss_pred ceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCC
Confidence 976533220 0 2 23 78999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=241.53 Aligned_cols=178 Identities=17% Similarity=0.339 Sum_probs=146.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|+..+.||+|+||.||+|... ++..||+|.+..... .....+.+|+++++.++||||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 356788899999999999999853 246899999864432 23457889999999999999999999875
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCC-------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK-------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
.....++||||+++|+|.+++..... ...++|..++.++.|++.||+|||+ .+++||||||+||+++
T Consensus 80 ---~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~ 153 (277)
T cd05032 80 ---TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVA 153 (277)
T ss_pred ---CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEc
Confidence 34568999999999999999975321 2347899999999999999999998 7999999999999999
Q ss_pred CCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 596 KALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+++.+||+|||+++....... + ... +.++|||||||++||++|
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 216 (277)
T cd05032 154 EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216 (277)
T ss_pred CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhc
Confidence 999999999999875422110 0 233 889999999999999998
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=243.45 Aligned_cols=175 Identities=18% Similarity=0.389 Sum_probs=150.2
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|+..+.||.|+||.||+|. ..+++.||+|.+........+.+.+|+++++.++|||++++++++. .+..
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~ 90 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL--------VGDE 90 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe--------cCce
Confidence 457888999999999999998 4578999999997655555678899999999999999999999885 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++.. ..+++.++..++.+++.|++|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 91 LFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEEEEecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccch
Confidence 8999999999999999853 358999999999999999999998 799999999999999999999999999987
Q ss_pred cccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... + +.. +.++|||||||++|||++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred hcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 5422110 0 233 78899999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=243.18 Aligned_cols=175 Identities=21% Similarity=0.299 Sum_probs=143.4
Q ss_pred CCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
|...+.||+|+||.||+|+.. ++..||+|+++..... ..+.+.+|+++++.++||||+++++++.
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-------- 78 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-------- 78 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc--------
Confidence 455688999999999999853 2478999999754322 2356889999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.....++++||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Ni 155 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNV 155 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhhe
Confidence 3345899999999999999985311 12458899999999999999999998 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
++++++.+||+|||+++....... + ... +.++|||||||++|||++
T Consensus 156 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 221 (283)
T cd05091 156 LVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221 (283)
T ss_pred EecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHc
Confidence 999999999999999875422110 0 233 889999999999999998
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=237.43 Aligned_cols=178 Identities=20% Similarity=0.277 Sum_probs=147.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-----CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||.||+|.. .++..||+|++..... ...+.+.+|++++++++||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 75 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD------ 75 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc------
Confidence 3688899999999999999985 4688999999864321 123468889999999999999999998752
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
..+...+++|||+++++|.+++.. ...+++...+.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 76 ~~~~~~~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 76 RAEKTLTIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CCCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEcc
Confidence 123567899999999999999964 3458899999999999999999998 6999999999999999999999999
Q ss_pred CCCCccccCCC-----------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRN-----------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~-----------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++...... . + +.. +.++|||||||++|||++|.
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~ 206 (266)
T cd06651 150 FGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK 206 (266)
T ss_pred CCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCC
Confidence 99986532110 0 0 233 78999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=241.13 Aligned_cols=179 Identities=20% Similarity=0.346 Sum_probs=149.8
Q ss_pred cCCCCCCccccCCccceEEEEeC-----CCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
..|+..+.||+|+||.||+|++. ++..||||.++..... ..+++.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~----- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP----- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC-----
Confidence 34667789999999999999853 3678999999755432 357899999999999999999999987521
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.+...++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|
T Consensus 79 -~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 79 -GGRSLRLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred -CCCceEEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcc
Confidence 244589999999999999999752 3358999999999999999999998 6999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||++........ . ... +.++||||||++++||+||+
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~ 209 (284)
T cd05038 153 FGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYG 209 (284)
T ss_pred cccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccC
Confidence 999976542110 0 233 78899999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=241.08 Aligned_cols=170 Identities=23% Similarity=0.388 Sum_probs=139.8
Q ss_pred CccccCCccceEEEEeCC--------CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++.. +.
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--------~~ 72 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC--------GD 72 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe--------CC
Confidence 469999999999998532 23488888865544445788999999999999999999999862 34
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc--------e
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--------A 600 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--------~ 600 (640)
..++||||+++|+|.++++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +
T Consensus 73 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 73 ESIMVQEYVKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred CcEEEEecCCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceE
Confidence 579999999999999999752 3368999999999999999999998 79999999999999988765 5
Q ss_pred EEeCCCCCccccCCCCc-------------c-CC-CCccceehhhHHHHHHhhc
Q 006570 601 KLSGYNIPLPSKVRNTL-------------S-FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~-------------~-~~-~~~~DvwS~Gvvl~elltG 639 (640)
|++|||++......... + .. +.++|||||||++|||++|
T Consensus 148 ~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 201 (258)
T cd05078 148 KLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201 (258)
T ss_pred EecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence 99999998654322110 2 23 7789999999999999998
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=235.99 Aligned_cols=168 Identities=20% Similarity=0.325 Sum_probs=140.7
Q ss_pred CccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+... +..+|+|.+..... ...+++.+|++++++++||||+++++++. +...+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---------~~~~~ 71 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK---------GEPLM 71 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc---------CCceE
Confidence 469999999999997422 26899999875433 23567899999999999999999999763 23479
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 72 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 72 LVMELAPLGPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EEEEeCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEecccccccee
Confidence 99999999999999974 3368999999999999999999998 69999999999999999999999999998755
Q ss_pred cCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 612 KVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 612 ~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
..... . ... +.++|||||||++|||++ |
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g 195 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYG 195 (257)
T ss_pred ecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCC
Confidence 22211 0 233 779999999999999997 5
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=241.88 Aligned_cols=177 Identities=20% Similarity=0.324 Sum_probs=146.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.+|...+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++|+||+++++++. .+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--------~~ 75 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH--------TK 75 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe--------cC
Confidence 46788899999999999999984 4688999999875432 23356789999999999999999999875 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ +++.+++.. ....+.+..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 76 ETLTFVFEYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred CeEEEEEeccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEecccc
Confidence 56899999996 688877753 23457888899999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++....... . + .. +.++|||||||++|||+||+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 201 (291)
T cd07870 150 ARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ 201 (291)
T ss_pred ccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 875422110 0 1 12 67899999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=242.78 Aligned_cols=175 Identities=22% Similarity=0.351 Sum_probs=147.4
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC-----ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH-----LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
+|+..+.||+|+||.||+|.. .+++.||||.++..... ....+..|++++++++|+||+++++++.
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------- 72 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-------- 72 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee--------
Confidence 367788999999999999995 46899999999754322 2356778999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+ +|+|.++++.. ...+++..++.++.|+++||+|||+ .+|+|+||||+||+++.++.+||+||
T Consensus 73 ~~~~~~lv~e~~-~~~L~~~i~~~--~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 73 HKSNINLVFEFM-ETDLEKVIKDK--SIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred cCCEEEEEEccc-CCCHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccc
Confidence 345689999999 89999999742 2368999999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ + .. +.++|||||||+++||++|.
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~ 200 (298)
T cd07841 147 GLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200 (298)
T ss_pred eeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999765432110 1 23 78899999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-27 Score=244.04 Aligned_cols=173 Identities=18% Similarity=0.266 Sum_probs=139.5
Q ss_pred CCccccCCccceEEEEeC---CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
...||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++... .+...++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~~~l 77 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSH------SDRKVWL 77 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEecc------CCCeEEE
Confidence 467999999999999854 35789999886432 345688999999999999999999988531 3456899
Q ss_pred EEEccCCCCHhHHhhcc------CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCCceEE
Q 006570 533 VLEHISNGSLRDYLTDW------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKL 602 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl 602 (640)
||||+++ +|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07867 78 LFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEE
Confidence 9999975 888887531 122358899999999999999999998 799999999999999 56689999
Q ss_pred eCCCCCccccCCCC-------------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT-------------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~-------------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++....... + + .. +.++|||||||++|||+||.
T Consensus 154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~ 213 (317)
T cd07867 154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 213 (317)
T ss_pred eeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCC
Confidence 99999976532110 0 2 23 78899999999999999984
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=241.92 Aligned_cols=177 Identities=16% Similarity=0.264 Sum_probs=148.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||+||+++. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++. ...
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 76 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL--------NEN 76 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe--------cCC
Confidence 4566778999999999999994 468899999886542 334578899999999999999999999885 335
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ...+++..+..++.+++.||.|||+. .+++||||||+||++++++.++|+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 77 NICMCMEFMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred EEEEEEecCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 68999999999999999864 34689999999999999999999963 58999999999999999999999999998
Q ss_pred ccccCCC------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... +. +.. +.++|||||||++||++||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~ 199 (284)
T cd06620 152 GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199 (284)
T ss_pred cchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCC
Confidence 6532111 00 233 78999999999999999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=244.52 Aligned_cols=172 Identities=20% Similarity=0.371 Sum_probs=145.4
Q ss_pred CCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 454 DPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.....||+|+||.||++.. .++..||||.+........+.+.+|+..+++++||||+++++.+. .++..++
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~--------~~~~~~l 96 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL--------VGDELWV 96 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee--------cCCeEEE
Confidence 3346799999999999984 468899999987654444567899999999999999999999875 3456899
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
||||+++++|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 97 v~e~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (292)
T cd06658 97 VMEFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 169 (292)
T ss_pred EEeCCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcc
Confidence 9999999999998853 358899999999999999999998 699999999999999999999999999986542
Q ss_pred CCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... + +.. +.++||||||+++|||++|+
T Consensus 170 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~ 215 (292)
T cd06658 170 KEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215 (292)
T ss_pred cccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 1111 0 223 88999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=236.05 Aligned_cols=173 Identities=21% Similarity=0.412 Sum_probs=145.6
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||++.. +++.||+|.++... ..+.+.+|++++++++|||++++++++.. ...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------~~~ 73 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH---------NGL 73 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC---------CCc
Confidence 4578889999999999999985 57889999986432 34678999999999999999999998741 226
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++... ....+++..++.++.|++.|++|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 74 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred EEEEECCCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCcccee
Confidence 8999999999999999752 23458899999999999999999998 7999999999999999999999999999875
Q ss_pred ccCCCCc--------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNTL--------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
....... +.. +.++|||||||++|||++ |
T Consensus 150 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g 194 (254)
T cd05083 150 GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYG 194 (254)
T ss_pred ccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCC
Confidence 4321110 233 789999999999999997 5
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=238.34 Aligned_cols=172 Identities=22% Similarity=0.300 Sum_probs=136.5
Q ss_pred CccccCCccceEEEEeCCC---cEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 457 NLIGEGSQGQLYKGFLTDG---SRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.||+|+||.||+|+..++ ..+++|.++... ....+.+.+|+++++.++||||++++++|. .....++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~--------~~~~~~l 72 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV--------EAIPYLL 72 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec--------CCCccEE
Confidence 3699999999999985433 346667665432 234568999999999999999999999885 3345899
Q ss_pred EEEccCCCCHhHHhhccCC-CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 533 VLEHISNGSLRDYLTDWKK-KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
||||+++|+|.+++++... ....++...+.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||++...
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~ 149 (268)
T cd05086 73 VFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSR 149 (268)
T ss_pred EEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEeccccccccc
Confidence 9999999999999975321 2346677888999999999999998 69999999999999999999999999997532
Q ss_pred cCC-------------CCc-------------cCC-CCccceehhhHHHHHHhhc
Q 006570 612 KVR-------------NTL-------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 612 ~~~-------------~~~-------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
... ... ... +.++|||||||++|||+++
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~ 204 (268)
T cd05086 150 YKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFEN 204 (268)
T ss_pred CcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhC
Confidence 110 000 012 6789999999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-27 Score=237.80 Aligned_cols=171 Identities=23% Similarity=0.407 Sum_probs=138.8
Q ss_pred CccccCCccceEEEEeCC-Cc--EEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLTD-GS--RVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|+..+ +. .+|+|.++... ....+.+.+|++++.++ +||||+++++++. .....+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--------~~~~~~ 72 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE--------HRGYLY 72 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe--------cCCCce
Confidence 468999999999999643 43 47888887432 23346788999999999 8999999999885 334579
Q ss_pred EEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 532 LVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
+||||+++|+|.++++... ....+++.+++.++.|++.|++|||+ .+++||||||+||++++++
T Consensus 73 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~ 149 (270)
T cd05047 73 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENY 149 (270)
T ss_pred EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCC
Confidence 9999999999999997532 12357899999999999999999998 7999999999999999999
Q ss_pred ceEEeCCCCCccccCC-----C----Cc-------cCC-CCccceehhhHHHHHHhh
Q 006570 599 TAKLSGYNIPLPSKVR-----N----TL-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~-----~----~~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
.+|++|||++...... . .+ ... +.++|||||||+++||++
T Consensus 150 ~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~ 206 (270)
T cd05047 150 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206 (270)
T ss_pred eEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHc
Confidence 9999999998532110 0 01 223 789999999999999997
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=244.63 Aligned_cols=178 Identities=19% Similarity=0.369 Sum_probs=146.0
Q ss_pred hcCCCCCCccccCCccceEEEEeC--------CCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|.+.+.||+|+||.||+|+.. ....+|+|.++.... ...+++.+|+++++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT-- 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc--
Confidence 356778899999999999999731 245799999874322 2345788999999999 6999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++||||+++|+|.+++.... ....+++.++..++.|++.||+|||+ .+++|||
T Consensus 89 ------~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~d 159 (314)
T cd05099 89 ------QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRD 159 (314)
T ss_pred ------cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecc
Confidence 3345899999999999999997532 12458999999999999999999998 6999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
|||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||++
T Consensus 160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~ 231 (314)
T cd05099 160 LAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231 (314)
T ss_pred ccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHh
Confidence 999999999999999999999975432110 1 233 889999999999999998
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=250.50 Aligned_cols=171 Identities=19% Similarity=0.298 Sum_probs=142.4
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...+|.+.+.||+|+||.||+|+.. +++.||+|..... ....|+.++++++||||+++++++. .+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 129 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLV--------SG 129 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEE--------eC
Confidence 3457999999999999999999954 5778999975422 2356899999999999999999886 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+. |+|.+++.. ....+++..++.|+.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 130 AITCMVLPHYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred CeeEEEEEccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcc
Confidence 45799999995 699998864 34568999999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCC-------Cc---------cCC-CCccceehhhHHHHHHhhc
Q 006570 608 PLPSKVRN-------TL---------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 608 a~~~~~~~-------~~---------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++...... +. +.. +.++|||||||++|||+++
T Consensus 204 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~ 252 (357)
T PHA03209 204 AQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAY 252 (357)
T ss_pred ccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHc
Confidence 97532111 00 233 8899999999999999974
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=243.00 Aligned_cols=174 Identities=21% Similarity=0.405 Sum_probs=142.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCc----EEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGS----RVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||.||+|+. .++. .||+|.+..... ....++.+|+.++++++||||++++|+|..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------ 80 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS------ 80 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC------
Confidence 4567789999999999999984 3444 478888864332 223478899999999999999999998851
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++++||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 81 ---~~~~~v~e~~~~g~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~D 152 (303)
T cd05110 81 ---PTIQLVTQLMPHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITD 152 (303)
T ss_pred ---CCceeeehhcCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcc
Confidence 225799999999999999874 23458899999999999999999998 6999999999999999999999999
Q ss_pred CCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 605 YNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 605 fGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+++....... . +.. +.++|||||||++|||++
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t 206 (303)
T cd05110 153 FGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206 (303)
T ss_pred ccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHh
Confidence 999975432110 0 233 788999999999999987
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=260.59 Aligned_cols=182 Identities=16% Similarity=0.256 Sum_probs=143.2
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCc------ccceeeeEEE
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR------HLVSILGHCI 517 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~g~~~ 517 (640)
++....++|++.+.||+|+||+||+|+. .+++.||||+++... ...+++..|+++++.++|. +++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 4445568899999999999999999985 457899999997432 2335566788777777554 5788887764
Q ss_pred ecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
. .....++|||++ +++|.+++.+ ...+++..+..|+.|++.||+|||++ .+||||||||+|||++.+
T Consensus 202 ~-------~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 202 N-------ETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETS 268 (467)
T ss_pred c-------CCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecC
Confidence 1 234689999998 6799998864 35689999999999999999999973 489999999999999876
Q ss_pred C----------------ceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 L----------------TAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ~----------------~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+ .+||+|||.+......... +.. +.++|||||||++|||+||.
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCC
Confidence 5 4999999987643221110 333 88999999999999999985
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=239.18 Aligned_cols=175 Identities=19% Similarity=0.410 Sum_probs=146.0
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCc----EEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS----RVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||.||+|... +|+ .||+|..+.... ...+++.+|++++++++||||++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 45677899999999999999853 333 589998875432 234678899999999999999999999852
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++||||+++|+|.++++. ....+++..+..++.|++.|++|||+ .+++||||||+||++++++.+||+|
T Consensus 81 ---~~~~~v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 ---SQVQLITQLMPLGCLLDYVRN--HKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred ---CceEEEEecCCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECC
Confidence 347999999999999999975 23458999999999999999999998 7999999999999999999999999
Q ss_pred CCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... . ... +.++|||||||++||++| |
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g 208 (279)
T cd05057 153 FGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFG 208 (279)
T ss_pred CcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCC
Confidence 999976432111 0 223 789999999999999998 6
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=241.33 Aligned_cols=178 Identities=20% Similarity=0.360 Sum_probs=147.1
Q ss_pred hcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|+..+.||+|+||.||+|+.. ++..||+|.+..... ...+++.+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~----- 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA----- 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-----
Confidence 457888999999999999999853 467899999875422 23467899999999999999999999874
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccC-------------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCee
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK-------------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 583 (640)
.+...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+++
T Consensus 79 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~ 152 (288)
T cd05050 79 ---VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFV 152 (288)
T ss_pred ---CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCee
Confidence 3345799999999999999997421 12347889999999999999999998 6999
Q ss_pred ccCCCCCceeecCCCceEEeCCCCCccccCCC------C------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 584 GNNLKTENILLDKALTAKLSGYNIPLPSKVRN------T------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 584 HrDlk~~NILl~~~~~~kl~DfGla~~~~~~~------~------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||||||+||++++++.+||+|||+++...... . + +.. +.++|||||||++|||++
T Consensus 153 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~ 227 (288)
T cd05050 153 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 227 (288)
T ss_pred cccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999987532110 0 0 233 889999999999999987
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=245.49 Aligned_cols=177 Identities=21% Similarity=0.314 Sum_probs=152.3
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC---ChHHHHHHHHHHhcCC-CcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~ 523 (640)
....|+..+.||+|.||.||+++.+ +|+.+|+|.+.+.... ..+.+.+|+++|+++. |||||.+.+.+.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e------ 106 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE------ 106 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE------
Confidence 3456888899999999999999954 4999999999865433 3468999999999998 999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC----Cc
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA----LT 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~----~~ 599 (640)
+...+++|||++.+|.|++.+... .+++.....++.|++.|++|||+ .+|+|||+||+|+|+... +.
T Consensus 107 --~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 107 --DPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred --cCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCc
Confidence 445799999999999999999753 38999999999999999999999 799999999999999643 57
Q ss_pred eEEeCCCCCccccCCCCc---------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL---------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~---------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|++|||++......... . .. +..+||||.||++|.|++|.
T Consensus 178 ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~ 235 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGV 235 (382)
T ss_pred EEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCC
Confidence 999999999887662211 2 34 99999999999999999984
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-27 Score=236.35 Aligned_cols=175 Identities=22% Similarity=0.388 Sum_probs=146.3
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC---------hHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL---------PQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
+|.....||+|+||.||+|.. .+++.||+|.+....... .+.+.+|++++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 366788999999999999984 468899999886543221 246888999999999999999999875
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.+|
T Consensus 77 ----~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 77 ----DADHLNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ----eCCccEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEE
Confidence 33567999999999999999964 3568899999999999999999998 6999999999999999999999
Q ss_pred EeCCCCCccccCCC--------------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN--------------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~--------------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||.++...... . . +.. +.++|||||||++|||++|.
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 209 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCC
Confidence 99999987654210 0 0 223 77899999999999999984
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-27 Score=236.82 Aligned_cols=176 Identities=16% Similarity=0.323 Sum_probs=148.4
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||++...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++. . ..
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~-~~ 74 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT--------K-EP 74 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEc--------C-CC
Confidence 45788899999999999999997778889999887432 23467899999999999999999998874 1 34
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.+++|||+++|+|.+++... ....+++..++.++.+++.||+|||+ .+++||||||+||+++.++.+||+|||.+.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 150 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCccee
Confidence 79999999999999999752 34567899999999999999999998 699999999999999999999999999986
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
....... . ... +.++|||||||++||++| |
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 151 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred eccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcC
Confidence 5432110 0 223 778999999999999998 5
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-27 Score=240.90 Aligned_cols=176 Identities=22% Similarity=0.377 Sum_probs=146.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|++++++++||||+++++++. ...
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 76 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH--------TKK 76 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe--------cCC
Confidence 56888899999999999999954 688999999875432 22356778999999999999999999874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++ +|.+++... ...+++.....++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 77 ~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 77 TLTLVFEYLDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred eEEEEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccc
Confidence 68999999985 999998742 3468899999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... . . + .. +.++||||+||++|||++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~ 201 (291)
T cd07844 151 RAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201 (291)
T ss_pred cccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCC
Confidence 6532110 0 0 2 22 78899999999999999984
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-27 Score=238.45 Aligned_cols=178 Identities=19% Similarity=0.322 Sum_probs=147.0
Q ss_pred cCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|+..+.||+|+||.||+|+.. +...|++|.+...... ..+++.+|++++++++||||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------ 78 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR------ 78 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC------
Confidence 56788899999999999999853 2457999988654332 3467999999999999999999999874
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCC------CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKK------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
.....++||||+++|+|.++++..... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++++
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 79 --EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQ 153 (275)
T ss_pred --CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCC
Confidence 334579999999999999999753321 268999999999999999999998 699999999999999999
Q ss_pred CceEEeCCCCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 598 LTAKLSGYNIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+.+|++|||++........ + +.. +.++||||||+++|||+++
T Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~ 214 (275)
T cd05046 154 REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ 214 (275)
T ss_pred CcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999864321110 0 233 7889999999999999983
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=245.42 Aligned_cols=174 Identities=17% Similarity=0.252 Sum_probs=141.7
Q ss_pred CCCccccC--CccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 455 PTNLIGEG--SQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 455 ~~~~ig~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
..++||+| +|++||+++. .+|+.||+|+++.... ...+.+.+|+++++.++||||+++++++. .+..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~--------~~~~ 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI--------ADNE 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE--------ECCE
Confidence 35789999 6789999984 5789999999975422 22356788999999999999999999986 3356
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++++|||...
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTH-FMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEEEEeccCCCcHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhh
Confidence 89999999999999999642 23458999999999999999999998 799999999999999999999999998643
Q ss_pred cccCC-----------CC------c-------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVR-----------NT------L-------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~-----------~~------~-------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... .. + . .. +.++|||||||++|||++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~ 207 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 207 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCC
Confidence 22100 00 0 1 22 78999999999999999984
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=247.57 Aligned_cols=177 Identities=22% Similarity=0.329 Sum_probs=151.6
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
....|.+...||+|.|+.|..|++ .++..||||.+.+.... ..+.+.+|+++|+.++|||||+++.+..
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-------- 125 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-------- 125 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee--------
Confidence 456788899999999999999994 46899999999865432 2356899999999999999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....+|+||||+.+|.+++|+.. .....+.....++.|+..|++|||+ ..|||||||++|||+|.++++||+||
T Consensus 126 t~~~lylV~eya~~ge~~~yl~~---~gr~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 126 TEATLYLVMEYASGGELFDYLVK---HGRMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred ecceeEEEEEeccCchhHHHHHh---cccchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeecc
Confidence 45679999999999999999975 3345568889999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG 639 (640)
|++.+....... +.. ++++|+||+|+++|-|+.|
T Consensus 200 gfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~G 251 (596)
T KOG0586|consen 200 GFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEG 251 (596)
T ss_pred ccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeec
Confidence 999876533211 222 9999999999999999887
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-27 Score=235.63 Aligned_cols=177 Identities=16% Similarity=0.277 Sum_probs=148.7
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|+..+.||+|+||.||+++. .+++.+|+|.++... ....+.+.+|++++++++||||+++++++. ++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 72 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE--------ADGH 72 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--------ECCE
Confidence 467789999999999999994 468899999986432 234567889999999999999999999874 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ....+++...+.++.|++.||.|||+ .+|+|+||||+||++++++.++++|||.+.
T Consensus 73 ~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 73 LYIVMEYCDGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEEEEeeCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcce
Confidence 89999999999999998642 34457899999999999999999998 799999999999999999999999999987
Q ss_pred cccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . +.. +.++||||||+++|||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~ 197 (255)
T cd08219 149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLK 197 (255)
T ss_pred eecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhcc
Confidence 5532211 0 233 78999999999999999983
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=238.58 Aligned_cols=175 Identities=19% Similarity=0.303 Sum_probs=144.9
Q ss_pred cCCCCCCccccCCccceEEEEeCC----CcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|...+ ...||||...... ....+.+.+|++++++++||||+++++++.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------- 77 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-------- 77 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc--------
Confidence 457778999999999999998533 2469999887543 234567999999999999999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++||||+++|+|.+++... ...+++..++.++.+++.||+|||+ .+++||||||+||+++.++.+||+||
T Consensus 78 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 78 -ENPVWIVMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred -CCCcEEEEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccC
Confidence 13368999999999999999742 3458999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 606 NIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 606 Gla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+++....... + ... +.++||||||++++|+++ |
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 205 (270)
T cd05056 152 GLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLG 205 (270)
T ss_pred ceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcC
Confidence 99875422110 0 223 788999999999999886 6
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-27 Score=239.25 Aligned_cols=193 Identities=21% Similarity=0.365 Sum_probs=155.7
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEe
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCIL 518 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~ 518 (640)
.++.++..+.+.|+..+.||+|+||.||+|+. .+++.+|+|.+.... ....++..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 34556666778899999999999999999995 568899999986543 2345788899999998 79999999998853
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
... .......+++|||+++|+|.+++... ....+++..++.++.|++.|++|||+ .+|+||||||+||++++++
T Consensus 85 ~~~--~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 85 KSP--PGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENA 158 (282)
T ss_pred ccc--cCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCC
Confidence 211 12346789999999999999999752 23457888899999999999999998 6999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC----------c------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNT----------L------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~----------~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++|+|||++........ + ... +.++|||||||++|||++|.
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 999999999865421110 0 112 67899999999999999984
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=242.51 Aligned_cols=170 Identities=19% Similarity=0.333 Sum_probs=144.9
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
...||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|||++++++++. .+...++||
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------~~~~~~iv~ 97 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL--------VGEELWVLM 97 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee--------eCCeEEEEE
Confidence 45799999999999984 468999999997655455677899999999999999999999875 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++++|.+++.. ..+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++......
T Consensus 98 e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~ 170 (297)
T cd06659 98 EFLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 170 (297)
T ss_pred ecCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccc
Confidence 99999999998743 458899999999999999999998 69999999999999999999999999998644221
Q ss_pred CC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 615 NT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 615 ~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.. + +.. +.++|||||||+++||++|.
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~ 214 (297)
T cd06659 171 VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214 (297)
T ss_pred cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 10 0 233 88999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-27 Score=237.78 Aligned_cols=174 Identities=21% Similarity=0.337 Sum_probs=149.1
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|+..+.||.|+||.||+|+. .+++.||+|.+.... ....+.+.+|+++++.++|+|++++++++. ++..
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 73 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL--------KGSK 73 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE--------ECCe
Confidence 577789999999999999995 468899999987543 233467889999999999999999999875 3356
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++|+||+++++|.++++. ..+++..+..++.|++.|+.|||+ .+++||||+|+||++++++.++|+|||+++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 146 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSG 146 (274)
T ss_pred EEEEEEeeCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccce
Confidence 8999999999999999964 268999999999999999999998 799999999999999999999999999987
Q ss_pred cccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . +.. +.++|||||||++|||+||.
T Consensus 147 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~ 195 (274)
T cd06609 147 QLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195 (274)
T ss_pred eecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 6543210 0 233 88999999999999999984
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-27 Score=234.38 Aligned_cols=177 Identities=17% Similarity=0.262 Sum_probs=149.1
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+++ ..+++.||+|.+.... ....+++.+|++++++++||||+++++++. ...
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE--------ENG 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec--------CCC
Confidence 47788999999999999998 4568899999987532 223467899999999999999999999874 445
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++++|.+++... ....+++.+++.++.|++.|++|||+ .+++|+||+|+||+++.++.++|+|||++
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 73 NLYIVMDYCEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred eEEEEEecCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 789999999999999999752 23457899999999999999999998 69999999999999999999999999999
Q ss_pred ccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . +.. +.++|||||||+++||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCC
Confidence 76533210 0 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=233.17 Aligned_cols=172 Identities=25% Similarity=0.440 Sum_probs=146.3
Q ss_pred CccccCCccceEEEEeCC----CcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|.... +..||+|.++..... ..+.+.+|++.++.++|+|++++++++. .....+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~~~~ 72 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT--------EEEPLY 72 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec--------CCCceE
Confidence 469999999999999543 788999999765433 2578999999999999999999999885 345689
Q ss_pred EEEEccCCCCHhHHhhccCC------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 532 LVLEHISNGSLRDYLTDWKK------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+||
T Consensus 73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~df 149 (262)
T cd00192 73 LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDF 149 (262)
T ss_pred EEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccc
Confidence 99999999999999975311 3678999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCC------C------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRN------T------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~------~------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|.+....... . . ... +.++||||+|++++||+++
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~ 203 (262)
T cd00192 150 GLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTL 203 (262)
T ss_pred ccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhc
Confidence 9998764421 0 0 223 8899999999999999984
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=252.15 Aligned_cols=171 Identities=19% Similarity=0.307 Sum_probs=143.3
Q ss_pred hcCCCCCCccccCCccceEEEEeC---CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..+|.+.+.||+|+||.||++... .+..||+|.+... +...+|++++++++||||+++++++. .
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~--------~ 157 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYR--------W 157 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEe--------e
Confidence 457999999999999999999743 3578999988632 34568999999999999999998774 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+. ++|.+++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 158 ~~~~~lv~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 158 KSTVCMVMPKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred CCEEEEEehhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCc
Confidence 456899999996 68999884 34568999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCC----------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . ... +.++|||||||++|||++|.
T Consensus 231 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~ 284 (392)
T PHA03207 231 AACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKN 284 (392)
T ss_pred cccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCC
Confidence 9865432211 0 223 78999999999999999984
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=239.81 Aligned_cols=177 Identities=17% Similarity=0.253 Sum_probs=150.1
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.-|+..+.||+|.|..|-.|+ .-+|+.||||++.+.+. .....+.+|++.|+-++|||||++|.+.- ++
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD--------TQ 89 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID--------TQ 89 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc--------cc
Confidence 347778899999999999998 45799999999986543 23467889999999999999999998762 56
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYN 606 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DfG 606 (640)
..+|+|+|.-.+|+|+||+-+ ....+.+....+++.||+.|+.|+|+ ..+|||||||+||.+-+. |-+|+.|||
T Consensus 90 TKlyLiLELGD~GDl~DyImK--He~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMK--HEEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred ceEEEEEEecCCchHHHHHHh--hhccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeecc
Confidence 679999999999999999975 34568899999999999999999999 799999999999987554 899999999
Q ss_pred CCccccCCCCc----------------cC--CCCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SF--HTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~--~~~~~DvwS~Gvvl~elltG~ 640 (640)
++-...+.... +. ..+++||||+||+||.|++|.
T Consensus 165 FSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq 216 (864)
T KOG4717|consen 165 FSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQ 216 (864)
T ss_pred ccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCC
Confidence 99766543321 32 389999999999999999984
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-27 Score=234.18 Aligned_cols=178 Identities=20% Similarity=0.284 Sum_probs=147.6
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|++|.||+++. .+++.||+|.+..... ...+.+.+|++++++++|||++++++.+. ....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~ 73 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE-------GEDG 73 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec-------CCCC
Confidence 477889999999999999994 4578999999975432 23457889999999999999999988653 1234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++++|.+++... ....+++.+++.++.+++.|++|||+ .+++||||||+||+++.++.++|+|||++
T Consensus 74 ~~~lv~e~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 74 LLYIVMGFCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEEEEecccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccce
Confidence 579999999999999999752 24468999999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . +.. +.++|||||||+++||++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~ 199 (257)
T cd08223 150 RVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK 199 (257)
T ss_pred EEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCC
Confidence 75532110 0 233 78899999999999999983
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-27 Score=239.75 Aligned_cols=176 Identities=21% Similarity=0.380 Sum_probs=146.9
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++++++||||+++++++. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--------TEN 72 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc--------cCC
Confidence 477889999999999999985 468899999987543 223467889999999999999999999874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||++ ++|.+++... ....+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 73 KLYLVFEFLH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred cEEEEeeccc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccch
Confidence 6899999996 6899998652 34568999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... . + .. +.++|||||||++|||+||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~ 198 (284)
T cd07860 148 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 198 (284)
T ss_pred hhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 65432110 0 1 22 67899999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=241.05 Aligned_cols=175 Identities=18% Similarity=0.330 Sum_probs=145.4
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++||||+++++++. +..
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~--------~~~ 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH--------SDK 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc--------cCC
Confidence 367788999999999999995 468999999987532 223356788999999999999999998874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++|+||++ ++|.+++.. ....+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 73 KLTLVFEYCD-QDLKKYFDS--CNGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred ceEEEEecCC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchh
Confidence 6899999997 588888764 23468999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... . + .. +.++|||||||++|||+||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~ 197 (284)
T cd07839 147 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197 (284)
T ss_pred hccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcC
Confidence 75432110 0 2 22 78899999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=232.35 Aligned_cols=169 Identities=22% Similarity=0.417 Sum_probs=143.3
Q ss_pred CccccCCccceEEEEeCCCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEE
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~E 535 (640)
+.||+|+||.||++...+++.||+|.+...... ..+.+.+|++++++++||||+++++++. .....++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV--------QKQPIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe--------cCCCeEEEEE
Confidence 469999999999999766999999998754332 3467899999999999999999999875 3456899999
Q ss_pred ccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCC
Q 006570 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN 615 (640)
Q Consensus 536 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~ 615 (640)
|+++++|.++++. ....+++..++.++.+++.|++|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 73 ~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 73 LVPGGSLLTFLRK--KKNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI 147 (251)
T ss_pred cCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCc
Confidence 9999999999964 23457899999999999999999998 699999999999999999999999999987543100
Q ss_pred -------------Cc------cCC-CCccceehhhHHHHHHhh
Q 006570 616 -------------TL------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 616 -------------~~------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
.. +.. +.++|||||||++|||+|
T Consensus 148 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 148 YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190 (251)
T ss_pred ceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence 00 233 889999999999999998
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=228.37 Aligned_cols=178 Identities=20% Similarity=0.389 Sum_probs=151.4
Q ss_pred HHHHHHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 443 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
++|+-..+ .+.||+|+|+.|--+. +.+|.++|||++.+.....+.+..+|++++... .|+||++++.++.
T Consensus 75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE--- 146 (463)
T KOG0607|consen 75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFE--- 146 (463)
T ss_pred HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhc---
Confidence 56666655 4789999999999998 788999999999988777788999999999999 5999999998873
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--- 597 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--- 597 (640)
++...|+|||-|.||+|...+++ ...+++.++.++..+|+.||.|||. .+|.|||+||+|||-.+-
T Consensus 147 -----dd~~FYLVfEKm~GGplLshI~~---~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 147 -----DDTRFYLVFEKMRGGPLLSHIQK---RKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKV 215 (463)
T ss_pred -----ccceEEEEEecccCchHHHHHHH---hhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCc
Confidence 55679999999999999999975 5668999999999999999999999 799999999999998554
Q ss_pred CceEEeCCCCCccccCCCC-----c------------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 598 LTAKLSGYNIPLPSKVRNT-----L------------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~-----~------------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
.-+||+||.++.-+..... . ... ++++|.||+|||||-|+.|
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsG 287 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSG 287 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhC
Confidence 4579999988764422110 0 222 8999999999999999988
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=240.57 Aligned_cols=173 Identities=19% Similarity=0.329 Sum_probs=145.5
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++. .+...
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 77 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL--------KGTKL 77 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc--------cCCce
Confidence 44567899999999999985 457899999987443 223467899999999999999999999875 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++.. ..+++..+..++.|+++|++|||+ .+++|+||+|+||++++++.+|++|||++..
T Consensus 78 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred EEEEEccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEcccccccc
Confidence 999999999999999853 458899999999999999999998 6999999999999999999999999999876
Q ss_pred ccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... . +.. +.++|||||||+++||+||.
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~ 198 (277)
T cd06642 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198 (277)
T ss_pred ccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCC
Confidence 432210 0 223 78999999999999999983
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-27 Score=245.00 Aligned_cols=177 Identities=19% Similarity=0.374 Sum_probs=145.3
Q ss_pred cCCCCCCccccCCccceEEEEeC--------CCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
.+|++.+.||+|+||.||+|+.. .+..||+|.++.... ...+++.+|+++++++ +||||++++++|.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT--- 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc---
Confidence 45788999999999999999732 123699998874322 2346789999999999 8999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 587 (640)
.+...+++|||+++|+|.+++.... ....+++.+++.++.|++.||+|||+ .+++||||
T Consensus 89 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dl 160 (334)
T cd05100 89 -----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDL 160 (334)
T ss_pred -----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeecccc
Confidence 3345899999999999999997522 12458899999999999999999998 79999999
Q ss_pred CCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 588 KTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 588 k~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||++
T Consensus 161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 231 (334)
T cd05100 161 AARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231 (334)
T ss_pred ccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHh
Confidence 99999999999999999999875432110 0 223 788999999999999998
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=234.33 Aligned_cols=178 Identities=21% Similarity=0.288 Sum_probs=147.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-----CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||.||+|+. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 4688899999999999999984 568999999875321 12235788999999999999999999987521
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.+...+++|||+++++|.+++.. ...+++...+.++.|++.||.|||+ .+++||||||+||+++.++.++|+|
T Consensus 77 -~~~~~~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 77 -EEKKLSIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred -CCCEEEEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECc
Confidence 23457899999999999999864 3457899999999999999999998 6999999999999999999999999
Q ss_pred CCCCccccCC-----------CC--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVR-----------NT--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~-----------~~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++..... .. . +.. +.++|||||||+++||++|.
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 206 (264)
T cd06653 150 FGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEK 206 (264)
T ss_pred cccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 9999754210 00 0 223 78899999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=241.22 Aligned_cols=176 Identities=20% Similarity=0.329 Sum_probs=147.4
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++. .+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 72 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR--------RK 72 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc--------cC
Confidence 36778899999999999999965 588999999864322 23467889999999999999999999874 44
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++++|.++... ...+++..++.++.|+++||+|||+ .+++||||+|+||++++++.+||+|||+
T Consensus 73 ~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 73 KRLYLVFEFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred CeEEEEEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeee
Confidence 568999999999999887753 3458999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+......... + .. +.++|||||||+++||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~ 198 (286)
T cd07846 147 ARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGE 198 (286)
T ss_pred eeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCC
Confidence 8754221110 1 22 67899999999999999983
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.5e-27 Score=240.38 Aligned_cols=176 Identities=17% Similarity=0.278 Sum_probs=147.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+++. .+++.||+|.+..... ...+.+.+|+++++.++||||+++++.+. .
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~ 72 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--------T 72 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe--------c
Confidence 3688889999999999999995 4578999999875432 23457889999999999999999998874 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++|+|.+++.. ...+++..+..++.+++.||+|||+ .+++||||||+||+++.++.+|++|||
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 73 KRHLCMVMEYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred CCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCC
Confidence 4568999999999999999964 3468999999999999999999998 699999999999999999999999999
Q ss_pred CCccccC--------------------------CCCc------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKV--------------------------RNTL------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~--------------------------~~~~------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++.... .... ... +.++|||||||++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~ 213 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGC 213 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9863100 0000 223 88999999999999999984
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=233.04 Aligned_cols=174 Identities=18% Similarity=0.380 Sum_probs=146.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.+|+..+.||+|+||.||+|...++..+|+|.+.... ....++.+|++++++++|||++++++++. .....
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~ 74 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT--------ERSPI 74 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEc--------cCCce
Confidence 3567789999999999999997678899999887432 34568999999999999999999999874 34468
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.++++. ....+++..++.++.+++.|++|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 75 ~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 149 (256)
T cd05112 75 CLVFEFMEHGCLSDYLRA--QRGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRF 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceee
Confidence 999999999999999974 23457899999999999999999998 6999999999999999999999999999875
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
...... . +.. +.++||||||+++|||++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~ 196 (256)
T cd05112 150 VLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFS 196 (256)
T ss_pred cccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHc
Confidence 422100 0 233 778999999999999998
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=236.76 Aligned_cols=179 Identities=14% Similarity=0.232 Sum_probs=143.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHH-HhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVEL-LSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||.||+++. .+|+.||+|+++.... ....++..|++. ++..+||||+++++++. ..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~--------~~ 72 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF--------RE 72 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe--------cC
Confidence 3678889999999999999995 4689999999875422 223456666665 56678999999999885 33
Q ss_pred CeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
...++||||++ |+|.+++... .....+++..++.++.|++.||+|||++ .+++||||||+||++++++.+||+|||
T Consensus 73 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 73 GDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred CcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 45899999996 6898888642 2345689999999999999999999983 389999999999999999999999999
Q ss_pred CCccccCCC-------C--c----------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRN-------T--L----------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~-------~--~----------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++....... . + . .. +.++|||||||++|||++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (283)
T cd06617 150 ISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGR 204 (283)
T ss_pred cccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCC
Confidence 987542211 0 0 1 22 78899999999999999984
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=235.05 Aligned_cols=175 Identities=18% Similarity=0.332 Sum_probs=147.0
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
+|+..+.||+|+||.||+|+ ..+++.||+|.+..... ...+.+.+|++++++++|+||+++++++.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC------- 73 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-------
Confidence 47788999999999999998 46789999999874321 12367899999999999999999999874
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEe
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLS 603 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~ 603 (640)
.++..++||||+++++|.+++.+ ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++ .+||+
T Consensus 74 -~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 74 -EDSHFNLFVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred -cCCeEEEEEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEc
Confidence 34568999999999999999964 3468899999999999999999998 6999999999999998775 69999
Q ss_pred CCCCCccccCCCC--------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT--------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~--------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||++........ . +.. +.++||||+|++++||++|.
T Consensus 147 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~ 205 (268)
T cd06630 147 DFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK 205 (268)
T ss_pred ccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCC
Confidence 9999866532110 0 223 78899999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=236.15 Aligned_cols=174 Identities=18% Similarity=0.318 Sum_probs=147.3
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++. .+..
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~ 76 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL--------KGTK 76 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------ECCE
Confidence 466678899999999999985 458899999987543 223467889999999999999999999885 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++.. ..+++.+...++.|++.|++|||+ .+++|+||+|+||+++.++.++++|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~ 149 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEEEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccce
Confidence 8999999999999999853 358899999999999999999998 699999999999999999999999999996
Q ss_pred cccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . +.. +.++|||||||++|||+||.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~ 198 (277)
T cd06640 150 QLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198 (277)
T ss_pred eccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCC
Confidence 5432110 0 223 88999999999999999984
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=231.80 Aligned_cols=175 Identities=23% Similarity=0.326 Sum_probs=147.5
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-----CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
+|+..+.||+|+||.||+|... +++.|++|.+..... ...+.+.+|++++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------- 72 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-------- 72 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe--------
Confidence 3667789999999999999965 789999999865431 23467899999999999999999999875
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...+++|||+++++|.++++. ...+++..+..++.|++.|++|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 73 EEDNLYIFLELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred cCCeEEEEEEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccC
Confidence 34568999999999999999964 3458899999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCC-------C--c--------cC-CCCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRN-------T--L--------SF-HTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~-------~--~--------~~-~~~~~DvwS~Gvvl~elltG~ 640 (640)
|++....... . . .. .+.++|+|||||++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~ 199 (258)
T cd06632 147 GMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199 (258)
T ss_pred ccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 9987543221 0 0 22 277899999999999999983
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=237.64 Aligned_cols=180 Identities=18% Similarity=0.243 Sum_probs=149.4
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|...+.||.|++|.||++.. .+++.+|+|.+..... ...+++.+|++++++++||||+++++++... ....
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~ 75 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE------SSSS 75 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc------CCCe
Confidence 567788999999999999996 4588999999875432 2346789999999999999999999988531 3346
Q ss_pred EEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
.++||||+++|+|.+++.... ....+++.....++.|++.||+|||+ .+++|+||+|+||++++++.++|+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccc
Confidence 899999999999999876422 34568899999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC--------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT--------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~--------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . +.. +.++||||+||++|||++|+
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~ 200 (287)
T cd06621 153 GELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200 (287)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 65422110 0 233 78999999999999999995
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=232.73 Aligned_cols=179 Identities=18% Similarity=0.349 Sum_probs=150.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||.|+||+||+|.. .++..+|+|++.... ....+.+.+|++.++.++|+|++++++.+. .+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV--------VGD 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe--------eCC
Confidence 4688899999999999999994 468899999987533 224578999999999999999999998875 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++++|.++++.......+++.....++.|++.|++|||+ .+++||||||+||++++++.+||+|||++
T Consensus 73 ~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 73 ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 689999999999999999753333568999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCC------------C--c-------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN------------T--L-------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~------------~--~-------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . . .. . +.++|||||||+++||++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~ 204 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGA 204 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCC
Confidence 6543210 0 0 22 3 88899999999999999984
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=234.91 Aligned_cols=174 Identities=20% Similarity=0.369 Sum_probs=147.4
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCC---CcccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLR---HRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~~~~ 526 (640)
.|+..+.||+|+||.||+|.. .+++.||+|.++... ....+++.+|++++++++ |||++++++++. .
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~--------~ 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL--------K 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee--------e
Confidence 467788999999999999995 568999999987542 234467889999999996 999999999875 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++++|.++++. ..+++...+.++.+++.||.|||+ .+|+||||+|+||++++++.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 74 GPRLWIIMEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred CCEEEEEEecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCC
Confidence 4568999999999999999863 368999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCC----------c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ . +.. +.++|||||||++|||++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~ 199 (277)
T cd06917 147 VAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN 199 (277)
T ss_pred ceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCC
Confidence 9876532211 0 223 78999999999999999985
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=233.31 Aligned_cols=181 Identities=15% Similarity=0.286 Sum_probs=143.4
Q ss_pred CCCCCccccCCccceEEEEeC----CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
|...+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...... ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAK--GR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCC--Cc
Confidence 556788999999999999853 36789999987542 22345788999999999999999999988532110 01
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC---CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
....++++||+++|+|.+++.... ....+++...+.++.|++.|++|||+ .+|+||||||+||+++.++.+|++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEEC
Confidence 123578999999999998875321 22357899999999999999999998 699999999999999999999999
Q ss_pred CCCCCccccCCCC----------c---------cCC-CCccceehhhHHHHHHhh
Q 006570 604 GYNIPLPSKVRNT----------L---------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 604 DfGla~~~~~~~~----------~---------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
|||+++....... . ... +.++|||||||++|||++
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~ 210 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT 210 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhh
Confidence 9999876532110 0 222 778999999999999998
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=234.01 Aligned_cols=175 Identities=22% Similarity=0.339 Sum_probs=145.5
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---C-------ChHHHHHHHHHHhcCCCcccceeeeEEEecc
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---H-------LPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 520 (640)
+|...+.||+|+||.||+|.. .+++.||+|.++.... . ..+.+.+|+++++.++|||++++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 466788999999999999984 4689999998864211 1 1246788999999999999999999874
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCce
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTA 600 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 600 (640)
.....++||||+++|+|.++++. ...+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+
T Consensus 79 -----~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 79 -----TEEYLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGIC 147 (272)
T ss_pred -----cCCceEEEEecCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeE
Confidence 34568999999999999999975 3568999999999999999999998 699999999999999999999
Q ss_pred EEeCCCCCccccCCC----------C--c--------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRN----------T--L--------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~----------~--~--------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++|||+++...... . . .. . +.++||||||++++|+++|.
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 209 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCC
Confidence 999999987543210 0 0 11 2 77899999999999999983
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=236.54 Aligned_cols=174 Identities=21% Similarity=0.327 Sum_probs=148.7
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|++.+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+.++++++|||++++++++. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~ 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP--------HGS 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe--------cCC
Confidence 477789999999999999995 468999999997543 233568999999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+ +++|.+++... ...+++.+++.++.|+++||+|||+ .+++|+||||+||++++++.++|+|||++
T Consensus 73 ~~~~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 73 GFVLVMEYM-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred eeEEEeccc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 689999999 99999998742 3568999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCC-----------c--------cCC-CCccceehhhHHHHHHhhc
Q 006570 609 LPSKVRNT-----------L--------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 609 ~~~~~~~~-----------~--------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
........ . ... +.++||||+|++++||+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg 197 (286)
T cd07832 147 RLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG 197 (286)
T ss_pred ccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcC
Confidence 76543220 0 123 7899999999999999998
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=237.81 Aligned_cols=175 Identities=19% Similarity=0.371 Sum_probs=148.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|...+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++++++|||++++++++. ..+.
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------~~~~ 90 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL--------VGDE 90 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee--------eCCc
Confidence 5678889999999999999984 568899999987554445577899999999999999999999885 3345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.|+|+||+++|+|.+++.+ ..+++.++..++.+++.|++|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 91 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred EEEEEecCCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 8999999999999999863 347899999999999999999998 799999999999999999999999999876
Q ss_pred cccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . ... +.++|||||||++||+++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~ 212 (293)
T cd06647 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212 (293)
T ss_pred cccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 4422110 0 223 78999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=233.18 Aligned_cols=183 Identities=19% Similarity=0.290 Sum_probs=150.2
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||.|+||.||++.. .+++.||+|.++.... ...+++..|++++++++||||+++++++.. ..+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID------RSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec------CCCC
Confidence 477789999999999999984 5688999999875322 234568889999999999999999987752 1345
Q ss_pred eEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCC--CCCeeccCCCCCceeecCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGV--APGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
..+++|||+++++|.+++... .....+++..++.++.+++.||+|||..+ ..+++|+||||+||++++++.+||+||
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecc
Confidence 689999999999999999753 22457899999999999999999999221 279999999999999999999999999
Q ss_pred CCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++........ . ... +.++||||||++++||++|+
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~ 207 (265)
T cd08217 155 GLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS 207 (265)
T ss_pred cccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCC
Confidence 99987543221 0 223 77899999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=235.96 Aligned_cols=177 Identities=21% Similarity=0.370 Sum_probs=147.9
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|+..+.||+|++|.||+|+. .+|+.||||.++.... ...+.+.+|++++++++||||+++++++. ..+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~ 72 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH--------TENK 72 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe--------eCCc
Confidence 477889999999999999995 4688999999976432 23467788999999999999999999885 3345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++ +|.+++........+++..+..++.|++.||+|||+ .+++||||||+||++++++.+|++|||++.
T Consensus 73 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 73 LMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 8999999985 899988754434568999999999999999999998 799999999999999999999999999986
Q ss_pred cccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... + . + .. +.++|||||||++|||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 198 (284)
T cd07836 149 AFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198 (284)
T ss_pred hhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 532110 0 0 2 22 77899999999999999984
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=262.94 Aligned_cols=183 Identities=16% Similarity=0.203 Sum_probs=154.8
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
.++....++|.+.+.||+|+||.|..+++ .+++.||+|++.+. ......-|+.|.++|..-+.+-|+.++-.+
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF--- 144 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF--- 144 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh---
Confidence 45555667899999999999999999996 46889999999762 334456799999999999999999987433
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
++..++|+|||||+||+|-.++.+ ..++++..+..|+..|+-||.-+|+ .|+|||||||.|||+|..|+
T Consensus 145 -----QD~~~LYlVMdY~pGGDlltLlSk---~~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 145 -----QDERYLYLVMDYMPGGDLLTLLSK---FDRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred -----cCccceEEEEecccCchHHHHHhh---cCCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCc
Confidence 356789999999999999999965 3368999999999999999999999 89999999999999999999
Q ss_pred eEEeCCCCCccccCCCCc----------------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||.+-.....+.. + +. ++.+|.||+||++|||+.|.
T Consensus 214 ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~ 278 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGE 278 (1317)
T ss_pred EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCC
Confidence 999999998655432211 2 34 99999999999999999983
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=233.65 Aligned_cols=175 Identities=18% Similarity=0.252 Sum_probs=149.4
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+|+..+.||.|+||.||+|+.. +++.||+|.+..... ...+.+.+|++++++++||||+++++++. ++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 72 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ--------DE 72 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc--------CC
Confidence 4777899999999999999964 588999999975432 33578899999999999999999998763 45
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++++|.+++.. ...+++..+..++.|+++||.|||+ .+++|+||||+||++++++.++|+|||+
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 73 ENMYLVVDLLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred CeEEEEEeCCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 678999999999999999964 3568999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+......... ... +.++||||||+++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~ 196 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK 196 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCC
Confidence 8765332110 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=239.27 Aligned_cols=178 Identities=21% Similarity=0.295 Sum_probs=149.3
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.++||||+++++.+. .
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~ 72 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--------T 72 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee--------c
Confidence 36788899999999999999954 5899999999754322 3457889999999999999999998874 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+++++|.+++.. .....+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 73 ETYLCLVMDYCPGGELFRLLQR-QPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred CCEEEEEEEecCCCCHHHHHHh-CCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecc
Confidence 4568999999999999999874 234568999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCC----------------------------------------Cc------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRN----------------------------------------TL------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~----------------------------------------~~------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++....... .. +.. +.++||||||+++|||++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 986542110 00 223 7789999999999999998
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 229 ~ 229 (316)
T cd05574 229 T 229 (316)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=233.82 Aligned_cols=169 Identities=17% Similarity=0.219 Sum_probs=134.6
Q ss_pred ccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHh---cCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 458 LIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLS---KLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~---~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.||+|+||.||+++. .+++.+|+|.+..... .....+.+|..+++ ..+|||++.+++++. .++..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~ 72 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH--------TPDKL 72 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe--------cCCeE
Confidence 489999999999995 4688999999865322 11223444444333 347999999988775 33468
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 73 ~lv~e~~~~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 73 CFILDLMNGGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 999999999999999864 3468999999999999999999998 6999999999999999999999999999864
Q ss_pred ccCCCC------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNT------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... . +.. +.++|||||||+++||++|.
T Consensus 147 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 193 (279)
T cd05633 147 FSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGH 193 (279)
T ss_pred ccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 321110 0 123 78899999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-28 Score=226.50 Aligned_cols=177 Identities=18% Similarity=0.312 Sum_probs=147.4
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|++.+.||+|.|+.||++. .++|+.+|+|++... ...+.+++.+|+++.+.++|||||++.... ++
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti--------~~ 81 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI--------QE 81 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh--------cc
Confidence 4567778899999999999998 567999999998653 344678999999999999999999998755 34
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~ 603 (640)
....|+|+|+|.||+|..-+.. +...++..+-.+..||++||.|+|. .+|||||+||+|+|+-.. --+|++
T Consensus 82 ~~~~ylvFe~m~G~dl~~eIV~---R~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 82 ESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred cceeEEEEecccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeec
Confidence 5678999999999999766653 2457788888999999999999999 599999999999999543 468999
Q ss_pred CCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+|.......-. ... +..+|||+.||+||-|+.||
T Consensus 156 ~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~ 209 (355)
T KOG0033|consen 156 DFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 209 (355)
T ss_pred ccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCC
Confidence 99999877632111 223 89999999999999999997
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=236.93 Aligned_cols=176 Identities=24% Similarity=0.310 Sum_probs=145.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..|+..+.||+|+||.||+|+. .+++.||+|.+...... ..+++.+|+++++.++||||++++++|. .
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~--------~ 86 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL--------R 86 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE--------e
Confidence 4577889999999999999985 46889999998643322 2356889999999999999999999986 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||++ |++.+++.. ....+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||
T Consensus 87 ~~~~~lv~e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 87 EHTAWLVMEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred CCeEEEEHHhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecC
Confidence 345899999997 588887753 23468999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... ... +.++||||||+++|||+||.
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~ 211 (307)
T cd06607 161 SASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211 (307)
T ss_pred cceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCC
Confidence 98755322110 123 77999999999999999983
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=230.29 Aligned_cols=177 Identities=18% Similarity=0.315 Sum_probs=147.2
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||++.. .+++.+|+|.+.... ....+.+.+|++++++++|||++++++.+. .+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~ 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL--------EDK 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe--------cCC
Confidence 477789999999999999984 468899999987542 223467889999999999999999998764 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DfGl 607 (640)
..++||||+++++|.+++... ....+++..++.++.++++|++|||+ .+++||||||+||+++++ ..+||+|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 73 ALMIVMEYAPGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEEEEecCCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 689999999999999999752 23458999999999999999999998 699999999999999865 5689999999
Q ss_pred CccccCCCC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . ... +.++||||||++++||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~ 198 (256)
T cd08220 149 SKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLK 198 (256)
T ss_pred ceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCC
Confidence 876532211 0 233 78999999999999999973
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-27 Score=237.03 Aligned_cols=174 Identities=25% Similarity=0.405 Sum_probs=144.5
Q ss_pred CCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCCh--HHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|+..+.||+|+||+||+++.. +++.||+|++........ ....+|+.++++++||||+++++++.. ...
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------~~~ 72 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--------DNY 72 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--------SSE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--------ccc
Confidence 445688999999999999954 567899999986543221 234569999999999999999998863 456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||++++++.++|+|||.+.
T Consensus 73 ~~~v~~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 73 LYIVMEYCPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEEEETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccccc---ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 8999999999999999972 4568999999999999999999999 699999999999999999999999999986
Q ss_pred cccC--C------CCc--------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKV--R------NTL--------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~--~------~~~--------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.... . .+. . .. +.++||||+|++++||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 196 (260)
T PF00069_consen 147 KLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGK 196 (260)
T ss_dssp ESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4211 0 000 2 33 99999999999999999984
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=233.31 Aligned_cols=170 Identities=19% Similarity=0.221 Sum_probs=141.6
Q ss_pred cccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 459 ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
||+|+||+||++.. .+|+.||+|.+.... ....+.+.+|++++++++||||+++++++. ..+..++||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~~lv~ 72 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE--------TKDDLCLVM 72 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe--------cCCeEEEEE
Confidence 68999999999984 468899999986432 223456778999999999999999998874 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++++|.+++.... ...+++..+..++.|++.|+.|||+ .+++||||+|+||++++++.+||+|||++......
T Consensus 73 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 73 TLMNGGDLKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred ecCCCCcHHHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 9999999999997532 2468999999999999999999998 69999999999999999999999999998754321
Q ss_pred CC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 615 NT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 615 ~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.. . +.. +.++|||||||+++||++|.
T Consensus 149 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~ 191 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191 (277)
T ss_pred CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCC
Confidence 10 0 233 77899999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=247.07 Aligned_cols=174 Identities=18% Similarity=0.335 Sum_probs=144.4
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecc----cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK----QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
...||+|+|-+||||.. .+|.+||--.++.. .+...++|..|+++|+.++|||||+++.++.+. ....+
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~------~n~~i 118 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT------DNKTI 118 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC------CCcee
Confidence 46799999999999984 35777774433321 233448899999999999999999999988642 23568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DfGla~ 609 (640)
-+|+|.|..|+|+.|.++ .+.++....+.+++||++||.|||++ .|+|||||||-.||+|+.+ |.+||+|+|+|.
T Consensus 119 n~iTEL~TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt 194 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT 194 (632)
T ss_pred eeeeecccCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHH
Confidence 899999999999999975 44578889999999999999999985 5899999999999999876 999999999998
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhhc
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
........ .-. ++.+||||||+.|+||+||
T Consensus 195 l~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~ 239 (632)
T KOG0584|consen 195 LLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTS 239 (632)
T ss_pred HhhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhc
Confidence 76544322 223 8999999999999999997
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=234.73 Aligned_cols=175 Identities=18% Similarity=0.254 Sum_probs=145.6
Q ss_pred CCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
+|+..+.||+|+||.||+++. .+|..||+|+++... ....+.+.+|++++.++ +|+||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence 467789999999999999985 368899999997532 22346788999999999 5999999987763
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
.+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||
T Consensus 76 ---~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 76 ---TDTKLHLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred ---cCCeEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEE
Confidence 34568999999999999999964 3458899999999999999999998 79999999999999999999999
Q ss_pred eCCCCCccccCCCC-----------c-------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT-----------L-------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~-----------~-------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||++........ . . .. +.++||||||+++|||+||.
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~ 205 (290)
T cd05613 147 TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGA 205 (290)
T ss_pred eeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCC
Confidence 99999876532110 0 1 12 67899999999999999984
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=230.39 Aligned_cols=175 Identities=21% Similarity=0.374 Sum_probs=148.8
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+|.. .+++.||+|.++..... ..+.+.+|++++++++|+||+++++++. ...
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~ 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV--------HRE 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe--------cCC
Confidence 477789999999999999985 46889999999765432 4578899999999999999999999874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++|+||+++++|.+++.. ...+++..++.++.+++.|++|||+ .+++|+||+|+||++++++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 73 KVYIFMEYCSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEEEEecCCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 68999999999999999964 3457899999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCC--------------c--------c--C-CCCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT--------------L--------S--F-HTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~--------------~--------~--~-~~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . . . .+.++||||||++++|+++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~ 203 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGK 203 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCC
Confidence 76432110 0 1 1 277899999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=235.65 Aligned_cols=183 Identities=20% Similarity=0.334 Sum_probs=147.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+++.||+|.++... ....+.+.+|++++++++ ||||+++++++..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~---~~ 77 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK---NG 77 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC---CC
Confidence 3688889999999999999995 468999999886542 223467889999999995 6999999998753211 12
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCC--CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~ 603 (640)
....|+||||+++ +|.+++..... ...+++..++.++.|+++||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 78 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~ 153 (295)
T cd07837 78 KPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIA 153 (295)
T ss_pred CceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEe
Confidence 3347999999985 89998865322 3468999999999999999999998 79999999999999999 8999999
Q ss_pred CCCCCccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... . + .. +.++||||||+++|||++|+
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 209 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQ 209 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCC
Confidence 9999875422100 0 2 23 78999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=235.98 Aligned_cols=178 Identities=19% Similarity=0.328 Sum_probs=147.5
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|+.. +++.+|+|.++.... .....+.+|++++++++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------~~ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS------NL 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec------CC
Confidence 46788899999999999999964 588999999975432 2234677899999999999999999988631 22
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ ++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+
T Consensus 79 ~~~~lv~e~~~-~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 79 DKIYMVMEYVE-HDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred CcEEEEehhcC-cCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCc
Confidence 56899999997 4999988642 3368999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++....... . + .. +.++||||||++++||++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (293)
T cd07843 153 AREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204 (293)
T ss_pred eeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCC
Confidence 876543210 0 1 22 78899999999999999983
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-26 Score=231.13 Aligned_cols=186 Identities=23% Similarity=0.366 Sum_probs=153.0
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.+++|+..+.||+|+||.||+|+.. +++.+++|.+..... ..+++.+|+++++++ +|+||+++++++..... ...
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP--PGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC--CCc
Confidence 4578999999999999999999964 578999999875432 346799999999999 79999999999864321 123
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+...++||||+++++|.++++... ....+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCC
Confidence 566899999999999999986522 24578999999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCCC----------c------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------L------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++........ . ... +.++|||||||+++||+||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~ 215 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGK 215 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCC
Confidence 99865422110 0 112 67899999999999999984
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=214.65 Aligned_cols=176 Identities=15% Similarity=0.252 Sum_probs=141.7
Q ss_pred CCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc-CCChHHHHHHHHHHhc-CCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSK-LRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
......||+|+||.|=+-+ ..+|...|+|++...- .+..++..+|+++..+ ..+|.+|.++|..+ ....
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~--------regd 119 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF--------REGD 119 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh--------cccc
Confidence 3346789999999998888 4579999999997543 2334667788876555 47999999999775 2345
Q ss_pred EEEEEEccCCCCHhHHhhc-cCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTD-WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
+|+.||.|.- ||..+.++ .+....+++...=+||..+.+||.|||+. ..+||||+||+|||++.+|++|+||||++
T Consensus 120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccc
Confidence 8999999965 88877654 23567788999999999999999999996 79999999999999999999999999998
Q ss_pred ccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 609 LPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 609 ~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
....++... ... +-|+||||+|+.+.||.++
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~l 248 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAIL 248 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhc
Confidence 655332110 123 8899999999999999986
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=233.67 Aligned_cols=172 Identities=22% Similarity=0.420 Sum_probs=140.9
Q ss_pred CccccCCccceEEEEeCC-------CcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTD-------GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+.||+|+||.||+|+..+ +..+|+|.+.... .....++.+|+++++.++||||+++++++. ...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 72 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL--------LNE 72 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec--------CCC
Confidence 368999999999998542 2579999886432 234567899999999999999999999885 334
Q ss_pred eEEEEEEccCCCCHhHHhhccC----CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-----c
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK----KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-----T 599 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-----~ 599 (640)
..++||||+++|+|.++++... ....+++.+++.++.|++.||+|||+ .+++|+||||+||+++.+. .
T Consensus 73 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 73 PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcc
Confidence 5899999999999999997522 22457899999999999999999998 6999999999999999887 8
Q ss_pred eEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 600 AKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+|++|||+++....... + ... +.++|||||||++|||+| |
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g 210 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLG 210 (269)
T ss_pred eEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcC
Confidence 99999999875421100 0 234 889999999999999997 5
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=233.49 Aligned_cols=178 Identities=19% Similarity=0.377 Sum_probs=151.6
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++.|+..+.||+|+||.||+|... ++..|++|.+..... ..+.+.+|++++++++|+|++++++++. ..
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~ 87 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYL--------VG 87 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEE--------EC
Confidence 4566778899999999999999965 688999999986543 4578899999999999999999999886 23
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|+||+++++|.+++.... ..+++..+..++.+++.||+|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccch
Confidence 56899999999999999997522 378999999999999999999998 7999999999999999999999999998
Q ss_pred CccccCCC-----------Cc------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN-----------TL------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~-----------~~------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... .. +.. +.++|||||||++|||++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~ 213 (286)
T cd06614 163 AAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213 (286)
T ss_pred hhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCC
Confidence 76433210 00 233 88999999999999999983
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-26 Score=228.18 Aligned_cols=174 Identities=23% Similarity=0.432 Sum_probs=145.8
Q ss_pred CCCCCccccCCccceEEEEeCC-----CcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTD-----GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
|++.+.||+|+||.||+++..+ +..||+|.++..... ..+.+..|++.+..++|+||+++++++. .
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~ 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT--------E 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc--------C
Confidence 3457889999999999999643 378999999755432 4578999999999999999999999885 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....+++|||+++++|.+++.... ...+++.+++.++.|++.|++|||+ .+++||||||+||++++++.++|+|||
T Consensus 73 ~~~~~~i~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 73 EEPLMIVMEYMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred CCeeEEEEeccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccC
Confidence 356899999999999999997522 1228999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCC-----------Cc-------cCC-CCccceehhhHHHHHHhh
Q 006570 607 IPLPSKVRN-----------TL-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 607 la~~~~~~~-----------~~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
++....... .. ... +.++||||+|++++||++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~ 199 (258)
T smart00219 149 LSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFT 199 (258)
T ss_pred CceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHh
Confidence 997553220 00 233 889999999999999998
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=232.56 Aligned_cols=173 Identities=19% Similarity=0.337 Sum_probs=146.1
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++||||+++++++. .+...
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~~ 77 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL--------KDTKL 77 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE--------eCCeE
Confidence 66678999999999999984 468899999886432 223467889999999999999999999885 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++.. ..+++..+..++.+++.|+.|||+ .+++|+||||+||+++.++.++|+|||++..
T Consensus 78 ~lv~e~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06641 78 WIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQ 150 (277)
T ss_pred EEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeeccccee
Confidence 999999999999999853 358899999999999999999998 7999999999999999999999999999865
Q ss_pred ccCCC--------C---c------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRN--------T---L------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~--------~---~------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... . . +.. +.++|||||||+++||++|.
T Consensus 151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~ 198 (277)
T cd06641 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198 (277)
T ss_pred cccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 43211 0 0 233 77899999999999999983
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=235.97 Aligned_cols=184 Identities=16% Similarity=0.307 Sum_probs=148.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++++++||||++++++|...........
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 4688899999999999999995 468999999986432 2223456789999999999999999999864322111234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ +|.+++.. ....+++.+++.++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 567999999965 88888864 23468999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCC--------------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT--------------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~--------------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . + .. +.++||||||+++|||+||+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~ 221 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRS 221 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCC
Confidence 865421110 0 1 22 67899999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=236.49 Aligned_cols=179 Identities=23% Similarity=0.363 Sum_probs=147.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+|+.||+|.++.... .....+.+|++++++++|+|++++++++... .
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~ 79 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK------H 79 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC------C
Confidence 46788899999999999999995 4689999999875432 2234567899999999999999999987521 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++ +|.+++... ...+++.++..++.|+++||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 80 ~~~~~lv~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 80 LDSIFLVMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred CCeEEEEEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccc
Confidence 3457999999964 899988642 3568999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + + .. +.++||||+||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~ 206 (309)
T cd07845 154 LARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206 (309)
T ss_pred eeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCC
Confidence 9876532210 0 2 22 78999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-26 Score=232.39 Aligned_cols=173 Identities=20% Similarity=0.375 Sum_probs=146.3
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
|+..+.||+|++|.||++.. .+++.+++|+++.......+.+.+|+.+++.++||||+++++++. .+...+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~--------~~~~~~ 92 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL--------VGDELW 92 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE--------cCCeEE
Confidence 44457999999999999984 568899999987554444567889999999999999999999875 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+|+||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.++|+|||.+...
T Consensus 93 ~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 93 VVMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred EEEeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 99999999999999864 458899999999999999999998 69999999999999999999999999987643
Q ss_pred cCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... . +.. +.++|||||||+++||++|.
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~ 212 (285)
T cd06648 166 SKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE 212 (285)
T ss_pred ccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCC
Confidence 22110 0 223 88999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-26 Score=230.71 Aligned_cols=179 Identities=15% Similarity=0.301 Sum_probs=145.6
Q ss_pred CCCCCCccccCCccceEEEEeCC--CcEEEEEEeeccc----------CCChHHHHHHHHHHhc-CCCcccceeeeEEEe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCLKLKQ----------RHLPQSLMQHVELLSK-LRHRHLVSILGHCIL 518 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~ 518 (640)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47778999999999999999654 6789999886421 1122457778887765 79999999999885
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
.+...++||||+++++|.+++... .....+++..++.++.|++.||.|||+. .+++|+||||+||+++++
T Consensus 80 -------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 80 -------ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGED 150 (269)
T ss_pred -------cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCC
Confidence 345689999999999999988542 2345689999999999999999999963 589999999999999999
Q ss_pred CceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 LTAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||.+......... +.. +.++||||||+++|||++|.
T Consensus 151 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~ 210 (269)
T cd08528 151 DKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQ 210 (269)
T ss_pred CcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCC
Confidence 99999999999765432110 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-26 Score=228.94 Aligned_cols=177 Identities=19% Similarity=0.302 Sum_probs=150.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|++|.||+|+.. +++.|++|++..... ...+.+.+|++.+.+++|+|++++++++. ...
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY--------KEG 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc--------cCC
Confidence 36788899999999999999965 589999999876533 34578999999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++++|.+++.. ...+++..++.++.|+++|++|||+. .+++||||+|+||+++.++.++|+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 73 EISIVLEYMDGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred eEEEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 68999999999999999964 35689999999999999999999972 49999999999999999999999999998
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... ... +.++||||||+++|||+||.
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~ 197 (264)
T cd06623 148 KVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK 197 (264)
T ss_pred eecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 765321110 223 77899999999999999983
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-28 Score=229.75 Aligned_cols=174 Identities=17% Similarity=0.205 Sum_probs=138.8
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhc-CCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSK-LRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
...||.|+||+|+|-.+ +.|+..|||+++.... ..++++..|.+...+ -+.||||+++|.++ .+...|+
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F--------~EGdcWi 140 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF--------SEGDCWI 140 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh--------cCCceee
Confidence 46799999999999985 5699999999986433 455778888876544 47999999999986 2334799
Q ss_pred EEEccCCCCHhHHhhc--cCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 533 VLEHISNGSLRDYLTD--WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
.||.|.- ||+.+... ......+++.-.-.|...+++||.||..+ ..|||||+||+|||+|..|.+||||||++..
T Consensus 141 CMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 141 CMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHh
Confidence 9999964 77665432 12345688888888999999999999986 7999999999999999999999999999865
Q ss_pred ccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...+... ... +-++||||+||+|+|+.||.
T Consensus 218 Lv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~ 266 (361)
T KOG1006|consen 218 LVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGN 266 (361)
T ss_pred HHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCC
Confidence 4322110 122 78999999999999999994
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=240.57 Aligned_cols=190 Identities=17% Similarity=0.270 Sum_probs=153.9
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEE
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCI 517 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 517 (640)
....++....++|+..+.||+|+||.||+|. ..+++.||+|+++... ....+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 3456677788999999999999999999998 4578999999987432 223467888999999999999999999875
Q ss_pred ecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
... ........++++|++ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||+++++
T Consensus 87 ~~~--~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 87 PAR--SLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 156 (345)
T ss_pred ecc--cccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCC
Confidence 221 111234478888887 7799988753 358999999999999999999998 799999999999999999
Q ss_pred CceEEeCCCCCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 598 LTAKLSGYNIPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||+++........ + .. +.++|||||||++|||++|.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999998765322110 2 23 77899999999999999984
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-26 Score=228.58 Aligned_cols=178 Identities=16% Similarity=0.151 Sum_probs=142.0
Q ss_pred HHHHHHhcCCCCCCcc--ccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 444 EEIEEATNNFDPTNLI--GEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~i--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.+.....++|++.+.+ |+|+||.||+++. .++..+|+|.+........ |+.....+ +|||++++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~-- 79 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT-- 79 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe--
Confidence 4555556777777777 9999999999994 5688999999875422111 22222212 7999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL- 598 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~- 598 (640)
.....++||||+++|+|.+++.. ...+++.++..++.|+++|++|||+ .+++||||||+||+++.++
T Consensus 80 ------~~~~~~iv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~ 147 (267)
T PHA03390 80 ------TLKGHVLIMDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKD 147 (267)
T ss_pred ------cCCeeEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCC
Confidence 33468999999999999999964 3378999999999999999999998 7999999999999999998
Q ss_pred ceEEeCCCCCccccCCCCc-------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL-------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~-------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++|+|||+++........ +.. +.++|||||||+++||++|.
T Consensus 148 ~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~ 203 (267)
T PHA03390 148 RIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGK 203 (267)
T ss_pred eEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999999998755432111 233 88899999999999999984
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=247.38 Aligned_cols=174 Identities=16% Similarity=0.313 Sum_probs=146.2
Q ss_pred CCCCCccccCCccceEEEEeCC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
|.+...||.|+||.||+|..++ +-..|.|.+........+++.-||++|..++||+||++++.|+. ...+|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------enkLw 105 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------ENKLW 105 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc--------cCceE
Confidence 4456789999999999999554 44567788876666667889999999999999999999998762 34589
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
|..|||.||..+..+-+ -...+.+.++..++++++.||.|||+ .+|||||||+.|||++-+|.++|+|||.+...
T Consensus 106 iliEFC~GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKN 180 (1187)
T ss_pred EEEeecCCchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccc
Confidence 99999999999998875 35679999999999999999999999 79999999999999999999999999998543
Q ss_pred cCCC--------Cc--------------cCC-CCccceehhhHHHHHHhhc
Q 006570 612 KVRN--------TL--------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 612 ~~~~--------~~--------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
.... +. ... +.++|||||||+|.||..+
T Consensus 181 ~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqi 231 (1187)
T KOG0579|consen 181 KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQI 231 (1187)
T ss_pred hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhcc
Confidence 2110 00 223 8999999999999999865
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-26 Score=235.24 Aligned_cols=174 Identities=22% Similarity=0.325 Sum_probs=144.7
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|+..+.||+|+||.||+++. .++..||+|.+..... ...+++.+|++++++++|||++++++++. .+.
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~ 98 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL--------REH 98 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--------eCC
Confidence 56678899999999999994 4688999999874322 22356888999999999999999999885 344
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||++ |++.+++.. ....+++.++..++.+++.|+.|||+ .+|+||||+|+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~-g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 99 TAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred eEEEEEeCCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCc
Confidence 5899999997 588887753 24568999999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... ... +.++|||||||++|||++|+
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~ 221 (317)
T cd06635 173 SIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 221 (317)
T ss_pred cccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCC
Confidence 755332110 123 88999999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=232.99 Aligned_cols=177 Identities=18% Similarity=0.339 Sum_probs=144.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|++|.||+|+. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++. .+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 73 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH--------SE 73 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe--------cC
Confidence 4688889999999999999995 4688999999865322 23467889999999999999999999885 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYN 606 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfG 606 (640)
...++||||++ ++|.+++... ....+++.....++.|++.||+|||+ .+++||||||+||++++ ++.+||+|||
T Consensus 74 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 74 KRLYLVFEYLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred CeEEEEEeccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccc
Confidence 56899999996 5888888542 23346788888999999999999998 69999999999999985 5679999999
Q ss_pred CCccccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++....... . . + .. +.++|||||||++|||+||+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~ 201 (294)
T PLN00009 149 LARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK 201 (294)
T ss_pred cccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 987542110 0 0 2 23 78999999999999999985
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-26 Score=234.11 Aligned_cols=187 Identities=20% Similarity=0.302 Sum_probs=150.3
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecc--cC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTY--QD 522 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~ 522 (640)
...++|++.+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35578899999999999999999964 58899999997542 233457788999999999999999999885321 00
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
...+....++|+||+++ ++.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEe
Confidence 01123478999999976 78777754 23468999999999999999999998 69999999999999999999999
Q ss_pred eCCCCCccccCCC---------C--c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN---------T--L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~---------~--~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||++....... . . ... +.++|||||||+++||++|.
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9999987643211 0 0 122 78899999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-26 Score=232.18 Aligned_cols=175 Identities=22% Similarity=0.381 Sum_probs=146.0
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|+..+.||+|++|.||+|.. .+|..||+|++.... ....+.+.+|++++++++|||++++++++. .+..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~--------~~~~ 72 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH--------SENK 72 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec--------cCCe
Confidence 56678999999999999985 479999999987543 223467889999999999999999999885 3466
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.+++|||++ ++|.+++... ....+++..++.++.|+++||+|||+ .+++||||+|+||++++++.+||+|||+++
T Consensus 73 ~~iv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 73 LYLVFEFLD-LDLKKYMDSS-PLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEEEEeccC-cCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 899999995 6999998652 22468999999999999999999998 699999999999999999999999999987
Q ss_pred cccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... . . + .. +.++||||||+++|||++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 197 (283)
T cd07835 148 AFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRR 197 (283)
T ss_pred ccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCC
Confidence 542110 0 0 1 23 77899999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=234.24 Aligned_cols=175 Identities=19% Similarity=0.278 Sum_probs=147.4
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+|+.. +++.||+|.++... ....+.+.+|++++++++|+||+++++++. .++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 73 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR--------RKG 73 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE--------ECC
Confidence 5788899999999999999954 58899999987532 234578899999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||++++.+..+... ...+++.++..++.+++.|++|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 74 ~~~iv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~ 147 (288)
T cd07833 74 RLYLVFEYVERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFA 147 (288)
T ss_pred EEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecc
Confidence 68999999998777666542 3458999999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCC-----------c-------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT-----------L-------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~-----------~-------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . +. . +.++||||||+++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 199 (288)
T cd07833 148 RALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE 199 (288)
T ss_pred cccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCC
Confidence 76543221 0 22 3 78999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-26 Score=239.23 Aligned_cols=179 Identities=15% Similarity=0.288 Sum_probs=148.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ...
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~ 80 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG----ADF 80 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC----CCC
Confidence 6788889999999999999994 568999999987532 233467788999999999999999998764211 234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+. |+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 81 KDVYVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred ceEEEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEeccccc
Confidence 56899999995 699999863 3458999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCC--------------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT--------------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~--------------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . . .. +.++|||||||++|||++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~ 209 (334)
T cd07855 154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRR 209 (334)
T ss_pred ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCC
Confidence 865422110 0 1 23 78999999999999999884
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-27 Score=243.00 Aligned_cols=171 Identities=20% Similarity=0.295 Sum_probs=144.3
Q ss_pred CccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEE
Q 006570 457 NLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~E 535 (640)
-.+|+|.||+||-|+ ..+...+|||.+........+-+.+|+.+-++++|.|||+++|.|- .++..-|.||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s--------enGf~kIFME 652 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVS--------ENGFFKIFME 652 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccC--------CCCeEEEEee
Confidence 469999999999999 5556789999998776666788999999999999999999999873 4456889999
Q ss_pred ccCCCCHhHHhhccCCCCCC--CHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCCCCcccc
Q 006570 536 HISNGSLRDYLTDWKKKDML--KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPLPSK 612 (640)
Q Consensus 536 y~~~GsL~~~l~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfGla~~~~ 612 (640)
-+|||+|.++++. .=+++ .+.+.-.+.+||++||.|||+ ..|||||||-.|||++. .|.+||+|||.++...
T Consensus 653 qVPGGSLSsLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred cCCCCcHHHHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhc
Confidence 9999999999974 22344 677888999999999999999 69999999999999975 5999999999987542
Q ss_pred CCC----C--c------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 613 VRN----T--L------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~----~--~------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
.-. + . +.+ +.++|||||||++.||.||.
T Consensus 728 ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGr 775 (1226)
T KOG4279|consen 728 GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGR 775 (1226)
T ss_pred cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCC
Confidence 111 0 0 333 99999999999999999994
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=229.52 Aligned_cols=169 Identities=17% Similarity=0.206 Sum_probs=134.8
Q ss_pred ccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHH---HHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 458 LIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVE---LLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.||+|+||.||+|+. .+++.||+|.+...... ....+..|.. .++..+||+|+++++++. ..+..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~ 72 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH--------TPDKL 72 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee--------cCCEE
Confidence 489999999999985 45889999998753211 1122334433 444557999999988774 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++.. ...+++..+..++.|++.|++|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 73 ~~v~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 73 SFILDLMNGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 999999999999998853 4568999999999999999999998 7999999999999999999999999999875
Q ss_pred ccCCCCc---------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNTL---------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~~---------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... +. . +.++||||+||++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~ 193 (278)
T cd05606 147 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 193 (278)
T ss_pred cCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCC
Confidence 4321110 12 3 78899999999999999984
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-26 Score=228.74 Aligned_cols=177 Identities=19% Similarity=0.337 Sum_probs=147.3
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++. ...
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~--------~~~ 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ--------ENG 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec--------cCC
Confidence 4677889999999999999954 58899999987542 233467889999999999999999999874 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGl 607 (640)
..++||||+++++|.+++... ....+++..+..++.|+++||+|||+ .+++|+||||+||++++++ .+||+|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 73 RLFIVMEYCDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred eEEEEEecCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEeccccc
Confidence 689999999999999999752 23457999999999999999999998 6999999999999999885 569999999
Q ss_pred CccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . ... +.++||||||++++||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~ 199 (257)
T cd08225 149 ARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLK 199 (257)
T ss_pred chhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 876533211 0 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=239.74 Aligned_cols=181 Identities=17% Similarity=0.286 Sum_probs=147.7
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|+. .+++.||+|++... .....+++.+|++++++++||||+++++++... ....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQ--KSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccC--CCcc
Confidence 357799999999999999999994 57899999998642 222345678899999999999999999987521 1112
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+....++||||++ ++|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccC
Confidence 3345799999996 589888853 28889999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCCC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||++|.
T Consensus 163 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~ 214 (353)
T cd07850 163 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGT 214 (353)
T ss_pred ccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCC
Confidence 99976533211 0 233 88999999999999999983
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=235.38 Aligned_cols=179 Identities=20% Similarity=0.307 Sum_probs=146.3
Q ss_pred CCCCCCccccCCccceEEEEeC---CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
+|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH------ 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC------
Confidence 3677889999999999999953 47899999998633 33446788999999999999999999998621
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCC--CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC----CCc
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK----ALT 599 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~----~~~ 599 (640)
.+...++||||+++ ++.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++.
T Consensus 75 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~ 150 (316)
T cd07842 75 ADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGV 150 (316)
T ss_pred CCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccce
Confidence 23568999999975 78777753221 2368899999999999999999998 79999999999999999 899
Q ss_pred eEEeCCCCCccccCCCC-------------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNT-------------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~-------------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++....... . + .. +.++|||||||+++||++|.
T Consensus 151 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~ 213 (316)
T cd07842 151 VKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLE 213 (316)
T ss_pred EEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcC
Confidence 99999999886532211 0 2 23 78899999999999999973
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-26 Score=230.67 Aligned_cols=175 Identities=17% Similarity=0.255 Sum_probs=141.8
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|+..+.||+|+||.||+|+. .+++.||+|+++... ........+|+..+.++. |||++++++++... ..+.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~------~~~~ 74 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR------KTGR 74 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC------CCCc
Confidence 45678899999999999994 568899999987542 222334567888999885 99999999988621 2246
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||++ |++.+++.. ....++|.++..++.|++.||+|||+ .+++||||||+||+++. +.+||+|||+++
T Consensus 75 ~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 75 LALVFELMD-MNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEEEEecCC-ccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 899999997 588888864 23468999999999999999999998 69999999999999999 999999999997
Q ss_pred cccCCCC---------c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT---------L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~---------~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . +.. +.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~ 196 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLF 196 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCC
Confidence 6532111 0 223 78999999999999999974
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-26 Score=239.38 Aligned_cols=180 Identities=16% Similarity=0.304 Sum_probs=147.6
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|++.+.||+|+||.||+|+ ..+|+.||+|.+.... ......+.+|++++++++||||+++++++.... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPS---FESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccc---cccc
Confidence 3678899999999999999998 4568999999986432 233467888999999999999999999875321 1233
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ +|.+++. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhccc-CHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccc
Confidence 468999999975 8888875 3458999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCC-------------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT-------------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~-------------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . + .. +.++|||||||++|||++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~ 207 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 865422110 0 2 23 78899999999999999984
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=230.64 Aligned_cols=177 Identities=17% Similarity=0.292 Sum_probs=149.2
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|+..+.||+|+||.||++... +++.||+|.+.... ....+++.+|++++++++||||+++++++. ....
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~~ 73 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY--------NNGD 73 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee--------cCCE
Confidence 5677789999999999999964 68899999987643 234467899999999999999999999885 3356
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++++||+++++|.+++... ...+++..+..++.|++.|++|||+. .+++||||||+||++++++.+||+|||.+.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~ 149 (265)
T cd06605 74 ISICMEYMDGGSLDKILKEV--QGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSG 149 (265)
T ss_pred EEEEEEecCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccch
Confidence 89999999999999999752 25688999999999999999999983 599999999999999999999999999987
Q ss_pred cccCCCC--------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT--------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~--------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . +.. +.++||||||++++||++|.
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~ 196 (265)
T cd06605 150 QLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196 (265)
T ss_pred hhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 5432110 0 234 88999999999999999974
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-28 Score=223.92 Aligned_cols=182 Identities=17% Similarity=0.363 Sum_probs=148.5
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeec--ccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.|....+||+|.||.||+|+. .+|+.||+|++-. ..........+|+.+|..++|+|++.++.+|............
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 344567899999999999994 4577899887643 2334456778999999999999999999999643322222345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+||++|+. +|.-++.. ....++..++.+++.++..||.|+|. ..|+|||+||+|+||+.++..||+|||++
T Consensus 98 t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 68999999988 99999864 34678999999999999999999999 69999999999999999999999999999
Q ss_pred ccccCCCCc---------------------c-CC-CCccceehhhHHHHHHhhc
Q 006570 609 LPSKVRNTL---------------------S-FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 609 ~~~~~~~~~---------------------~-~~-~~~~DvwS~Gvvl~elltG 639 (640)
+........ + ++ +++.|||.-||++.||+||
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtr 225 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTR 225 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHcc
Confidence 765322111 3 34 9999999999999999987
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=226.98 Aligned_cols=168 Identities=18% Similarity=0.277 Sum_probs=143.1
Q ss_pred cccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 459 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
||.|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++. .+...++||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~lv~ 72 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK--------DKKYIYMLM 72 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE--------cCCccEEEE
Confidence 689999999999954 48899999987532 233467999999999999999999999875 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++......
T Consensus 73 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 73 EYCLGGELWTILRD---RGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred ecCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99999999999964 3458899999999999999999998 79999999999999999999999999999865432
Q ss_pred CC---------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 615 NT---------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 615 ~~---------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.. . ... +.++|+||||+++|||++|.
T Consensus 147 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~ 189 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGR 189 (262)
T ss_pred cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCC
Confidence 10 0 223 78899999999999999984
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-26 Score=251.55 Aligned_cols=180 Identities=16% Similarity=0.207 Sum_probs=136.3
Q ss_pred HHhcCCCCCCccccCCccceEEEEeCC--CcEEEEEEe--------------ec---ccCCChHHHHHHHHHHhcCCCcc
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCL--------------KL---KQRHLPQSLMQHVELLSKLRHRH 508 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~h~n 508 (640)
...++|++.+.||+|+||+||+|..+. +...++|.+ .. ........+.+|+++|++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 345789999999999999999987532 222222211 00 01112356889999999999999
Q ss_pred cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC--CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 509 iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
|+++++++. .....|+|+|++. ++|.+++..... ...........|+.|++.||+|||+ .+|||||
T Consensus 225 Iv~l~~~~~--------~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrD 292 (501)
T PHA03210 225 ILKIEEILR--------SEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRD 292 (501)
T ss_pred cCcEeEEEE--------ECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence 999999885 2345799999995 588888754211 1223456678899999999999998 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC---------c---------cCC-CCccceehhhHHHHHHhhc
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT---------L---------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~---------~---------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+|||++.++.+||+|||+++....... . +.. +.++|||||||++|||++|
T Consensus 293 LKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~ 364 (501)
T PHA03210 293 IKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSH 364 (501)
T ss_pred CCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999976532210 0 223 7899999999999999986
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=222.71 Aligned_cols=176 Identities=22% Similarity=0.395 Sum_probs=151.6
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
+|+..+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|||++++++++. .....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~~ 72 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL--------KKDEL 72 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe--------cCCeE
Confidence 4677899999999999999964 68899999997654445678999999999999999999999875 23568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++++||+++++|.+++... ...+++..+..++.+++.|++|||+ .+++||||+|+||++++++.++|+|||.+..
T Consensus 73 ~l~~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 73 WIVMEFCSGGSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EEEEecCCCCcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 9999999999999999752 2568999999999999999999998 7999999999999999999999999999977
Q ss_pred ccCCC--Cc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRN--TL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~--~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... .. +.. +.++||||||++++||++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~ 194 (253)
T cd05122 148 LSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194 (253)
T ss_pred ccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCC
Confidence 65432 10 223 78999999999999999984
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-26 Score=232.18 Aligned_cols=169 Identities=20% Similarity=0.372 Sum_probs=143.7
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~E 535 (640)
..||+|+||.||++.. .+++.||||.+........+.+.+|+.+++.++|+|++++++++. .++..++|||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~~~lv~e 97 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--------VGDELWVVME 97 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE--------eCCEEEEEEe
Confidence 6799999999999985 568999999986544444567899999999999999999999875 3456899999
Q ss_pred ccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCC
Q 006570 536 HISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN 615 (640)
Q Consensus 536 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~ 615 (640)
|+++++|.+++.. ..+++.....++.|++.|++|||+ .+++||||||+||++++++.++|+|||++.......
T Consensus 98 ~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 98 FLEGGALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred cCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 9999999998753 357899999999999999999998 699999999999999999999999999876543211
Q ss_pred C----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 616 T----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 616 ~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
. . +.. +.++||||||+++|||++|.
T Consensus 171 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~ 213 (292)
T cd06657 171 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213 (292)
T ss_pred ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 0 0 223 88999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-26 Score=228.12 Aligned_cols=168 Identities=19% Similarity=0.302 Sum_probs=142.3
Q ss_pred cccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 459 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
||+|+||.||+++.. +|+.+++|.+..... ...+.+.+|++++++++||||+++++.+. .+...++||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--------~~~~~~lv~ 72 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ--------GKKNLYLVM 72 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee--------cCcEEEEEE
Confidence 689999999999965 489999999875432 34567899999999999999999988764 456689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++++|.+++.. ...+++..++.++.|+++||+|||+ .+++||||+|+||++++++.+||+|||++......
T Consensus 73 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 73 EYLPGGDLASLLEN---VGSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 99999999999974 2368999999999999999999998 79999999999999999999999999998754322
Q ss_pred CC------------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 615 NT------------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 615 ~~------------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.. . ... +.++||||||++++|+++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~ 198 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGI 198 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence 10 0 222 77899999999999999984
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.2e-26 Score=230.41 Aligned_cols=176 Identities=23% Similarity=0.412 Sum_probs=147.1
Q ss_pred CCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|+..+.||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++|||++++++++... ....
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK------GKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC------CCCc
Confidence 566789999999999999954 58899999998653 33446788999999999999999999988521 1356
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++ +|.+++.. ....+++..++.++.|+++||+|||+ .+++|+||||+||++++++.+||+|||++.
T Consensus 75 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 75 IYMVFEYMDH-DLTGLLDS--PEVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred EEEEeccccc-cHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEcccccee
Confidence 8999999975 99998864 22568999999999999999999998 699999999999999999999999999987
Q ss_pred cccCCCC----c--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----L--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . + .. +.++||||||++++||+||.
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~ 199 (287)
T cd07840 149 PYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199 (287)
T ss_pred eccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCC
Confidence 6543320 0 1 22 78899999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=223.46 Aligned_cols=175 Identities=24% Similarity=0.402 Sum_probs=149.9
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|++|.||+++.. +++.|++|.+..... ...+.+.+|++++++++|||++++++++. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE--------TSD 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE--------eCC
Confidence 4777899999999999999854 678999999976543 34467899999999999999999999875 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..+++|||+++++|.+++.. ...+++..+..++.|++.|+.|||+ .+|+||||||+||+++.++.+||+|||.+
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 73 SLYIILEYAENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEEEEecCCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 68999999999999999964 3568999999999999999999998 69999999999999999999999999999
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... +.. +.++||||+|++++||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~ 196 (254)
T cd06627 147 TKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196 (254)
T ss_pred eecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCC
Confidence 865433220 223 78899999999999999984
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=235.80 Aligned_cols=180 Identities=14% Similarity=0.295 Sum_probs=146.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..+|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++..... ...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS--GDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc--CCC
Confidence 36888899999999999999994 568999999986432 2234568899999999999999999998753211 112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++|+||+.. +|.++.. ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred CceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCC
Confidence 3457999999965 7877652 358899999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ + .. +.++|||||||++|||++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~ 212 (342)
T cd07879 163 LARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212 (342)
T ss_pred CCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCC
Confidence 99764321110 2 23 78999999999999999985
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=225.25 Aligned_cols=170 Identities=17% Similarity=0.236 Sum_probs=137.2
Q ss_pred CccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHH-hcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELL-SKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|.. .+++.||+|.+..... .....+..|..++ ...+|||++++++++. .++..+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~~~~~~ 73 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ--------SKDYLY 73 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE--------cCCeEE
Confidence 5689999999999985 4688999999864321 1123344555444 4558999999999885 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++..
T Consensus 74 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 74 LVMEYLNGGDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEeccCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999999999964 3468899999999999999999998 69999999999999999999999999998754
Q ss_pred cCCCCc-------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVRNTL-------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~~~-------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... +.. +.++||||||+++|||+||.
T Consensus 148 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 190 (260)
T cd05611 148 LENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY 190 (260)
T ss_pred cccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC
Confidence 321110 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.4e-26 Score=243.16 Aligned_cols=188 Identities=18% Similarity=0.259 Sum_probs=140.4
Q ss_pred HhcCCCCCCccccCCccceEEEEe-----------------CCCcEEEEEEeecccCCChHH--------------HHHH
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-----------------TDGSRVSVKCLKLKQRHLPQS--------------LMQH 497 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 497 (640)
..++|++.++||+|+||+||+|.. .+++.||||+++.......++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 235679999987543322233 3446
Q ss_pred HHHHhcCCCccc-----ceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC---------------------
Q 006570 498 VELLSKLRHRHL-----VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--------------------- 551 (640)
Q Consensus 498 ~~~l~~l~h~ni-----v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------------- 551 (640)
+.++.+++|.++ +++++||.....+........++||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 677777766554 678888764332222234568999999999999999974210
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCC-----------c---
Q 006570 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT-----------L--- 617 (640)
Q Consensus 552 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~-----------~--- 617 (640)
...++|..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... +
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1235678899999999999999998 6999999999999999999999999999865321100 0
Q ss_pred ----c----------------------CC-CCccceehhhHHHHHHhhc
Q 006570 618 ----S----------------------FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 618 ----~----------------------~~-~~~~DvwS~Gvvl~elltG 639 (640)
. .. ..+.||||+||+++||++|
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~ 428 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVP 428 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhC
Confidence 0 01 2357999999999999986
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-26 Score=233.16 Aligned_cols=185 Identities=18% Similarity=0.344 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+++.||+|++..... .....+.+|++++++++||||+++++++..........
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46788899999999999999995 4688999999865432 22356789999999999999999999876433221234
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++ ++.+.+.. ....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCc
Confidence 4568999999975 78777754 24468999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCC---------------------c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT---------------------L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~---------------------~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . ... +.++|||||||++|||++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~ 224 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCC
Confidence 9875421100 0 123 78899999999999999984
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=235.90 Aligned_cols=181 Identities=16% Similarity=0.284 Sum_probs=148.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|...+.||+|+||+||+|+. .+++.||||.+... .......+.+|+++++.++||||+++++++..... +.
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~---~~ 80 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR---EA 80 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc---cc
Confidence 35688899999999999999994 56899999998743 22334567889999999999999999998753211 12
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+. ++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 81 FNDVYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred cCcEEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCc
Confidence 245899999996 699998864 4568999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . . .. +.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 206 (337)
T cd07858 154 LARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRK 206 (337)
T ss_pred cccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCC
Confidence 9976533210 0 1 23 78999999999999999985
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=218.29 Aligned_cols=172 Identities=17% Similarity=0.261 Sum_probs=137.5
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
...||.|..|.|+++++ .+|..+|||.+..... ...+++...++++.+- +.|+||+.+||++. ...+++
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~--------n~dV~I 168 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT--------NTDVFI 168 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee--------CchHHH
Confidence 46799999999999995 4589999999975432 2335666777776665 48999999999972 334789
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
.||.|.. .++.+++. -..++++...=++...+..||.||.+. ++|||||+||+|||+|+.|++|+||||++....
T Consensus 169 cMelMs~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred HHHHHHH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceee
Confidence 9999954 66666653 345688888888999999999999985 799999999999999999999999999986543
Q ss_pred CCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+... ... +-++|||||||.++||+||.
T Consensus 244 dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~ 291 (391)
T KOG0983|consen 244 DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQ 291 (391)
T ss_pred cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhccc
Confidence 22111 223 78899999999999999984
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=235.63 Aligned_cols=178 Identities=17% Similarity=0.295 Sum_probs=146.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc--cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 524 (640)
..++|+..+.||+|+||.||+|... +++.||+|++... .......+.+|+++++++ +||||+++++++..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~------ 78 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA------ 78 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc------
Confidence 3467888899999999999999954 5889999988542 122345677899999999 99999999998742
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
..+...++||||++ ++|.+++.. ..++|..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 79 ENDKDIYLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred CCCceEEEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEee
Confidence 13345899999997 599998864 268899999999999999999998 7999999999999999999999999
Q ss_pred CCCCccccCCCC---------------c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT---------------L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~---------------~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... . ... +.++||||||+++|||+||.
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~ 210 (337)
T cd07852 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK 210 (337)
T ss_pred ccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCC
Confidence 999875422110 0 122 78899999999999999983
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-27 Score=243.77 Aligned_cols=253 Identities=18% Similarity=0.120 Sum_probs=176.3
Q ss_pred CcEEEEEecCCCCCCCC-----------------------CCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeec
Q 006570 75 SRVTELTVIGNKSSPAH-----------------------SPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSL 131 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~-----------------------~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L 131 (640)
++++.|+|.+|.++..- +...+-....+++|+|++|.|++.-.+.|.+|.+|..|.|
T Consensus 125 ghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkL 204 (873)
T KOG4194|consen 125 GHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKL 204 (873)
T ss_pred cceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeec
Confidence 57888888888663211 1111112345555666666665555556666666666666
Q ss_pred ccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCC
Q 006570 132 VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPK 210 (640)
Q Consensus 132 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~ 210 (640)
+.|+++...+..|.+|++|+.|+|..|+|.-.---.|.+|.+|+.|.|..|.++..-.+ |..|.++++|+|+.|+++..
T Consensus 205 srNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~v 284 (873)
T KOG4194|consen 205 SRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAV 284 (873)
T ss_pred ccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhh
Confidence 66666544445555566666666666666522133455666666666666666655555 77788888888888888755
Q ss_pred CCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCC
Q 006570 211 FPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287 (640)
Q Consensus 211 ~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 287 (640)
-... ++.|+.|+|++|.|..+-++++.-+++|++|||++|+|+...+..|..+..|++|+|++|.++..-...|..+
T Consensus 285 n~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~l 364 (873)
T KOG4194|consen 285 NEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGL 364 (873)
T ss_pred hcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHh
Confidence 5544 6788888999999988888888888889999999999988888888888888888888888877666778888
Q ss_pred CCCCEEeccCccCcccCCC---CccCCCCCceeeeccccccCc
Q 006570 288 AKLNFVEISHNLLIGKLPS---CIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 288 ~~L~~L~ls~N~l~~~~p~---~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++|+.|||++|.|++.+.+ .|..+++|+.|.+.+|++...
T Consensus 365 ssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I 407 (873)
T KOG4194|consen 365 SSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSI 407 (873)
T ss_pred hhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeec
Confidence 8888888888888876654 356677888888888877654
|
|
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-25 Score=222.89 Aligned_cols=177 Identities=23% Similarity=0.301 Sum_probs=150.5
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|++|.||+|... ++..|++|.+..... ...+.+.+|++++++++||||+++++.+... ...
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE------EKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC------CCC
Confidence 4677899999999999999965 688999999875542 3457889999999999999999999988521 125
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++++|.+++.. ...+++..+..++.++++|++|||+ .+++|+||+|+||+++.++.+||+|||.+
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred eEEEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccE
Confidence 68999999999999999975 2378999999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCC----c---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT----L---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~----~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . ... +.++||||||++++||++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~ 200 (260)
T cd06606 149 KRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200 (260)
T ss_pred EecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 76643321 0 222 78999999999999999984
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=226.82 Aligned_cols=180 Identities=24% Similarity=0.362 Sum_probs=143.9
Q ss_pred CCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcC---CCcccceeeeEEEecccCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~~~~~ 526 (640)
|++.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+++++++ +|||++++++++..... ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~---~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT---DR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC---CC
Confidence 556789999999999999965 489999999974322 2234566788777665 69999999999864221 12
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....+++|||+++ +|.+++... ....+++..++.++.|+++||+|||+ .+++|+||+|+||++++++.+||+|||
T Consensus 78 ~~~~~l~~e~~~~-~l~~~l~~~-~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 78 ELKLTLVFEHVDQ-DLATYLSKC-PKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred CceeEEEehhccc-CHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccC
Confidence 2348999999974 899988652 23458999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... +.. +.++|||||||++|||++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~ 203 (287)
T cd07838 153 LARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203 (287)
T ss_pred cceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence 98765322110 233 88999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=233.40 Aligned_cols=179 Identities=20% Similarity=0.277 Sum_probs=148.5
Q ss_pred HHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
....++|+..+.||+|+||.||+|+ ..+++.||+|++... .....+.+.+|++++++++||||+++.+++..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 80 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS----- 80 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec-----
Confidence 3467889999999999999999998 457899999988642 22334678899999999999999999998752
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.+...++||||+ +++|.++++. ..+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 81 --~~~~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 81 --PLEDIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred --CCCcEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeC
Confidence 234579999999 5699988853 357888889999999999999999 799999999999999999999999
Q ss_pred CCCCCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||.+......... + .. +.++|||||||++|||+||.
T Consensus 151 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~ 203 (328)
T cd07856 151 DFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203 (328)
T ss_pred ccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCC
Confidence 99998754321110 2 23 88999999999999999984
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-26 Score=232.23 Aligned_cols=176 Identities=19% Similarity=0.259 Sum_probs=146.2
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecc--cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
-..|++.++||+||.+.||++...+.+.+|+|++... +.+..+.|..|++.|.++ .|.+||++++|-. .
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv--------~ 431 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV--------T 431 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--------c
Confidence 3468889999999999999999888889999987643 334457899999999999 4999999999875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
++.+||||||=+- +|..+|+.. ......| .++.|..|++.|+.++|+ .+|||.||||.|+|+ -.|.+||+|||
T Consensus 432 d~~lYmvmE~Gd~-DL~kiL~k~-~~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLl-VkG~LKLIDFG 504 (677)
T KOG0596|consen 432 DGYLYMVMECGDI-DLNKILKKK-KSIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLL-VKGRLKLIDFG 504 (677)
T ss_pred CceEEEEeecccc-cHHHHHHhc-cCCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEE-EeeeEEeeeec
Confidence 5679999999755 999999862 2233335 788999999999999999 699999999999998 45789999999
Q ss_pred CCccccCCCCc------------------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL------------------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~------------------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|..+....+. ..+ ++++||||+||+||+|+.|.
T Consensus 505 IA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgk 569 (677)
T KOG0596|consen 505 IANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGK 569 (677)
T ss_pred hhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcC
Confidence 99887544322 112 89999999999999999884
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=234.00 Aligned_cols=182 Identities=15% Similarity=0.313 Sum_probs=147.9
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|. ..++..||||++.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL--SLD 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc--ccc
Confidence 45679999999999999999998 5578999999986432 223456889999999999999999999874211 111
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+ +++|.+++.. ..+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+|++||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeec
Confidence 123468999999 6799988852 458999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... + .. +.++|||||||+++|+++|.
T Consensus 163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~ 213 (343)
T cd07880 163 GLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213 (343)
T ss_pred ccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999765332111 1 23 78899999999999999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-27 Score=260.87 Aligned_cols=178 Identities=21% Similarity=0.324 Sum_probs=151.1
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.+-+++....||.|.||.||-|. ..+|+..|+|.++... ....+.+.+|+.++..++|||+|+.+|+-.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv-------- 1304 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV-------- 1304 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee--------
Confidence 34467778999999999999999 7779999999987643 334467889999999999999999999865
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
..+.++|.||||++|+|.+.++. ....++.....+..|++.|++|||+ .+||||||||.||++|.+|.+|++||
T Consensus 1305 HRekv~IFMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1305 HREKVYIFMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred cHHHHHHHHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecc
Confidence 34458999999999999999964 4456777778889999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc-------------------------cCCCCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-------------------------SFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-------------------------~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
|.|..+...... .++..++||||+|||++||+||.
T Consensus 1379 Gsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGk 1438 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGK 1438 (1509)
T ss_pred cceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCC
Confidence 999876544311 22377899999999999999995
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=230.29 Aligned_cols=174 Identities=24% Similarity=0.315 Sum_probs=143.6
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|+..+.||+|+||.||+|+. .+++.+|+|.+..... ...+++.+|+++++.++|+|++++++++. ...
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 88 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL--------REH 88 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE--------cCC
Confidence 55678899999999999995 4678999999864322 22356788999999999999999999886 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+. |++.+++.. ....+++.++..++.+++.|+.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~-~~l~~~~~~--~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 162 (308)
T cd06634 89 TAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSA 162 (308)
T ss_pred eeEEEEEccC-CCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccc
Confidence 5899999996 688887753 23458899999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... ... +.++|||||||++|||++|+
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 211 (308)
T cd06634 163 SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211 (308)
T ss_pred eeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCC
Confidence 764332110 123 77999999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=221.47 Aligned_cols=178 Identities=18% Similarity=0.274 Sum_probs=151.1
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||++... +++.|++|++..... ...+++.+|+++++.++|||++++++.+. .+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~--------~~~ 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE--------EKG 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe--------cCC
Confidence 4677889999999999999954 688999999976433 34567899999999999999999998875 335
Q ss_pred eEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..++|+||+++++|.+++.... ....+++..+..++.+++.||+|||+ .+++|+||+|+||++++++.++|+|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccc
Confidence 6899999999999999997532 13678999999999999999999998 6999999999999999999999999999
Q ss_pred CccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . ... +.++||||+|++++||++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~ 200 (258)
T cd08215 150 SKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLK 200 (258)
T ss_pred eeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCC
Confidence 876543320 0 233 78999999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=227.45 Aligned_cols=175 Identities=21% Similarity=0.322 Sum_probs=144.9
Q ss_pred CCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|++.+.||+|+||+||+|+.. +++.|+||++..... .......+|++.+++++ |||++++++++. .+..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~--------~~~~ 72 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR--------ENDE 72 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh--------cCCc
Confidence 566789999999999999964 578999999875432 22334567999999999 999999999875 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+ +|+|.+++.... ...+++.+++.++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||++.
T Consensus 73 ~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 73 LYFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 89999999 789999987522 3468999999999999999999998 699999999999999999999999999997
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++||||||++++||++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~ 196 (283)
T cd07830 148 EIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLR 196 (283)
T ss_pred eccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCC
Confidence 65331110 223 78999999999999999984
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-26 Score=254.32 Aligned_cols=187 Identities=21% Similarity=0.366 Sum_probs=145.3
Q ss_pred HHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
-+...+|++.+.||+||||.||+++ .-||+.||||++.... ...-..+.+|+.++++++|||||+++..+++...+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3456778888999999999999999 3489999999997653 2233568899999999999999999866542110000
Q ss_pred --------------------------------------------------------------------------------
Q 006570 525 -------------------------------------------------------------------------------- 524 (640)
Q Consensus 525 -------------------------------------------------------------------------------- 524 (640)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -----------------------CCC--------CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhh
Q 006570 525 -----------------------NTG--------STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573 (640)
Q Consensus 525 -----------------------~~~--------~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~y 573 (640)
... ..+||-||||+.-.+++++++..... .....++++++|+.||+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 000 35789999999988888886422111 466789999999999999
Q ss_pred cccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC-------C----------C----Cc---------------
Q 006570 574 LHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV-------R----------N----TL--------------- 617 (640)
Q Consensus 574 LH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~-------~----------~----~~--------------- 617 (640)
+|+ ++||||||||.||++|++..+||+|||+|..... . . +.
T Consensus 713 IH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 999 7999999999999999999999999999987210 0 0 00
Q ss_pred -c-CC-CCccceehhhHHHHHHhh
Q 006570 618 -S-FH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 618 -~-~~-~~~~DvwS~Gvvl~ellt 638 (640)
. .. +.|+|+||+|||++||+.
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y 813 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY 813 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc
Confidence 2 14 899999999999999973
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=229.51 Aligned_cols=178 Identities=17% Similarity=0.229 Sum_probs=140.8
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|+..+.||+|+||.||+++. .+++.||+|.+..... .....+.+|+.++.++. ||||+++++++. .+.
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~--------~~~ 76 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF--------REG 76 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe--------cCC
Confidence 344567899999999999994 4689999999875432 23457889999999996 999999999875 234
Q ss_pred eEEEEEEccCCCCHhHHhhc--cCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTD--WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
..+++|||++. ++.++... ......+++..+..++.+++.||+|||+. .+++||||||+||+++.++.+||+|||
T Consensus 77 ~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 77 DCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred cEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecc
Confidence 57899999864 66554321 01235689999999999999999999973 589999999999999999999999999
Q ss_pred CCccccCCCC---------c--------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT---------L--------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~---------~--------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . . .. +.++|||||||++|||++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 207 (288)
T cd06616 154 ISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK 207 (288)
T ss_pred hhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCC
Confidence 9865422110 0 1 13 78999999999999999984
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=234.69 Aligned_cols=182 Identities=17% Similarity=0.278 Sum_probs=146.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC------C
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD------H 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------~ 523 (640)
.+|...+.||+|+||.||+|+. .+++.||+|.+........+.+.+|++++++++||||+++++++...... .
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788899999999999999984 56889999999766555567789999999999999999999876432110 0
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEE
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKL 602 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl 602 (640)
.......++||||++ ++|.+++.. ..+++..++.++.|++.||.|||+ .+|+||||||+||+++. ++.+|+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEE
Confidence 111235799999997 599988853 358899999999999999999998 69999999999999974 567899
Q ss_pred eCCCCCccccCCC-----------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN-----------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~-----------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++...... . . . .. +.++|||||||++|||++|.
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~ 216 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCC
Confidence 9999986542110 0 0 1 23 77999999999999999984
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=250.55 Aligned_cols=182 Identities=21% Similarity=0.387 Sum_probs=150.1
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeC----C----CcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeE
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLT----D----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGH 515 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~ 515 (640)
++...++..+.+.+|+|+||.|++|... . ...||||.++.... ...+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3444455556679999999999999842 1 35799999986433 3457899999999999 69999999999
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-----C------C--CCCCHHHHHHHHHHHHHHhhhcccCCCCCe
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-----K------K--DMLKWPQRMAIIIGATRGVQFLHTGVAPGI 582 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-----~------~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 582 (640)
|. .....++|+||++.|+|.++++..+ . . ..+...+.+.++.|||.||+||++ .++
T Consensus 371 ~t--------~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~ 439 (609)
T KOG0200|consen 371 CT--------QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPC 439 (609)
T ss_pred ec--------cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCc
Confidence 96 2456899999999999999998644 0 0 238899999999999999999999 799
Q ss_pred eccCCCCCceeecCCCceEEeCCCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhh
Q 006570 583 FGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 583 iHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||||+.++|||+.++..+||+|||+|+.......+ ... +.|+|||||||+||||+|
T Consensus 440 vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Eifs 516 (609)
T KOG0200|consen 440 VHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFT 516 (609)
T ss_pred cchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhh
Confidence 99999999999999999999999999854322111 334 999999999999999987
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=228.15 Aligned_cols=175 Identities=19% Similarity=0.270 Sum_probs=144.5
Q ss_pred CCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
+|+..+.||+|+||.||+++. .+++.||||.++... ....+.+.+|++++.++ +||||+++++.+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----- 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----- 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence 366788999999999999974 357889999987432 22346788999999999 5999999987763
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
.+...++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|
T Consensus 76 ---~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 76 ---TDTKLHLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred ---cCCEEEEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEE
Confidence 34568999999999999999864 3468899999999999999999998 79999999999999999999999
Q ss_pred eCCCCCccccCCCC-----------c--------cC--CCCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT-----------L--------SF--HTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~-----------~--------~~--~~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++....... . .. .+.++||||||++++||++|.
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~ 205 (288)
T cd05583 147 TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA 205 (288)
T ss_pred EECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCC
Confidence 99999875422110 0 11 267899999999999999983
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=230.71 Aligned_cols=172 Identities=18% Similarity=0.225 Sum_probs=138.0
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
.+.+|.|+++.||+++. +++.||||++... .....+.+.+|++++++++||||+++++++. ..+..+++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~--------~~~~~~~~ 77 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI--------VDSELYVV 77 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee--------cCCeEEEE
Confidence 34445555555555555 6899999999754 2334468999999999999999999999875 34568999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
|||+++|+|.++++... ...+++.....++.|+++||+|||+ .+|+||||||+||+++.++.+|++|||.+.....
T Consensus 78 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~ 153 (314)
T cd08216 78 SPLMAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIK 153 (314)
T ss_pred EeccCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecc
Confidence 99999999999997532 3458899999999999999999998 6999999999999999999999999998864321
Q ss_pred CCC-----------------c-------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 614 RNT-----------------L-------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 614 ~~~-----------------~-------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... . . .. +.++|||||||++|||++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~ 207 (314)
T cd08216 154 HGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGH 207 (314)
T ss_pred ccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCC
Confidence 100 0 1 12 67899999999999999984
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=227.05 Aligned_cols=179 Identities=16% Similarity=0.193 Sum_probs=131.4
Q ss_pred cCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccCCCh-----------HHHHHHHHHHhcCCCcccceeeeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQRHLP-----------QSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
++|.+.+.||+|+||.||+|+..+ +..+|+|.......... .....+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578889999999999999999644 34566665433221110 112233445667789999999987
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+.... ......++++|++.. ++.+.+.. ....++..+..|+.|++.||+|||+ .+|+||||||+|||++
T Consensus 92 ~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~ 160 (294)
T PHA02882 92 GSFKR----CRMYYRFILLEKLVE-NTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVD 160 (294)
T ss_pred eeEec----CCceEEEEEEehhcc-CHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEc
Confidence 64211 112245788888754 67776643 2335788899999999999999998 7999999999999999
Q ss_pred CCCceEEeCCCCCccccCC---------------CCc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKVR---------------NTL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~---------------~~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++.+||+|||+++..... .+. +.. +.++|||||||+++||++|.
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~ 230 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIK 230 (294)
T ss_pred CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999998754211 000 233 88999999999999999984
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-25 Score=222.88 Aligned_cols=178 Identities=22% Similarity=0.333 Sum_probs=148.8
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|++.+.||+|+||.||+++ ..+++.+|+|.+.... .....++.+|++++++++||||+++++++. ...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~ 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL--------DGN 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc--------cCC
Confidence 47778999999999999998 4468899999987532 223457788999999999999999998875 345
Q ss_pred eEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..++||||+++++|.+++.... ....+++..++.++.+++.||+|||+ .+++|+||+|+||++++++.+|++|||+
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccc
Confidence 6899999999999999986522 23568999999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+......... +.. +.++|+||||++++||++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~ 198 (256)
T cd08530 150 SKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA 198 (256)
T ss_pred hhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 8765432110 223 77899999999999999984
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-25 Score=230.70 Aligned_cols=172 Identities=22% Similarity=0.318 Sum_probs=139.0
Q ss_pred CccccC--CccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEG--SQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
..||+| +||+||+++. .+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++. .+...+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~--------~~~~~~ 75 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT--------TGSWLW 75 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe--------cCCceE
Confidence 456666 8999999995 57999999998754322 2367889999999999999999999885 345689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+||||+++|++.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|++||+.+...
T Consensus 76 ~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 76 VISPFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred EEEecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 9999999999999997532 3458899999999999999999998 69999999999999999999999999753221
Q ss_pred cCC-----------C-------Cc------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 612 KVR-----------N-------TL------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~-----------~-------~~------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... . .. + .. +.++|||||||++|||++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~ 207 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGR 207 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 100 0 00 1 22 68899999999999999983
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-25 Score=226.50 Aligned_cols=174 Identities=24% Similarity=0.333 Sum_probs=143.5
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|...+.||+|+||+||+|+. .+++.|++|++...... ..+.+.+|+++++.++|||++++++++. +..
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 94 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL--------KEH 94 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE--------eCC
Confidence 55567899999999999985 46889999998754322 2356888999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+||||+. |++.+++.. ....+++.+++.++.|++.|++|||+ .+++||||||+||++++++.+||+|||++
T Consensus 95 ~~~lv~e~~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 95 TAWLVMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEEEEecCC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCC
Confidence 6899999996 588888763 24568999999999999999999998 69999999999999999999999999998
Q ss_pred ccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... ... +.++|||||||++|||++|.
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~ 217 (313)
T cd06633 169 SKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 217 (313)
T ss_pred cccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 654321110 123 77899999999999999984
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=231.09 Aligned_cols=174 Identities=16% Similarity=0.272 Sum_probs=142.6
Q ss_pred CCC-CCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC--------------hHHHHHHHHHHhcCCCcccceeeeE
Q 006570 452 NFD-PTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL--------------PQSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 452 ~~~-~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
+|. ..+.||+|+||+||+|+. .+++.||||.++...... ...+.+|++++++++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 443 357799999999999994 468999999986532211 1257889999999999999999998
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+. .+...++||||++ |+|.+++.. ...+++.....++.|++.||+|||+ .+++||||||+||+++
T Consensus 89 ~~--------~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~ 153 (335)
T PTZ00024 89 YV--------EGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFIN 153 (335)
T ss_pred Ee--------cCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEEC
Confidence 85 3456899999997 699999853 4458899999999999999999998 7999999999999999
Q ss_pred CCCceEEeCCCCCccccCCC----------------------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKVRN----------------------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~~----------------------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++.+||+|||++....... . . + .. +.++|||||||++|||+||+
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 154 SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999987544000 0 0 1 22 77899999999999999984
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=224.87 Aligned_cols=174 Identities=22% Similarity=0.387 Sum_probs=146.4
Q ss_pred CCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+..|++++++++|+|++++++++. ....
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------~~~~ 72 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH--------TERK 72 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh--------cCCc
Confidence 456788999999999999954 58999999998653 334467889999999999999999999875 3356
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||++ ++|.+++... ...+++..++.++.+++.||+|||+ .+|+||||+|+||++++++.+||+|||.++
T Consensus 73 ~~~v~e~~~-~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 73 LYLVFEYCD-MDLKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred eEEEecCcC-cCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCccc
Confidence 899999998 5999999752 2468999999999999999999999 699999999999999999999999999987
Q ss_pred cccCCCC----------c-------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT----------L-------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~----------~-------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . +. . +.++|||||||+++||++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~ 196 (282)
T cd07829 147 AFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196 (282)
T ss_pred ccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCC
Confidence 6533210 0 22 3 78999999999999999984
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-26 Score=215.80 Aligned_cols=178 Identities=19% Similarity=0.306 Sum_probs=146.7
Q ss_pred HhcCCCC-CCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDP-TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~-~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
.+++|++ .+.||-|-.|.|..+.. .+++.+|+|++... ...++|+++--+. .|||||++++++...+ +
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~----~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSY----Q 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhc----c
Confidence 3455654 36789999999999984 56899999998632 4567888865555 6999999999875433 3
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl 602 (640)
....+.+|||.|+||.|++.+++ +....+++.++-.|++||+.|+.|||+ .+|.||||||+|+|... +-..||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~-~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQD-RGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHH-cccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEe
Confidence 56778999999999999999987 456679999999999999999999999 89999999999999964 467899
Q ss_pred eCCCCCccccCCCCc---------------cCC--CCccceehhhHHHHHHhhc
Q 006570 603 SGYNIPLPSKVRNTL---------------SFH--TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 603 ~DfGla~~~~~~~~~---------------~~~--~~~~DvwS~Gvvl~elltG 639 (640)
+|||+|+........ +.+ +..+|+||+||++|-|++|
T Consensus 206 tDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 206 TDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred cccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 999999976643321 333 8899999999999999988
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-25 Score=225.94 Aligned_cols=177 Identities=20% Similarity=0.300 Sum_probs=142.4
Q ss_pred cCCCCCCccccCCccceEEEEeCC-CcEEEEEEeecccC-CChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|+..+ ++.||||.++.... ....++.+|++++.+.. ||||+++++++. .+
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~~ 86 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI--------TD 86 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee--------cC
Confidence 567788999999999999999754 88999999975432 23355677887776764 999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ ++.+++.. ....+++..+..++.+++.||+|||+. .+|+||||+|+||++++++.+||+|||+
T Consensus 87 ~~~~~v~e~~~~-~l~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~ 161 (296)
T cd06618 87 SDVFICMELMST-CLDKLLKR--IQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGI 161 (296)
T ss_pred CeEEEEeeccCc-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECcccc
Confidence 568999999854 78777754 234789999999999999999999963 5899999999999999999999999999
Q ss_pred CccccCCCC---------c--------c---CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT---------L--------S---FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~---------~--------~---~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ . . .. +.++||||||+++|||++|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 865422110 0 1 12 67899999999999999984
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-26 Score=234.88 Aligned_cols=229 Identities=19% Similarity=0.078 Sum_probs=158.5
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
.+++.|+|.+|.|...-..++..++.|+.||||.|.|+...-..|..=.++++|+|++|.|+..-...|.++.+|..|.|
T Consensus 125 ghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkL 204 (873)
T KOG4194|consen 125 GHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKL 204 (873)
T ss_pred cceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeec
Confidence 45888999999999888889999999999999999996544467888889999999999999777788999999999999
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCCC---CCCcccccceeecccCcccccCC----------------------
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPK---FPSLSKNIVSVILRNNSLRSEIP---------------------- 233 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~---~~~~~~~L~~L~l~~N~l~~~~p---------------------- 233 (640)
+.|+++..++. |.+|++|+.|+|..|+|.-. ...-+++|+.|.|..|.++..-.
T Consensus 205 srNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~v 284 (873)
T KOG4194|consen 205 SRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAV 284 (873)
T ss_pred ccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhh
Confidence 99999998886 88899999999999997522 22224444444444444444444
Q ss_pred --ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCC
Q 006570 234 --SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311 (640)
Q Consensus 234 --~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~ 311 (640)
.++.+|+.|+.||||+|.|...-++.+.-.++|+.|+|++|+|+...+.+|..+..|+.|+|++|+++..-...|..+
T Consensus 285 n~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~l 364 (873)
T KOG4194|consen 285 NEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGL 364 (873)
T ss_pred hcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHh
Confidence 444445555555555555544444445555555555555555555444455555555555555555544444445556
Q ss_pred CCCceeeeccccccCcc
Q 006570 312 SLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 312 ~~l~~l~l~~N~l~~~~ 328 (640)
++|++||++.|.+++.+
T Consensus 365 ssL~~LdLr~N~ls~~I 381 (873)
T KOG4194|consen 365 SSLHKLDLRSNELSWCI 381 (873)
T ss_pred hhhhhhcCcCCeEEEEE
Confidence 66666666666666544
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=224.84 Aligned_cols=174 Identities=21% Similarity=0.355 Sum_probs=146.4
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|+..+.||+|++|.||+|+. .+++.+++|.++.... ...+.+.+|++++++++|+||+++++++. .+..
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------~~~~ 72 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR--------HKGD 72 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc--------cCCC
Confidence 55678899999999999995 4688999999875432 24567889999999999999999999875 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++ ++.+++... ...+++..++.++.+++.||+|||+ .+|+|+||||+||++++++.+||+|||.+.
T Consensus 73 ~~~v~e~~~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 73 LYLVFEFMDT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEEEEeccCC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 8999999975 999888652 3568999999999999999999998 799999999999999999999999999986
Q ss_pred cccCCC-----C-----c-------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRN-----T-----L-------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~-----~-----~-------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... . . +. . +.++||||||+++|||+||.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 147 SFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred ecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 654322 0 0 23 3 88999999999999999984
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=225.06 Aligned_cols=175 Identities=22% Similarity=0.308 Sum_probs=148.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~ 525 (640)
++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++ ||||+++++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------- 72 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------- 72 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--------
Confidence 3688889999999999999995 468999999987532 223467889999999998 999999998764
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++++||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 73 DEENLYFVLEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred CCceEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCC
Confidence 34568999999999999999974 3469999999999999999999998 69999999999999999999999999
Q ss_pred CCCccccCCCC----------------------------c---------cCC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNT----------------------------L---------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~----------------------------~---------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|++........ . ... +.++||||||++++|+++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g 218 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTG 218 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhC
Confidence 99876533210 0 223 7789999999999999998
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-25 Score=223.82 Aligned_cols=177 Identities=20% Similarity=0.313 Sum_probs=145.9
Q ss_pred CCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC-------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR-------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
|-..++||+|+|+.||+|. +...+.||||+-..... ...+...+|.++-+.++||.||++|+|+..
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl------ 538 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL------ 538 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee------
Confidence 4556889999999999998 66688999998754321 122456789999999999999999999863
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceE
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAK 601 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~k 601 (640)
+.+..+-|+|||+|.+|+-||+. ...+++.++..|+.||+.||.||.. ..++|||-||||.|||+-.. |.+|
T Consensus 539 -DtdsFCTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 539 -DTDSFCTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred -ccccceeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeE
Confidence 33457899999999999999964 4568999999999999999999986 46899999999999999543 8899
Q ss_pred EeCCCCCccccCCCCc-------------------------c---CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNTL-------------------------S---FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~~-------------------------~---~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|.|||+++..+...+. + .. +.|+||||.||++|..+.|.
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGr 681 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGR 681 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccC
Confidence 9999999987543221 2 23 99999999999999999873
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-25 Score=219.15 Aligned_cols=187 Identities=20% Similarity=0.294 Sum_probs=154.6
Q ss_pred CHHHHHHHhcCCCCCCccccCCccceEEEEeCC------CcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeee
Q 006570 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILG 514 (640)
Q Consensus 442 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g 514 (640)
...|+.....+++....+.+|.||.||+|.+++ .+.|-||.++....+ ....+..|...+..+.|||+.++.|
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 355666677788889999999999999996543 456778887654322 2356788999999999999999999
Q ss_pred EEEecccCCCCCCCeEEEEEEccCCCCHhHHhhc-----cCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCC
Q 006570 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD-----WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKT 589 (640)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~-----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~ 589 (640)
++++ +....+++|.++.-|+|..++.. ....+.++..+...++.|++.|++|||. .+|||.||.+
T Consensus 355 V~ie-------~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAa 424 (563)
T KOG1024|consen 355 VSIE-------DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAA 424 (563)
T ss_pred EEee-------ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhh
Confidence 9984 34557999999999999999983 3344567788899999999999999999 7999999999
Q ss_pred CceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh
Q 006570 590 ENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 590 ~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+|++||+..++||+|-.+++..-+..+. ... +..+|||||||+||||+|
T Consensus 425 RNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmt 493 (563)
T KOG1024|consen 425 RNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMT 493 (563)
T ss_pred hcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHh
Confidence 9999999999999999999876444332 334 999999999999999987
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-25 Score=228.56 Aligned_cols=178 Identities=14% Similarity=0.228 Sum_probs=143.2
Q ss_pred CCCCCCccccCCccceEEEEeC-C--CcEEEEEEeeccc--CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-D--GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
+|+..+.||+|+||.||+++.. + +..||+|++.... ....+.+.+|+++++++ +||||+++++++.... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~ 76 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP----G 76 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc----c
Confidence 3667789999999999999953 4 7789999986432 22346788899999999 5999999998764321 1
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....+++++||++ ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 77 ~~~~~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 77 NFNELYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cCCcEEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcC
Confidence 2345789999986 599999853 4568999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCC---------------Cc------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRN---------------TL------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~---------------~~------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++...... .. + .. +.++|||||||++|||++|.
T Consensus 150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~ 207 (332)
T cd07857 150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK 207 (332)
T ss_pred CCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9987532110 00 2 23 78899999999999999884
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-25 Score=229.87 Aligned_cols=179 Identities=17% Similarity=0.284 Sum_probs=148.9
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..... ....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~~ 77 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP---EDFN 77 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc---cccc
Confidence 4778899999999999999954 58999999987543 3345789999999999999999999998753211 1234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+||||++ ++|.+++.. ...+++..++.++.+++.||+|||+ .+|+||||||+||+++.++.++|+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 78 DVYIVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred ceEEEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 6899999998 489999864 3478999999999999999999998 69999999999999999999999999999
Q ss_pred ccccCCCC-------------c-------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNT-------------L-------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~-------------~-------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ . +. . +.++||||||++++||++|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~ 204 (330)
T cd07834 151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRK 204 (330)
T ss_pred EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCC
Confidence 86543320 0 22 3 78999999999999999984
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-25 Score=216.98 Aligned_cols=160 Identities=16% Similarity=0.109 Sum_probs=131.6
Q ss_pred CCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCCC
Q 006570 462 GSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540 (640)
Q Consensus 462 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~G 540 (640)
|.||.||+++. .+++.||+|++.... .+.+|...+....|||++++++++. .....++||||+++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~~~lv~e~~~~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV--------SEDSVFLVLQHAEGG 70 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee--------cCCeEEEEEecCCCC
Confidence 89999999994 568899999997532 2344555556667999999998874 345689999999999
Q ss_pred CHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc---
Q 006570 541 SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL--- 617 (640)
Q Consensus 541 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~--- 617 (640)
+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++|||.+.........
T Consensus 71 ~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 144 (237)
T cd05576 71 KLWSHISK---FLNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAV 144 (237)
T ss_pred CHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCc
Confidence 99999964 3358999999999999999999998 79999999999999999999999999987544321110
Q ss_pred -----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 618 -----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 618 -----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... +.++||||+|+++|||++|.
T Consensus 145 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~ 179 (237)
T cd05576 145 ENMYCAPEVGGISEETEACDWWSLGAILFELLTGK 179 (237)
T ss_pred CccccCCcccCCCCCCchhhHHHHHHHHHHHHHCc
Confidence 223 78899999999999999983
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-25 Score=223.75 Aligned_cols=179 Identities=18% Similarity=0.230 Sum_probs=150.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.+.|..-+.||+|+||.||-++. .+|+.+|+|++.+. ..+.......|.++|.+++.+.||.+--.+ +
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--------e 255 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--------E 255 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee--------c
Confidence 35677889999999999999984 56999999998643 233445667899999999999999874332 3
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+.+.+++|+..|.||+|.-+|.... ...+++..++.++.+|+.||++||. .+||.||+||+|||+|+.|+++|+|.
T Consensus 256 Tkd~LClVLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 256 TKDALCLVLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred CCCceEEEEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeecc
Confidence 5677999999999999998886533 3579999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|..+...... ... +...|.||+||++|||+.|+
T Consensus 332 GLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~ 383 (591)
T KOG0986|consen 332 GLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGH 383 (591)
T ss_pred ceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHccc
Confidence 999877543221 334 88999999999999999985
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=223.93 Aligned_cols=171 Identities=22% Similarity=0.323 Sum_probs=142.4
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.+|+|.||+||-|++ ++|+.||||++.+.. .+...++++|+.+|+.++||.||.+.-.| ++.+.+++
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~--------ET~ervFV 640 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF--------ETPERVFV 640 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee--------cCCceEEE
Confidence 58899999999999995 579999999997642 34557899999999999999999987665 36678999
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEEeCCCCCc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKLSGYNIPL 609 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~DfGla~ 609 (640)
|||-+. |+..+.+-. ....++++........||+.||.|||. ++|+|+|+||+|||+.+. -++||||||+|+
T Consensus 641 VMEKl~-GDMLEMILS-sEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 641 VMEKLH-GDMLEMILS-SEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred Eehhhc-chHHHHHHH-hhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeecccccee
Confidence 999995 577666644 345679999999999999999999999 799999999999999654 479999999999
Q ss_pred cccCCCCc----------------cCC-CCccceehhhHHHHHHhhc
Q 006570 610 PSKVRNTL----------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 610 ~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
.+.+.... ... +..-|+||.||++|--+.|
T Consensus 716 iIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSG 762 (888)
T KOG4236|consen 716 IIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSG 762 (888)
T ss_pred ecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecc
Confidence 98765432 222 7788999999999876665
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=219.38 Aligned_cols=177 Identities=20% Similarity=0.228 Sum_probs=140.8
Q ss_pred CCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc-----cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK-----QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
+|.+.+.||+|+||.||+++.. .+..+++|.++.. ......++.+|++++++++||||+++++++.
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 72 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-------- 72 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh--------
Confidence 4777899999999999999853 3455666665432 1223346778999999999999999998874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+....++||||+++++|.++++... ....+++..++.++.|++.|+.|||+ .+++|+||||+||++++ +.+||+|
T Consensus 73 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 73 ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecc
Confidence 3345899999999999999987532 34568999999999999999999998 79999999999999975 5699999
Q ss_pred CCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++||||||+++|||++|.
T Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~ 202 (260)
T cd08222 149 FGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLA 202 (260)
T ss_pred cCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 9998765321110 222 77899999999999999873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.1e-25 Score=235.27 Aligned_cols=186 Identities=21% Similarity=0.349 Sum_probs=157.6
Q ss_pred HHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCC
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 524 (640)
...++.|.+.+.||.|.+|.||+++ .++++.+|+|+..... ...+++..|.++++.. +|||++.++|++.-...
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~--- 90 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP--- 90 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecC---
Confidence 3345667888999999999999999 5678899999987654 3457888899998887 69999999999874322
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
..++.+|||||||.+||..|+++... ...+.|..+..|++.++.|+.+||. ..++|||||-.|||++.++.+|++|
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEee
Confidence 46778999999999999999998755 7789999999999999999999999 5899999999999999999999999
Q ss_pred CCCCccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||.+......... ... +.++|+||+||+..||..|.
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~ 225 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGA 225 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCC
Confidence 9999876432211 223 88999999999999998773
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-25 Score=230.33 Aligned_cols=182 Identities=17% Similarity=0.299 Sum_probs=147.8
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++|||++++++++.... ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS--SLE 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc--ccc
Confidence 356788899999999999999995 458899999986432 223456788999999999999999998664211 112
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccc
Confidence 234589999999 5699999853 468999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... . .. +.++|||||||++||++||.
T Consensus 163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~ 213 (343)
T cd07851 163 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213 (343)
T ss_pred cccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCC
Confidence 999765322110 1 23 78999999999999999984
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=215.36 Aligned_cols=168 Identities=21% Similarity=0.268 Sum_probs=142.4
Q ss_pred cccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 459 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
||+|+||.||++... +++.+|+|.+..... ...+.+..|++++++++|||++++++.+. .+...++||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~~~v~ 72 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ--------TEEKLYLVL 72 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee--------cCCeeEEEE
Confidence 689999999999954 588999999875432 23457899999999999999999998763 456689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
||+++++|.+++.. ...+++.....++.|+++|+.|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus 73 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 73 EYAPGGELFSHLSK---EGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 99999999999964 3468999999999999999999998 79999999999999999999999999998765332
Q ss_pred C--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 615 N--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 615 ~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
. .. +.. +.++|+||||+++||+++|.
T Consensus 147 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~ 190 (250)
T cd05123 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK 190 (250)
T ss_pred CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCC
Confidence 0 00 223 78899999999999999984
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-25 Score=228.05 Aligned_cols=144 Identities=17% Similarity=0.281 Sum_probs=123.9
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
-|...+.||-|+||+|.+++ .++...+|+|.+++.+ .......+.|.++|...+.+-||+||-.+ ++.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF--------QDk 701 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF--------QDK 701 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe--------ccC
Confidence 36678899999999999998 5557789999997643 22335578899999999999999998433 356
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+.+|+||||++||++-.+|-+ .+.+.+..+..++.++..|+++.|. .|+|||||||.|||||.+|.+||.||||
T Consensus 702 dnLYFVMdYIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 702 DNLYFVMDYIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred CceEEEEeccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccc
Confidence 679999999999999999853 5668888888899999999999998 8999999999999999999999999999
Q ss_pred Cc
Q 006570 608 PL 609 (640)
Q Consensus 608 a~ 609 (640)
+.
T Consensus 776 CT 777 (1034)
T KOG0608|consen 776 CT 777 (1034)
T ss_pred cc
Confidence 85
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-25 Score=205.20 Aligned_cols=171 Identities=14% Similarity=0.323 Sum_probs=145.4
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|++.+.+|+|.|++||.|. ..+++.++||+++.-. .+.+.+|+.+|..+. ||||++++++..++ ..
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp------~S 107 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP------ES 107 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc------cc
Confidence 3567778999999999999998 6678899999998543 478999999999996 99999999987532 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYN 606 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DfG 606 (640)
....+|+||+.+-+...+.. .++..++..++.+++.||.|+|+ +||+|||+||.|++||.. -..+|+|+|
T Consensus 108 ktpaLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 108 KTPSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred cCchhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecc
Confidence 55789999999988777653 47788899999999999999999 899999999999999976 679999999
Q ss_pred CCccccCCCCc----------------cCC--CCccceehhhHHHHHHhh
Q 006570 607 IPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITL 638 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~ellt 638 (640)
+|.++.+...+ ..+ +..-|+|||||++.+|+.
T Consensus 179 LAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miF 228 (338)
T KOG0668|consen 179 LAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 228 (338)
T ss_pred hHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHh
Confidence 99988665443 223 788899999999999975
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-26 Score=213.98 Aligned_cols=176 Identities=18% Similarity=0.314 Sum_probs=144.1
Q ss_pred CCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+..+.||-|+||.||..+ -++|+.||.|++..-.. ...+.+.+|+.+|..++|.|+...+++..-...+ --+.
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d---fFqE 131 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS---FFQE 131 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch---HHHH
Confidence 3446889999999999998 45799999999864322 2357889999999999999999998875311111 1134
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
+|+|+|.|.. +|...+. ..+.++...++.+..||++||.|||+ .+|.||||||.|.|++.+...||||||+|+
T Consensus 132 iYV~TELmQS-DLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 132 LYVLTELMQS-DLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHHHh-hhhheec---cCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccc
Confidence 7899999965 8988885 36778999999999999999999999 799999999999999999999999999999
Q ss_pred cccCCCCc-------------------cCC-CCccceehhhHHHHHHhh
Q 006570 610 PSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 610 ~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
.-+..... .++ +.+.||||.||++.|++-
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHh
Confidence 76544322 344 999999999999999873
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-25 Score=212.88 Aligned_cols=176 Identities=18% Similarity=0.212 Sum_probs=145.3
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCCh---HHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|+..+.+|+|.||.|..++ ..+++.+|+|++++.--... ..-..|-++|+..+||.+..+--.+ +
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF--------Q 238 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF--------Q 238 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh--------c
Confidence 4567778999999999999998 56799999999986532222 3346688999999999988775222 4
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
..+++++||||..||.|+-+|.. ...+++.....+...|+.||.|||+ .+||.||+|.+|.|+|.||++||+||
T Consensus 239 t~drlCFVMeyanGGeLf~HLsr---er~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHLSR---ERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred cCceEEEEEEEccCceEeeehhh---hhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeec
Confidence 66789999999999999988854 4567888888899999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG 639 (640)
|+++.--..... . .. +..+|.|.+|||||||++|
T Consensus 313 GLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCG 364 (516)
T KOG0690|consen 313 GLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCG 364 (516)
T ss_pred ccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhc
Confidence 999864222111 2 22 8899999999999999988
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-25 Score=207.65 Aligned_cols=176 Identities=15% Similarity=0.268 Sum_probs=144.5
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+.|++.+.+|+|.||.+-.++++ ..+.+++|.+... ....++|.+|...--.+ .|.||+.-++..+ ++.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF-------qt~ 94 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAF-------QTS 94 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHh-------hcC
Confidence 346888999999999999999965 4678999988643 23468899998765555 5899998877553 355
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee-cCC-CceEEeCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL-DKA-LTAKLSGY 605 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl-~~~-~~~kl~Df 605 (640)
+.+.+++||+|.|+|.+-+. ...+.+....+++.|++.|+.|||+ .++||||||.+|||| +.| .++|+|||
T Consensus 95 d~YvF~qE~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred ceEEEeeccCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeec
Confidence 67889999999999998884 3457888899999999999999999 799999999999998 333 68999999
Q ss_pred CCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++..+..... ..+ .+.+|||.|||+++.++|||
T Consensus 168 G~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~ 222 (378)
T KOG1345|consen 168 GLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGK 222 (378)
T ss_pred ccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCC
Confidence 999876533221 234 88999999999999999998
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-24 Score=235.65 Aligned_cols=182 Identities=16% Similarity=0.176 Sum_probs=123.8
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-C----CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-D----GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+.. + +..||||++..... .+.+..| .+....+.++..++..+.....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~-- 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVS-- 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccc--
Confidence 4568999999999999999999954 4 68999998764221 1222221 1222223333333222111110
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCC-----------------CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKK-----------------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
...+...++||||+++|+|.++++..... ....+..+..++.|++.||+|||+ .+|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCc
Confidence 12455689999999999999998742110 011233456899999999999998 7999999
Q ss_pred CCCCceeecC-CCceEEeCCCCCccccCCCC-----------c--------c---------------------CC-CCcc
Q 006570 587 LKTENILLDK-ALTAKLSGYNIPLPSKVRNT-----------L--------S---------------------FH-TDRS 624 (640)
Q Consensus 587 lk~~NILl~~-~~~~kl~DfGla~~~~~~~~-----------~--------~---------------------~~-~~~~ 624 (640)
|||+|||+++ ++.+||+|||+|+....... + . .. +.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999986 58999999999975421100 0 0 01 3466
Q ss_pred ceehhhHHHHHHhhc
Q 006570 625 SLYKIILIICVITLC 639 (640)
Q Consensus 625 DvwS~Gvvl~elltG 639 (640)
|||||||++|||+++
T Consensus 361 DVwSlGviL~el~~~ 375 (566)
T PLN03225 361 DIYSAGLIFLQMAFP 375 (566)
T ss_pred ccHHHHHHHHHHHhC
Confidence 999999999999875
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-24 Score=224.16 Aligned_cols=173 Identities=17% Similarity=0.209 Sum_probs=142.0
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++.|.....+|.|+|+.|-++. ..+++..+||++.... .+-.+|+.++... +|||++++.+.+. +
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~--------~ 387 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYE--------D 387 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceec--------C
Confidence 36678888889999999999998 5568899999997552 3345667666555 7999999999874 5
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee-cCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL-DKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl-~~~~~~kl~Df 605 (640)
+...|+|||++.+|-+.+.+.. .. .....+..|+.+++.|+.|||. +++||||+||+|||+ ++.++++|+||
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~~---~~-~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIRS---KP-EFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred CceeeeeehhccccHHHHHHHh---cc-hhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEe
Confidence 6679999999999988887753 22 2236777899999999999999 799999999999999 58899999999
Q ss_pred CCCccccCCCCc-------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|.++........ . .. +.++|+||||++||||++|+
T Consensus 461 G~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~ 510 (612)
T KOG0603|consen 461 GFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR 510 (612)
T ss_pred chhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCC
Confidence 999887654111 2 23 99999999999999999996
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-26 Score=232.81 Aligned_cols=244 Identities=24% Similarity=0.297 Sum_probs=153.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCc-CCCCccccCCCCCCEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLW-GPLPSKINRFWSLEVL 153 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L 153 (640)
.+++.|.|...++...+.. ......|++|++++|.+.. +-+.++.|+.|+.+.+.+|++. .-+|..+..+..|+.|
T Consensus 32 t~~~WLkLnrt~L~~vPeE--L~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~l 108 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLEQVPEE--LSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTIL 108 (1255)
T ss_pred hheeEEEechhhhhhChHH--HHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccccCCCCchhcccccceee
Confidence 4677777766554211100 1123567778888776533 2334566666666666666663 2356666666666666
Q ss_pred EcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCccc-
Q 006570 154 NISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLR- 229 (640)
Q Consensus 154 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~- 229 (640)
|||+|++. +.|..+..-+++-.|+||+|+|..+|.+ |.+|..|-.||||+|++...+|.. +.+|++|.|++|.+.
T Consensus 109 DLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~h 187 (1255)
T KOG0444|consen 109 DLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNH 187 (1255)
T ss_pred ecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhH
Confidence 66666666 6666666666666666666666655554 566666666666666665555543 444444444444321
Q ss_pred ------------------------ccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 230 ------------------------SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 230 ------------------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
..+|.++..+.+|..+|||.|++. .+|+.+.++++|+.|+||+|+|+. +.....
T Consensus 188 fQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~~ 265 (1255)
T KOG0444|consen 188 FQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTEG 265 (1255)
T ss_pred HHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee-eeccHH
Confidence 235666777777777777777776 677777777777777777777764 444455
Q ss_pred CCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 286 CSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
...+|++|+||+|+++ .+|.++..++.|+.|++.+|+++
T Consensus 266 ~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 266 EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc
Confidence 5567777777777776 57777777777777777777654
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-23 Score=201.39 Aligned_cols=175 Identities=23% Similarity=0.348 Sum_probs=148.2
Q ss_pred CCCCCccccCCccceEEEEeCC-CcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
|+..+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++. .....
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~--------~~~~~ 72 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE--------DPEPL 72 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee--------cCCce
Confidence 4567889999999999999654 889999999865443 5678999999999999999999999875 23558
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++++||+++++|.+++.... ..+++.....++.+++.++.|||+ .+++|+|++|+||+++.++.++|+|||.+..
T Consensus 73 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 73 YLVMEYCEGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EEEEeccCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 99999999999999997522 117899999999999999999998 6999999999999999999999999999876
Q ss_pred ccCCC----Cc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRN----TL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~----~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... .. ... +.++|||+||++++||++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~ 197 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGP 197 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCC
Confidence 64432 10 122 67999999999999999985
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-23 Score=207.94 Aligned_cols=177 Identities=18% Similarity=0.259 Sum_probs=143.0
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC--c----ccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH--R----HLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~----niv~l~g~~~~~~~~ 522 (640)
+++|.+...+|+|.||.|-++. ...+..||||+++.-. ...+.-.-|+++++++.+ | -+|.+.+|+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF------ 160 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWF------ 160 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh------
Confidence 6789999999999999999998 3447899999998532 344667789999999942 2 244454444
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC------
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK------ 596 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~------ 596 (640)
+-..+.++|+|.+ |-|++++|.+ ....+++..++..++.|++++++|||+ .+++|-||||+|||+.+
T Consensus 161 --dyrghiCivfell-G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 161 --DYRGHICIVFELL-GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred --hccCceEEEEecc-ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEE
Confidence 3456789999999 5599999976 345678899999999999999999999 69999999999999832
Q ss_pred --------------CCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 597 --------------ALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 597 --------------~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+..+||+|||.|.......+. +-. +.++||||+||||.|+.||.
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGE 306 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccc
Confidence 235799999999887655433 445 99999999999999999983
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.3e-24 Score=209.13 Aligned_cols=176 Identities=18% Similarity=0.256 Sum_probs=141.7
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
.+|.....||+|+||.|..|..+ +.+.+|||+++++- ..+.+--..|-++|.-- +-|.++++...+ +
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF--------Q 420 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF--------Q 420 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh--------h
Confidence 46888999999999999999854 46789999998642 22223344566677665 567888877544 3
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+-+.+|+||||+.+|+|--.++. -..+.++.+..+|.+||-||-|||+ .+||.||||..||++|.+|.+||+||
T Consensus 421 TmDRLyFVMEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred hhhheeeEEEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeec
Confidence 56779999999999999988864 4557888999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++.---.... ..+ +..+|.|||||+||||+.|+
T Consensus 495 GmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQ 547 (683)
T KOG0696|consen 495 GMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 547 (683)
T ss_pred ccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCC
Confidence 999864221111 333 88999999999999999985
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-23 Score=214.39 Aligned_cols=174 Identities=17% Similarity=0.282 Sum_probs=144.0
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--------CChHHHHHHHHHHhcCC---CcccceeeeEEEe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--------HLPQSLMQHVELLSKLR---HRHLVSILGHCIL 518 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~ 518 (640)
.+|+..+.+|+|+||.|+.|.++ +...|+||.+.+..- ...-..-.|+++|..++ |+||++++.++.
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE- 639 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE- 639 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee-
Confidence 46888999999999999999965 456899998865321 11123557999999997 999999999884
Q ss_pred cccCCCCCCCeEEEEEEcc-CCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 519 TYQDHPNTGSTVFLVLEHI-SNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~-~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
+.+++||+||-- ++-+|++++.. ...+++.+...|++||+.|+++||+ ++|||||||-+||.+|.+
T Consensus 640 -------ddd~yyl~te~hg~gIDLFd~IE~---kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 640 -------DDDYYYLETEVHGEGIDLFDFIEF---KPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSN 706 (772)
T ss_pred -------cCCeeEEEecCCCCCcchhhhhhc---cCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecC
Confidence 567799999964 56799999964 5568999999999999999999999 799999999999999999
Q ss_pred CceEEeCCCCCccccCCCCc--------------cC-C--CCccceehhhHHHHHHhh
Q 006570 598 LTAKLSGYNIPLPSKVRNTL--------------SF-H--TDRSSLYKIILIICVITL 638 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~~--------------~~-~--~~~~DvwS~Gvvl~ellt 638 (640)
|-+||+|||.|......... ++ . +..-|||++||+||-++.
T Consensus 707 g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivy 764 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVY 764 (772)
T ss_pred CeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEe
Confidence 99999999999876544321 22 2 889999999999997653
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-24 Score=218.65 Aligned_cols=174 Identities=17% Similarity=0.246 Sum_probs=148.5
Q ss_pred CCCCCccccCCccceEEEEeCCC-cEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTDG-SRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+.....||-|+||.|=.++.... ..+|+|++++.. ....+.+..|.++|...+.|.||++|.-+ .+..
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf--------rd~k 493 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF--------RDSK 493 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh--------ccch
Confidence 34457799999999999986443 348999887542 23446688899999999999999998755 3567
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
++|+.||-|-||.|+..|++ ++.++..+...++..+.+|++|||. .+||.|||||+|.++|.+|.+||.|||+|
T Consensus 494 yvYmLmEaClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFA 567 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFA 567 (732)
T ss_pred hhhhhHHhhcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhH
Confidence 89999999999999999975 6678999999999999999999999 79999999999999999999999999999
Q ss_pred ccccCCCCc-----------------cCCCCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+...... .+++..+|.||+||++|||+||.
T Consensus 568 Kki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~ 616 (732)
T KOG0614|consen 568 KKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGS 616 (732)
T ss_pred HHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCC
Confidence 988765443 33489999999999999999984
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=230.71 Aligned_cols=148 Identities=19% Similarity=0.312 Sum_probs=128.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|.+.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++..++||||+++++++. .
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~--------~ 75 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ--------S 75 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE--------E
Confidence 57888999999999999999954 688999999975432 22367889999999999999999998764 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.++++. ...+++..++.|+.||+.||+|||. .+||||||||+|||++.++.+||+|||
T Consensus 76 ~~~~~lVmEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 76 ANNVYLVMEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred CCEEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 4568999999999999999964 3458899999999999999999998 699999999999999999999999999
Q ss_pred CCcccc
Q 006570 607 IPLPSK 612 (640)
Q Consensus 607 la~~~~ 612 (640)
+++...
T Consensus 150 ls~~~~ 155 (669)
T cd05610 150 LSKVTL 155 (669)
T ss_pred CCcccc
Confidence 998653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-25 Score=228.72 Aligned_cols=242 Identities=25% Similarity=0.243 Sum_probs=116.4
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|||+.|++...+..+ -.-..+..|+||+|.|..+....|.+|+.|-.||||+|++ ..+|+.+..|..|++|+|
T Consensus 104 dLt~lDLShNqL~EvP~~L--E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL-e~LPPQ~RRL~~LqtL~L 180 (1255)
T KOG0444|consen 104 DLTILDLSHNQLREVPTNL--EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL-EMLPPQIRRLSMLQTLKL 180 (1255)
T ss_pred cceeeecchhhhhhcchhh--hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh-hhcCHHHHHHhhhhhhhc
Confidence 3555666666553221110 1113444556666665444444455666666666666666 345555666666666666
Q ss_pred ccCcccc-------------------------cCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCC
Q 006570 156 SSNFIYG-------------------------EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPK 210 (640)
Q Consensus 156 s~N~l~~-------------------------~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~ 210 (640)
++|.+.- .+|.++..|.+|..+|||.|.+...|.-+.++.+|+.|+||+|+|+..
T Consensus 181 s~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL 260 (1255)
T KOG0444|consen 181 SNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITEL 260 (1255)
T ss_pred CCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeee
Confidence 6664421 134444444444444444444444333344444444444444444432
Q ss_pred CCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccC-cCCccccCCCCCcEEEccCCcCCccCCccccCC
Q 006570 211 FPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287 (640)
Q Consensus 211 ~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 287 (640)
--. ...+|++|+||.|+++ .+|..+.+|++|+.|.+.+|+++- -+|..++++.+|+.+..++|++ ..+|+.+..+
T Consensus 261 ~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~L-ElVPEglcRC 338 (1255)
T KOG0444|consen 261 NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKL-ELVPEGLCRC 338 (1255)
T ss_pred eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhcccc-ccCchhhhhh
Confidence 221 1344444455555544 444444455555555544444421 1344444555555555554444 2345555555
Q ss_pred CCCCEEeccCccCcccCCCCccCCCCCceeeecccc
Q 006570 288 AKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 288 ~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~ 323 (640)
..|+.|.|++|++. .+|+.+.-++.+..|++..|.
T Consensus 339 ~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 339 VKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred HHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 55555555555544 345555445555555555443
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=198.69 Aligned_cols=164 Identities=22% Similarity=0.333 Sum_probs=140.2
Q ss_pred CccceEEEEeC-CCcEEEEEEeecccCCC-hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCCC
Q 006570 463 SQGQLYKGFLT-DGSRVSVKCLKLKQRHL-PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540 (640)
Q Consensus 463 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~G 540 (640)
+||.||+|+.. +++.+|+|++....... .+.+.+|++.+++++|+|++++++++. .....+++|||++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~~~~l~~e~~~~~ 72 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE--------DEDKLYLVMEYCDGG 72 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee--------eCCEEEEEEeCCCCC
Confidence 58999999965 48999999997654444 688999999999999999999999885 235689999999999
Q ss_pred CHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc---
Q 006570 541 SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL--- 617 (640)
Q Consensus 541 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~--- 617 (640)
+|.+++.. ...+++..+..++.++++++.|||+ .+++|+||+|+||++++++.++++|||.+.........
T Consensus 73 ~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 73 DLFDLLKK---RGRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred CHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccc
Confidence 99999964 2238899999999999999999998 69999999999999999999999999998866442100
Q ss_pred -------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 618 -------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 618 -------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
... +.++||||||++++|+++|.
T Consensus 147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~ 183 (244)
T smart00220 147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGK 183 (244)
T ss_pred cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 233 78999999999999999984
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.3e-22 Score=221.65 Aligned_cols=277 Identities=21% Similarity=0.287 Sum_probs=144.2
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCCCCC----CCCCCCCCCCCC-----------CCcccEEeCCCcEEEEEecCCCCCCCC
Q 006570 27 GQLTPSETRILFQVQKLLEYPEVLQG----WTDWTNFCYLPS-----------SSSLKIVCTNSRVTELTVIGNKSSPAH 91 (640)
Q Consensus 27 ~~~~~~~~~~l~~~k~~~~~~~~l~~----W~~~~~~C~~~~-----------~~~~gv~C~~~~v~~l~l~~~~~~~~~ 91 (640)
+..+++|.+.+++..+.+..|+.+.+ |+..+++|--.+ .+...|.|....||.+.+.|....+..
T Consensus 58 ~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~~ 137 (754)
T PRK15370 58 ETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSA 137 (754)
T ss_pred CCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCCcccccccccccccccC
Confidence 45678999999999999998987777 998899997665 455679998888887777664221110
Q ss_pred C-----------------------------------------------------CCCcCCCccccccccCccCCCChhhh
Q 006570 92 S-----------------------------------------------------PKPTFGKFSASQQSLSANFNIDRFFT 118 (640)
Q Consensus 92 ~-----------------------------------------------------~~~~~~~~~l~~l~l~~n~~~~~~~~ 118 (640)
. ..|......++.|+|++|.+.. +|.
T Consensus 138 ~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~LtsLP~~Ip~~L~~L~Ls~N~Lts-LP~ 216 (754)
T PRK15370 138 SGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTTIPACIPEQITTLILDNNELKS-LPE 216 (754)
T ss_pred CCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCcCCcccccCCcEEEecCCCCCc-CCh
Confidence 0 0000011234444444444432 222
Q ss_pred hhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCC
Q 006570 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLE 198 (640)
Q Consensus 119 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 198 (640)
.+. ++|+.|+|++|+++ .+|..+. .+|+.|+|++|.+. .+|..+. ++|+.|+|++|+|+.++..+. ++|+
T Consensus 217 ~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~ 286 (754)
T PRK15370 217 NLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISCLPENLP--EELR 286 (754)
T ss_pred hhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccCccccccC--CCCc
Confidence 221 24555555555543 2343332 24555555555554 4444432 345555555555554333232 3455
Q ss_pred eeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 199 ELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 199 ~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
.|+|++|+|+...+...++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+.
T Consensus 287 ~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~ 360 (754)
T PRK15370 287 YLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV 360 (754)
T ss_pred EEECCCCccccCcccchhhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc
Confidence 55555555554322223445555555555542 333222 355555555555553 343332 455666666666543
Q ss_pred cCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 279 ALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 279 ~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
+|..+. ++|+.|++++|+|+ .+|..+. ..|+.|++++|+++.
T Consensus 361 -LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~~ 402 (754)
T PRK15370 361 -LPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLVR 402 (754)
T ss_pred -CChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCccc
Confidence 444332 45566666666655 3343332 235555555555553
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.6e-23 Score=216.17 Aligned_cols=175 Identities=19% Similarity=0.328 Sum_probs=152.0
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..++|.....+|.|.||.|||++ ...++..|+|.++.....+..-+.+|+-+++..+|||||.++|.+. ..
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsyl--------r~ 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYL--------RR 84 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhh--------hh
Confidence 34678888999999999999999 5679999999999877666777889999999999999999999875 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+..|+.||||.+|+|.+..+. ..++++.++..+++...+|++|||+ ++-+|||||-.|||+++.+.+|++|||.
T Consensus 85 dklwicMEycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgv 158 (829)
T KOG0576|consen 85 DKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGV 158 (829)
T ss_pred cCcEEEEEecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCc
Confidence 558999999999999998864 6679999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc---------------------cCCCCccceehhhHHHHHHh
Q 006570 608 PLPSKVRNTL---------------------SFHTDRSSLYKIILIICVIT 637 (640)
Q Consensus 608 a~~~~~~~~~---------------------~~~~~~~DvwS~Gvvl~ell 637 (640)
+..+...... +.-..++|||+.|+...|+-
T Consensus 159 saqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~ 209 (829)
T KOG0576|consen 159 SAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELG 209 (829)
T ss_pred hhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhh
Confidence 8776432111 22289999999999998874
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-22 Score=195.51 Aligned_cols=178 Identities=19% Similarity=0.300 Sum_probs=141.6
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+|.....+|.|+- .|..+. .-.+++||+|++... .....++..+|..++..++|+|+++++.++. .+...++.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ft--P~~~l~~~ 93 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFT--PQKTLEEF 93 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccC--ccccHHHH
Confidence 34666778888887 555554 224789999988542 2234567889999999999999999998874 22222234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+|||||.. +|.+.++ -.++-.....|..|++.|++|||+ .+|+||||||+||++..+..+||.|||+
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL-----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchh
Confidence 568999999965 9999886 246778899999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCC---c-------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT---L-------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~---~-------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+.....-. + +.. .+.+||||.||++.||++|+
T Consensus 165 ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~ 214 (369)
T KOG0665|consen 165 ARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGT 214 (369)
T ss_pred hcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhce
Confidence 987654310 0 444 88999999999999999985
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-21 Score=201.73 Aligned_cols=140 Identities=18% Similarity=0.165 Sum_probs=111.6
Q ss_pred HhcCCCCCCccccCCccceEEEEeC--CCcEEEEEEeeccc-----CCChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT--DGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
...+|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+++|++++|+|+++.+..+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 4567999999999999999999854 57788999875321 11245689999999999999998533211
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC-CCCceeecCCCce
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL-KTENILLDKALTA 600 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl-k~~NILl~~~~~~ 600 (640)
...|+||||+++++|.. +. ... ...++.++++||+|||+ .+|+|||| ||+|||++.++.+
T Consensus 91 ------~~~~LVmE~~~G~~L~~-~~---~~~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~i 151 (365)
T PRK09188 91 ------GKDGLVRGWTEGVPLHL-AR---PHG------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEA 151 (365)
T ss_pred ------CCcEEEEEccCCCCHHH-hC---ccc------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCE
Confidence 12699999999999963 21 111 14678899999999999 79999999 9999999999999
Q ss_pred EEeCCCCCcccc
Q 006570 601 KLSGYNIPLPSK 612 (640)
Q Consensus 601 kl~DfGla~~~~ 612 (640)
||+|||+|+...
T Consensus 152 kLiDFGlA~~~~ 163 (365)
T PRK09188 152 AVIDFQLASVFR 163 (365)
T ss_pred EEEECccceecc
Confidence 999999998653
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-22 Score=214.90 Aligned_cols=172 Identities=20% Similarity=0.343 Sum_probs=134.4
Q ss_pred CCCCCccccCCccc-eEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeE
Q 006570 453 FDPTNLIGEGSQGQ-LYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 453 ~~~~~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
|...+.+|.|+-|+ ||+|.+ +|+.||||++-.. ..+-..+|+..|+.- +|||||++++.- ++....
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E--------~d~qF~ 578 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSE--------QDRQFL 578 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeec--------cCCceE
Confidence 44567789999874 799998 4889999998633 234567999999888 699999987532 356779
Q ss_pred EEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---C--CceEEeC
Q 006570 531 FLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---A--LTAKLSG 604 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~--~~~kl~D 604 (640)
||..|.|.. +|.+++... .......-...+.+..|++.||++||+ .+||||||||.||||+. + ..|+|+|
T Consensus 579 YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 579 YIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecc
Confidence 999999966 999999753 111111114457788999999999999 79999999999999976 2 5899999
Q ss_pred CCCCccccCCCCc---------------------cCCCCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL---------------------SFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~---------------------~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ...+.++||+|+|||+|+.++|+
T Consensus 655 fglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG 711 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGG 711 (903)
T ss_pred cccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCC
Confidence 9999876443222 22377899999999999999984
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-22 Score=190.67 Aligned_cols=176 Identities=19% Similarity=0.211 Sum_probs=145.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|+....||+|+|..|..+++ ++.+.+|+|++++.- ..+.+-.+.|-.+.... +||.+|.+..++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-------- 320 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-------- 320 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh--------
Confidence 46788899999999999999995 567899999998642 23334556677777666 799999887644
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+++..+++|.||+++|+|.-+++. ...+++..+..+...|.-||.|||+ .+||.||+|..|||+|..|.+|+.|
T Consensus 321 qtesrlffvieyv~ggdlmfhmqr---qrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 321 QTESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred cccceEEEEEEEecCcceeeehhh---hhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecc
Confidence 466789999999999999877753 5669999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhc
Q 006570 605 YNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 605 fGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
||+.+.--..... +.. ....|.|++||+|+||+.|
T Consensus 395 ygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmag 447 (593)
T KOG0695|consen 395 YGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAG 447 (593)
T ss_pred cchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcC
Confidence 9999864222211 334 8899999999999999987
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=182.31 Aligned_cols=165 Identities=27% Similarity=0.485 Sum_probs=139.5
Q ss_pred cccCCccceEEEEeCC-CcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEEc
Q 006570 459 IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEH 536 (640)
Q Consensus 459 ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey 536 (640)
||+|.+|.||+++..+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++. .....+++|||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--------~~~~~~~~~e~ 72 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE--------DENHLYLVMEY 72 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee--------cCCeEEEEEec
Confidence 6899999999999654 889999999854332 3478999999999999999999999885 23568999999
Q ss_pred cCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCCCCccccCCC
Q 006570 537 ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPLPSKVRN 615 (640)
Q Consensus 537 ~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfGla~~~~~~~ 615 (640)
+++++|.+++... ...+++..+..++.+++++++|||+ .+++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 73 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 73 CEGGSLKDLLKEN--EGKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 9999999999642 1468899999999999999999999 69999999999999999 8999999999997654331
Q ss_pred --C------c---------cC-C-CCccceehhhHHHHHH
Q 006570 616 --T------L---------SF-H-TDRSSLYKIILIICVI 636 (640)
Q Consensus 616 --~------~---------~~-~-~~~~DvwS~Gvvl~el 636 (640)
. . .. . +.+.|+|++|++++||
T Consensus 148 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 148 SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred chhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 0 0 22 3 7889999999999986
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=195.22 Aligned_cols=135 Identities=22% Similarity=0.374 Sum_probs=114.7
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-----C---cccceeeeEEEeccc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----H---RHLVSILGHCILTYQ 521 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~g~~~~~~~ 521 (640)
.+|...++||-|.|++||+|. ..+.+.||+|+.+.. ....+....||++|++++ | ..||+|++.+...+.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 578889999999999999999 556789999999843 345677788999999983 3 379999998875443
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
.+.+++||+|+. |-+|..+|..+ ..+.++...+..|++||+.||.|||.+| +|||-||||+|||+
T Consensus 157 ----NG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 ----NGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred ----CCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 678899999999 55999999763 4556899999999999999999999985 99999999999998
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.8e-24 Score=208.72 Aligned_cols=237 Identities=25% Similarity=0.303 Sum_probs=168.7
Q ss_pred EEEEEecCCCCCCCCCCCCcCC-CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 77 VTELTVIGNKSSPAHSPKPTFG-KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 77 v~~l~l~~~~~~~~~~~~~~~~-~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.+.+++..|+++..+ |..+ ...+..++.++|.+ ..+|+.++.+..|+.|+.++|.+ ..+|+.++.+..|+.|+.
T Consensus 70 l~vl~~~~n~l~~lp---~aig~l~~l~~l~vs~n~l-s~lp~~i~s~~~l~~l~~s~n~~-~el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 70 LTVLNVHDNKLSQLP---AAIGELEALKSLNVSHNKL-SELPEQIGSLISLVKLDCSSNEL-KELPDSIGRLLDLEDLDA 144 (565)
T ss_pred eeEEEeccchhhhCC---HHHHHHHHHHHhhcccchH-hhccHHHhhhhhhhhhhccccce-eecCchHHHHhhhhhhhc
Confidence 455666666553211 1111 24555666677665 45666777777777777777777 456667777777777777
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCC
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p 233 (640)
.+|+++ .+|+.+.++.+|..|++.+|++...+|..-+++.|+.||..+|.++..+|.. +.+|+.|+|..|++. .+|
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP 222 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLP 222 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCC
Confidence 777777 6777777777777777777777777777555777777777777776666654 677777888888886 566
Q ss_pred ccccCCCCccEEEccCCcccCcCCcccc-CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCC
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLF-SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNS 312 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~ 312 (640)
+|..+..|.+|+++.|+|. .+|++.. +++++..|||..|++.. .|+.+..+++|++||+|+|.|+ .+|.+++++
T Consensus 223 -ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke-~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl- 297 (565)
T KOG0472|consen 223 -EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKE-VPDEICLLRSLERLDLSNNDIS-SLPYSLGNL- 297 (565)
T ss_pred -CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeecccccccc-CchHHHHhhhhhhhcccCCccc-cCCcccccc-
Confidence 7777888888888888877 5666655 77888888888888854 7777777888888888888887 466677777
Q ss_pred CCceeeecccccc
Q 006570 313 LNRTVVSTWNCLS 325 (640)
Q Consensus 313 ~l~~l~l~~N~l~ 325 (640)
.|+.+.+.+|.+.
T Consensus 298 hL~~L~leGNPlr 310 (565)
T KOG0472|consen 298 HLKFLALEGNPLR 310 (565)
T ss_pred eeeehhhcCCchH
Confidence 7777777777664
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-21 Score=185.50 Aligned_cols=173 Identities=12% Similarity=0.106 Sum_probs=134.0
Q ss_pred HHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChH---------HHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ---------SLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
....+|...+.+|.|+||.||.... ++..+|+|.+........+ .+.+|++.+.+++||+|..+..+...
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3467899999999999999999766 5778999999754333222 26889999999999999999988654
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
............++||||++|.+|.++.. ++. ....+++.++..+|+ .+++|||+||+||++++++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC
Confidence 32221112345799999999999988742 222 245689999999998 6999999999999999988
Q ss_pred ceEEeCCCCCccccCCCCc-----cCC-CCccceehhhHHHHHH
Q 006570 599 TAKLSGYNIPLPSKVRNTL-----SFH-TDRSSLYKIILIICVI 636 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~-----~~~-~~~~DvwS~Gvvl~el 636 (640)
++++|||..+........ .+. ..++|+||||+.+...
T Consensus 173 -i~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred -EEEEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHH
Confidence 999999998766433222 333 6799999999988654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.1e-21 Score=181.66 Aligned_cols=141 Identities=12% Similarity=0.104 Sum_probs=108.7
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCC--C-------hHH-----------------HHHHHHHHhcCCCccc
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--L-------PQS-----------------LMQHVELLSKLRHRHL 509 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~h~ni 509 (640)
...||+|+||.||+|...+|+.||||+++..... . ... ...|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999878999999999754211 1 112 2349999999988776
Q ss_pred ceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhc-ccCCCCCeeccCCC
Q 006570 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL-HTGVAPGIFGNNLK 588 (640)
Q Consensus 510 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrDlk 588 (640)
.....+.. ...++||||++++++...... ...+++.+...++.|++.+|+|+ |+ .+|+|||||
T Consensus 82 ~~p~~~~~----------~~~~iVmE~i~g~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlk 145 (190)
T cd05147 82 PCPEPILL----------KSHVLVMEFIGDDGWAAPRLK---DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLS 145 (190)
T ss_pred CCCcEEEe----------cCCEEEEEEeCCCCCcchhhh---cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 44332211 113899999998877655322 34688999999999999999999 56 699999999
Q ss_pred CCceeecCCCceEEeCCCCCccccC
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
|+||+++ ++.++|+|||+|.....
T Consensus 146 P~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 146 EYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred HHHEEEE-CCcEEEEEccccccCCC
Confidence 9999998 47899999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-21 Score=198.54 Aligned_cols=179 Identities=15% Similarity=0.235 Sum_probs=149.6
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC------CcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR------HRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~g~~~~~~~ 521 (640)
.-..|.+....|+|-|++|.+|.. ..|..||||++..... ..+.=.+|+++|++++ --|+++++..+.
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~---- 504 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK---- 504 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh----
Confidence 345688888899999999999994 4588999999985432 2345568999999995 247888876553
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-Cce
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTA 600 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ 600 (640)
...++|||+|-..- +|.++|..+.....|....+..++.|+.-||..|.. .+|+|.||||.|||+++. ...
T Consensus 505 ----hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 505 ----HKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred ----hcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCccee
Confidence 45679999998854 999999988888889999999999999999999998 699999999999999987 678
Q ss_pred EEeCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||||||.|..+....-. +.. +...|+||.||.||||.||+
T Consensus 577 KLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGk 632 (752)
T KOG0670|consen 577 KLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGK 632 (752)
T ss_pred eeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccc
Confidence 99999999887654432 455 89999999999999999995
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-23 Score=207.27 Aligned_cols=243 Identities=20% Similarity=0.207 Sum_probs=211.7
Q ss_pred EEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcc
Q 006570 77 VTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNIS 156 (640)
Q Consensus 77 v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 156 (640)
.+.+.++.|.+..... .......+..+++++|.. ...|++++.+..++.|+.++|++ ..+|++++.+.+|+.|+.+
T Consensus 47 l~~lils~N~l~~l~~--dl~nL~~l~vl~~~~n~l-~~lp~aig~l~~l~~l~vs~n~l-s~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 47 LQKLILSHNDLEVLRE--DLKNLACLTVLNVHDNKL-SQLPAAIGELEALKSLNVSHNKL-SELPEQIGSLISLVKLDCS 122 (565)
T ss_pred hhhhhhccCchhhccH--hhhcccceeEEEeccchh-hhCCHHHHHHHHHHHhhcccchH-hhccHHHhhhhhhhhhhcc
Confidence 4456667766522111 112335677888888887 45678899999999999999999 5789999999999999999
Q ss_pred cCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCc
Q 006570 157 SNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~ 234 (640)
+|.+. ++|++++.+..|..|+..+|+++..++++..+.+|..|++.+|++....|.. ++.|++|+...|.+. .+|+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~ 200 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPP 200 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCCh
Confidence 99999 8999999999999999999999999999999999999999999998887765 799999999999996 8999
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc-CCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS-CSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
.++.+.+|+.|+|..|+|. .+| +|.++..|++|+++.|+|. .+|.+.. .+.+|..|||..|+++ .+|..+.-+.+
T Consensus 201 ~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrs 276 (565)
T KOG0472|consen 201 ELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRS 276 (565)
T ss_pred hhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhh
Confidence 9999999999999999998 677 7999999999999999995 5777665 8999999999999998 79999999999
Q ss_pred CceeeeccccccCccC
Q 006570 314 NRTVVSTWNCLSGVNT 329 (640)
Q Consensus 314 l~~l~l~~N~l~~~~~ 329 (640)
|..+|+++|.+++.++
T Consensus 277 L~rLDlSNN~is~Lp~ 292 (565)
T KOG0472|consen 277 LERLDLSNNDISSLPY 292 (565)
T ss_pred hhhhcccCCccccCCc
Confidence 9999999999999765
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.5e-20 Score=175.23 Aligned_cols=142 Identities=15% Similarity=0.112 Sum_probs=111.6
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCC---------------------C-----hHHHHHHHHHHhcCCCccc
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH---------------------L-----PQSLMQHVELLSKLRHRHL 509 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~ni 509 (640)
...||+|+||.||+|+..+|+.||||+++..... . ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999999754211 0 1224678999999999987
Q ss_pred ceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHH-hhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY-LTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 510 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
.....+.. . ..++||||++++++... +. ...++..+...++.+++.++.|+|+. .+|+|||||
T Consensus 82 ~~p~~~~~--------~--~~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlk 145 (190)
T cd05145 82 PVPEPILL--------K--KNVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLS 145 (190)
T ss_pred CCceEEEe--------c--CCEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCC
Confidence 55444332 0 13899999998865443 32 23567888999999999999999983 499999999
Q ss_pred CCceeecCCCceEEeCCCCCccccCC
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
|+||+++ ++.++|+|||+++.....
T Consensus 146 P~NIll~-~~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 146 EYNILYH-DGKPYIIDVSQAVELDHP 170 (190)
T ss_pred hhhEEEE-CCCEEEEEcccceecCCC
Confidence 9999999 889999999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-20 Score=209.35 Aligned_cols=227 Identities=22% Similarity=0.315 Sum_probs=182.6
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
..++.|+|++|.++.. + .....+|+.|+|++|.+. .+|..+. ..|+.|+|++|++. .+|..+. ++|+.|+
T Consensus 199 ~~L~~L~Ls~N~LtsL-P---~~l~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~ 268 (754)
T PRK15370 199 EQITTLILDNNELKSL-P---ENLQGNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLD 268 (754)
T ss_pred cCCcEEEecCCCCCcC-C---hhhccCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEE
Confidence 3578888988887532 2 112258999999999876 4565543 47999999999996 7887765 5899999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 234 (640)
|++|+|+ .+|..+. ++|+.|+|++|+|++.++.+. ++|+.|++++|+++...+...++|+.|++++|.+++ +|.
T Consensus 269 Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~ 342 (754)
T PRK15370 269 LFHNKIS-CLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTALPETLPPGLKTLEAGENALTS-LPA 342 (754)
T ss_pred CcCCccC-ccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCccccCCccccccceeccccCCcccc-CCh
Confidence 9999999 6888765 589999999999998765543 479999999999987555567899999999999985 777
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCc----cC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI----GS 310 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~----~~ 310 (640)
.+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+. +|..+. ..|+.|++++|+|+ .+|..+ ..
T Consensus 343 ~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~ 413 (754)
T PRK15370 343 SLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGE 413 (754)
T ss_pred hhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhc
Confidence 664 68999999999998 5676653 689999999999986 676654 47999999999998 566544 44
Q ss_pred CCCCceeeeccccccC
Q 006570 311 NSLNRTVVSTWNCLSG 326 (640)
Q Consensus 311 ~~~l~~l~l~~N~l~~ 326 (640)
.+.+..+++.+|.++.
T Consensus 414 ~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 414 GPQPTRIIVEYNPFSE 429 (754)
T ss_pred CCCccEEEeeCCCccH
Confidence 5778899999999863
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-19 Score=202.21 Aligned_cols=223 Identities=24% Similarity=0.236 Sum_probs=144.6
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
+++.|++.+|+++. ++.. .++|++|+|++|.+.. +|.. .++|+.|+|++|.++ .+|..+ .+|+.|+|
T Consensus 223 ~L~~L~L~~N~Lt~-LP~l----p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~L 289 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPAL----PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWI 289 (788)
T ss_pred CCCEEEccCCcCCC-CCCC----CCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhch---hhcCEEEC
Confidence 56777777777743 2221 2577888888877654 3432 245555666655553 233211 33445555
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCCcc-----------------CcCcCCeeEccCCCCCCCCCCccccc
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQ-----------------RLVLLEELNLGGNDFGPKFPSLSKNI 218 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-----------------~l~~L~~L~L~~N~l~~~~~~~~~~L 218 (640)
++|+|+ .+|.. +++|+.|+|++|+|+++++... -..+|++|+|++|+|+. +|....+|
T Consensus 290 s~N~Lt-~LP~~---p~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls~-LP~lp~~L 364 (788)
T PRK15387 290 FGNQLT-SLPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLAS-LPTLPSEL 364 (788)
T ss_pred cCCccc-ccccc---ccccceeECCCCccccCCCCcccccccccccCccccccccccccceEecCCCccCC-CCCCCccc
Confidence 555554 33331 2455555555555554322100 01367777777777764 44456677
Q ss_pred ceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCc
Q 006570 219 VSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298 (640)
Q Consensus 219 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N 298 (640)
+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|
T Consensus 365 ~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~N 432 (788)
T PRK15387 365 YKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRN 432 (788)
T ss_pred ceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccC
Confidence 777777777773 5543 2468899999999985 5543 3578899999999976 6653 357888999999
Q ss_pred cCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 299 LLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 299 ~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+|+ .+|..+..++.+..+++++|++++..+
T Consensus 433 qLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 433 QLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred ccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 998 789999999999999999999998754
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-20 Score=184.90 Aligned_cols=145 Identities=21% Similarity=0.349 Sum_probs=124.6
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
+....+.|...++||+|.|++||++... ..+.||+|.+...+ ....+..|+++|..+ .+.||+++.++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~r--- 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFR--- 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhc---
Confidence 4445667889999999999999999843 46789999987543 357799999999999 5899999988663
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-Cc
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LT 599 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~ 599 (640)
.++.+.+|+||++.-+..++... ++..++..+++.+..||+++|+ .|||||||||+|+|.+.. +.
T Consensus 106 -----nnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 106 -----NNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred -----cCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCC
Confidence 45668999999999999998864 6788999999999999999999 699999999999999866 77
Q ss_pred eEEeCCCCCc
Q 006570 600 AKLSGYNIPL 609 (640)
Q Consensus 600 ~kl~DfGla~ 609 (640)
-.|.|||+|.
T Consensus 172 g~LvDFgLA~ 181 (418)
T KOG1167|consen 172 GVLVDFGLAQ 181 (418)
T ss_pred ceEEechhHH
Confidence 8999999997
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-21 Score=189.00 Aligned_cols=267 Identities=17% Similarity=0.107 Sum_probs=189.1
Q ss_pred CCCCCCCCCcccEEeCCC-----------cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCC
Q 006570 58 NFCYLPSSSSLKIVCTNS-----------RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNL 126 (640)
Q Consensus 58 ~~C~~~~~~~~gv~C~~~-----------~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L 126 (640)
-||..+.....-|.|+.. ..+.|+|..|++ ..+++..|.....|+.||||+|.|+.+-|++|.+|.+|
T Consensus 39 ~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I-~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l 117 (498)
T KOG4237|consen 39 APCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQI-SSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASL 117 (498)
T ss_pred CCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCc-ccCChhhccchhhhceecccccchhhcChHhhhhhHhh
Confidence 456554311223788642 356677777776 34444445556777777777777777777777777777
Q ss_pred cEeeccc-CcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
..|-+.+ |+|+...-..|++|..|+.|.+.-|++.-...+.|..|++|..|.+.+|.+..+... |..+.+++.+.+..
T Consensus 118 ~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~ 197 (498)
T KOG4237|consen 118 LSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQ 197 (498)
T ss_pred hHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhc
Confidence 6666555 666443335677777777777777777755666677777777777777777766664 77777888887777
Q ss_pred CCCCC------------CCCCc-------------------------cccccee---ecccCcccccCC-ccccCCCCcc
Q 006570 205 NDFGP------------KFPSL-------------------------SKNIVSV---ILRNNSLRSEIP-SGLKNFDQLK 243 (640)
Q Consensus 205 N~l~~------------~~~~~-------------------------~~~L~~L---~l~~N~l~~~~p-~~~~~l~~L~ 243 (640)
|.+-- ..|.. ...++.+ ..+.+...+.-| ..|..|++|+
T Consensus 198 np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~ 277 (498)
T KOG4237|consen 198 NPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLR 277 (498)
T ss_pred CccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccce
Confidence 77310 00000 0111111 122222333344 3588999999
Q ss_pred EEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc
Q 006570 244 QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 244 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~ 323 (640)
.|+|++|+|+++-+.+|.++..+++|+|..|+|...-...|.++..|+.|+|.+|+|+-..|..|..+.+|..+++-.|.
T Consensus 278 ~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 278 KLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred EeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCc
Confidence 99999999999999999999999999999999987777889999999999999999999999999999999999998886
Q ss_pred cc
Q 006570 324 LS 325 (640)
Q Consensus 324 l~ 325 (640)
+.
T Consensus 358 ~~ 359 (498)
T KOG4237|consen 358 FN 359 (498)
T ss_pred cc
Confidence 54
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=167.07 Aligned_cols=142 Identities=11% Similarity=0.137 Sum_probs=107.1
Q ss_pred CCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-----CCcccceeeeEEEecccCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-----RHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++..+.||+|+||.||. +++....+||++........+++.+|+++++.+ +||||++++|++... ...
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~-----~g~ 76 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD-----CGT 76 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC-----CCC
Confidence 34568899999999996 433333479988765444567899999999999 579999999988521 111
Q ss_pred Ce-EEEEEEc--cCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHh-hhcccCCCCCeeccCCCCCceeecCC----Cc
Q 006570 528 ST-VFLVLEH--ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV-QFLHTGVAPGIFGNNLKTENILLDKA----LT 599 (640)
Q Consensus 528 ~~-~~lv~Ey--~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~iiHrDlk~~NILl~~~----~~ 599 (640)
.. ..+|+|| +++|+|.+++.+ ..+++. ..++.+++.++ +|||+ .+|+||||||+|||++.. ..
T Consensus 77 g~v~~~I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 77 GYVYDVIADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred eEEEEEEecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCc
Confidence 23 3479999 668999999964 235544 35678888887 99999 699999999999999743 47
Q ss_pred eEEeC-CCCCcc
Q 006570 600 AKLSG-YNIPLP 610 (640)
Q Consensus 600 ~kl~D-fGla~~ 610 (640)
++|+| ||.+..
T Consensus 148 ~~LiDg~G~~~~ 159 (210)
T PRK10345 148 PVVCDNIGESTF 159 (210)
T ss_pred EEEEECCCCcce
Confidence 99999 555444
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.2e-21 Score=166.97 Aligned_cols=161 Identities=27% Similarity=0.405 Sum_probs=128.4
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCe
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEE 199 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~ 199 (640)
+.++++++.|.||+|+++ .+|+.+..|.+|+.|++++|+|. .+|..++.+++|+.|+++-|++.-.+.+|+.++.|+.
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~lev 106 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEV 106 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCccccCCCchhhh
Confidence 556778888999999995 67778999999999999999999 9999999999999999999999988888999999999
Q ss_pred eEccCCCCCC-CCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCc
Q 006570 200 LNLGGNDFGP-KFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQ 275 (640)
Q Consensus 200 L~L~~N~l~~-~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 275 (640)
|||.+|++.. ..|.. +..|+-|+|++|.|. .+|+.++++++|+.|.+..|.+- .+|..++.++.|++|++.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 9999999864 34543 456666777777775 66777777777777777777776 566777777777777777777
Q ss_pred CCccCCcccc
Q 006570 276 LSEALPVNIS 285 (640)
Q Consensus 276 l~~~~p~~~~ 285 (640)
++- +|.+++
T Consensus 185 l~v-lppel~ 193 (264)
T KOG0617|consen 185 LTV-LPPELA 193 (264)
T ss_pred eee-cChhhh
Confidence 753 444444
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-18 Score=194.18 Aligned_cols=206 Identities=22% Similarity=0.223 Sum_probs=147.5
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|+|++|+++.. +.. ...|+.|+|++|.+.. +|..+ ++|+.|+|++|+++ .+|.. +++|++|+|
T Consensus 243 ~Lk~LdLs~N~LtsL-P~l----p~sL~~L~Ls~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdL 309 (788)
T PRK15387 243 ELRTLEVSGNQLTSL-PVL----PPGLLELSIFSNPLTH-LPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSV 309 (788)
T ss_pred CCcEEEecCCccCcc-cCc----ccccceeeccCCchhh-hhhch---hhcCEEECcCCccc-ccccc---ccccceeEC
Confidence 567899999988643 221 2467777777776542 33221 33445555555553 23321 234555555
Q ss_pred ccCcccc-------------------cCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCccc
Q 006570 156 SSNFIYG-------------------EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSK 216 (640)
Q Consensus 156 s~N~l~~-------------------~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 216 (640)
++|+|++ .+|.. ..+|+.|+|++|+|+++++. ..+|+.|++++|+|+. +|..+.
T Consensus 310 S~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~~-LP~l~~ 382 (788)
T PRK15387 310 SDNQLASLPALPSELCKLWAYNNQLTSLPTL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTS-LPALPS 382 (788)
T ss_pred CCCccccCCCCcccccccccccCcccccccc---ccccceEecCCCccCCCCCC---Ccccceehhhcccccc-Cccccc
Confidence 5555542 23321 14799999999999986553 3578899999999985 677778
Q ss_pred ccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 217 NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 217 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 383 ~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 99999999999984 6654 3579999999999985 6654 346889999999997 589999999999999999
Q ss_pred CccCcccCCCCccC
Q 006570 297 HNLLIGKLPSCIGS 310 (640)
Q Consensus 297 ~N~l~~~~p~~~~~ 310 (640)
+|+|++..|..+..
T Consensus 454 ~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 454 GNPLSERTLQALRE 467 (788)
T ss_pred CCCCCchHHHHHHH
Confidence 99999988876643
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-20 Score=166.42 Aligned_cols=161 Identities=25% Similarity=0.388 Sum_probs=142.2
Q ss_pred ccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeec
Q 006570 144 INRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVIL 223 (640)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l 223 (640)
+-++.+.+.|.||+|+++ .+|+.+..+.+|+.|++++|+|+..+++++.+++|+.|+++-|++
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl---------------- 91 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRL---------------- 91 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhh----------------
Confidence 446677888899999998 788889999999999999999999888899999998888888876
Q ss_pred ccCcccccCCccccCCCCccEEEccCCccc-CcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFV-GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
..+|..|+.++.|+.|||++|++. ..+|..|..+..|+.|+|++|.| ..+|..++++++|+.|.+..|.+.
T Consensus 92 ------~~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndf-e~lp~dvg~lt~lqil~lrdndll- 163 (264)
T KOG0617|consen 92 ------NILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDF-EILPPDVGKLTNLQILSLRDNDLL- 163 (264)
T ss_pred ------hcCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCc-ccCChhhhhhcceeEEeeccCchh-
Confidence 368899999999999999999995 45789999999999999999999 568889999999999999999987
Q ss_pred cCCCCccCCCCCceeeeccccccCccC
Q 006570 303 KLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 303 ~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
.+|..++.+..|+.+.+.+|+++-.+|
T Consensus 164 ~lpkeig~lt~lrelhiqgnrl~vlpp 190 (264)
T KOG0617|consen 164 SLPKEIGDLTRLRELHIQGNRLTVLPP 190 (264)
T ss_pred hCcHHHHHHHHHHHHhcccceeeecCh
Confidence 689999999999999999999998765
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-18 Score=161.74 Aligned_cols=174 Identities=16% Similarity=0.234 Sum_probs=136.8
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC-cccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH-RHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~~~~~ 527 (640)
..+|...+.||.|+||.+|.|. ..+|+.||||.-..... ..++..|..+.+.+++ ..|..+..|. .+.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~--------~e~ 83 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYG--------TEK 83 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhc--------ccc
Confidence 4678899999999999999999 77899999998764432 2456778888888865 3444444333 244
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~D 604 (640)
..-.+|||.. +.||+++..-+ ...++..+++..|-|++.-++|+|. .++|||||||+|+|..-+ ..+.++|
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC--~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFC--SRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred ccceeeeecc-CccHHHHHHHH--hhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEe
Confidence 5668999998 77999998754 3458889999999999999999998 799999999999998654 4688999
Q ss_pred CCCCccccCCCCc------------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 605 YNIPLPSKVRNTL------------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 605 fGla~~~~~~~~~------------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
||+|+.+.+..+. +.+ +.+.|+-|.|.+|.+.--|
T Consensus 158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG 217 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRG 217 (341)
T ss_pred ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecC
Confidence 9999876543321 334 8899999999999876544
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-18 Score=174.86 Aligned_cols=177 Identities=20% Similarity=0.258 Sum_probs=139.4
Q ss_pred CCCCCCccccCCccceEEEEeCC--CcEEEEEEeecccCCChHHHHHHHHHHhcCCC----cccceeeeEEEecccCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTD--GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH----RHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~~~~~~~~~~ 525 (640)
+|.+.+.||+|+||.||.+.... ...+|+|............+..|+.++..+.. +++..+++... .
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-------~ 91 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR-------S 91 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc-------C
Confidence 78899999999999999999544 35788888765433322378889999988863 57777776542 1
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-----Cce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-----LTA 600 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-----~~~ 600 (640)
.....|+||+.+ |.+|.++..... ...++..+..+|+.|++.+|+++|+ .+++||||||.|+++... ..+
T Consensus 92 ~~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 92 TEDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred CCceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceE
Confidence 345679999998 669999876533 5779999999999999999999998 799999999999999865 468
Q ss_pred EEeCCCCCc--ccc-CC--------C-C------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPL--PSK-VR--------N-T------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~--~~~-~~--------~-~------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+.|||+++ ... .. . . . +.. +.+.|+||++.++.|+..|.
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 999999998 310 00 0 0 0 334 89999999999999999873
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-17 Score=198.78 Aligned_cols=238 Identities=19% Similarity=0.163 Sum_probs=153.7
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.+..|++.++.+. .++ ..+...+|..|+|++|.+. .++..+..+++|+.|+|++|...+.+|. ++.+++|++|+|
T Consensus 590 ~Lr~L~~~~~~l~-~lP--~~f~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L 664 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMP--SNFRPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKL 664 (1153)
T ss_pred ccEEEEecCCCCC-CCC--CcCCccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEe
Confidence 4677777776652 221 1234567888888887764 4566677888888888887765567774 778888888888
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCcc
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSG 235 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~ 235 (640)
++|.....+|..+.++++|+.|++++|..-+.+|...++++|+.|+|++|...+.+|....+|+.|++++|.+. .+|..
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~ 743 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSN 743 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-ccccc
Confidence 88776668888888888888888888654444444336778888888877666666666666777777776664 34432
Q ss_pred c------------------------------cCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 236 L------------------------------KNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 236 ~------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
+ ...++|+.|+|++|...+.+|..++++++|+.|+|++|...+.+|..+
T Consensus 744 ~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~- 822 (1153)
T PLN03210 744 LRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI- 822 (1153)
T ss_pred ccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-
Confidence 1 012356666666666666666667777777777776654334455443
Q ss_pred CCCCCCEEecc---------------------CccCcccCCCCccCCCCCceeeecc
Q 006570 286 CSAKLNFVEIS---------------------HNLLIGKLPSCIGSNSLNRTVVSTW 321 (640)
Q Consensus 286 ~~~~L~~L~ls---------------------~N~l~~~~p~~~~~~~~l~~l~l~~ 321 (640)
++++|+.|+++ +|.++ .+|.++..+++|+.|++++
T Consensus 823 ~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 823 NLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CccccCEEECCCCCccccccccccccCEeECCCCCCc-cChHHHhcCCCCCEEECCC
Confidence 34445555554 44444 3455555555555555554
|
syringae 6; Provisional |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.2e-18 Score=167.13 Aligned_cols=145 Identities=13% Similarity=0.086 Sum_probs=112.4
Q ss_pred CCCCCCccccCCccceEEEE--eCCCcEEEEEEeecccCC------------------------ChHHHHHHHHHHhcCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKLKQRH------------------------LPQSLMQHVELLSKLR 505 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 505 (640)
.|.+.+.||+|+||.||+|+ ..+|+.||+|+++..... ....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 568999999998753210 0123568999999997
Q ss_pred Ccc--cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC-e
Q 006570 506 HRH--LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG-I 582 (640)
Q Consensus 506 h~n--iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-i 582 (640)
+.. +.+++++. ..++||||+++++|..+... .......+...++.|++.+++|||+ .+ |
T Consensus 109 ~~~i~~p~~~~~~------------~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~g~i 170 (237)
T smart00090 109 EAGVPVPKPIAWR------------RNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYK---EGEL 170 (237)
T ss_pred hcCCCCCeeeEec------------CceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHh---cCCE
Confidence 532 33444321 14899999999888766522 2345566678999999999999998 68 9
Q ss_pred eccCCCCCceeecCCCceEEeCCCCCccccCCC
Q 006570 583 FGNNLKTENILLDKALTAKLSGYNIPLPSKVRN 615 (640)
Q Consensus 583 iHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~ 615 (640)
+||||||+||+++ ++.++|+|||.+.......
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~ 202 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVELDHPM 202 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhccCCcc
Confidence 9999999999999 8899999999998665443
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-17 Score=195.35 Aligned_cols=215 Identities=19% Similarity=0.169 Sum_probs=174.7
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..|+.|++.++.+ ..+|..| ...+|+.|+|.+|.+ ..+|..+..+++|++|+|++|...+.+| .++.+++|+.|+|
T Consensus 589 ~~Lr~L~~~~~~l-~~lP~~f-~~~~L~~L~L~~s~l-~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPL-RCMPSNF-RPENLVKLQMQGSKL-EKLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCC-CCCCCcC-CccCCcEEECcCccc-cccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEe
Confidence 4688899988765 5566666 579999999999998 4688889999999999999987666888 4889999999999
Q ss_pred cCccCCccCC-CccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcC
Q 006570 180 ADNLLNGSVP-DLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (640)
Q Consensus 180 ~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 256 (640)
++|.....+| .+.++++|+.|++++|.....+|.. +++|+.|++++|...+.+|.. ..+|+.|+|++|.+. .+
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~l 740 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EF 740 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cc
Confidence 9987555555 4999999999999998655666653 789999999999877677754 457899999999987 44
Q ss_pred Cccc------------------------------cCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCC
Q 006570 257 QSFL------------------------------FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306 (640)
Q Consensus 257 p~~~------------------------------~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~ 306 (640)
|..+ ...++|+.|+|++|...+.+|..++++++|+.|++++|...+.+|.
T Consensus 741 P~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~ 820 (1153)
T PLN03210 741 PSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPT 820 (1153)
T ss_pred cccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCC
Confidence 5432 1135788999999988888999999999999999999876667887
Q ss_pred CccCCCCCceeeecccc
Q 006570 307 CIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 307 ~~~~~~~l~~l~l~~N~ 323 (640)
.+ ++++|+.|+++++.
T Consensus 821 ~~-~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 821 GI-NLESLESLDLSGCS 836 (1153)
T ss_pred CC-CccccCEEECCCCC
Confidence 66 67788888887754
|
syringae 6; Provisional |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.7e-18 Score=163.37 Aligned_cols=173 Identities=16% Similarity=0.204 Sum_probs=140.5
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
-+|.+.++||+|+||+++.|+ +-+++.||||.-...+ ...++..|.+..+.+. .++|..++-+- +++.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFG--------qeG~ 97 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFG--------QEGK 97 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeec--------cccc
Confidence 468889999999999999999 7789999999765332 2356777888877774 67777765322 3566
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-----CceEEe
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-----LTAKLS 603 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-----~~~kl~ 603 (640)
+-.||+|.. |.||+|+..-+ ...++..++..||.|++.-++|+|+ ..+|.|||||+|+||..- ..+.++
T Consensus 98 ~NiLVidLL-GPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 98 YNILVIDLL-GPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhhhhh-CcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEE
Confidence 678999998 77999887643 4468999999999999999999999 799999999999999643 468999
Q ss_pred CCCCCccccCCCCc------------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 604 GYNIPLPSKVRNTL------------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 604 DfGla~~~~~~~~~------------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+|+.+.+..+. +++ +.+.|.-|+|-|+++.+-|
T Consensus 172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRG 232 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 232 (449)
T ss_pred eccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccC
Confidence 99999988654432 556 9999999999999988876
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.7e-18 Score=157.97 Aligned_cols=159 Identities=13% Similarity=0.033 Sum_probs=122.2
Q ss_pred CCCccccCCccceEEEEeCCCcEEEEEEeecccCC----ChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCe
Q 006570 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH----LPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
....|++|+||+||.+.- ++..++.+.+.....- ....+.+|+++|++++ |+++++++++. .
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------------~ 72 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------------G 72 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------------C
Confidence 457899999999997766 5778887777644321 1125789999999995 58899988752 1
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC-CCCceeecCCCceEEeCCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL-KTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl-k~~NILl~~~~~~kl~DfGla 608 (640)
.+++|||+++.+|.+.+.. ....++.+++++++|+|+ .+|+|||| ||+|||+++++.++|+|||+|
T Consensus 73 ~~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A 139 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLA 139 (218)
T ss_pred EEEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCc
Confidence 5999999999998754421 113577899999999999 79999999 799999999999999999999
Q ss_pred ccccCCCC-------c-------------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 609 LPSKVRNT-------L-------------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 609 ~~~~~~~~-------~-------------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
........ . ... -.+.+.++-|+-+|.++|+
T Consensus 140 ~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~ 203 (218)
T PRK12274 140 VRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTR 203 (218)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhc
Confidence 85543321 0 112 2456888999999999986
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=159.35 Aligned_cols=144 Identities=16% Similarity=0.148 Sum_probs=110.8
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC----------------------ChHHHHHHHHHHh
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH----------------------LPQSLMQHVELLS 502 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 502 (640)
++......|...+.||+|+||.||++...+|+.||||++...... ......+|...+.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344333447788999999999999999888999999987643210 1123667888898
Q ss_pred cCCCcc--cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCC
Q 006570 503 KLRHRH--LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (640)
Q Consensus 503 ~l~h~n--iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 580 (640)
.+.|++ +...++. ...++||||+++++|.+.... .....++.+++.++.++|+ .
T Consensus 89 ~l~~~~i~v~~~~~~------------~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~---~ 144 (198)
T cd05144 89 ALYEEGFPVPKPIDW------------NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYK---H 144 (198)
T ss_pred HHHHcCCCCCceeec------------CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHH---C
Confidence 887774 4444331 125899999999999765420 2346788999999999998 7
Q ss_pred CeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 581 ~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
+|+||||||+||++++++.++|+|||.+....
T Consensus 145 gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 145 GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999999996543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-19 Score=196.21 Aligned_cols=218 Identities=24% Similarity=0.279 Sum_probs=152.3
Q ss_pred CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 99 ~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
...+++++++.|.+.+. |..+..+.+|+.|+..+|.| ..+|..+....+|+.|++.+|.+. -+|+....++.|++|+
T Consensus 240 p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l-~~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRL-VALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhhcc-hHHHHhcccceEecccchhH-HhhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 35677778887776543 47778888888888888888 567777777888888888888887 7777777788888888
Q ss_pred ccCccCCccCCC-c-------------------------cCcCcCCeeEccCCCCCCCC-CCc--ccccceeecccCccc
Q 006570 179 LADNLLNGSVPD-L-------------------------QRLVLLEELNLGGNDFGPKF-PSL--SKNIVSVILRNNSLR 229 (640)
Q Consensus 179 L~~N~l~~~~~~-~-------------------------~~l~~L~~L~L~~N~l~~~~-~~~--~~~L~~L~l~~N~l~ 229 (640)
|..|+|...++. + ..++.|+.|+|.+|+|+... |.. +++|+.|+|++|+|.
T Consensus 317 L~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~ 396 (1081)
T KOG0618|consen 317 LQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN 396 (1081)
T ss_pred ehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc
Confidence 888887765552 1 12234666666666666543 322 567777777777776
Q ss_pred ccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCccc-CCCCc
Q 006570 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGK-LPSCI 308 (640)
Q Consensus 230 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~-~p~~~ 308 (640)
......+.++..|++|+||+|+|+ .+|..+.+++.|+.|...+|++. ..| .+.+++.|+.+|+|.|+|+.. +|...
T Consensus 397 ~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~ 473 (1081)
T KOG0618|consen 397 SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL 473 (1081)
T ss_pred cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhC
Confidence 433345667777777777777777 56677777777777777777775 366 677788888888888887643 34333
Q ss_pred cCCCCCceeeecccc
Q 006570 309 GSNSLNRTVVSTWNC 323 (640)
Q Consensus 309 ~~~~~l~~l~l~~N~ 323 (640)
. .++|++||+++|.
T Consensus 474 p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 474 P-SPNLKYLDLSGNT 487 (1081)
T ss_pred C-CcccceeeccCCc
Confidence 2 2678888888875
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-17 Score=158.46 Aligned_cols=135 Identities=20% Similarity=0.259 Sum_probs=110.7
Q ss_pred CccccCCccceEEEEeCCCcEEEEEEeecccCC--------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+.||+|++|.||+|+. +|..|++|........ ....+.+|++++..++|+++.....++.. ..
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------~~ 72 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--------PE 72 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe--------CC
Confidence 5799999999999987 5778999986543211 12457889999999999998877766542 23
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++++|.+++... .+ .+..++.+++.+|.++|+ .+++|||++|+||+++ ++.++|+|||.+
T Consensus 73 ~~~lv~e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 73 NFIIVMEYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred CCEEEEEEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcc
Confidence 468999999999999998531 12 788999999999999998 7999999999999999 788999999998
Q ss_pred ccc
Q 006570 609 LPS 611 (640)
Q Consensus 609 ~~~ 611 (640)
...
T Consensus 142 ~~~ 144 (211)
T PRK14879 142 EFS 144 (211)
T ss_pred cCC
Confidence 764
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-19 Score=177.90 Aligned_cols=257 Identities=18% Similarity=0.101 Sum_probs=197.5
Q ss_pred cEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCC
Q 006570 69 KIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFW 148 (640)
Q Consensus 69 gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 148 (640)
+++|++..=..++-++.+++..+...| .....++|..|.|+...|.+|+.+++|+.|||++|+|+-+-|++|..|.
T Consensus 40 pC~Cs~~~g~~VdCr~~GL~eVP~~LP----~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~ 115 (498)
T KOG4237|consen 40 PCTCSDVEGGIVDCRGKGLTEVPANLP----PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLA 115 (498)
T ss_pred CcccCCCCCceEEccCCCcccCcccCC----CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhH
Confidence 488977434456777777754443333 4677889999999999999999999999999999999988999999999
Q ss_pred CCCEEEccc-CcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCC---cccccceeec
Q 006570 149 SLEVLNISS-NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS---LSKNIVSVIL 223 (640)
Q Consensus 149 ~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~---~~~~L~~L~l 223 (640)
+|..|-+-+ |+|+...-..|++|..|+.|.+.-|++.-+... |..|++|..|.|.+|.+....-. .+..++.+.+
T Consensus 116 ~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhl 195 (498)
T KOG4237|consen 116 SLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHL 195 (498)
T ss_pred hhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhh
Confidence 988876666 999944445699999999999999999988887 99999999999999988543332 2456666777
Q ss_pred ccCcc------------cccCCccccCCCCccEEEccCCcc-------------------------cCcCC-ccccCCCC
Q 006570 224 RNNSL------------RSEIPSGLKNFDQLKQFDISSNNF-------------------------VGPIQ-SFLFSLPS 265 (640)
Q Consensus 224 ~~N~l------------~~~~p~~~~~l~~L~~L~Ls~N~l-------------------------~~~~p-~~~~~l~~ 265 (640)
..|.+ .-..|.+++......-..|.++++ -+.-| ..|..+++
T Consensus 196 A~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~ 275 (498)
T KOG4237|consen 196 AQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPN 275 (498)
T ss_pred hcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhccc
Confidence 66662 122233333333222222222222 12222 45788999
Q ss_pred CcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 266 ILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 266 L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
|+.|+|++|+|+++-+.+|..+..++.|.|..|+|...--..|.+++.|+.|++.+|+++-..|
T Consensus 276 L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 276 LRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred ceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 9999999999999999999999999999999999987667778999999999999999997654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.7e-18 Score=196.23 Aligned_cols=130 Identities=16% Similarity=0.176 Sum_probs=98.3
Q ss_pred cCCC-cccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC
Q 006570 503 KLRH-RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG 581 (640)
Q Consensus 503 ~l~h-~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 581 (640)
.++| +||.++++++.....+. .....++.++||+ +++|.++++. ....+++.+++.|+.||++||+|||+ .+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDG-LDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHS---QG 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccc-cccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence 4455 68888888763322222 1234578889988 5599999964 34568999999999999999999998 79
Q ss_pred eeccCCCCCceeec-------------------CCCceEEeCCCCCccccCC------------------------CC--
Q 006570 582 IFGNNLKTENILLD-------------------KALTAKLSGYNIPLPSKVR------------------------NT-- 616 (640)
Q Consensus 582 iiHrDlk~~NILl~-------------------~~~~~kl~DfGla~~~~~~------------------------~~-- 616 (640)
|+||||||+|||++ .++.+|++|||+++..... .+
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 99999999999994 3566788888887642110 00
Q ss_pred c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 617 L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 617 ~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+ +.. +.++|||||||+||||++|
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 1 333 8999999999999999986
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.3e-19 Score=182.64 Aligned_cols=225 Identities=22% Similarity=0.203 Sum_probs=113.0
Q ss_pred ccccccCccCCCC----hhhhhhcCCCCCcEeecccCcCcC------CCCccccCCCCCCEEEcccCcccccCCccccCC
Q 006570 102 ASQQSLSANFNID----RFFTILTKLSNLKVLSLVSLGLWG------PLPSKINRFWSLEVLNISSNFIYGEIPMEITSL 171 (640)
Q Consensus 102 l~~l~l~~n~~~~----~~~~~l~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 171 (640)
++.++++++.+.+ .++..+...+.|+.|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+
T Consensus 25 L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l 104 (319)
T cd00116 25 LQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESL 104 (319)
T ss_pred ccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHH
Confidence 4444555444422 134445555556666666655531 123344555566666666666654444444444
Q ss_pred CC---CCEEEccCccCCccC----C-CccCc-CcCCeeEccCCCCCCCCCC----c---ccccceeecccCcccc----c
Q 006570 172 KN---LKSIVLADNLLNGSV----P-DLQRL-VLLEELNLGGNDFGPKFPS----L---SKNIVSVILRNNSLRS----E 231 (640)
Q Consensus 172 ~~---L~~L~L~~N~l~~~~----~-~~~~l-~~L~~L~L~~N~l~~~~~~----~---~~~L~~L~l~~N~l~~----~ 231 (640)
.+ |+.|++++|++++.. . .+..+ ++|+.|+|++|.+++.... . .++|+.|++++|.+++ .
T Consensus 105 ~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 184 (319)
T cd00116 105 LRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRA 184 (319)
T ss_pred hccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHH
Confidence 33 666666666655211 1 13344 5566666666666532211 1 2356666666666653 1
Q ss_pred CCccccCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCccCCcccc-----CCCCCCEEeccCccCc-
Q 006570 232 IPSGLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEALPVNIS-----CSAKLNFVEISHNLLI- 301 (640)
Q Consensus 232 ~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~L~~L~ls~N~l~- 301 (640)
++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|++++.....+. ..++|+.|++++|.++
T Consensus 185 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~ 264 (319)
T cd00116 185 LAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITD 264 (319)
T ss_pred HHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCc
Confidence 223344445666666666666532 223344556666666666666542221111 1256666666666664
Q ss_pred ---ccCCCCccCCCCCceeeeccccccC
Q 006570 302 ---GKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 302 ---~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..++..+...+.++.+++++|.++.
T Consensus 265 ~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 265 DGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 1222334444566666666666654
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.1e-17 Score=178.08 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=109.7
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEE-eecccC-------CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~-~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
...|...+.||+|+||+||+|.+.... +++|+ ...... ...+++.+|+++++.++|++++....++..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--- 407 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--- 407 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe---
Confidence 344566899999999999999975443 44443 221111 112568899999999999999887766642
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
....++||||+++++|.+++. ....++.+++++|.|||+ .+++|||+||+||++ +++.++
T Consensus 408 -----~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~ 467 (535)
T PRK09605 408 -----PEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLY 467 (535)
T ss_pred -----CCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEE
Confidence 223689999999999999884 357789999999999999 799999999999999 678999
Q ss_pred EeCCCCCcccc
Q 006570 602 LSGYNIPLPSK 612 (640)
Q Consensus 602 l~DfGla~~~~ 612 (640)
|+|||+++...
T Consensus 468 liDFGla~~~~ 478 (535)
T PRK09605 468 LIDFGLGKYSD 478 (535)
T ss_pred EEeCcccccCC
Confidence 99999998754
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=154.22 Aligned_cols=132 Identities=22% Similarity=0.237 Sum_probs=104.4
Q ss_pred ccccCCccceEEEEeCCCcEEEEEEeecccCC--------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 458 LIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.||+|+||.||+|.+ ++..|++|........ ..+++.+|++++..++|+++.....++.. ...
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------~~~ 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD--------PDN 71 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE--------CCC
Confidence 489999999999996 5788999986532211 12457789999999998876555444431 223
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++++|.+++... . . .++.+++++|.++|+ .+++|||++|+||+++ ++.+++.|||+++
T Consensus 72 ~~lv~e~~~g~~l~~~~~~~---~---~----~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEEG---N---D----ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CEEEEEEECCccHHHHHhhc---H---H----HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 58999999999999988531 1 0 789999999999998 7999999999999999 8899999999987
Q ss_pred ccc
Q 006570 610 PSK 612 (640)
Q Consensus 610 ~~~ 612 (640)
...
T Consensus 138 ~~~ 140 (199)
T TIGR03724 138 YSD 140 (199)
T ss_pred CCC
Confidence 653
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-18 Score=189.48 Aligned_cols=215 Identities=24% Similarity=0.300 Sum_probs=172.0
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccc-----------
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI----------- 168 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------- 168 (640)
.+++.++..+|.+ ..+|..+...++|+.|+..+|.+ ..+|+....++.|++|||..|+|. .+|+.+
T Consensus 264 ~nle~l~~n~N~l-~~lp~ri~~~~~L~~l~~~~nel-~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~l 340 (1081)
T KOG0618|consen 264 ANLEALNANHNRL-VALPLRISRITSLVSLSAAYNEL-EYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTL 340 (1081)
T ss_pred ccceEecccchhH-HhhHHHHhhhhhHHHHHhhhhhh-hhCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHH
Confidence 6778888888888 67888899999999999999999 567888888999999999999998 666432
Q ss_pred ---------------cCCCCCCEEEccCccCCcc-CCCccCcCcCCeeEccCCCCCCCCCCc----ccccceeecccCcc
Q 006570 169 ---------------TSLKNLKSIVLADNLLNGS-VPDLQRLVLLEELNLGGNDFGPKFPSL----SKNIVSVILRNNSL 228 (640)
Q Consensus 169 ---------------~~l~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~~N~l 228 (640)
..++.|+.|++.+|+|+.. +|-+.+..+|+.|+|++|+|.. +|+. +..|+.|+||+|+|
T Consensus 341 n~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~-fpas~~~kle~LeeL~LSGNkL 419 (1081)
T KOG0618|consen 341 NVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNS-FPASKLRKLEELEELNLSGNKL 419 (1081)
T ss_pred hhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccccc-CCHHHHhchHHhHHHhcccchh
Confidence 1244578899999999875 5669999999999999999954 4543 67889999999999
Q ss_pred cccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc-CCccccCCCCCCEEeccCccCcccCCCC
Q 006570 229 RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA-LPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
+ .+|..+.++..|++|...+|+|. ..| .+..++.|+.+|++.|+|+.. +|.... -++|++||+++|.=.-.--..
T Consensus 420 ~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~l~~d~~~ 495 (1081)
T KOG0618|consen 420 T-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTRLVFDHKT 495 (1081)
T ss_pred h-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCcccccchhh
Confidence 8 78999999999999999999998 677 799999999999999999864 343332 389999999999632122233
Q ss_pred ccCCCCCceeeeccc
Q 006570 308 IGSNSLNRTVVSTWN 322 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N 322 (640)
|..++.+...+..-|
T Consensus 496 l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 496 LKVLKSLSQMDITLN 510 (1081)
T ss_pred hHHhhhhhheecccC
Confidence 445555555555544
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.5e-16 Score=159.78 Aligned_cols=175 Identities=22% Similarity=0.368 Sum_probs=142.6
Q ss_pred CCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCc-ccceeeeEEEecccCCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHR-HLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~~~~~~~~~ 528 (640)
|...+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+++. ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--------~~~ 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ--------DEG 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe--------cCC
Confidence 556788999999999999976 78999999765432 367899999999999988 7999998873 223
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGl 607 (640)
..++++||+.++++.+++........+.......+..+++.++.|+|. .+++|||+||+||+++... .++++|||.
T Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 379999999999999777542111268899999999999999999999 6899999999999999998 799999999
Q ss_pred CccccCCC---------Cc--------------c---CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN---------TL--------------S---FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~---------~~--------------~---~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... .. . .. ....|+||+|++++++++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~ 208 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGL 208 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCC
Confidence 87443211 00 2 34 88999999999999988873
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-18 Score=177.01 Aligned_cols=247 Identities=21% Similarity=0.189 Sum_probs=180.8
Q ss_pred EEEEEecCCCCCCCCC-CC--CcCCCccccccccCccCCC------ChhhhhhcCCCCCcEeecccCcCcCCCCccccCC
Q 006570 77 VTELTVIGNKSSPAHS-PK--PTFGKFSASQQSLSANFNI------DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRF 147 (640)
Q Consensus 77 v~~l~l~~~~~~~~~~-~~--~~~~~~~l~~l~l~~n~~~------~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 147 (640)
++.|+++++.++.... .. .....+.+++++++++.+. ..++..+..+++|+.|+|++|.+.+..+..+..+
T Consensus 25 L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l 104 (319)
T cd00116 25 LQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESL 104 (319)
T ss_pred ccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHH
Confidence 7778888776632110 00 0112345788888887765 2345678889999999999999987777777666
Q ss_pred CC---CCEEEcccCcccc----cCCccccCC-CCCCEEEccCccCCccCC-----CccCcCcCCeeEccCCCCCCCC---
Q 006570 148 WS---LEVLNISSNFIYG----EIPMEITSL-KNLKSIVLADNLLNGSVP-----DLQRLVLLEELNLGGNDFGPKF--- 211 (640)
Q Consensus 148 ~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~L~~N~l~~~~--- 211 (640)
.+ |++|++++|.+++ .+...+..+ ++|+.|+|++|.+++... .+..+.+|++|+|++|.+++..
T Consensus 105 ~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 184 (319)
T cd00116 105 LRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRA 184 (319)
T ss_pred hccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHH
Confidence 66 9999999999983 344456677 899999999999995322 2667789999999999998532
Q ss_pred -CCc---ccccceeecccCccccc----CCccccCCCCccEEEccCCcccCcCCcccc-----CCCCCcEEEccCCcCCc
Q 006570 212 -PSL---SKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNFVGPIQSFLF-----SLPSILYLNLAGNQLSE 278 (640)
Q Consensus 212 -~~~---~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~ 278 (640)
+.. .++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.....+. ..+.|+.|++++|.++.
T Consensus 185 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~ 264 (319)
T cd00116 185 LAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITD 264 (319)
T ss_pred HHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCc
Confidence 222 35999999999999743 345567789999999999999864333332 23799999999999972
Q ss_pred ----cCCccccCCCCCCEEeccCccCccc----CCCCccCC-CCCceeeecccc
Q 006570 279 ----ALPVNISCSAKLNFVEISHNLLIGK----LPSCIGSN-SLNRTVVSTWNC 323 (640)
Q Consensus 279 ----~~p~~~~~~~~L~~L~ls~N~l~~~----~p~~~~~~-~~l~~l~l~~N~ 323 (640)
.+...+..+++|+++++++|.++.. +...+... +.++.+++..|.
T Consensus 265 ~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 265 DGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 3445566778999999999999854 34344444 677778777764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.7e-17 Score=154.22 Aligned_cols=173 Identities=18% Similarity=0.374 Sum_probs=132.9
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
..+|.+...|+.|+|+++ |..+++|+++... ....++|..|.-.|+-+.||||+.++|.|- ......+|
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn--------sppnlv~i 265 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN--------SPPNLVII 265 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc--------CCCCceEe
Confidence 456888999999999996 5566778876543 334578999999999999999999999994 33457899
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe--CCCCCccc
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPS 611 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~--DfGla~~~ 611 (640)
..||+.|+|+..+++ ......+..+..+++.++|+|++|||+- .+-|.--.+.++.|++|++.++||+ |--++-..
T Consensus 266 sq~mp~gslynvlhe-~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHE-QTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred eeeccchHHHHHHhc-CccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 999999999999997 3455678889999999999999999984 2344455789999999999999886 32222111
Q ss_pred cCCCCc-------------cCC-CCccceehhhHHHHHHhhc
Q 006570 612 KVRNTL-------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 612 ~~~~~~-------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
....+. ... -..+|+|||.|++||+.|.
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~tr 385 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTR 385 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcc
Confidence 000000 122 6789999999999999874
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=170.66 Aligned_cols=156 Identities=24% Similarity=0.326 Sum_probs=101.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCcccccccc
Q 006570 28 QLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSL 107 (640)
Q Consensus 28 ~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l 107 (640)
...+.|..||+++|+.+.++.. .+|+ .++|.....+|.||.|+....+ +...++.|+|
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~-~~W~--g~~C~p~~~~w~Gv~C~~~~~~-------------------~~~~v~~L~L 425 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR-FGWN--GDPCVPQQHPWSGADCQFDSTK-------------------GKWFIDGLGL 425 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc-CCCC--CCCCCCcccccccceeeccCCC-------------------CceEEEEEEC
Confidence 4467899999999999976543 4785 3667422224569999521100 0001233344
Q ss_pred CccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCcc
Q 006570 108 SANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGS 187 (640)
Q Consensus 108 ~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 187 (640)
++|.+.+.+|..++.|++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|+.+++|++|+.|+|++|+++|.
T Consensus 426 ~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~ 505 (623)
T PLN03150 426 DNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGR 505 (623)
T ss_pred CCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCccccc
Confidence 44444555666777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCC-ccCc-CcCCeeEccCC
Q 006570 188 VPD-LQRL-VLLEELNLGGN 205 (640)
Q Consensus 188 ~~~-~~~l-~~L~~L~L~~N 205 (640)
+|. +..+ .++..+++++|
T Consensus 506 iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 506 VPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred CChHHhhccccCceEEecCC
Confidence 765 4332 34444555444
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-15 Score=144.41 Aligned_cols=138 Identities=18% Similarity=0.206 Sum_probs=97.5
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCC--hHH----------------------HHHHHHHHhcCCCcc--c
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL--PQS----------------------LMQHVELLSKLRHRH--L 509 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--i 509 (640)
.+.||+|+||+||+|+..+++.||||+++...... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998789999999987532211 111 134555555554332 3
Q ss_pred ceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHH-hhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY-LTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 510 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
.+.+++ ...++||||+++|++... +.... .. .....++.+++.++.++|.+ .+|+|||||
T Consensus 82 ~~~~~~------------~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~ 142 (187)
T cd05119 82 PKPIDL------------NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYRE--AGLVHGDLS 142 (187)
T ss_pred CceEec------------CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCC
Confidence 333322 125899999999654321 21100 11 56788999999999999974 599999999
Q ss_pred CCceeecCCCceEEeCCCCCccccC
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
|+||+++ ++.++++|||.+.....
T Consensus 143 p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 143 EYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred hhhEEEE-CCcEEEEECcccccccC
Confidence 9999999 89999999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.5e-15 Score=134.67 Aligned_cols=136 Identities=15% Similarity=0.141 Sum_probs=110.9
Q ss_pred CCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC--cccceeeeEEEecccCCCCCCCeEEE
Q 006570 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH--RHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|++.+..++| .++.+++++.. .++..++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~--------~~~~~~~ 70 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGE--------SDGWSYL 70 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcC--------CCCccEE
Confidence 35679999999999999754 7899999865432 5678999999999976 48888877653 2245799
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+|||++++++..+ +......++.+++++++++|.....+++|+|++|+||++++.+.+++.|||.++..
T Consensus 71 v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 71 LMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred EEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 9999998766543 55677888999999999999854457999999999999999899999999998753
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-14 Score=141.65 Aligned_cols=141 Identities=15% Similarity=0.146 Sum_probs=107.3
Q ss_pred CCccc-cCCccceEEEEeCCCcEEEEEEeeccc-------------CCChHHHHHHHHHHhcCCCccc--ceeeeEEEec
Q 006570 456 TNLIG-EGSQGQLYKGFLTDGSRVSVKCLKLKQ-------------RHLPQSLMQHVELLSKLRHRHL--VSILGHCILT 519 (640)
Q Consensus 456 ~~~ig-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~g~~~~~ 519 (640)
...|| .|+.|+||+++.. +..++||++.... ......+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46787 8999999999875 6789999885321 1123567889999999998875 6777765321
Q ss_pred ccCCCCCCCeEEEEEEccCC-CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 520 YQDHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
. ......++||||+++ .+|.+++.. ..++.. .+.+++.++.+||+ .+|+||||||+|||++.++
T Consensus 115 ~----~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 H----GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDG 179 (239)
T ss_pred c----CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCC
Confidence 1 011123699999997 699998853 234433 35789999999999 7999999999999999999
Q ss_pred ceEEeCCCCCcccc
Q 006570 599 TAKLSGYNIPLPSK 612 (640)
Q Consensus 599 ~~kl~DfGla~~~~ 612 (640)
.++|+|||.+....
T Consensus 180 ~v~LIDfg~~~~~~ 193 (239)
T PRK01723 180 KFWLIDFDRGELRT 193 (239)
T ss_pred CEEEEECCCcccCC
Confidence 99999999998765
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4e-15 Score=167.64 Aligned_cols=179 Identities=22% Similarity=0.297 Sum_probs=133.0
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC---CcccceeeeEEEeccc
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR---HRHLVSILGHCILTYQ 521 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~ 521 (640)
+.+.....|.+.+.||+|+||+||+|...+|+.||+|.-+....- +|.--.+++.+++ -+-|..+..... ++
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~--~~ 766 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHV--FQ 766 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHc--cC
Confidence 334455678889999999999999999888999999987654321 1222223344444 122233322222 11
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-----
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK----- 596 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~----- 596 (640)
+.-++|+||.+.|+|.+++. ..+.++|.-.+.+..|+++-++.||. .+|||+||||+|.+|..
T Consensus 767 ------~~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~ 834 (974)
T KOG1166|consen 767 ------NASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICAD 834 (974)
T ss_pred ------CcceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCC
Confidence 22589999999999999996 46678999999999999999999999 79999999999999932
Q ss_pred --CCceEEeCCCCCccccC--CCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 597 --ALTAKLSGYNIPLPSKV--RNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 597 --~~~~kl~DfGla~~~~~--~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...++|+|||-+-.+.. ..+. ++. +.++|.|.+.-+++-|+.|.
T Consensus 835 ~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 835 SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 34689999999854421 1111 555 99999999999999999884
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-14 Score=161.41 Aligned_cols=106 Identities=25% Similarity=0.390 Sum_probs=95.0
Q ss_pred cceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccC
Q 006570 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (640)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~ 297 (640)
++.|+|++|.++|.+|..++++++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCccCC-CCCceeeecccc
Q 006570 298 NLLIGKLPSCIGSN-SLNRTVVSTWNC 323 (640)
Q Consensus 298 N~l~~~~p~~~~~~-~~l~~l~l~~N~ 323 (640)
|+++|.+|..++.. .++..+++.+|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCc
Confidence 99999999888764 355677777775
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.6e-15 Score=156.47 Aligned_cols=168 Identities=19% Similarity=0.220 Sum_probs=134.5
Q ss_pred cccCCccceEEEE----eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCeEE
Q 006570 459 IGEGSQGQLYKGF----LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 459 ig~G~~g~Vy~~~----~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+|+|+||.|+.++ ...|.-+|+|.+++... ........|..++..++ ||.++++.-.+ +.....+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf--------qt~~kl~ 73 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF--------QTDGKLY 73 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee--------ccccchh
Confidence 6899999999876 23467799998875432 12225566788888887 99999987443 3556689
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
++++|..+|+|...+. ....++......+...++-|++++|+ .+|+|||+|++||+++.+|.+|+.|||+++..
T Consensus 74 l~ld~~rgg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 74 LILDFLRGGDLFTRLS---KEVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEA 147 (612)
T ss_pred Hhhhhcccchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHh
Confidence 9999999999988875 35567788888888999999999999 79999999999999999999999999999875
Q ss_pred cCCC-C---c--------cCCCCccceehhhHHHHHHhhcC
Q 006570 612 KVRN-T---L--------SFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 612 ~~~~-~---~--------~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
-... . . .+....+|.||||++++||+||+
T Consensus 148 v~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~ 188 (612)
T KOG0603|consen 148 VKEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGT 188 (612)
T ss_pred HhhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCC
Confidence 3221 1 1 33488999999999999999995
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=3e-14 Score=134.34 Aligned_cols=88 Identities=20% Similarity=0.142 Sum_probs=73.5
Q ss_pred CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc--
Q 006570 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-- 617 (640)
Q Consensus 540 GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-- 617 (640)
|+|.++++. ....++|.+++.|+.|++.||+|||+. + ||+||+++.++.+|+ ||+++........
T Consensus 1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~ 67 (176)
T smart00750 1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVD 67 (176)
T ss_pred CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccCCCc
Confidence 799999974 245699999999999999999999983 3 999999999999999 9998765332111
Q ss_pred ----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 618 ----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 618 ----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.. +.++|||||||++|||+||.
T Consensus 68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 101 (176)
T smart00750 68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYE 101 (176)
T ss_pred ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCC
Confidence 333 88999999999999999984
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.6e-16 Score=159.26 Aligned_cols=174 Identities=24% Similarity=0.335 Sum_probs=114.3
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCee
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEEL 200 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 200 (640)
..|+.-...||+.|++ .++|..+..+..|+.|.|..|.|. .+|..++++..|++|||+.|+++..++.+..|+ |+.|
T Consensus 72 ~~ltdt~~aDlsrNR~-~elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRF-SELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVL 148 (722)
T ss_pred ccccchhhhhcccccc-ccCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeE
Confidence 4556666677777777 467777777777777777777777 777777777777777777777777776665553 6667
Q ss_pred EccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 201 NLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 201 ~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
-+++|+++-..+.. ...|..|+.+.|.+. .+|..++.+.+|+.|.+..|++. .+|..+..| .|..||++.|+++.
T Consensus 149 i~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~ 225 (722)
T KOG0532|consen 149 IVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISY 225 (722)
T ss_pred EEecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceee
Confidence 77777765443333 455666666666665 45666666666666666666665 345555544 35666666666643
Q ss_pred cCCccccCCCCCCEEeccCccCc
Q 006570 279 ALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 279 ~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
+|-.|..++.|++|-|.+|.|.
T Consensus 226 -iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 226 -LPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred -cchhhhhhhhheeeeeccCCCC
Confidence 6666666666666666666665
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-15 Score=155.78 Aligned_cols=193 Identities=20% Similarity=0.265 Sum_probs=160.8
Q ss_pred CCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 006570 98 GKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 98 ~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
+.......||+.|.+ ..+|..+..+..|+.|.|.+|.+ ..+|..+.+|..|++|||+.|+++ .+|..++.| -|+.|
T Consensus 73 ~ltdt~~aDlsrNR~-~elp~~~~~f~~Le~liLy~n~~-r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l-pLkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRF-SELPEEACAFVSLESLILYHNCI-RTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL-PLKVL 148 (722)
T ss_pred cccchhhhhcccccc-ccCchHHHHHHHHHHHHHHhccc-eecchhhhhhhHHHHhhhccchhh-cCChhhhcC-cceeE
Confidence 345566788888887 46788888899999999999999 578999999999999999999999 889888876 48999
Q ss_pred EccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCc
Q 006570 178 VLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGP 255 (640)
Q Consensus 178 ~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 255 (640)
-+++|+++..+++++.+..|..||.+.|++....+.. +.+|+.|.+..|++. .+|..+..|+ |..||+|.|+++ .
T Consensus 149 i~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~ 225 (722)
T KOG0532|consen 149 IVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-Y 225 (722)
T ss_pred EEecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-e
Confidence 9999999999988998899999999999997777665 788999999999998 6888888654 899999999998 7
Q ss_pred CCccccCCCCCcEEEccCCcCCccCCccccC---CCCCCEEeccCc
Q 006570 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISC---SAKLNFVEISHN 298 (640)
Q Consensus 256 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~---~~~L~~L~ls~N 298 (640)
+|-.|.+|..|++|-|.+|.+.. .|..+.- .-=.++|+..-+
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLqS-PPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQS-PPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred cchhhhhhhhheeeeeccCCCCC-ChHHHHhccceeeeeeecchhc
Confidence 89999999999999999999975 5554432 122355665555
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.6e-13 Score=144.48 Aligned_cols=146 Identities=21% Similarity=0.163 Sum_probs=101.3
Q ss_pred CCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--------------------------C--------------h
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------------------------L--------------P 491 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~--------------~ 491 (640)
.|+ .+.||.|++|.||+|++.+|+.||||+.+..... . +
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 4789999999999999999999999998643100 0 0
Q ss_pred HHHHHHHHHHhcC----CCcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHH
Q 006570 492 QSLMQHVELLSKL----RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567 (640)
Q Consensus 492 ~~~~~E~~~l~~l----~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~i 567 (640)
-+|.+|.+.+.++ +|.+-+.+-.++.. .....++||||++|++|.++..... ... .+..++..+
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~vLvmE~i~G~~L~~~~~~~~--~~~---~~~~ia~~~ 265 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWD-------RTSERVLTMEWIDGIPLSDIAALDE--AGL---DRKALAENL 265 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehh-------hcCCceEEEEeECCcccccHHHHHh--cCC---CHHHHHHHH
Confidence 0244555555554 23333333333321 1223689999999999998875311 112 244566666
Q ss_pred HH-HhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 568 TR-GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 568 a~-~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
++ .+..+|. .+++|+|+||.||++++++++++.|||++.....
T Consensus 266 ~~~~l~ql~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 266 ARSFLNQVLR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHHHh---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 65 4677887 6999999999999999999999999999987653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-14 Score=159.05 Aligned_cols=172 Identities=16% Similarity=0.201 Sum_probs=127.0
Q ss_pred CCCCccccCCccceEEEE-eCCCcEEEEEEeecc--cCCCh----HHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 454 DPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLP----QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~----~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.....+|.|++|.|+... ....+..+.|..... ..... ..+..|..+-..++|||++..+..+..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~-------- 392 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQE-------- 392 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhh--------
Confidence 346789999999888776 334444555543311 11111 225567777788899999887766542
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.....-+||||++ +|+.++.. ...+...++-.++.|+..|++|+|+ .+|.|||+|++|++++.++.+||+|||
T Consensus 393 ~~~~~~~mE~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 393 IDGILQSMEYCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred cccchhhhhcccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecC
Confidence 1122334999999 99999964 3467888899999999999999999 899999999999999999999999999
Q ss_pred CCccccCCCCc---------------------c--CCCCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL---------------------S--FHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~---------------------~--~~~~~~DvwS~Gvvl~elltG~ 640 (640)
.+......... . ......||||.||+++.|++|.
T Consensus 466 ~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~ 522 (601)
T KOG0590|consen 466 AASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGR 522 (601)
T ss_pred cceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCC
Confidence 98754321110 1 2277889999999999999873
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.45 E-value=7e-14 Score=149.74 Aligned_cols=182 Identities=29% Similarity=0.383 Sum_probs=114.1
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCC-CCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCC
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW-SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLE 198 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 198 (640)
+..++.++.|++.+|.+ ..+|.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++..++....+++|+
T Consensus 112 ~~~~~~l~~L~l~~n~i-~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~ 189 (394)
T COG4886 112 LLELTNLTSLDLDNNNI-TDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLN 189 (394)
T ss_pred hhcccceeEEecCCccc-ccCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhhhhhhhhhh
Confidence 44556677777777776 34555555553 6777777777776 565666677777777777777776666555666777
Q ss_pred eeEccCCCCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 199 ELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 199 ~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
.|++++|++....+. ....|++|.+++|.+. ..+..+.++.++..|.+++|++. .++..++.+++++.|++++|++
T Consensus 190 ~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i 267 (394)
T COG4886 190 NLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQI 267 (394)
T ss_pred heeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccc
Confidence 777777776655554 2444666666666433 34555666666666666666665 2355566666666666666666
Q ss_pred CccCCccccCCCCCCEEeccCccCcccCCCC
Q 006570 277 SEALPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 277 ~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
+. ++. +..+.+++.||+++|.++..+|..
T Consensus 268 ~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 268 SS-ISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred cc-ccc-ccccCccCEEeccCccccccchhh
Confidence 54 333 666666666666666666555443
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.8e-13 Score=143.13 Aligned_cols=127 Identities=24% Similarity=0.398 Sum_probs=106.9
Q ss_pred HhcCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCC
Q 006570 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (640)
Q Consensus 501 l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 580 (640)
|+.+.|.|+.+++|.++. +...++|.+||..|+|.|.+.. ....++|.....+.++++.||+|+|+. +
T Consensus 1 l~~l~h~n~~~f~g~~~~--------~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~ 68 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD--------GPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS--P 68 (484)
T ss_pred CcccchhhhhhheeeEec--------CCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC--c
Confidence 457889999999999983 3558999999999999999975 456799999999999999999999983 3
Q ss_pred CeeccCCCCCceeecCCCceEEeCCCCCccccCC----CCc--------------------cC--C-CCccceehhhHHH
Q 006570 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR----NTL--------------------SF--H-TDRSSLYKIILII 633 (640)
Q Consensus 581 ~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~----~~~--------------------~~--~-~~~~DvwS~Gvvl 633 (640)
-..|+.++++|+++|....+|++|||+....... ... .. . +.++||||||+++
T Consensus 69 i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 69 IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred ceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 3499999999999999999999999998876421 000 11 2 7889999999999
Q ss_pred HHHhhc
Q 006570 634 CVITLC 639 (640)
Q Consensus 634 ~elltG 639 (640)
+|+++-
T Consensus 149 ~ei~~r 154 (484)
T KOG1023|consen 149 YEILFR 154 (484)
T ss_pred HHHHhc
Confidence 999863
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-13 Score=146.83 Aligned_cols=196 Identities=28% Similarity=0.341 Sum_probs=170.3
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCC-CCCEEEccCccCCccCCCccCcCcCCeeEccCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK-NLKSIVLADNLLNGSVPDLQRLVLLEELNLGGN 205 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N 205 (640)
..|++..|.+... +..+..++.++.|++.+|.++ .+|.....++ +|+.|++++|.+...+..+..+++|+.|++++|
T Consensus 96 ~~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 96 PSLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred ceeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhhhhhhhhccccccccccCCc
Confidence 4688888888443 345677799999999999999 8888888885 999999999999988777999999999999999
Q ss_pred CCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcc
Q 006570 206 DFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283 (640)
Q Consensus 206 ~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 283 (640)
+++...+. ..++|+.|++++|+++ .+|.....+..|++|++++|++. ..+..+.++.++..|.+++|++.. ++..
T Consensus 174 ~l~~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~ 250 (394)
T COG4886 174 DLSDLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPES 250 (394)
T ss_pred hhhhhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccch
Confidence 99888776 5899999999999998 77877777778999999999755 466778999999999999999964 5788
Q ss_pred ccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 284 ISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 284 ~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++.+++++.|++++|+++. ++. ++...+++.+++++|.+....+
T Consensus 251 ~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 251 IGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hccccccceeccccccccc-ccc-ccccCccCEEeccCccccccch
Confidence 8999999999999999984 444 8899999999999999987655
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-13 Score=136.41 Aligned_cols=181 Identities=17% Similarity=0.224 Sum_probs=112.8
Q ss_pred CCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCC----------cccceeeeEEEecc
Q 006570 455 PTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRH----------RHLVSILGHCILTY 520 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~l~g~~~~~~ 520 (640)
..+.||.|+++.||.++.. +|+++|||....... ...+++++|.-....+.+ -.++..++......
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 3578999999999999954 589999999864332 234566776655544322 12232233322111
Q ss_pred cCCC----CCCC-----eEEEEEEccCCCCHhHHhhc---cC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC
Q 006570 521 QDHP----NTGS-----TVFLVLEHISNGSLRDYLTD---WK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (640)
Q Consensus 521 ~~~~----~~~~-----~~~lv~Ey~~~GsL~~~l~~---~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 587 (640)
.... .... ..+++|+-+ .+||.+++.. .. ....+....++.+..|+++.+++||+ .+++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEeccc
Confidence 1000 0011 236788888 4599888652 11 11223445567778999999999999 79999999
Q ss_pred CCCceeecCCCceEEeCCCCCccccCCCC-------c--------c-------CC-CCccceehhhHHHHHHhhc
Q 006570 588 KTENILLDKALTAKLSGYNIPLPSKVRNT-------L--------S-------FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 588 k~~NILl~~~~~~kl~DfGla~~~~~~~~-------~--------~-------~~-~~~~DvwS~Gvvl~elltG 639 (640)
||+|++++++|.++|+||+.....+.... . . .. +.+.|.|++|+++|.|.+|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999999999999987654432111 0 1 12 8888999999999999986
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.4e-14 Score=154.57 Aligned_cols=171 Identities=16% Similarity=0.178 Sum_probs=131.8
Q ss_pred CCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC-CChHHHHHHHHH--HhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVEL--LSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+|...+.+|++.|=+|.+|+.+.|. |+||++-+..+ -..+.|.++++- ...++|||++++.-+- ....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~--------~t~k 94 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL--------VTDK 94 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH--------HhhH
Confidence 5667789999999999999988776 88999865542 334455544433 4445899999876442 1334
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|||=+|..+ +|+|.+.. +.-+...+.+-|+.|++.|+.-+|. .+|.|+|||.+|||++...=+.|+||.--
T Consensus 95 AAylvRqyvkh-nLyDRlST---RPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 95 AAYLVRQYVKH-NLYDRLST---RPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred HHHHHHHHHhh-hhhhhhcc---chHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhccccc
Confidence 46788888877 99998853 4557778889999999999999999 79999999999999999988999999877
Q ss_pred ccccCCCC----c-------------------------------cCC-CCccceehhhHHHHHHhh
Q 006570 609 LPSKVRNT----L-------------------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 609 ~~~~~~~~----~-------------------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
+...-.+. . ... +++-||||.||++.||++
T Consensus 168 KPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~ 233 (1431)
T KOG1240|consen 168 KPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFL 233 (1431)
T ss_pred CCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHh
Confidence 65421111 0 222 678899999999999986
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.9e-12 Score=126.74 Aligned_cols=126 Identities=20% Similarity=0.263 Sum_probs=95.4
Q ss_pred CCcccceeeeEEEecccCC-------------------CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHH
Q 006570 505 RHRHLVSILGHCILTYQDH-------------------PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565 (640)
Q Consensus 505 ~h~niv~l~g~~~~~~~~~-------------------~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~ 565 (640)
+|||||++.+++++....- ...+...|+||.-++. +|.+|+.. ...+...+..+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc----CCCchHHHHHHHH
Confidence 5999999999886432111 1135578999998877 99999963 3456677788999
Q ss_pred HHHHHhhhcccCCCCCeeccCCCCCceee--cCCC--ceEEeCCCCCccccCCCCc------------------------
Q 006570 566 GATRGVQFLHTGVAPGIFGNNLKTENILL--DKAL--TAKLSGYNIPLPSKVRNTL------------------------ 617 (640)
Q Consensus 566 ~ia~~L~yLH~~~~~~iiHrDlk~~NILl--~~~~--~~kl~DfGla~~~~~~~~~------------------------ 617 (640)
|+++|+.|||. ++|.|||+|+.|||+ |+|+ ...|+|||.+-..+...-.
T Consensus 349 QlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 99999999999 799999999999998 4444 4688999986433221100
Q ss_pred --cC---C-CCccceehhhHHHHHHhh
Q 006570 618 --SF---H-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 618 --~~---~-~~~~DvwS~Gvvl~ellt 638 (640)
+. . -.|+|.|+.|-+.||+++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg 452 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFG 452 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhc
Confidence 11 2 789999999999999985
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.7e-12 Score=135.34 Aligned_cols=146 Identities=18% Similarity=0.162 Sum_probs=94.2
Q ss_pred hcCCCCCCccccCCccceEEEEeCC-CcEEEEEEeecccCC----------------------------------ChH--
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRH----------------------------------LPQ-- 492 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~-- 492 (640)
...|+. +.||+|++|+||+|++++ |+.||||+.+..... ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 899999999999999877 999999999743100 011
Q ss_pred ----HHHHHHHHHhcCC----CcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCC---CCCCHHHHH
Q 006570 493 ----SLMQHVELLSKLR----HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK---DMLKWPQRM 561 (640)
Q Consensus 493 ----~~~~E~~~l~~l~----h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~---~~l~~~~~~ 561 (640)
++.+|...+.+++ +.+.+.+-.++++ -....+|||||++|+++.++-.-.... ..+......
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d-------~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~ 270 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWD-------YCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVE 270 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecc-------cCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHH
Confidence 2344444444442 3333333333321 123468999999999998753210111 112233333
Q ss_pred HHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----ceEEeCCCCCccccC
Q 006570 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----TAKLSGYNIPLPSKV 613 (640)
Q Consensus 562 ~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~~kl~DfGla~~~~~ 613 (640)
.++.|+. . .+++|+|+||.||+++.++ ++++.|||++.....
T Consensus 271 ~~~~Qif-------~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQVF-------R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHH-------h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3444443 2 4899999999999999988 999999999987654
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=115.31 Aligned_cols=131 Identities=15% Similarity=0.027 Sum_probs=95.2
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccc-eeeeEEEecccCCCCCCCeEEEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV-SILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
.+.++.|.++.||+++.. +..|++|....... ....+.+|+++++.+.+.+++ +++.+. ....++||
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~----------~~~~~lv~ 70 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD----------PETGVLIT 70 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe----------CCCCeEEE
Confidence 356889999999999875 77899998764432 234568899999988655544 444322 11247999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC--CCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV--APGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
||+++.++.+.- . ....++.+++++++.||... ...++|+|++|.||+++ ++.+++.|||.+..
T Consensus 71 e~i~G~~l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 71 EFIEGSELLTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred EecCCCcccccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 999998775430 0 11345678999999999832 12369999999999999 66899999999864
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3e-12 Score=129.24 Aligned_cols=181 Identities=20% Similarity=0.207 Sum_probs=133.8
Q ss_pred hcCCCCCcEeecccCcCcCCCC--ccccCCCCCCEEEcccCcccccCC--ccccCCCCCCEEEccCccCCccCCC--ccC
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLP--SKINRFWSLEVLNISSNFIYGEIP--MEITSLKNLKSIVLADNLLNGSVPD--LQR 193 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~--~~~ 193 (640)
=.++.+|+...|.+... +..+ .....|++++.||||.|-|..-.| .....|++|+.|+|+.|++.-...+ -..
T Consensus 117 Qsn~kkL~~IsLdn~~V-~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRV-EDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCccc-cccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 35788899999988776 3334 356779999999999998884333 2356789999999999999876665 346
Q ss_pred cCcCCeeEccCCCCCCCC----CCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcC-CccccCCCCCcE
Q 006570 194 LVLLEELNLGGNDFGPKF----PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILY 268 (640)
Q Consensus 194 l~~L~~L~L~~N~l~~~~----~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~ 268 (640)
++.|+.|.|+.|.|+-.- -..+++|+.|+|..|...+.--.....+..|++|||++|++-... -...+.++.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 788999999999987221 122789999999999643344444556778999999999986432 134578889999
Q ss_pred EEccCCcCCcc-CCcc-----ccCCCCCCEEeccCccCc
Q 006570 269 LNLAGNQLSEA-LPVN-----ISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 269 L~l~~N~l~~~-~p~~-----~~~~~~L~~L~ls~N~l~ 301 (640)
|+++.+.+... .|+. ....++|++|+++.|++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 99999988653 2332 245678999999999885
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.7e-12 Score=130.31 Aligned_cols=104 Identities=14% Similarity=0.336 Sum_probs=90.3
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
+.|+.|++|...+|.+|+...+.....++.....++.|++.|++| . +.+|||+||.||....+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y--k----~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY--K----GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh--c----cchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999866666778899999999999999999 3 8999999999999999999999999998
Q ss_pred ccccCCCCc-----------------------cCC-CCccceehhhHHHHHHhh
Q 006570 609 LPSKVRNTL-----------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 609 ~~~~~~~~~-----------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
.......+. +.+ +.|+||||+|++|+|++.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 655433310 345 999999999999999986
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-11 Score=119.03 Aligned_cols=133 Identities=26% Similarity=0.276 Sum_probs=106.4
Q ss_pred ccCcCcCCeeEccCCCCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcE
Q 006570 191 LQRLVLLEELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILY 268 (640)
Q Consensus 191 ~~~l~~L~~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 268 (640)
......|++||||+|.++..--+ ..+.++.|++++|.+.. + ..+..+++|+.||||+|.++ .+..+-.++.+++.
T Consensus 280 ~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred cchHhhhhhccccccchhhhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 44566799999999998754433 36889999999999973 3 34888999999999999998 45667778899999
Q ss_pred EEccCCcCCccCCccccCCCCCCEEeccCccCcccC-CCCccCCCCCceeeeccccccCcc
Q 006570 269 LNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKL-PSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 269 L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~-p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
|.|++|.|.. + ..+..+-+|..||+++|+|...- -..+++++-|+.+.+.+|.+.+.+
T Consensus 357 L~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 357 LKLAQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eehhhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 9999999854 2 23667788999999999997321 245888999999999999999864
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.6e-12 Score=121.21 Aligned_cols=132 Identities=21% Similarity=0.189 Sum_probs=96.9
Q ss_pred CCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-CcccccceeecccCcccccCCccccCCCCccEEEcc
Q 006570 170 SLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDIS 248 (640)
Q Consensus 170 ~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (640)
..+.|+.||||+|.|+.+-.+..-++.++.|++|+|.+...-. ..+.+|+.|+|++|.++ .+...-.++.+.+.|.|+
T Consensus 282 TWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 282 TWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hHhhhhhccccccchhhhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 3456778888888887766666667788888888888754332 23678888888888887 344455567788899999
Q ss_pred CCcccCcCCccccCCCCCcEEEccCCcCCccC-CccccCCCCCCEEeccCccCcccC
Q 006570 249 SNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL-PVNISCSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 249 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~~~~L~~L~ls~N~l~~~~ 304 (640)
+|.|... ..+.++=+|..||+++|+|...- -..+++++.|+.+.|.+|.+.+.+
T Consensus 361 ~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 361 QNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 9988632 34677778889999999886421 235788999999999999998644
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.8e-11 Score=111.17 Aligned_cols=82 Identities=27% Similarity=0.364 Sum_probs=14.9
Q ss_pred CCCCCcEeecccCcCcCCCCcccc-CCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCc-cCcCcCCe
Q 006570 122 KLSNLKVLSLVSLGLWGPLPSKIN-RFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL-QRLVLLEE 199 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-~~l~~L~~ 199 (640)
+...++.|+|.+|.|+. +. .++ .+.+|+.|||++|.|+ .++ .+..+++|+.|++++|+|+...+.+ ..+++|++
T Consensus 17 n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred ccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 33344555555555532 21 233 3445555555555554 222 2444444444444444444433222 23444444
Q ss_pred eEccCCCC
Q 006570 200 LNLGGNDF 207 (640)
Q Consensus 200 L~L~~N~l 207 (640)
|+|++|++
T Consensus 93 L~L~~N~I 100 (175)
T PF14580_consen 93 LYLSNNKI 100 (175)
T ss_dssp EE-TTS--
T ss_pred EECcCCcC
Confidence 44444443
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.9e-10 Score=104.87 Aligned_cols=139 Identities=10% Similarity=0.075 Sum_probs=98.5
Q ss_pred CCccccCCccceEEEEeCC-------CcEEEEEEeecccC----------------------CChHHHH----HHHHHHh
Q 006570 456 TNLIGEGSQGQLYKGFLTD-------GSRVSVKCLKLKQR----------------------HLPQSLM----QHVELLS 502 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~~~----~E~~~l~ 502 (640)
...||.|.=+.||.|.-.+ +..+|||+.+.... ...+.+. +|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998543 47999998863210 0012233 7899998
Q ss_pred cCCC--cccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhH-HhhccCCCCCCCHHHHHHHHHHHHHHhhhc-ccCC
Q 006570 503 KLRH--RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRD-YLTDWKKKDMLKWPQRMAIIIGATRGVQFL-HTGV 578 (640)
Q Consensus 503 ~l~h--~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~ 578 (640)
++.. -++..++++. .-++||||+.++.+.. .++ ...++..+...+..+++.+|.++ |.
T Consensus 82 rl~~~Gv~vP~pi~~~------------~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~-- 143 (197)
T cd05146 82 RMQKAGIPCPEVVVLK------------KHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKE-- 143 (197)
T ss_pred HHHHcCCCCCeEEEec------------CCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHh--
Confidence 8853 4555666432 1489999997654422 232 12344456677889999999999 66
Q ss_pred CCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 579 APGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 579 ~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
.++||+|+++.||+++ ++.+.|+|||-+.....+
T Consensus 144 -~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp 177 (197)
T cd05146 144 -CNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHP 177 (197)
T ss_pred -CCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence 6999999999999997 467999999998776543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-11 Score=110.98 Aligned_cols=61 Identities=28% Similarity=0.347 Sum_probs=9.0
Q ss_pred ccCCCCCCEEEcccCcccccCCcccc-CCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCC
Q 006570 144 INRFWSLEVLNISSNFIYGEIPMEIT-SLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDF 207 (640)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l 207 (640)
+.+..++++|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+.+ +++..++.|++|++++|++
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l-~~l~~L~~L~~L~L~~N~I 76 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL-EGLPGLPRLKTLDLSNNRI 76 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---TT----TT--EEE--SS--
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc-cCccChhhhhhcccCCCCC
Confidence 334445555555555555 222 233 344555555555555432 2334444444444444443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.8e-11 Score=131.44 Aligned_cols=139 Identities=22% Similarity=0.374 Sum_probs=96.1
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|...+.|-.|+||.||..+++ ..+++|+|+-+ +.- ++ +||..+-| .
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l-----------il-----Rnilt~a~--------------n 131 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL-----------IL-----RNILTFAG--------------N 131 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccc-cch-----------hh-----hccccccC--------------C
Confidence 56788899999999999999865 36788884332 211 11 12332221 1
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.+.| |+=...+.. .+.++- +++.+++|+|+ .+|+|||+||+|.+|..-|.+|+.|||+.+
T Consensus 132 pfvv------gDc~tllk~---~g~lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 132 PFVV------GDCATLLKN---IGPLPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred ccee------chhhhhccc---CCCCcc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhh
Confidence 2334 344444432 222321 22688999999 899999999999999999999999999987
Q ss_pred cccCCCCc-------------------------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-------------------------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-------------------------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
........ -++ ++.+|.|++|+++||.+.||
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgc 255 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGC 255 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheee
Confidence 54211100 122 88899999999999999998
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.08 E-value=1e-09 Score=107.35 Aligned_cols=146 Identities=17% Similarity=0.225 Sum_probs=108.8
Q ss_pred CccccCCccceEEEEeCCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCc--ccceeeeEEEecccCCCCCCCeEEEE
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHR--HLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
+.++.|.++.||+++..+|+.+++|....... ....++.+|+++++.+++. ++.+++.+.... ......++|
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~-----~~~~~~~~v 78 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDP-----SVLGTPFYV 78 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCC-----CccCCceEE
Confidence 56899999999999987678999999764332 1346789999999999753 456677655310 011346899
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccC------------------------------------
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG------------------------------------ 577 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------ 577 (640)
|||++++++.+.+.. ..++..++..++.+++++|.+||+-
T Consensus 79 ~e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 79 MERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred EEEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 999999888775521 3466777778888888888888842
Q ss_pred -----------------CCCCeeccCCCCCceeecC--CCceEEeCCCCCccc
Q 006570 578 -----------------VAPGIFGNNLKTENILLDK--ALTAKLSGYNIPLPS 611 (640)
Q Consensus 578 -----------------~~~~iiHrDlk~~NILl~~--~~~~kl~DfGla~~~ 611 (640)
....++|+|+++.||+++. ++.+.|.||+.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 1245799999999999998 667899999988653
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-11 Score=131.48 Aligned_cols=214 Identities=23% Similarity=0.222 Sum_probs=124.6
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..+..+++..|.+.. +-..+..+++|+.|++.+|.|.. +...+..+++|++|+|++|.|+...+ +..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhhhee
Confidence 344455555565533 23346667777777777777743 33236667777777777777764332 455566777777
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCC---CcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcC
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP---SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 256 (640)
++|.|+. ++.+..+.+|+.+++++|++....+ ..+.+++.+.+.+|.+.. ...+..+..+..+++..|.++..-
T Consensus 148 ~~N~i~~-~~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~ 224 (414)
T KOG0531|consen 148 SGNLISD-ISGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLE 224 (414)
T ss_pred ccCcchh-ccCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceecc
Confidence 7777764 3345557777777777777766655 446677777777777752 233444445555577777766332
Q ss_pred CccccCCCC--CcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 257 QSFLFSLPS--ILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 257 p~~~~~l~~--L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
+ +..+.. |+.+++++|.+.. ++..+..+..+..||+++|++...- .+.....+..+....|.+.
T Consensus 225 ~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 225 G--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred C--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccccc--cccccchHHHhccCcchhc
Confidence 2 222222 6777777777753 3345556667777777777765321 1223333444444555444
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.4e-11 Score=131.85 Aligned_cols=178 Identities=14% Similarity=0.228 Sum_probs=135.8
Q ss_pred cCCCCCCccccCCccceEEEEeC--CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~ 525 (640)
..|...+.||+|+|+.|-..... ....+|+|.+.... ....+....|..+-..+. |+|++.+++...
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-------- 91 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS-------- 91 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC--------
Confidence 45666778999999999888743 34567777765432 222344555777666775 999999998653
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcc-cCCCCCeeccCCCCCceeecCCC-ceEEe
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH-TGVAPGIFGNNLKTENILLDKAL-TAKLS 603 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~iiHrDlk~~NILl~~~~-~~kl~ 603 (640)
..+..++++||..+|++.+.+.. ......+......+..|+..++.|+| . .++.|||+||+|.+++..+ ..|++
T Consensus 92 ~~~~~~~~~~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~ 167 (601)
T KOG0590|consen 92 SPRSYLLSLSYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIA 167 (601)
T ss_pred CCcccccccCccccccccccccc-CCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCC
Confidence 45568999999999999998831 12224566777889999999999999 6 6999999999999999999 99999
Q ss_pred CCCCCccccC-CCCc--------------------c--CCCCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKV-RNTL--------------------S--FHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~-~~~~--------------------~--~~~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+|..... .... + ...+..|+||.|+++.-+++|.
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~ 227 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGE 227 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCC
Confidence 9999977654 2111 2 1278899999999999988873
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.5e-09 Score=98.93 Aligned_cols=133 Identities=23% Similarity=0.282 Sum_probs=94.0
Q ss_pred CccccCCccceEEEEeCCCcEEEEEE-eecccCC-------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQRH-------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~-~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
..+++|+=+.+|.+.+- |..+.+|. +++.... ..++..+|..++.+++--.|....=|.+ +..
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--------DPD 72 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--------cCC
Confidence 45789999999999764 34455553 2222111 1245678999998886444433332333 223
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
...|+|||+++-.|.+.+... +..++..+-.-+.-||. .+|+|+|+.++||++..+. +.++|||++
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg 138 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLG 138 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcc
Confidence 357999999998999888641 24566777777888999 6999999999999997765 999999999
Q ss_pred cccc
Q 006570 609 LPSK 612 (640)
Q Consensus 609 ~~~~ 612 (640)
+...
T Consensus 139 ~~s~ 142 (204)
T COG3642 139 EFSD 142 (204)
T ss_pred cccc
Confidence 8654
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.1e-11 Score=128.81 Aligned_cols=217 Identities=23% Similarity=0.184 Sum_probs=158.7
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
..+..+...+.+...--. ...+..++.+++..|.+.. +-..+..+++|+.|++..|+|. .+...+..+++|++|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecc
Confidence 344444444443222111 2567888888899998854 4445888999999999999999 555457889999999999
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCc-ccccceeecccCcccccCC-ccccCCCCccEEEccCCcccCcCCc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL-SKNIVSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGPIQS 258 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~ 258 (640)
+|+|+.+. ++..++.|+.|++++|.++...--. +.+|+.+++++|.+...-+ . ...+.+|+.+++++|.+.-. .
T Consensus 127 ~N~I~~i~-~l~~l~~L~~L~l~~N~i~~~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~ 202 (414)
T KOG0531|consen 127 FNKITKLE-GLSTLTLLKELNLSGNLISDISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--E 202 (414)
T ss_pred cccccccc-chhhccchhhheeccCcchhccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--c
Confidence 99998654 4667777999999999997543322 8899999999999985444 2 57788899999999998732 3
Q ss_pred cccCCCCCcEEEccCCcCCccCCccccCCCC--CCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAK--LNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~--L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.+..+..+..+++..|.++..-+ +..+.. |+.+++++|++. .++..+..+..+..+++..|.+...
T Consensus 203 ~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 203 GLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred chHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc
Confidence 44555666677899999875433 222333 899999999998 4445667778888899998887764
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.9e-11 Score=120.61 Aligned_cols=183 Identities=18% Similarity=0.192 Sum_probs=141.3
Q ss_pred cccCCCCCCEEEcccCcccccCC--ccccCCCCCCEEEccCccCCccCCC---ccCcCcCCeeEccCCCCCCCCCC----
Q 006570 143 KINRFWSLEVLNISSNFIYGEIP--MEITSLKNLKSIVLADNLLNGSVPD---LQRLVLLEELNLGGNDFGPKFPS---- 213 (640)
Q Consensus 143 ~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~---~~~l~~L~~L~L~~N~l~~~~~~---- 213 (640)
.=+++.+|+...|.+.... ..+ .....|++++.|||++|.|...-+- ...|++|+.|+|+.|++.-...+
T Consensus 116 kQsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~ 194 (505)
T KOG3207|consen 116 KQSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTL 194 (505)
T ss_pred HhhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchh
Confidence 3468899999999999887 444 3567899999999999999876553 57899999999999998654443
Q ss_pred cccccceeecccCcccc-cCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCC--ccccCCCCC
Q 006570 214 LSKNIVSVILRNNSLRS-EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP--VNISCSAKL 290 (640)
Q Consensus 214 ~~~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~~~~L 290 (640)
.++.|+.|.|+.|.|+. .+-.....+++|+.|+|.+|...+.-.....-+..|+.|||++|++-. .+ ...+.++.|
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L 273 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGL 273 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccch
Confidence 37899999999999983 222334568999999999996443444445567889999999999864 34 446778899
Q ss_pred CEEeccCccCccc-CCCC-----ccCCCCCceeeeccccccCc
Q 006570 291 NFVEISHNLLIGK-LPSC-----IGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 291 ~~L~ls~N~l~~~-~p~~-----~~~~~~l~~l~l~~N~l~~~ 327 (640)
+.|+++.+.+... .|+. ....++|+.|++..|++...
T Consensus 274 ~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w 316 (505)
T KOG3207|consen 274 NQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDW 316 (505)
T ss_pred hhhhccccCcchhcCCCccchhhhcccccceeeecccCccccc
Confidence 9999999988743 3433 34567899999999988654
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.3e-09 Score=93.95 Aligned_cols=145 Identities=20% Similarity=0.214 Sum_probs=100.2
Q ss_pred CCCccccCCccceEEEEeCCCcEEEEEE-eecccC-------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~-~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
....+-+|+-+.|+++.+. |+...||. +.+... -..++..+|++.+.+++--.|.-..=++.+.
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~------- 82 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT------- 82 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec-------
Confidence 4678899999999999985 66666663 332211 1245678899999888644443333233322
Q ss_pred CCeEEEEEEccCC-CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC---ceEE
Q 006570 527 GSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL---TAKL 602 (640)
Q Consensus 527 ~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl 602 (640)
..-.|+|||+++ -++.+++...-... .........+..|-+.+.-||. .+|||+||..+||++..++ .+.+
T Consensus 83 -~~~~i~ME~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~l 157 (229)
T KOG3087|consen 83 -YGGQIYMEFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPIL 157 (229)
T ss_pred -CCCeEEEEeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEE
Confidence 124789999976 47888886532222 2222236788888899999999 5999999999999997664 4589
Q ss_pred eCCCCCcccc
Q 006570 603 SGYNIPLPSK 612 (640)
Q Consensus 603 ~DfGla~~~~ 612 (640)
.|||++....
T Consensus 158 Idfgls~~s~ 167 (229)
T KOG3087|consen 158 IDFGLSSVSR 167 (229)
T ss_pred Eeecchhccc
Confidence 9999987543
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.4e-09 Score=109.94 Aligned_cols=169 Identities=17% Similarity=0.139 Sum_probs=132.1
Q ss_pred cceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCC-CCH
Q 006570 465 GQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN-GSL 542 (640)
Q Consensus 465 g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~-GsL 542 (640)
.+.||+. -.||..|+.|++...+.........-++.++++.|+|+|++..++.... -....+++||+|.|+ ++|
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t----F~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT----FGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc----cCcceEEEEEecCCCCchH
Confidence 5789998 5689999999996544333333445678899999999999998876211 134568999999985 688
Q ss_pred hHHhhccC------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 543 RDYLTDWK------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 543 ~~~l~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
.++--... .....++...|.++.|+..||.++|+ .|..-+-+.+++|+++.+.+++|+..|+...
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceee
Confidence 87654311 13346788999999999999999999 6998899999999999999999999999877
Q ss_pred ccCCCCccCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNTLSFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~~~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........-+ -.+-|.=.||.+++-|.|||
T Consensus 443 l~~d~~~~le~~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 443 LQEDPTEPLESQQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred ecCCCCcchhHHhhhhHHHHHHHHHHHhhcc
Confidence 6555533223 66788889999999999996
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.8e-09 Score=113.19 Aligned_cols=150 Identities=20% Similarity=0.226 Sum_probs=116.4
Q ss_pred eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC
Q 006570 472 LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551 (640)
Q Consensus 472 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~ 551 (640)
..++.+|.|...+.......+...+-++.|+.++||||++++.... .....|+|+|-+. .|..++.+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e--------~~~~~ylvTErV~--Pl~~~lk~--- 100 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTE--------EEGTLYLVTERVR--PLETVLKE--- 100 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhc--------ccCceEEEeeccc--cHHHHHHH---
Confidence 4578899999888655444456778889999999999999987552 4457899999884 67777764
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCC---c-----cCC---
Q 006570 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT---L-----SFH--- 620 (640)
Q Consensus 552 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~---~-----~~~--- 620 (640)
+......-.+.||+.||.|||+. .+++|++|.-..|++++.|+-||++|-++........ . +..
T Consensus 101 ---l~~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~ 175 (690)
T KOG1243|consen 101 ---LGKEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPE 175 (690)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChh
Confidence 23555666789999999999976 5899999999999999999999999988754432221 0 111
Q ss_pred -----CCccceehhhHHHHHHhhc
Q 006570 621 -----TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 621 -----~~~~DvwS~Gvvl~elltG 639 (640)
....|.|-|||+++|++.|
T Consensus 176 ~~~~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 176 EIDPSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hcCccccchhhhhHHHHHHHHhCc
Confidence 2235999999999999877
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.2e-10 Score=107.67 Aligned_cols=137 Identities=19% Similarity=0.217 Sum_probs=102.5
Q ss_pred HHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccC
Q 006570 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTG 577 (640)
Q Consensus 499 ~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~ 577 (640)
.-+-.+.|.|+|+++.|+.+.-+ ++.....++.|||+.|++.++|++.+ ....+....-.+++.||..||.|||+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~---~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs- 194 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKY---EEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS- 194 (458)
T ss_pred HHHHHHHHHHHHHHHHhhccccc---ccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-
Confidence 44556679999999998864322 24456889999999999999998633 34557777778999999999999998
Q ss_pred CCCCeeccCCCCCceeecCCCceEEeCCCCCcccc---------C------CCCc------cCC-CCccceehhhHHHHH
Q 006570 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK---------V------RNTL------SFH-TDRSSLYKIILIICV 635 (640)
Q Consensus 578 ~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~---------~------~~~~------~~~-~~~~DvwS~Gvvl~e 635 (640)
|.++|+|+++..+-|++..++-+|+.----..... . .... ... +..+|||+||...+|
T Consensus 195 ~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 195 CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred cCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 78999999999999999999988875221111100 0 0000 223 788999999999999
Q ss_pred Hhhc
Q 006570 636 ITLC 639 (640)
Q Consensus 636 lltG 639 (640)
|..|
T Consensus 275 mail 278 (458)
T KOG1266|consen 275 MAIL 278 (458)
T ss_pred HHHh
Confidence 8754
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.4e-10 Score=114.39 Aligned_cols=132 Identities=20% Similarity=0.253 Sum_probs=80.8
Q ss_pred cCcCCeeEccCCCCCCCCCC-------cccccceeecccCcccc----cCCccccCCCCccEEEccCCcccCc----CCc
Q 006570 194 LVLLEELNLGGNDFGPKFPS-------LSKNIVSVILRNNSLRS----EIPSGLKNFDQLKQFDISSNNFVGP----IQS 258 (640)
Q Consensus 194 l~~L~~L~L~~N~l~~~~~~-------~~~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 258 (640)
-+.|+++..+.|++...... ..+.|+.+.+..|.+.. .+-..|..+++|+.|||..|-|+.. +..
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 34566666666666432211 13566666666666641 1223456778888888888877632 233
Q ss_pred cccCCCCCcEEEccCCcCCccCCccc-----cCCCCCCEEeccCccCccc----CCCCccCCCCCceeeecccccc
Q 006570 259 FLFSLPSILYLNLAGNQLSEALPVNI-----SCSAKLNFVEISHNLLIGK----LPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~-----~~~~~L~~L~ls~N~l~~~----~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
.+..++.|+.|+++++.+...-..+| ...++|+.|.+.+|.++.. +..++...+.|..|++++|.+.
T Consensus 236 aL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 45567778888888887754322221 2356788888888877632 3334555677888888888774
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.5e-09 Score=82.70 Aligned_cols=59 Identities=25% Similarity=0.408 Sum_probs=28.9
Q ss_pred CccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCcc
Q 006570 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNL 299 (640)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~ 299 (640)
+|+.|++++|+|+...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34445555555544444444445555555555555544444444555555555555544
|
... |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.3e-09 Score=97.60 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=83.7
Q ss_pred ceEEEEeCCCcEEEEEEeecccC-------------C-------------ChHHHHHHHHHHhcCCCc--ccceeeeEEE
Q 006570 466 QLYKGFLTDGSRVSVKCLKLKQR-------------H-------------LPQSLMQHVELLSKLRHR--HLVSILGHCI 517 (640)
Q Consensus 466 ~Vy~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--niv~l~g~~~ 517 (640)
.||.|...+|..+|||+.+.... . ......+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999988899999999864210 0 013467899999999755 456666442
Q ss_pred ecccCCCCCCCeEEEEEEccC--CCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhc-ccCCCCCeeccCCCCCceee
Q 006570 518 LTYQDHPNTGSTVFLVLEHIS--NGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL-HTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~--~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrDlk~~NILl 594 (640)
.-.+||||++ +..+..+... .++......++.+++..+..+ |. .+|+|+|+.+.||++
T Consensus 80 -----------~~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv 140 (188)
T PF01163_consen 80 -----------RNVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILV 140 (188)
T ss_dssp -----------TTEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEE
T ss_pred -----------CCEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEe
Confidence 1389999998 5455443321 111344566777887766664 56 799999999999999
Q ss_pred cCCCceEEeCCCCCccccC
Q 006570 595 DKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~ 613 (640)
+++ .+.++|||.+.....
T Consensus 141 ~~~-~~~iIDf~qav~~~~ 158 (188)
T PF01163_consen 141 DDG-KVYIIDFGQAVDSSH 158 (188)
T ss_dssp ETT-CEEE--GTTEEETTS
T ss_pred ecc-eEEEEecCcceecCC
Confidence 988 999999999876654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.7e-09 Score=82.35 Aligned_cols=61 Identities=33% Similarity=0.507 Sum_probs=54.9
Q ss_pred cccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
++|+.|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888877778899999999999999999988888999999999999999986
|
... |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.5e-09 Score=109.93 Aligned_cols=174 Identities=18% Similarity=0.179 Sum_probs=132.5
Q ss_pred CCCCCCcccc--CCccceEEEEe---CCCcEEEEEEeecc--cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCC
Q 006570 452 NFDPTNLIGE--GSQGQLYKGFL---TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 452 ~~~~~~~ig~--G~~g~Vy~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 523 (640)
.|.....+|. |.+|.||.+.. .++..+|+|+-+.. .......=.+|...-+++ .|+|.++.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~------- 187 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW------- 187 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-------
Confidence 3556788999 99999999986 35788999985432 223333445566666666 488988855443
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHH----HhhhcccCCCCCeeccCCCCCceeecCC-C
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR----GVQFLHTGVAPGIFGNNLKTENILLDKA-L 598 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~iiHrDlk~~NILl~~~-~ 598 (640)
++++..++-+|++. .+|.++.+. ....++....+.+..+..+ |+.++|. ..++|-|+||.||++..+ .
T Consensus 188 -e~~~~lfiqtE~~~-~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 188 -EGSGILFIQTELCG-ESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred -ccCCcceeeecccc-chhHHhhhc--ccccCCchhhhhHHhhhhhcccccccccCC---Ccccccccchhheecccccc
Confidence 25667889999985 599998875 3344677778888888888 9999999 699999999999999999 8
Q ss_pred ceEEeCCCCCccccCCCCc---------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 599 TAKLSGYNIPLPSKVRNTL---------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~---------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
.+++.|||+...+....-. ..- +..+|+||+|.+.+|-.+|
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~ 323 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG 323 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh
Confidence 9999999998877544311 222 8899999999999997765
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=8.5e-10 Score=108.95 Aligned_cols=226 Identities=20% Similarity=0.207 Sum_probs=158.4
Q ss_pred CcEEEEEecCCCCCCC----CCCCCcCCCccccccccCccC---CCChhh-------hhhcCCCCCcEeecccCcCcCCC
Q 006570 75 SRVTELTVIGNKSSPA----HSPKPTFGKFSASQQSLSANF---NIDRFF-------TILTKLSNLKVLSLVSLGLWGPL 140 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~----~~~~~~~~~~~l~~l~l~~n~---~~~~~~-------~~l~~l~~L~~L~L~~n~l~~~~ 140 (640)
..++.|+|+||-+.-. +.. .....++|+..++|+-+ ....+| .++..+++|++||||.|.|...-
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~-~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAK-VLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHH-HHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 5688999999866210 000 00112466666666522 223334 35667889999999999995443
Q ss_pred Cc----cccCCCCCCEEEcccCccccc-------------CCccccCCCCCCEEEccCccCCccCC-----CccCcCcCC
Q 006570 141 PS----KINRFWSLEVLNISSNFIYGE-------------IPMEITSLKNLKSIVLADNLLNGSVP-----DLQRLVLLE 198 (640)
Q Consensus 141 p~----~~~~l~~L~~L~Ls~N~l~~~-------------~p~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~~L~ 198 (640)
+. -+.++..|++|.|.+|.+.-. .-.-...-++|+++..++|++..-.. .|...+.|+
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~le 188 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLE 188 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccc
Confidence 33 356789999999999988721 11223455789999999999975443 277788999
Q ss_pred eeEccCCCCCCCCCC-------cccccceeecccCccccc----CCccccCCCCccEEEccCCcccCcCCccc-----cC
Q 006570 199 ELNLGGNDFGPKFPS-------LSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNFVGPIQSFL-----FS 262 (640)
Q Consensus 199 ~L~L~~N~l~~~~~~-------~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~ 262 (640)
.+.++.|.+...--. ..++|+.|+|++|-|+.. +...+..+++|+.|+++.+.+...-...| ..
T Consensus 189 evr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~ 268 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKES 268 (382)
T ss_pred eEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhcc
Confidence 999999998543221 168999999999999743 33556778899999999999975433333 35
Q ss_pred CCCCcEEEccCCcCCcc----CCccccCCCCCCEEeccCccCc
Q 006570 263 LPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 263 l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
.|+|+.|.|.+|.|+.. +-..+...+.|..|+|++|++.
T Consensus 269 ~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 269 APSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred CCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 78999999999999742 2233455789999999999994
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-08 Score=108.48 Aligned_cols=179 Identities=15% Similarity=0.130 Sum_probs=130.6
Q ss_pred HHHhcCCCCCCccccCCccceEEEEe--CCCcEEEEEEeecccCCChHHH--HHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQRHLPQSL--MQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
...+.+|.....||.|.|+.||+... .++..+++|.+........+++ ..|+.+...+ .|.+++..+..+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~---- 336 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS---- 336 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc----
Confidence 34556788899999999999999874 3578899998875433222221 3344444444 4777776544332
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-Cce
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTA 600 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~ 600 (640)
.-...|+--|||+++++..... -...+++..++++..+++.++.++|+ +.++|+|+||+||++..+ +..
T Consensus 337 ----~~r~~~ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 337 ----QLRQGYIPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred ----ccccccCchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhh
Confidence 2234578899999998877662 24567888899999999999999998 899999999999999886 888
Q ss_pred EEeCCCCCccccC------C---CC--c-----cCC-CCccceehhhHHHHHHhhc
Q 006570 601 KLSGYNIPLPSKV------R---NT--L-----SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 601 kl~DfGla~~~~~------~---~~--~-----~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++.|||.+....- . .. . ... ..+.|+||||.-+.|.++|
T Consensus 407 ~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~ 462 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITG 462 (524)
T ss_pred hccccccccccceecccccccccccccchhhccccccccccccccccccccccccC
Confidence 9999999852110 0 00 0 223 8899999999999888776
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.7e-07 Score=92.24 Aligned_cols=146 Identities=15% Similarity=0.116 Sum_probs=99.4
Q ss_pred CccccCCccceEEEEeCCCcEEEEEEeecccC-----------CChHHHHHHHHHHhcCCCcc--cceeeeEEEecccCC
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-----------HLPQSLMQHVELLSKLRHRH--LVSILGHCILTYQDH 523 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~ 523 (640)
+.+-+.....|++..+ +|+.|.||....... .....+.+|.+.+.++...+ +..++++.... .+
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~-~~- 104 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERG-SN- 104 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEec-CC-
Confidence 3343334445777766 578899997743220 11124778888888874333 33445454211 00
Q ss_pred CCCCCeEEEEEEccCCC-CHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC------
Q 006570 524 PNTGSTVFLVLEHISNG-SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK------ 596 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~------ 596 (640)
.....-++|||++++- +|.+++.... ....+...+..++.+++..+.-||+ .+|+|+|++++|||++.
T Consensus 105 -~~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 105 -PATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred -CccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCC
Confidence 1123468999999875 8999985321 2334566778899999999999999 79999999999999975
Q ss_pred -CCceEEeCCCCCcc
Q 006570 597 -ALTAKLSGYNIPLP 610 (640)
Q Consensus 597 -~~~~kl~DfGla~~ 610 (640)
+..+.++||+.+..
T Consensus 180 ~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 180 EDLKLSVIDLHRAQI 194 (268)
T ss_pred CCceEEEEECCcccc
Confidence 47899999999864
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.8e-08 Score=111.83 Aligned_cols=106 Identities=25% Similarity=0.224 Sum_probs=88.6
Q ss_pred ccccccccCccC--CCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 006570 100 FSASQQSLSANF--NIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 100 ~~l~~l~l~~n~--~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
+.++.|-+..|. +.....+.|..++.|++|||++|.=.+.+|..+++|-+|++|+|++..++ .+|..+.+|++|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 367777777775 33444455888999999999988777889999999999999999999999 999999999999999
Q ss_pred EccCccCCccCCC-ccCcCcCCeeEccCCC
Q 006570 178 VLADNLLNGSVPD-LQRLVLLEELNLGGND 206 (640)
Q Consensus 178 ~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~ 206 (640)
++..+.-...+|. ...|.+|++|.+-.-.
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccc
Confidence 9999987777777 5559999999987654
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.7e-09 Score=115.67 Aligned_cols=124 Identities=23% Similarity=0.157 Sum_probs=58.4
Q ss_pred cCCeeEccCCCCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCc-cccCCCCCcEEEcc
Q 006570 196 LLEELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS-FLFSLPSILYLNLA 272 (640)
Q Consensus 196 ~L~~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~ 272 (640)
.|...+.+.|.+.-.-.+ .++.|+.|+|++|+++.. ..+..|+.|+.|||++|+|+. +|. ....+ .|..|+++
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhh-hheeeeec
Confidence 344444555544322111 144555555555555432 145555556666666666552 222 11222 25556666
Q ss_pred CCcCCccCCccccCCCCCCEEeccCccCcccCC-CCccCCCCCceeeecccccc
Q 006570 273 GNQLSEALPVNISCSAKLNFVEISHNLLIGKLP-SCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 273 ~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p-~~~~~~~~l~~l~l~~N~l~ 325 (640)
+|.++.. ..+.++++|+.||+++|-|++.-- ..++.+..|+.|++.+|.+.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 6655432 124455556666666665543211 11334445555556555544
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.9e-07 Score=86.63 Aligned_cols=139 Identities=19% Similarity=0.168 Sum_probs=95.5
Q ss_pred CCCCCccccCCccceEEEEeCCCcEEEEEEeecccC----------------------CChHHHHHHHHHHhcCCCc--c
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR----------------------HLPQSLMQHVELLSKLRHR--H 508 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~--n 508 (640)
..+.++||-|.=+.||.|..+.|.++|||.=+.... .......+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345789999999999999999999999996542210 0123467899999998654 6
Q ss_pred cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 509 iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
|.+.+++- .-.+||||+++-.|...- ++....-.|+..|++-+.-.-. .||||+|++
T Consensus 173 VP~P~~~n------------RHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~---~GiVHGDlS 229 (304)
T COG0478 173 VPKPIAWN------------RHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR---RGIVHGDLS 229 (304)
T ss_pred CCCccccc------------cceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH---cCccccCCc
Confidence 66666532 358999999885554321 1122222333333333322223 599999999
Q ss_pred CCceeecCCCceEEeCCCCCccccCC
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
+=||++++||.+.++||--+.....+
T Consensus 230 efNIlV~~dg~~~vIDwPQ~v~~~hp 255 (304)
T COG0478 230 EFNILVTEDGDIVVIDWPQAVPISHP 255 (304)
T ss_pred hheEEEecCCCEEEEeCcccccCCCC
Confidence 99999999999999999877665443
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-08 Score=87.31 Aligned_cols=131 Identities=24% Similarity=0.227 Sum_probs=92.6
Q ss_pred cccccccCccCCCChhh---hhhcCCCCCcEeecccCcCcCCCCcccc-CCCCCCEEEcccCcccccCCccccCCCCCCE
Q 006570 101 SASQQSLSANFNIDRFF---TILTKLSNLKVLSLVSLGLWGPLPSKIN-RFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~---~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 176 (640)
.+..++|+...+ ..++ ..+.....|+..+|++|.+. ..|+.|. .++.++.|+|++|.|+ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 344556666544 2233 34566778888899999994 5666665 4568999999999999 89999999999999
Q ss_pred EEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc-c-cccceeecccCcccccCCc
Q 006570 177 IVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL-S-KNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 177 L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~-~~L~~L~l~~N~l~~~~p~ 234 (640)
|+++.|.|...+..+..|.+|.+||..+|.+....-+. . .+.-...+.++.+.+.-|.
T Consensus 105 lNl~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 105 LNLRFNPLNAEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred cccccCccccchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccccCcc
Confidence 99999999887777777899999999988875443332 1 2222234455555554443
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.5e-06 Score=83.95 Aligned_cols=112 Identities=22% Similarity=0.274 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHhcCCCc--ccceeeeEEEecccCCCCCCCeEEEEEEccCCC-CHhHHhhccCCCCCCCHHHHHHHHHHH
Q 006570 491 PQSLMQHVELLSKLRHR--HLVSILGHCILTYQDHPNTGSTVFLVLEHISNG-SLRDYLTDWKKKDMLKWPQRMAIIIGA 567 (640)
Q Consensus 491 ~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~i 567 (640)
.....+|.+.+..+... .+.+.+++.... .. ....-++|+|++++- +|.+++... ...+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r--~~--~~~~s~lite~l~~~~~L~~~~~~~---~~~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERR--KG--GGYRSYLITEALPGAQDLRDLLQQW---EQLDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEc--CC--CceeEEEEEEeCCCcccHHHHHHhh---cccchhhHHHHHHHH
Confidence 34677888877777432 345566655421 11 123468999999874 899998642 125667788999999
Q ss_pred HHHhhhcccCCCCCeeccCCCCCceeecCCC---ceEEeCCCCCcccc
Q 006570 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKAL---TAKLSGYNIPLPSK 612 (640)
Q Consensus 568 a~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~DfGla~~~~ 612 (640)
+..++-||+ .+|+|+|+++.|||++.+. .+.++||+-++...
T Consensus 128 ~~~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 128 ARLIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 999999999 7999999999999999887 89999999887654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.3e-07 Score=62.91 Aligned_cols=38 Identities=24% Similarity=0.538 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCC-CC-CCCCCCCCC--CCCCCCCCCCcccEEeC
Q 006570 31 PSETRILFQVQKLLE-YP-EVLQGWTDW--TNFCYLPSSSSLKIVCT 73 (640)
Q Consensus 31 ~~~~~~l~~~k~~~~-~~-~~l~~W~~~--~~~C~~~~~~~~gv~C~ 73 (640)
++|++||++||+.+. +| ..+.+|+.+ ++||.|. ||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~-----GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWS-----GVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCST-----TEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeec-----cEEeC
Confidence 679999999999998 45 578999987 7999998 89995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-06 Score=94.21 Aligned_cols=142 Identities=16% Similarity=0.122 Sum_probs=92.2
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeeccc----------------------CC----C--------------hHHHH
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ----------------------RH----L--------------PQSLM 495 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~----~--------------~~~~~ 495 (640)
.+.|+.++-|.||+|++.+|+.||||+.+.+- .. . +-++.
T Consensus 130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 47899999999999999999999999986431 00 0 01244
Q ss_pred HHHHHHhcCC-----CcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 006570 496 QHVELLSKLR-----HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570 (640)
Q Consensus 496 ~E~~~l~~l~-----h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 570 (640)
+|...+.+++ .++ +.+=.++++ -.....|+|||++|-.+.+...-. ....+. ..++..++++
T Consensus 210 ~EA~n~~~~~~nf~~~~~-v~VP~V~we-------~t~~~VLtmE~i~Gi~i~d~~~l~--~~g~d~---k~ia~~~~~~ 276 (517)
T COG0661 210 REAANAERFRENFKDDPD-VYVPKVYWE-------YTTRRVLTMEWIDGIKISDIAALK--SAGIDR---KELAELLVRA 276 (517)
T ss_pred HHHHHHHHHHHHcCCCCC-eEeceeehh-------ccCCcEEEEEeeCCEecccHHHHH--hcCCCH---HHHHHHHHHH
Confidence 5555555542 333 233333331 123358999999998888874321 123442 2333333322
Q ss_pred h-h-hcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 571 V-Q-FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 571 L-~-yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
. . -++ .+++|.|..|.||+++.+++..+.|||+.......
T Consensus 277 f~~q~~~----dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 277 FLRQLLR----DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred HHHHHHh----cCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 1 1 122 38999999999999999999999999998876543
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.5e-08 Score=87.15 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=22.0
Q ss_pred cCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 231 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
.+|.++..++.|+.|+++.|.|. ..|..+..+.+|.+|+..+|.+
T Consensus 91 dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 91 DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCcc
Confidence 34444555555555555555554 3344444455555555555544
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.7e-07 Score=89.41 Aligned_cols=62 Identities=16% Similarity=0.124 Sum_probs=31.5
Q ss_pred CccEEEccCCcccCcC-CccccCCCCCcEEEccCCcCCccC-CccccCCCCCCEEeccCccCcc
Q 006570 241 QLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLSEAL-PVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 241 ~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
++..+-+..|.|...- -..+..++.+..|+|+.|+|...- -+++..++.|..|.+++|.+..
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 4444555555443211 122334555556666666664311 1234556666666677776653
|
|
| >PRK15386 type III secretion protein GogB; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.5e-06 Score=88.67 Aligned_cols=136 Identities=13% Similarity=0.178 Sum_probs=79.1
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc-cCCccCCCccCcCcCC
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN-LLNGSVPDLQRLVLLE 198 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~l~~L~ 198 (640)
+..+.+++.|++++|.++ .+|. + ..+|++|+++++.--..+|+.+. ++|+.|++++| .+...++ +|+
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~------sLe 115 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPE------SVR 115 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccccccc------ccc
Confidence 556788999999999874 5662 2 23699999987433347776553 58888888888 5554332 467
Q ss_pred eeEccCCCCCCCCCCcccccceeecccCccc--ccCCccccCC-CCccEEEccCCcccCcCCccccCCCCCcEEEccCC
Q 006570 199 ELNLGGNDFGPKFPSLSKNIVSVILRNNSLR--SEIPSGLKNF-DQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274 (640)
Q Consensus 199 ~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~--~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 274 (640)
.|+++.|... .++..+++|+.|.+.+++.. ..+|. .+ ++|++|++++|... .+|..+. .+|+.|+++.|
T Consensus 116 ~L~L~~n~~~-~L~~LPssLk~L~I~~~n~~~~~~lp~---~LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 116 SLEIKGSATD-SIKNVPNGLTSLSINSYNPENQARIDN---LISPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred eEEeCCCCCc-ccccCcchHhheecccccccccccccc---ccCCcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 7777766553 23344455666666433211 01111 12 35666666666644 2232222 35666666555
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=8.5e-06 Score=77.37 Aligned_cols=144 Identities=11% Similarity=0.065 Sum_probs=103.5
Q ss_pred cccCCccceEEEEeCCCcEEEEEEeecc---c---CCChHHHHHHHHHHhcCCCc--ccceeeeEEEecccCCCCCCCeE
Q 006570 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLK---Q---RHLPQSLMQHVELLSKLRHR--HLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 459 ig~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
-|+||-+.|++-.+. |..+=+|+-... . +.....|.+|...+.++... .+.++. ++.. . .. ...-.-
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~-~-k~-~~~~rA 100 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEA-V-KI-EGEWRA 100 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeee-e-cc-CCceEE
Confidence 356888889998774 456778876521 1 33567899999999988532 244444 2211 1 11 123346
Q ss_pred EEEEEccCC-CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc--eEEeCCCC
Q 006570 531 FLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--AKLSGYNI 607 (640)
Q Consensus 531 ~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--~kl~DfGl 607 (640)
+||+|-+++ -||.+++.+. ...+.+...+..+..++++.++-||+ .++.|+|+-+.||+++.++. ++++||--
T Consensus 101 ~LVTe~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 101 LLVTEDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEEEEeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 899997763 5899988642 23356777888999999999999999 79999999999999986666 99999987
Q ss_pred Cccc
Q 006570 608 PLPS 611 (640)
Q Consensus 608 a~~~ 611 (640)
++..
T Consensus 177 ~r~~ 180 (216)
T PRK09902 177 SRRR 180 (216)
T ss_pred cchh
Confidence 7643
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.3e-07 Score=105.75 Aligned_cols=177 Identities=19% Similarity=0.207 Sum_probs=118.9
Q ss_pred CCCCCcEeecccCc--CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCe
Q 006570 122 KLSNLKVLSLVSLG--LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEE 199 (640)
Q Consensus 122 ~l~~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~ 199 (640)
..+.|+.|-+..|. +....++.|..++.|++|||++|.=-+.+|..+++|-+|++|+|++..++..|+++.+|..|.+
T Consensus 543 ~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISHLPSGLGNLKKLIY 622 (889)
T ss_pred CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccccchHHHHHHhhhe
Confidence 34479999999986 5333344588899999999999987789999999999999999999999988888999999999
Q ss_pred eEccCCCCCCCCCCc---ccccceeecccCcc--cccCCccccCCCCccEEEccCCcccCcCCccccCCCCCc----EEE
Q 006570 200 LNLGGNDFGPKFPSL---SKNIVSVILRNNSL--RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSIL----YLN 270 (640)
Q Consensus 200 L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l--~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~ 270 (640)
||+..+.-...+|.. +.+|++|.+..-.. +...-..+.++.+|+.|....... .+-..+..++.|. .+.
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~ 700 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLS 700 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhh
Confidence 999998866555554 67888887755432 222223345555555555533332 1111122222222 233
Q ss_pred ccCCcCCccCCccccCCCCCCEEeccCccCc
Q 006570 271 LAGNQLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 271 l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
+.++.. ...+..+..+.+|+.|.+.+..++
T Consensus 701 ~~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 701 IEGCSK-RTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred hccccc-ceeecccccccCcceEEEEcCCCc
Confidence 223222 234455667777777777777665
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.4e-08 Score=105.85 Aligned_cols=106 Identities=22% Similarity=0.257 Sum_probs=87.5
Q ss_pred ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCc-cccCCCCCCEE
Q 006570 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV-NISCSAKLNFV 293 (640)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~L~~L 293 (640)
...|...+.+.|.+. ....++.-++.|+.|||++|+++.. +.+..++.|++|||++|+++. +|. ....+ .|+.|
T Consensus 163 Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc-~L~~L 237 (1096)
T KOG1859|consen 163 WNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGC-KLQLL 237 (1096)
T ss_pred hhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhh-hheee
Confidence 356778899999998 6778888899999999999999865 378899999999999999975 554 23333 49999
Q ss_pred eccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 294 EISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 294 ~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.+++|.++.. ..+.++.+|..||+++|++.+-
T Consensus 238 ~lrnN~l~tL--~gie~LksL~~LDlsyNll~~h 269 (1096)
T KOG1859|consen 238 NLRNNALTTL--RGIENLKSLYGLDLSYNLLSEH 269 (1096)
T ss_pred eecccHHHhh--hhHHhhhhhhccchhHhhhhcc
Confidence 9999998743 3467889999999999998764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 640 | ||||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-21 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 3e-21 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-20 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 8e-20 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-17 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-17 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-17 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-16 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 4e-09 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 5e-09 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-08 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 4e-08 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 9e-08 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 4e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 4e-07 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 5e-07 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 5e-07 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 5e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 5e-07 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 6e-07 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 6e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 6e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 7e-07 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 8e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 9e-07 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 1e-06 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-06 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-06 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-06 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-06 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-06 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-06 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-06 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 7e-06 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 1e-05 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-05 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 3e-05 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 4e-05 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 4e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 4e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 4e-05 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 4e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 4e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 5e-05 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-05 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 7e-05 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-05 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 8e-05 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 9e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 9e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 9e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 1e-04 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-04 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-04 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-04 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 1e-04 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-04 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 1e-04 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 1e-04 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-04 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 1e-04 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 1e-04 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 1e-04 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-04 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-04 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-04 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 1e-04 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 1e-04 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-04 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 1e-04 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 1e-04 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 1e-04 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 1e-04 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-04 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 1e-04 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 1e-04 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 1e-04 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-04 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 1e-04 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-04 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 2e-04 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 2e-04 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-04 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 2e-04 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-04 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-04 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-04 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 2e-04 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-04 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-04 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-04 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-04 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-04 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-04 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 2e-04 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-04 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 3e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 3e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 3e-04 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 3e-04 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 3e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 3e-04 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 3e-04 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 3e-04 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-04 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 3e-04 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 4e-04 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-04 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 4e-04 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-04 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 4e-04 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 4e-04 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-04 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 4e-04 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 4e-04 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 6e-04 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 6e-04 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 6e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 6e-04 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 7e-04 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 7e-04 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 7e-04 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 7e-04 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 7e-04 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 7e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 7e-04 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 7e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 7e-04 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 7e-04 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 8e-04 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 8e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 8e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 8e-04 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 8e-04 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 8e-04 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 9e-04 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 9e-04 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 9e-04 |
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 8e-45
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 421 SRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSV 480
+ + + S+ + L ++EEATNNFD LIG G G++YKG L DG++V++
Sbjct: 9 TNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVAL 68
Query: 481 KCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNG 540
K + + +E LS RH HLVS++G C + + L+ +++ NG
Sbjct: 69 KRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD--------ERNEMILIYKYMENG 120
Query: 541 SLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599
+L+ +L + W QR+ I IGA RG+ +LHT I ++K+ NILLD+
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177
Query: 600 AKLS 603
K++
Sbjct: 178 PKIT 181
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 2e-42
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 12/168 (7%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKL--KQRHLPQSLMQ 496
+ FSL E++ A++NF N++G G G++YKG L DG+ V+VK LK Q Q +
Sbjct: 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTE 77
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-KDML 555
VE++S HR+L+ + G C+ T + LV +++NGS+ L + + + L
Sbjct: 78 -VEMISMAVHRNLLRLRGFCM--------TPTERLLVYPYMANGSVASCLRERPESQPPL 128
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
WP+R I +G+ RG+ +LH P I ++K NILLD+ A +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 5e-40
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 26/187 (13%)
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDP------TNLIGEGSQGQLYKGFLTDGSRVSVKC 482
+S + F FS E++ TNNFD N +GEG G +YKG++ + + V+VK
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVK- 60
Query: 483 LKLKQRHLPQSL------MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEH 536
KL + Q +++++K +H +LV +LG G + LV +
Sbjct: 61 -KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS--------DGDDLCLVYVY 111
Query: 537 ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
+ NGSL D L+ L W R I GA G+ FLH I ++K+ NILLD+
Sbjct: 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--HHIH-RDIKSANILLDE 168
Query: 597 ALTAKLS 603
A TAK+S
Sbjct: 169 AFTAKIS 175
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 5e-35
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+++ NL+ L + S +P + +L+ L+IS N + G+ I++ LK + +
Sbjct: 196 VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSG 235
+ N G +P L L+ L+L N F + P + + L N +P
Sbjct: 255 SSNQFVGPIPP-LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313
Query: 236 LKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLSEALPVNIS-CSAKLNFV 293
+ L+ +SSNNF G + L + + L+L+ N+ S LP +++ SA L +
Sbjct: 314 FGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373
Query: 294 EISHNLLIGKLPSCIGSNSLN 314
++S N G + + N N
Sbjct: 374 DLSSNNFSGPILPNLCQNPKN 394
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 2e-33
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 93 PKPTFGKFSASQQ-SLSANFNIDRFFTILTKLS-NLKVLSLVSLGLWGPLPSKINRFW-- 148
P T K + LS N LT LS +L L L S GP+ + +
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEELNLGGNDF 207
+L+ L + +N G+IP +++ L S+ L+ N L+G++P L L L +L L N
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 208 GPKFPS---LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLP 264
+ P K + ++IL N L EIPSGL N L +S+N G I ++ L
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514
Query: 265 SILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
++ L L+ N S +P + L +++++ NL G +P+ + S
Sbjct: 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 4e-32
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPME-ITSLKNLKSI 177
+ L L L +G +P LE L +SSN GE+PM+ + ++ LK +
Sbjct: 289 LSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 348
Query: 178 VLADNLLNGSVPD--LQRLVLLEELNLGGNDF-GPKFPSLSK----NIVSVILRNNSLRS 230
L+ N +G +P+ L L+L N+F GP P+L + + + L+NN
Sbjct: 349 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 408
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290
+IP L N +L +S N G I S L SL + L L N L +P + L
Sbjct: 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 468
Query: 291 NFVEISHNLLIGKLPSCIGSNS 312
+ + N L G++PS + + +
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCT 490
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 7e-32
Identities = 75/315 (23%), Positives = 126/315 (40%), Gaps = 42/315 (13%)
Query: 30 TPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNK-SS 88
E L + +L +L W+ N C + C + +VT + + +
Sbjct: 10 LYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDG-----VTCRDDKVTSIDLSSKPLNV 64
Query: 89 PAHSPKPTFGKFSASQQ-SLSANF---NIDRF----------------------FTILTK 122
+ + + + LS + ++ F T L
Sbjct: 65 GFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS 124
Query: 123 LSNLKVLSLVSLGLWGPLP-SKINRFWSLEVLNISSNFIYGEIPMEIT---SLKNLKSIV 178
S LK L++ S L P S + SLEVL++S+N I G + LK +
Sbjct: 125 CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA 184
Query: 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGL 236
++ N ++G V + R V LE L++ N+F P L + + + N L + +
Sbjct: 185 ISGNKISGDVD-VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAI 243
Query: 237 KNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS-AKLNFVEI 295
+LK +ISSN FVGPI L S+ YL+LA N+ + +P +S + L +++
Sbjct: 244 STCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDL 301
Query: 296 SHNLLIGKLPSCIGS 310
S N G +P GS
Sbjct: 302 SGNHFYGAVPPFFGS 316
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 3e-29
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 10/213 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+ +NL +SL + L G +P I R +L +L +S+N G IP E+ ++L + L
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545
Query: 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRN-NSLRSEIPSGLK 237
NL NG++P + + N + N + L
Sbjct: 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLN 605
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
+I+S + G + S+++L+++ N LS +P I L + + H
Sbjct: 606 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 665
Query: 298 NLLIGKLPSCIGS----NSLNRTVVSTWNCLSG 326
N + G +P +G N L+ +S N L G
Sbjct: 666 NDISGSIPDEVGDLRGLNILD---LS-SNKLDG 694
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-23
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 26/213 (12%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP-------------- 165
+ +L NL +L L + G +P+++ SL L++++N G IP
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 166 ------MEITSLKNLKSIVLADNLLN--GSVP-DLQRLVLLEELNLGGNDFGPKFPSLSK 216
+ I + K A NLL G L RL N+ +G
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629
Query: 217 NIVSVI---LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG 273
N S++ + N L IP + + L ++ N+ G I + L + L+L+
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 274 NQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306
N+L +P +S L +++S+N L G +P
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 1e-21
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 12/187 (6%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
S+++ + N + + + SL L+S+ L+++ +NGSV + L L+L N
Sbjct: 54 SIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLS 113
Query: 209 PKFPSLS-----KNIVSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGPIQSFLF- 261
+L+ + + + +N+L SG + L+ D+S+N+ G
Sbjct: 114 GPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVL 173
Query: 262 --SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVS 319
+ +L ++GN++S + +S L F+++S N +P ++L +S
Sbjct: 174 SDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDIS 231
Query: 320 TWNCLSG 326
N LSG
Sbjct: 232 -GNKLSG 237
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 7e-08
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+ + L +L+L + G +P ++ L +L++SSN + G IP +++L L I L
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGND 206
++N L+G +P++ + N
Sbjct: 712 SNNNLSGPIPEMGQFETFPPAKFLNNP 738
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 2e-34
Identities = 63/311 (20%), Positives = 119/311 (38%), Gaps = 24/311 (7%)
Query: 31 PSETRILFQVQKLLEYPEVLQGWTDWTNFCY------LPSSSSLKIVCTNSRVTELTVIG 84
P + + L Q++K L P L W T+ C L + + RV L + G
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDT-----QTYRVNNLDLSG 59
Query: 85 NKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFT--I---LTKLSNLKVLSLVSLGLWGP 139
+ + N I + KL+ L L + + G
Sbjct: 60 LNLPKPYPIPSSLANLPYLNFLYIGGIN---NLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLV-LL 197
+P +++ +L L+ S N + G +P I+SL NL I N ++G++PD L
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF 176
Query: 198 EELNLGGNDF-GPKFPSLSK-NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGP 255
+ + N G P+ + N+ V L N L + + ++ ++ N+
Sbjct: 177 TSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236
Query: 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNR 315
+ + ++ L+L N++ LP ++ L+ + +S N L G++P +
Sbjct: 237 L-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDV 295
Query: 316 TVVSTWNCLSG 326
+ + CL G
Sbjct: 296 SAYANNKCLCG 306
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 21/174 (12%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM--Q 496
E + + + G G ++K L V+VK ++ + QS
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDK---QSWQNEY 67
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
V L ++H +++ +G + ++L+ GSL D+L K +++
Sbjct: 68 EVYSLPGMKHENILQFIGAEK----RGTSVDVDLWLITAFHEKGSLSDFL----KANVVS 119
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNN-------LKTENILLDKALTAKLS 603
W + I RG+ +LH + G+ +K++N+LL LTA ++
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 19/171 (11%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ--HV 498
+ E +N LIG G G +YKG L D V+VK R Q+ + ++
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNI 58
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+ + H ++ + D LV+E+ NGSL YL W
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRME---YLLVMEYYPNGSLXKYL----SLHTSDWV 111
Query: 559 QRMAIIIGATRGVQFLHTGVA------PGIFGNNLKTENILLDKALTAKLS 603
+ TRG+ +LHT + P I +L + N+L+ T +S
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 6e-23
Identities = 34/163 (20%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELL 501
SL I+ + ++G G+ G + K V++K +++ ++ + + L
Sbjct: 1 SLHMIDY--KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQL 55
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
S++ H ++V + G C+ LV+E+ GSL + L + M
Sbjct: 56 SRVNHPNIVKLYGACLNPV----------CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-AKLS 603
+ + ++GV +LH+ + +LK N+LL T K+
Sbjct: 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 3e-22
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHC 516
IG GS G +++ GS V+VK L + H ++ V ++ +LRH ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
PN + +V E++S GSL L ++ L +R+++ +G+ +LH
Sbjct: 104 T----QPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLS 603
P I NLK+ N+L+DK T K+
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVC 181
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 8e-22
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQH----VELLSKLRHRHLVSILG 514
+ E G+L+KG G+ + VK LK R + L H +++ +LG
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVK--VLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C H L+ + GSL + L + ++ Q + + RG+ FL
Sbjct: 75 ACQSPPAPH------PTLITHWMPYGSLYNVLHE-GTNFVVDQSQAVKFALDMARGMAFL 127
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLS 603
HT + P I + L + ++++D+ +TA++S
Sbjct: 128 HT-LEPLIPRHALNSRSVMIDEDMTARIS 155
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 1e-21
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 28/186 (15%)
Query: 431 AAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRH 489
A+G F L + + N + IG+G G ++KG + D S V++K L L
Sbjct: 1 GAMGGSEFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE 58
Query: 490 -------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
Q + V ++S L H ++V + G + P +V+E + G L
Sbjct: 59 GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH----NPPR------MVMEFVPCGDL 108
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA----- 597
L K +KW ++ +++ G++++ P I +L++ NI L
Sbjct: 109 YHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAP 165
Query: 598 LTAKLS 603
+ AK++
Sbjct: 166 VCAKVA 171
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 4e-21
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM-QHVELLSKLRHRHLVSILGH 515
IG+G G++++G G V+VK R + LRH +++ +
Sbjct: 48 ESIGKGRFGEVWRGKW-RGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
T + ++LV ++ +GSL DYL + + + + + G+ LH
Sbjct: 105 DN----KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLH 156
Query: 576 TGVA-----PGIFGNNLKTENILLDKALTAKLS 603
+ P I +LK++NIL+ K T ++
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 7e-21
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 17/153 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM-QHVELLSKLRHRHLVSILGH 515
+G+G G++++G G V+VK R + LRH +++ +
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVK--IFSSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ + ++L+ + GSL DYL + L + I++ G+ LH
Sbjct: 71 DMTSRHSSTQ----LWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 576 TGVA-----PGIFGNNLKTENILLDKALTAKLS 603
+ P I +LK++NIL+ K ++
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 96.5 bits (240), Expect = 8e-21
Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 24/230 (10%)
Query: 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG- 162
+ + + L +L + L + LP + L+ LNI+ N
Sbjct: 471 DANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISA 530
Query: 163 --------EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFP 212
+ + + ++ + N L LQ++V L L+ N
Sbjct: 531 AQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE 589
Query: 213 SLS--KNIVSVILRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVG-PIQSFLFSLPSILY 268
+ + + L N + EIP DQ++ S N P S+ +
Sbjct: 590 AFGTNVKLTDLKLDYNQI-EEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGS 648
Query: 269 LNLAGNQLSEALPVNISCS------AKLNFVEISHNLLIGKLPSCIGSNS 312
++ + N++ NISCS + V +S+N + + S
Sbjct: 649 VDFSYNKIGS-EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGS 697
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 3e-18
Identities = 30/211 (14%), Positives = 67/211 (31%), Gaps = 20/211 (9%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
FT + + + + + L + + + ++P + L L+S
Sbjct: 460 FTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519
Query: 177 IVLADNLLNGSV----------PDLQRLVLLEELNLGGNDFG--PKFPSLSK--NIVSVI 222
+ +A N + D ++ +G N+ P SL K + +
Sbjct: 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
+N + + + +L + N + F + L + N+L +P
Sbjct: 580 CVHNKV-RHLEA-FGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKY-IPN 636
Query: 283 NISCS--AKLNFVEISHNLLIGKLPSCIGSN 311
+ + V+ S+N IG I +
Sbjct: 637 IFNAKSVYVMGSVDFSYN-KIGSEGRNISCS 666
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 8e-16
Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 16/201 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L + LSL G G +P I + L+VL+ ++ +
Sbjct: 319 LDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEE 378
Query: 180 ADNLLNGSVPD--------LQRLVLLEELNLGGNDFGPKFPS--LSKNIVSVILRNNSLR 229
+ + L LL++ + P +S + N +
Sbjct: 379 RKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRIT 438
Query: 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAK 289
I ++ +L+ +++ F + N + E ++ S
Sbjct: 439 F-ISKAIQRLTKLQIIYFANSPFTYDNIAV-----DWEDANSDYAKQYENEELSWSNLKD 492
Query: 290 LNFVEISHNLLIGKLPSCIGS 310
L VE+ + + +LP +
Sbjct: 493 LTDVELYNCPNMTQLPDFLYD 513
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 1e-15
Identities = 32/222 (14%), Positives = 73/222 (32%), Gaps = 28/222 (12%)
Query: 120 LTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174
+ + + S G + + + +S N I + +
Sbjct: 640 AKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI 699
Query: 175 KSIVLADNLL--------NGSVPDLQRLVLLEELNLGGNDFGPKFPSLS----KNIVSVI 222
+I+L++NL+ + + LL ++L N + ++
Sbjct: 700 STIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMD 759
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDI------SSNNFVGPIQSFLFSLPSILYLNLAGNQL 276
+ N S P+ N QLK F I N + + + + PS++ L + N +
Sbjct: 760 VSYNCF-SSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818
Query: 277 SEALPVNISCSAKLNFVEISHN-LLIGKLPSCIGSNSLNRTV 317
+ + + + +L ++I+ N + + S V
Sbjct: 819 RK-VDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYV 857
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 4e-15
Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 31/229 (13%)
Query: 108 SANFNIDRFFTILTKLSNLKVL-----SLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG 162
+ R +++ +L P + + + L +L+ N +
Sbjct: 532 QLKADWTRLADDEDTGPKIQIFYMGYNNLEEF----PASASLQKMVKLGLLDCVHNKV-R 586
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PKFPSLS--K 216
+ + L + L N + +P+ +E L N P +
Sbjct: 587 HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVY 644
Query: 217 NIVSVILRNNSLRSEIPSGLKNFD-----QLKQFDISSNNFVGPIQSFLFSLPSILYLNL 271
+ SV N + SE + + D +S N + I + L
Sbjct: 645 VMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIIL 704
Query: 272 AGNQLSE-------ALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
+ N ++ N + L +++ N L L + +L
Sbjct: 705 SNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKL-TSLSDDFRATTL 752
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 9e-13
Identities = 24/179 (13%), Positives = 68/179 (37%), Gaps = 24/179 (13%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI--T 169
+ S + + L + P + L +++ N + + + T
Sbjct: 692 LFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKL-TSLSDDFRAT 750
Query: 170 SLKNLKSIVLADNLLN------GSVPDLQRLVLLEELNLGGNDFGPKFP-SLS--KNIVS 220
+L L ++ ++ N + + L+ + + + GN ++P ++ +++
Sbjct: 751 TLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQ 810
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSN-NFVGPIQSFLFSLPSILYLNLAGNQLSE 278
+ + +N + ++ L QL DI+ N N + S + + +Y+ L ++ +
Sbjct: 811 LQIGSNDI-RKVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYV-LLYDKTQD 865
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 7e-10
Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 14/190 (7%)
Query: 137 WGPLPSKINRFWSLEVLNISS--NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQR 193
W IN N + + + +++ + + + LA G VPD + +
Sbjct: 286 WRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQ 345
Query: 194 LVLLEELNLGGNDF---GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQ------LKQ 244
L L+ L+ G + G F R + +R ++DQ L Q
Sbjct: 346 LTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQ 405
Query: 245 FDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKL 304
I+ N + PI+ + N+++ + I KL + +++
Sbjct: 406 DAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTY-D 463
Query: 305 PSCIGSNSLN 314
+ N
Sbjct: 464 NIAVDWEDAN 473
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 107 LSANFNIDRFFTILTKLSNLKVLSLVSL------GLWGPLPSKINRFWSLEVLNISSNFI 160
+S N F T S LK + + P+ I SL L I SN I
Sbjct: 760 VSYN-CFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818
Query: 161 YGEIPMEITSLKNLKSIVLADN-LLNGSVPDLQRLVLLEELNLGGN 205
++ ++ L + +ADN ++ V + + L +
Sbjct: 819 -RKVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYD 861
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 2e-20
Identities = 31/227 (13%), Positives = 78/227 (34%), Gaps = 22/227 (9%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFI---- 160
++ L +L + + + LP+ + ++++N++ N
Sbjct: 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGE 289
Query: 161 ----YGEIPMEITSLKNLKSIVLADN-LLNGSVP-DLQRLVLLEELNLGGNDFGPKFPSL 214
+ + + ++ I + N L V LQ++ L L N K P+
Sbjct: 290 QLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAF 349
Query: 215 SK--NIVSVILRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLN 270
+ S+ L N + +EIP+ +Q++ + N P S+ + ++
Sbjct: 350 GSEIKLASLNLAYNQI-TEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAID 408
Query: 271 LAGNQLS-------EALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ N++ + L ++ + +S+N + +
Sbjct: 409 FSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFST 455
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 2e-20
Identities = 28/209 (13%), Positives = 71/209 (33%), Gaps = 17/209 (8%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
F + + + K + L + + + ++P + +L ++
Sbjct: 218 FVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277
Query: 177 IVLADNLLNG---------SVPDLQRLVLLEELNLGGNDF--GPKFPSLS--KNIVSVIL 223
I +A N ++ D ++ + +G N+ P SL K + +
Sbjct: 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLEC 337
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283
N L ++P+ + +L +++ N +F + L+ A N+L +P
Sbjct: 338 LYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKY-IPNI 395
Query: 284 ISCS--AKLNFVEISHNLLIGKLPSCIGS 310
+ ++ ++ S+N +
Sbjct: 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDP 424
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 7e-20
Identities = 39/217 (17%), Positives = 73/217 (33%), Gaps = 29/217 (13%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK 172
+S + + V + PL + ++ +N+S+N I ++
Sbjct: 398 AKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGS 457
Query: 173 NLKSIVLADNLLNG--------SVPDLQRLVLLEELNLGGNDFGPKFPSLS----KNIVS 220
L SI L N+L + + LL ++L N +V
Sbjct: 458 PLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVG 517
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDI------SSNNFVGPIQSFLFSLPSILYLNLAGN 274
+ L NS S+ P+ N LK F I N + + PS+ L + N
Sbjct: 518 IDLSYNSF-SKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSN 576
Query: 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311
+ + + I + ++ ++I N I S +
Sbjct: 577 DIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPY 610
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 6e-19
Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 16/201 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG----EIPMEITSLKNLK 175
L + LSL G G +P I + LEVL + S+ P I++ + +
Sbjct: 77 LNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDE 136
Query: 176 SIVLADNLLNGSVPD---LQRLVLLEELNLGGNDFGPKFPS---LSKNIVSVILRNNSLR 229
+ D + L + + + ++ + +N++
Sbjct: 137 QKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI- 195
Query: 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAK 289
+ + + +L+QF + ++ FV + N Q + +
Sbjct: 196 TFVSKAVMRLTKLRQFYMGNSPFVAENICEAWEN-----ENSEYAQQYKTEDLKWDNLKD 250
Query: 290 LNFVEISHNLLIGKLPSCIGS 310
L VE+ + + KLP+ + +
Sbjct: 251 LTDVEVYNCPNLTKLPTFLKA 271
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-15
Identities = 36/196 (18%), Positives = 63/196 (32%), Gaps = 20/196 (10%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFI-------YGEIPMEITSLK 172
K N+ ++L + + + L +N+ N + + +
Sbjct: 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTY 488
Query: 173 NLKSIVLADNLLNGSVPDLQ--RLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRN--- 225
L SI L N L D + L L ++L N F P P S + +RN
Sbjct: 489 LLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRD 548
Query: 226 ---NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
N E P G+ L Q I SN+ + P+I L++ N
Sbjct: 549 AQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKIT---PNISVLDIKDNPNISIDLS 605
Query: 283 NISCSAKLNFVEISHN 298
+ + + ++
Sbjct: 606 YVCPYIEAGMYMLFYD 621
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 5e-15
Identities = 21/178 (11%), Positives = 62/178 (34%), Gaps = 22/178 (12%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI--T 169
+ + S L ++L + + L +++ N + ++ + T
Sbjct: 452 LFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL-TKLSDDFRAT 510
Query: 170 SLKNLKSIVLADNLLN------GSVPDLQRLVLLEELNLGGNDFGPKFP-SLSK--NIVS 220
+L L I L+ N + + L+ + + + GN ++P ++ ++
Sbjct: 511 TLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQ 570
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278
+ + +N + ++ + + DI N + S++ L ++ +
Sbjct: 571 LQIGSNDI-RKVNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQD 625
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-20
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVE--LLSKLRHRHLVSILG 514
IG+G G+++ G G +V+VK + S + E +RH +++ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIA 98
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I + + ++L+ ++ NGSL DYL K L + + + G+ L
Sbjct: 99 ADI----KGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 575 HTGVA-----PGIFGNNLKTENILLDKALTAKLS 603
HT + P I +LK++NIL+ K T ++
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 4e-20
Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 6/199 (3%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+N+ VL+L L + R+ L L++ N I P L LK + L N
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 183 LLNGSVPD-LQRLVLLEELNLGGNDF-GPKFPSLS--KNIVSVILRNNSLRSEIPSGLKN 238
L+ L EL+L N K KN++++ L +N L S
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ 143
Query: 239 FDQLKQFDISSNNFVGPIQSFL--FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296
+ L++ +S+N L F+ S+ L L+ NQ+ E P +L + ++
Sbjct: 144 LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLN 203
Query: 297 HNLLIGKLPSCIGSNSLNR 315
+ L L + N
Sbjct: 204 NVQLGPSLTEKLCLELANT 222
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 8e-19
Identities = 36/225 (16%), Positives = 73/225 (32%), Gaps = 35/225 (15%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+NL L L+S + + + +L L++S N + L+NL+ +
Sbjct: 91 KTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150
Query: 178 VLADNLLNGSVPD---------LQRLVL------------------LEELNLGGNDFGPK 210
+L++N + + L++L L L L L GP
Sbjct: 151 LLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPS 210
Query: 211 FPSL------SKNIVSVILRNNSLRSEIPSGLKNFD--QLKQFDISSNNFVGPIQSFLFS 262
+ +I ++ L N+ L + + L D+S NN
Sbjct: 211 LTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAW 270
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSC 307
LP + Y L N + ++ + ++ + + +
Sbjct: 271 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 3e-18
Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 22/214 (10%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIYGEIPMEITSLK--N 173
+ L L L ++ L L K+ S+ L++S++ + LK N
Sbjct: 190 CFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTN 249
Query: 174 LKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS------------LSKNIVS 220
L + L+ N LN D L LE L N+ F L ++
Sbjct: 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280
+ SL + L+ ++ N+ G + L ++ YL+L+ + S
Sbjct: 310 QSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT 369
Query: 281 PVNISCS----AKLNFVEISHNLLIGKLPSCIGS 310
N + + L+ + ++ N +
Sbjct: 370 LTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-17
Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 15/194 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG--EIPMEITSLKNLKSI 177
L N+ + L + SL+ L + + P L+NL +
Sbjct: 426 WRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485
Query: 178 VLADNLLNGSVPD-LQRLVLLEELNLGGN-----------DFGPKFPSLSKNIVSVILRN 225
L++N + D L+ L LE L+L N F ++ + L +
Sbjct: 486 DLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLES 545
Query: 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285
N K+ +LK D+ NN S + S+ LNL N ++
Sbjct: 546 NGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFG 605
Query: 286 CSAK-LNFVEISHN 298
+ + L +++ N
Sbjct: 606 PAFRNLTELDMRFN 619
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-17
Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 15/193 (7%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP-MEITSLKNLKSIVLAD 181
S L +L+L + + LEVL++ N I E+ E L+N+ I L+
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 182 NLLNGSVPD-LQRLVLLEELNLGGNDFG--PKFPSLSKNIVS---VILRNNSLRSEIPSG 235
N + + L+ L L PS + + + + L NN++ +
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM 499
Query: 236 LKNFDQLKQFDISSNN--------FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
L+ ++L+ D+ NN G FL L + LNL N E
Sbjct: 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559
Query: 288 AKLNFVEISHNLL 300
+L +++ N L
Sbjct: 560 FELKIIDLGLNNL 572
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 5e-17
Identities = 41/187 (21%), Positives = 70/187 (37%), Gaps = 17/187 (9%)
Query: 107 LSANFNIDRFFTILTKLSNLKVLSLVSLGLWG--PLPSKINRFWSLEVLNISSNFIYGEI 164
LS N + + +L+ L L + L PS +L +L++S+N I
Sbjct: 437 LSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIN 496
Query: 165 PMEITSLKNLKSIVLADNLL---------NGSVPDLQRLVLLEELNLGGNDF---GPK-F 211
+ L+ L+ + L N L G + L+ L L LNL N F + F
Sbjct: 497 DDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLN 270
L + + L N+L + S N LK ++ N + F + ++ L+
Sbjct: 557 KDL-FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELD 615
Query: 271 LAGNQLS 277
+ N
Sbjct: 616 MRFNPFD 622
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 5e-15
Identities = 45/262 (17%), Positives = 87/262 (33%), Gaps = 26/262 (9%)
Query: 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFN-----IDRFFTILTKLSNLKVL 129
R+ L + + P+ + K + S ++LS + + + F L K +NL +L
Sbjct: 195 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL-KWTNLTML 253
Query: 130 SLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP 189
L L LE + N I + L N++ + L + S+
Sbjct: 254 DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS 313
Query: 190 D----------LQRLVLLEELNLGGN---DFGPKFPSLSKNIVSVILRNN-----SLRSE 231
Q L LE LN+ N + N+ + L N+ +L +E
Sbjct: 314 LASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNE 373
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN-ISCSAKL 290
L + L +++ N L + L+L N++ + L +
Sbjct: 374 TFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI 432
Query: 291 NFVEISHNLLIGKLPSCIGSNS 312
+ +S+N + +
Sbjct: 433 FEIYLSYNKYLQLTRNSFALVP 454
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-14
Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 25/190 (13%)
Query: 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL 184
+ +V L L +P + ++ VLN++ N + T L S+ + N +
Sbjct: 5 SHEVADCSHLKLTQ-VPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 185 NGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLK 243
+ P+ Q+L +L+ LNL +N L L
Sbjct: 62 SKLEPELCQKLPMLKVLNLQ---------------------HNELSQLSDKTFAFCTNLT 100
Query: 244 QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGK 303
+ + SN+ + +++ L+L+ N LS L + +S+N +
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160
Query: 304 LPSCIGSNSL 313
+ +
Sbjct: 161 KSEELDIFAN 170
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 29/136 (21%), Positives = 46/136 (33%), Gaps = 4/136 (2%)
Query: 195 VLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253
V E + + P L NI + L +N LR + + QL D+ N
Sbjct: 4 VSHEVADCSHLKLT-QVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS 62
Query: 254 GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS-NS 312
LP + LNL N+LS+ + L + + N + + +
Sbjct: 63 KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKN 122
Query: 313 LNRTVVSTWNCLSGVN 328
L +S N LS
Sbjct: 123 LITLDLS-HNGLSSTK 137
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 6e-09
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
L + N L LS+L +L+L S G + L+++++ N +
Sbjct: 517 ARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLP 576
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVL--LEELNLGGNDF 207
+ +LKS+ L NL+ + L EL++ N F
Sbjct: 577 ASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 621
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 5e-20
Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 17/153 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM----QHVELLSKLRHRHLVSILG 514
IG G G++Y+ F G V+VK + + Q +L + L+H +++++ G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C+ PN + LV+E G L L + + + RG+ +L
Sbjct: 74 VCL----KEPN----LCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYL 121
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H I +LK+ NIL+ + + I
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-19
Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 26/232 (11%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVL-------------------SLVSLGLWGPLPSKIN 145
S S + + L L G
Sbjct: 285 SSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 344
Query: 146 RFWSLEVLNISSNFIY--GEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203
SLE L++S N + G +LK + L+ N + + L LE L+
Sbjct: 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQ 404
Query: 204 GNDFGPKFP----SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF 259
++ +N++ + + + R L+ ++ N+F
Sbjct: 405 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 464
Query: 260 LFS-LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+F+ L ++ +L+L+ QL + P + + L + +SHN
Sbjct: 465 IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 516
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-19
Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 10/197 (5%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
+ K L L L F L+VL++S I SL +L +++L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 184 LNGSVPD-LQRLVLLEELNLGGNDF-GPKFPSLS--KNIVSVILRNNSLRS-EIPSGLKN 238
+ L L++L + + + K + + + +N ++S ++P N
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 239 FDQLKQFDISSNNFVGPIQSFLFSLPSI----LYLNLAGNQLSEALPVNISCSAKLNFVE 294
L+ D+SSN + L L + L L+L+ N ++ P +L+ +
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLT 206
Query: 295 ISHNLLIGKLPSCIGSN 311
+ +N +
Sbjct: 207 LRNNFDSLNVMKTCIQG 223
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-19
Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 8/190 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
++LK L L G+ + S LE L+ + + + SL+NL +
Sbjct: 369 DFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 427
Query: 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFG----PKFPSLSKNIVSVILRNNSLRSEIP 233
++ + L LE L + GN F P + +N+ + L L P
Sbjct: 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCSAKLNF 292
+ + L+ ++S NNF L S+ L+ + N + + + + L F
Sbjct: 488 TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 547
Query: 293 VEISHNLLIG 302
+ ++ N
Sbjct: 548 LNLTQNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 8e-19
Identities = 39/192 (20%), Positives = 67/192 (34%), Gaps = 9/192 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+VL L + L L ++ N I + L +L+ +V
Sbjct: 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107
Query: 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFG----PKFPSLSKNIVSVILRNNSLRSEIPS 234
+ L + L L+ELN+ N P++ S N+ + L +N ++S +
Sbjct: 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
Query: 235 GLKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQLS-EALPVNISCSAKL 290
L+ Q+ ++S S N + IQ F + L L N S + I A L
Sbjct: 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGL 227
Query: 291 NFVEISHNLLIG 302
+
Sbjct: 228 EVHRLVLGEFRN 239
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 2e-18
Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 9/216 (4%)
Query: 103 SQQSLSANFNIDRFFTILTKLSNLKVLSLV--SLGLWGPLPSKINRFWSLEVLNISSNFI 160
S + L+ N L +L+ L L L G SL+ L++S N +
Sbjct: 326 SLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385
Query: 161 YGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSL---S 215
+ L+ L+ + + L L L L++ F +
Sbjct: 386 IT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 444
Query: 216 KNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
++ + + NS + L D+S + SL S+ LN++ N
Sbjct: 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
C L ++ S N ++ +
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 540
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 1e-17
Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 13/208 (6%)
Query: 110 NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
++ +D + L+N+ SLVS+ + + + + L + + G+ P
Sbjct: 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKF-GQFPTL-- 322
Query: 170 SLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDF-----GPKFPSLSKNIVSVILR 224
LK+LK + N + L LE L+L N + + ++ + L
Sbjct: 323 KLKSLKRLTFTSNKGGNA-FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS 381
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLSEALPVN 283
N + + S +QL+ D +N S SL +++YL+++ A
Sbjct: 382 FNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 440
Query: 284 ISCSAKLNFVEISHNLLIGKLPSCIGSN 311
+ + L ++++ N I +
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTE 468
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 4e-16
Identities = 42/221 (19%), Positives = 73/221 (33%), Gaps = 16/221 (7%)
Query: 106 SLSAN-FNIDRFFTILTKLSNLKVLSLVS---LGLWGPLPSKINRFWSLEVLNISSN--- 158
+L N +++ T + L+ L+V LV + L L I
Sbjct: 206 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265
Query: 159 ---FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS 215
+ +I L N+ S L + V D + L L FG
Sbjct: 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKL 324
Query: 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN--NFVGPIQSFLFSLPSILYLNLAG 273
K++ L S + + L+ D+S N +F G F S+ YL+L+
Sbjct: 325 KSLKR--LTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSF 382
Query: 274 NQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
N + + N +L ++ H+ L + + N
Sbjct: 383 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 422
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 7e-16
Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 20/253 (7%)
Query: 74 NSRVTELTVIGNKSSPAHSPKPTFGKFSASQQ---SLSANFNIDRFFTI-LTKLSNLKVL 129
R+ +LT+ N S + K + + L N + L L L
Sbjct: 199 EIRLHKLTLRNNFDSL-NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 130 SLVSLGL------WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
++ L + N ++ ++ S I + + + L +
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCK 315
Query: 184 LNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS-KNIVSVILRNNSL--RSEIPSGLKNFD 240
L L+ L N G F + ++ + L N L +
Sbjct: 316 FGQFPTLK--LKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTT 373
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS-AKLNFVEISHNL 299
LK D+S N + +FL L + +L+ + L + ++ S L +++ISH
Sbjct: 374 SLKYLDLSFNGVITMSSNFL-GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 432
Query: 300 LIGKLPSCIGSNS 312
S
Sbjct: 433 TRVAFNGIFNGLS 445
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 1e-12
Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 30/220 (13%)
Query: 106 SLSAN----FNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEV----LNISS 157
+++ N F + +F+ L+NL+ L L S + + + + + L++S
Sbjct: 130 NVAHNLIQSFKLPEYFS---NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186
Query: 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG------- 208
N + I L + L +N + +V +Q L LE L +F
Sbjct: 187 NPM-NFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245
Query: 209 ---PKFPSLSKNIVSV--ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFS 262
L + + + +I + F + S S+ F
Sbjct: 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFG 305
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302
+L L + + + + +L F
Sbjct: 306 W---QHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFS 342
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 4e-09
Identities = 20/99 (20%), Positives = 32/99 (32%)
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNL 271
+L + ++ L N LR +F +L+ D+S SL + L L
Sbjct: 24 DNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLIL 83
Query: 272 AGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
GN + S + L + L IG
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGH 122
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 2e-19
Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH 506
F P++L +G+G GQ K G + +K L ++ ++ V+++ L H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ +G Y+D + + E+I G+LR + W QR++
Sbjct: 67 PNVLKFIGVL---YKDKR-----LNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKD 116
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+ +LH + I +L + N L+ + ++
Sbjct: 117 IASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVA 150
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 4e-18
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHC 516
IG GS G +YKG V+VK L + Q+ V +L K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
T + +V + SL +L + + + + I RG+ +LH
Sbjct: 90 ---------TAPQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLH- 137
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLS 603
A I +LK+ NI L + T K+
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIG 162
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 4e-18
Identities = 46/234 (19%), Positives = 82/234 (35%), Gaps = 18/234 (7%)
Query: 91 HSPKPTFGKFSASQ-QSLSANFNIDRFFTI----LTKLSNLKVLSLVSLGLWGPLPSKIN 145
F +S++ + FF I S L+ L L + L LPS +
Sbjct: 242 DISPAVFEGLCEMSVESINLQKH--YFFNISSNTFHCFSGLQELDLTATHL-SELPSGLV 298
Query: 146 RFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLG 203
+L+ L +S+N + ++ +L + + N + L+ L L EL+L
Sbjct: 299 GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLS 358
Query: 204 GNDF------GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PI 256
+D + +LS ++ S+ L N S K QL+ D++
Sbjct: 359 HDDIETSDCCNLQLRNLS-HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDA 417
Query: 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
QS +L + LNL+ + L + L + + N S
Sbjct: 418 QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNS 471
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 2e-16
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 12/206 (5%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
L+A ++ + L LS LK L L + + F SL L+I N E+
Sbjct: 284 DLTAT-HLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELG 342
Query: 166 ME-ITSLKNLKSIVLADNLLNGSVPD---LQRLVLLEELNLGGNDFG---PKFPSLSKNI 218
+ +L+NL+ + L+ + + S L+ L L+ LNL N+ + +
Sbjct: 343 TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQL 402
Query: 219 VSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ L L+ + +N LK ++S + + LP++ +LNL GN
Sbjct: 403 ELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP 462
Query: 278 EALPVNISCSA---KLNFVEISHNLL 300
+ + +L + +S L
Sbjct: 463 KGNIQKTNSLQTLGRLEILVLSFCDL 488
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 5e-15
Identities = 37/222 (16%), Positives = 76/222 (34%), Gaps = 16/222 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIY--GEIPMEITSLKNL 174
+ +L LS+ L + +L L++S + I +++ +L +L
Sbjct: 321 ASNFPSLTHLSIKGNTKRLELGTGC--LENLENLRELDLSHDDIETSDCCNLQLRNLSHL 378
Query: 175 KSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVILRNNSLR 229
+S+ L+ N + + LE L+L + + L ++ L
Sbjct: 379 QSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD 438
Query: 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQ---SFLFSLPSILYLNLAGNQLSEALPVNISC 286
L+ ++ N+F + L +L + L L+ LS +
Sbjct: 439 ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498
Query: 287 SAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328
+N V++SHN L S+ + N +S +
Sbjct: 499 LKMMNHVDLSHNRLTS-SSIEALSHLKGIYLNLASNHISIIL 539
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 8e-15
Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Query: 107 LSANF--NIDRFFTILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISS 157
LS + D L LS+L+ L+L + + P LE+L+++
Sbjct: 357 LSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ-------LELLDLAF 409
Query: 158 NFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFG------- 208
+ + +L LK + L+ +LL+ S L L+ LNL GN F
Sbjct: 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT 469
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILY 268
+L + ++L L S + + D+S N S +Y
Sbjct: 470 NSLQTLG-RLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHLKGIY 527
Query: 269 LNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
LNLA N +S LP + ++ + + N L
Sbjct: 528 LNLASNHISIILPSLLPILSQQRTINLRQNPL 559
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 5/176 (2%)
Query: 147 FWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN 205
S E L S N + + L NL + L + D Q L+ L L N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 206 ---DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262
S K + + + S L N L+ + SN+ F
Sbjct: 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP 151
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS-HNLLIGKLPSCIGSNSLNRTV 317
+ L+ N + ++S + + ++ + I + +++ +++
Sbjct: 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSL 207
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 11/192 (5%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178
L+ LK L + G+ ++ +LE L + SN I + + LK +
Sbjct: 100 ALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLD 159
Query: 179 LADNLLNGSVPD----LQRLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSEI 232
+N ++ + LQ+ L LNL GND S S+ I
Sbjct: 160 FQNNAIHYLSKEDMSSLQQATNL-SLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVI 218
Query: 233 PSGLKN--FDQLKQFDISSNNFVGPIQSFLFSLP--SILYLNLAGNQLSEALPVNISCSA 288
GLKN L + + L S+ +NL + C +
Sbjct: 219 FKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFS 278
Query: 289 KLNFVEISHNLL 300
L ++++ L
Sbjct: 279 GLQELDLTATHL 290
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 6e-13
Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 12/193 (6%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI--TSLKNL 174
+ L + +NL L+L + G + + LN I + +++++L
Sbjct: 173 MSSLQQATNLS-LNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSL 230
Query: 175 KSIVLADNLLNGSVPDL---QRLVLLEELNLGGNDF---GPKFPSLSKNIVSVILRNNSL 228
D P + + +E +NL + F + + L L
Sbjct: 231 WLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL 290
Query: 229 RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS- 287
SE+PSGL LK+ +S+N F Q + PS+ +L++ GN L +
Sbjct: 291 -SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENL 349
Query: 288 AKLNFVEISHNLL 300
L +++SH+ +
Sbjct: 350 ENLRELDLSHDDI 362
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 6e-09
Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 30/172 (17%)
Query: 119 ILTKLSNLKVLSLVS---LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLK 175
+ L L+ L+L + + LE+L +S + TSLK +
Sbjct: 444 LFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503
Query: 176 SIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSG 235
+ L+ N L S + L ++ L +N + +PS
Sbjct: 504 HVDLSHNRLTSSSIEA-------------------LSHLKGIYLN--LASNHISIILPSL 542
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
L Q + ++ N ++ + + +L + + C
Sbjct: 543 LPILSQQRTINLRQNPLDCTCS----NIYFLEWYKENMQKLED--TEDTLCE 588
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILG 514
LIG+G GQ+Y G V+++ + +++ + ++ + V + RH ++V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C+ P+ + ++ +L + K +L + I +G+ +L
Sbjct: 97 ACM----SPPH----LAIITSLCKGRTLYSVV--RDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 575 HTGVAPGIFGNNLKTENILLDK 596
H A GI +LK++N+ D
Sbjct: 147 H---AKGILHKDLKSKNVFYDN 165
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-18
Identities = 28/153 (18%), Positives = 62/153 (40%), Gaps = 9/153 (5%)
Query: 452 NFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
++ +GEG + L DG ++K + ++ + + ++ H +++
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATR 569
++ +C+ +L+L G+L + + K + L Q + +++G R
Sbjct: 90 RLVAYCL----RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G++ +H G +LK NILL L
Sbjct: 146 GLEAIHA---KGYAHRDLKPTNILLGDEGQPVL 175
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 2e-16
Identities = 30/180 (16%), Positives = 50/180 (27%), Gaps = 7/180 (3%)
Query: 105 QSLSANFN-IDRFFTILTKLSNLKVLSLVSLGLWG-PLPSKINRFWSLEVLNISSNFIYG 162
+ L +FN L L+ L L S L L+IS
Sbjct: 379 RHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPKFPSLSKN 217
+ L +L ++ +A N + L L+L
Sbjct: 439 DFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHR 498
Query: 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ + + +N+L S L D S N S+ + NL N ++
Sbjct: 499 LQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 3e-14
Identities = 40/204 (19%), Positives = 77/204 (37%), Gaps = 14/204 (6%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
++S ++ + K + LS++ L P+ L+ L ++ N I
Sbjct: 288 SAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPT--LDLPFLKSLTLTMNKG--SI 342
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPD---LQRLVLLEELNLGGND---FGPKFPSLSKNI 218
+ +L +L + L+ N L+ S L L+L N F L +
Sbjct: 343 SFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLE-EL 401
Query: 219 VSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ ++++L+ S + ++L DIS N L S+ L +AGN
Sbjct: 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFK 461
Query: 278 EALPVNISCSA-KLNFVEISHNLL 300
+ N+ + L F+++S L
Sbjct: 462 DNTLSNVFANTTNLTFLDLSKCQL 485
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 1e-13
Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 9/204 (4%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLW--GPLPSKINRFWSLEVLNISSNFIYG 162
+SL+ N L +L L L L G SL L++S N
Sbjct: 331 KSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI- 389
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFPSL---SKN 217
+ L+ L+ + + L L L L++ + F + +
Sbjct: 390 IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTS 449
Query: 218 IVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276
+ ++ + NS + S N L D+S +L + LN++ N L
Sbjct: 450 LNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509
Query: 277 SEALPVNISCSAKLNFVEISHNLL 300
+ + L+ ++ S N +
Sbjct: 510 LFLDSSHYNQLYSLSTLDCSFNRI 533
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 5e-13
Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 11/183 (6%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198
+P I S + +++S N + ++ L+ + L+ + L L
Sbjct: 26 VPDDI--PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83
Query: 199 ELNLGGN---DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG- 254
L L GN F P S ++ +++ L S + LK+ +++ N
Sbjct: 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC 143
Query: 255 PIQSFLFSLPSILYLNLAGNQLS----EALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ ++ +L ++++++L+ N + L +++S N +
Sbjct: 144 KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG 203
Query: 311 NSL 313
L
Sbjct: 204 IKL 206
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 1e-12
Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 13/166 (7%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
L +L L L + P + SLE L + I L LK + +A N
Sbjct: 79 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 138
Query: 183 LLNGSVPD--LQRLVLLEELNLGGN--------DFGPKFPSLSKNIVSVILRNNSLRSEI 232
++ L L ++L N D + +S+ + N +
Sbjct: 139 FIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF-LRENPQVNLSLDMSLNPIDFIQ 197
Query: 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLS 277
+ +L + + N I L + L +
Sbjct: 198 DQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFK 242
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 4e-12
Identities = 41/211 (19%), Positives = 72/211 (34%), Gaps = 18/211 (8%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG-EIPMEITSLKNLKSIV 178
+ L++L+ L V L I + +L+ LN++ NFI+ ++P ++L NL +
Sbjct: 100 FSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVD 159
Query: 179 LADNLLNGSVP-DLQRL----VLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSE 231
L+ N + DLQ L + L++ N + + LR N S
Sbjct: 160 LSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSN 219
Query: 232 IPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLP--------SILYLNLAGNQLSEALPV 282
I L+N L + F +F +I L V
Sbjct: 220 IMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIV 279
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
C A ++ + ++ I L
Sbjct: 280 KFHCLANVSAMSLAGV-SIKYLEDVPKHFKW 309
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 3e-16
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 443 LEEIEEATNNFDPTN-------LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQ 492
+EE+E IG GS +YKG V+ L+ ++ + Q
Sbjct: 11 IEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ 70
Query: 493 SLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK 552
+ E+L L+H ++V ++ + LV E +++G+L+ YL +K
Sbjct: 71 RFKEEAEMLKGLQHPNIVRFYDS----WESTVKGKKCIVLVTELMTSGTLKTYLKRFKV- 125
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
+K + +G+QFLHT P I +LK +NI +
Sbjct: 126 --MKIKVLRSWCRQILKGLQFLHTRTPPIIHR-DLKCDNIFIT 165
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 1e-15
Identities = 38/210 (18%), Positives = 78/210 (37%), Gaps = 24/210 (11%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+ K+ + L L S W+++ L++S N + ++ L+ + L+ N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSL-----SKNIVSVI------------L 223
+L DL+ L L L+L N PS+ + N +S + L
Sbjct: 69 VLY-ETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYL 127
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSEALPV 282
NN + +++ D+ N S ++ +LNL N + + +
Sbjct: 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG 186
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNS 312
+ + KL +++S N + + S +
Sbjct: 187 QVVFA-KLKTLDLSSN-KLAFMGPEFQSAA 214
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 4e-08
Identities = 31/186 (16%), Positives = 55/186 (29%), Gaps = 34/186 (18%)
Query: 120 LTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174
S ++ L L ++ +LE LN+ NFIY ++ ++ L
Sbjct: 140 EGCRSRVQYLDLKLNEIDTV----NFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKL 193
Query: 175 KSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234
K++ L+ N L P+ Q + ++L N I
Sbjct: 194 KTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL----------------------VLIEK 231
Query: 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVE 294
L+ L+ FD+ N F FS + +A + + N
Sbjct: 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV-QTVAKQTVKKLTGQNEEECTVPTLGH 290
Query: 295 ISHNLL 300
Sbjct: 291 YGAYCC 296
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 19/179 (10%), Positives = 55/179 (30%), Gaps = 8/179 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+ + +SL + L + + +LE ++ N + + S V
Sbjct: 210 FQSAAGVTWISLRNNKL-VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA 268
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS-------EI 232
+ + + + + + G + ++++ + ++L S +
Sbjct: 269 KQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERL 328
Query: 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291
+N + ++ D + I + + L L E + A+L+
Sbjct: 329 ECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELD 387
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 24/212 (11%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178
I + K+ + L L S W+++ L++S N + ++ L+ +
Sbjct: 5 IKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLN 64
Query: 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSL-----SKNIVSVI--------- 222
L+ N+L DL+ L L L+L N PS+ + N +S +
Sbjct: 65 LSSNVLY-ETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKK 123
Query: 223 ---LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSE 278
L NN + +++ D+ N S ++ +LNL N + +
Sbjct: 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183
Query: 279 ALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ + + KL +++S N L + S
Sbjct: 184 -VKGQVVFA-KLKTLDLSSNKLA-FMGPEFQS 212
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-08
Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 37/193 (19%)
Query: 120 LTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174
S ++ L L ++ +LE LN+ NFIY ++ ++ L
Sbjct: 140 EGCRSRVQYLDLKLNEIDTV----NFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKL 193
Query: 175 KSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234
K++ L+ N L P+ Q + ++L N I
Sbjct: 194 KTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL----------------------VLIEK 231
Query: 235 GLKNFDQLKQFDISSNNFV-GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
L+ L+ FD+ N F G ++ F + + + L + +
Sbjct: 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKK---LTGQNEEECTVPTL 288
Query: 294 EISHNLLIGKLPS 306
LP+
Sbjct: 289 GHYGAYCCEDLPA 301
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+LS+L+ +++ + GL LP + +F LE L ++ N + +P I SL L+ + +
Sbjct: 100 AFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNPL-RALPASIASLNRLRELSI 157
Query: 180 ADNLLNGSVPD----------LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI------L 223
+P+ Q LV L+ L L SL +I ++ +
Sbjct: 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWT----GIRSLPASIANLQNLKSLKI 213
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG-NQLSEALPV 282
RN+ L + + + + +L++ D+ + + L L + L LP+
Sbjct: 214 RNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT-LPL 271
Query: 283 NISCSAKLNFVEISHNLLIGKLPSCIGS 310
+I +L +++ + + +LPS I
Sbjct: 272 DIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 3e-12
Identities = 28/170 (16%), Positives = 48/170 (28%), Gaps = 12/170 (7%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
E L + + L + AD S + G
Sbjct: 13 GRENLYFQGST---ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRAL- 68
Query: 209 PKFPSL-----SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263
L V++ LR+ L P L+ I + + + +
Sbjct: 69 KATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLME-LPDTMQQF 126
Query: 264 PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
+ L LA N L LP +I+ +L + I + +LP + S
Sbjct: 127 AGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDA 175
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 31/190 (16%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW---------SLEVLNISSNFIYGEIPMEITS 170
+ L+ L+ LS+ + LP + +L+ L + I +P I +
Sbjct: 146 IASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204
Query: 171 LKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230
L+NLKS+ + ++ L+ P + L LEEL+L G +LR+
Sbjct: 205 LQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRG--------------------CTALRN 244
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290
P LK+ + + + + + L + L+L G LP I+
Sbjct: 245 -YPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303
Query: 291 NFVEISHNLL 300
+ + +L
Sbjct: 304 CIILVPPHLQ 313
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 6e-09
Identities = 30/168 (17%), Positives = 52/168 (30%), Gaps = 12/168 (7%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
L L NL+ L L G+ LP+ I +L+ L I ++ + +
Sbjct: 164 TELPEPLASTDASGEHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPL-SAL 221
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNI----- 218
I L L+ + L + P L+ L L +L +I
Sbjct: 222 GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCS---NLLTLPLDIHRLTQ 278
Query: 219 -VSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS 265
+ LR S +PS + + + Q + P+
Sbjct: 279 LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVARPA 326
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 3e-15
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 458 LIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGH 515
++ EG +Y+ + G ++K L + ++++Q V + KL H ++V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ ++ +TG FL+L + G L ++L + + L + I R VQ +H
Sbjct: 95 ASIGKEE-SDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKL 602
P I +LK EN+LL T KL
Sbjct: 154 R-QKPPIIHRDLKVENLLLSNQGTIKL 179
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 1e-14
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
++F+ ++G+G+ GQ+ K D ++K ++ + L +++ V LL+ L H++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQY 63
Query: 509 LVSILG-----HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
+V + ST+F+ +E+ NG+L D + +++ +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWR 120
Query: 564 IIG-ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ + ++H + GI +LK NI +D++ K+
Sbjct: 121 LFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIG 158
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-14
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
++G+G+ G +Y G L++ R+++K + + Q L + + L L+H+++V LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR----GVQ 572
+ + +E + GSL L + I T+ G++
Sbjct: 89 S--------ENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLK 136
Query: 573 FLHTGVAPGIFGNNLKTENILLD 595
+LH I ++K +N+L++
Sbjct: 137 YLHDN---QIVHRDIKGDNVLIN 156
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 3e-14
Identities = 33/186 (17%), Positives = 74/186 (39%), Gaps = 18/186 (9%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIYGEIPMEITSLKNLKS 176
+ L++L LSL + I+ SL N I P + ++ L S
Sbjct: 173 IANLTDLYSLSLNYNQI-----EDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNS 225
Query: 177 IVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPS 234
+ + +N + + L L L L +G N ++ + + + +N + S
Sbjct: 226 LKIGNNKIT-DLSPLANLSQLTWLEIGTNQIS-DINAVKDLTKLKMLNVGSNQISD--IS 281
Query: 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVE 294
L N QL +++N + L ++ L L+ N +++ P ++ +K++ +
Sbjct: 282 VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339
Query: 295 ISHNLL 300
++ ++
Sbjct: 340 FANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 6e-13
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 14/178 (7%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
SLS N+N + L L++L + + P + L L I +N I
Sbjct: 180 YSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLS 237
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVI 222
P + +L L + + N ++ + ++ L L+ LN+G N L+ + S+
Sbjct: 238 P--LANLSQLTWLEIGTNQIS-DINAVKDLTKLKMLNVGSNQIS-DISVLNNLSQLNSLF 293
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSE 278
L NN L +E + L +S N I L SL + + A + +
Sbjct: 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQN----HITDIRPLASLSKMDSADFANQVIKK 347
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 6e-12
Identities = 31/183 (16%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+ L L L + + + S + +L L ++ + I P + +L + S+ L
Sbjct: 84 LSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNL 139
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLK 237
N + L + L L + + ++ ++ S+ L N + P L
Sbjct: 140 GANHNLSDLSPLSNMTGLNYLTVTESKVK-DVTPIANLTDLYSLSLNYNQIEDISP--LA 196
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
+ L F N + + ++ + L + N++++ P ++ ++L ++EI
Sbjct: 197 SLTSLHYFTAYVNQITDI--TPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGT 252
Query: 298 NLL 300
N +
Sbjct: 253 NQI 255
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 7e-12
Identities = 37/189 (19%), Positives = 73/189 (38%), Gaps = 25/189 (13%)
Query: 131 LVSLGLWGPLPSKINRFW------SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL 184
+L LP+ IN+ + + + + L+++ +V+A +
Sbjct: 2 AATLAT---LPAPINQIFPDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKV 56
Query: 185 NGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLKNFDQL 242
S+ ++ L LE LNL GN LS + ++ + N + S L+N L
Sbjct: 57 A-SIQGIEYLTNLEYLNLNGNQIT-DISPLSNLVKLTNLYIGTNKI--TDISALQNLTNL 112
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL-- 300
++ ++ +N S L +L + LNL N +S LN++ ++ + +
Sbjct: 113 RELYLNEDNISDI--SPLANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKD 169
Query: 301 ---IGKLPS 306
I L
Sbjct: 170 VTPIANLTD 178
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-14
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+F LIG G GQ++K DG +K +K + + V+ L+KL H ++
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66
Query: 510 VSILGH--------CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
V G + + +F+ +E G+L ++ ++ + L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDKVLAL 125
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ T+GV ++H+ + +LK NI L K+
Sbjct: 126 ELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKI 163
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 5e-14
Identities = 28/157 (17%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRH 506
NF IG G ++Y+ L DG V++K +++ ++ ++LL +L H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD-MLKWPQRMAIII 565
+ ++ Y + + +VLE G L + +KK+ ++ +
Sbjct: 92 PN--------VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
++ +H + + ++K N+ + KL
Sbjct: 144 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKL 177
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 5e-14
Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 25/188 (13%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+++ L + L LP+ L L +S N + +P+ L L
Sbjct: 60 PAHITTLVIPDNNL-TSLPALPP---ELRTLEVSGNQLT-SLPVLPPGLLELSIFSNPLT 114
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242
L L +L + GN P L + + + +N L + +P+ L
Sbjct: 115 HLPALPSGLC------KLWIFGNQLT-SLPVLPPGLQELSVSDNQL-ASLPALPSE---L 163
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302
+ +N + S + L+++ NQL+ LP S +L + +N L
Sbjct: 164 CKLWAYNNQ----LTSLPMLPSGLQELSVSDNQLAS-LPTLPS---ELYKLWAYNNRLT- 214
Query: 303 KLPSCIGS 310
LP+
Sbjct: 215 SLPALPSG 222
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 2e-13
Identities = 47/223 (21%), Positives = 78/223 (34%), Gaps = 28/223 (12%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
Q LS + N + ++ S L L + L LP + L+ L++S N + +
Sbjct: 144 QELSVSDN--QLASLPALPSELCKLWAYNNQLTS-LPMLPS---GLQELSVSDNQL-ASL 196
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILR 224
P + L L +N L S+P L L+EL + GN P L + +++
Sbjct: 197 PTLPSELYKLW---AYNNRLT-SLPAL--PSGLKELIVSGNRLT-SLPVLPSELKELMVS 249
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF---LFSLPSILYLNLAGNQLSEALP 281
N L S +P L + N + L L S +NL GN LSE
Sbjct: 250 GNRLTS-LPMLPSG---LLSLSVYRNQ----LTRLPESLIHLSSETTVNLEGNPLSE-RT 300
Query: 282 VNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCL 324
+ ++ +I + + R +
Sbjct: 301 LQALR--EITSAPGYSGPIIRFDMAGASAPRETRALHLAAADW 341
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 7e-06
Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 10/146 (6%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
S LK L + L LP + L+ L +S N + +PM + L +L + N
Sbjct: 220 PSGLKELIVSGNRL-TSLPVLPS---ELKELMVSGNRL-TSLPMLPSGLLSLS---VYRN 271
Query: 183 LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQ 241
L +P+ L L +NL GN + + I S + + +G +
Sbjct: 272 QLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRE 330
Query: 242 LKQFDISSNNFVGPIQSFLFSLPSIL 267
+ +++ +++ P + +
Sbjct: 331 TRALHLAAADWLVPAREGEPAPADRW 356
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 9/144 (6%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L + N R ++ S LK L + L LP + L L++ N + +
Sbjct: 224 KELIVSGN--RLTSLPVLPSELKELMVSGNRL-TSLPMLPS---GLLSLSVYRNQL-TRL 276
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDL-QRLVLLEELNLGGNDFGPKFPSLSKNIVSVIL 223
P + L + ++ L N L+ + + + F S + ++ L
Sbjct: 277 PESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHL 336
Query: 224 -RNNSLRSEIPSGLKNFDQLKQFD 246
+ L D+ F
Sbjct: 337 AAADWLVPAREGEPAPADRWHMFG 360
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 7e-14
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL---- 574
++ +++V E+++ GSL DYL + + +L + + +++L
Sbjct: 257 --EEKGG----LYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 575 --HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L N+L+ + AK+S
Sbjct: 310 FVH---------RDLAARNVLVSEDNVAKVS 331
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 9e-14
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L + N ++L KL+NL+ L + + P + +L+ L+++ N + +I
Sbjct: 180 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL-KDI 236
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVI 222
+ SL NL + LA+N ++ ++ L L L EL LG N L+ + ++
Sbjct: 237 G-TLASLTNLTDLDLANNQIS-NLAPLSGLTKLTELKLGANQIS-NISPLAGLTALTNLE 293
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
L N L S + N L + NN S + SL + L N++S+
Sbjct: 294 LNENQLED--ISPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQRLFFYNNKVSD--VS 347
Query: 283 NISCSAKLNFVEISHNLL 300
+++ +N++ HN +
Sbjct: 348 SLANLTNINWLSAGHNQI 365
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 3e-12
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
+++ + I++ FT T L+ L + + + L I +
Sbjct: 7 TITQDTPINQIFT-DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSI 61
Query: 166 MEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSK--NIVSVIL 223
+ L NL I ++N L + L+ L L ++ + N L+ N+ + L
Sbjct: 62 DGVEYLNNLTQINFSNNQLT-DITPLKNLTKLVDILMNNNQI-ADITPLANLTNLTGLTL 119
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283
NN + P LKN L + ++SSN S L L S+ L+ GNQ+++ P
Sbjct: 120 FNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSF-GNQVTDLKP-- 172
Query: 284 ISCSAKLNFVEISHNLL-----IGKLPS 306
++ L ++IS N + + KL +
Sbjct: 173 LANLTTLERLDISSNKVSDISVLAKLTN 200
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 3e-11
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 12/183 (6%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L+ L+ L L L + + P + +L L ++ N + P I++LKNL + L
Sbjct: 261 LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLK 237
N ++ + + L L+ L N SL+ NI + +N + P L
Sbjct: 317 YFNNIS-DISPVSSLTKLQRLFFYNNKVS-DVSSLANLTNINWLSAGHNQISDLTP--LA 372
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
N ++ Q ++ + ++ + SI P IS +I+
Sbjct: 373 NLTRITQLGLNDQAWTNAPVNY-KANVSIPNTVKNVTGALI-APATISDGGSYTEPDITW 430
Query: 298 NLL 300
NL
Sbjct: 431 NLP 433
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 9e-14
Identities = 31/158 (19%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRH 508
+F+P +G G G +++ D ++K ++L R L + +M+ V+ L+KL H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 509 LV----SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
+V + L + +++ ++ +L+D++ + + + I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ V+FLH + G+ +LK NI K+
Sbjct: 125 LQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKV 159
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 1e-13
Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 421 SRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVS 479
R P+T + + L E E + +G GS G++++ G + +
Sbjct: 28 QRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCA 87
Query: 480 VKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
VK + L ++ + + L +V + G G V + +E +
Sbjct: 88 VK-----KVRLEVFRVEELVACAGLSSPRIVPLYGAVR--------EGPWVNIFMELLEG 134
Query: 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-L 598
GSL + L + + + A G+++LHT I ++K +N+LL
Sbjct: 135 GSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGS 188
Query: 599 TAKLS 603
A L
Sbjct: 189 RAALC 193
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 71.1 bits (174), Expect = 2e-13
Identities = 47/235 (20%), Positives = 78/235 (33%), Gaps = 24/235 (10%)
Query: 63 PSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLS-ANFNIDRFFTILT 121
V S + ELT+ + + +P P L+ N + L
Sbjct: 83 RILFGALRVLGISGLQELTLENLEVT-GTAPPPLLEATGPDLNILNLRNVSWATRDAWLA 141
Query: 122 KLSN-----LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT----SLK 172
+L LKVLS+ ++ F +L L++S N GE +
Sbjct: 142 ELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFP 201
Query: 173 NLKSIVLADNLLN----GSVPDLQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVILR 224
L+ + L + + V L+ L+L N G + S+ L
Sbjct: 202 TLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
L+ +P GL +L D+S N LP + L+L GN ++
Sbjct: 262 FTGLKQ-VPKGL--PAKLSVLDLSYNRLDRN--PSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 33/216 (15%), Positives = 79/216 (36%), Gaps = 22/216 (10%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWS---LEVLNISSNFIYGEIPMEITSL-- 171
FT + K +LK L++ + + + R L+ L + + + G P +
Sbjct: 61 FTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATG 120
Query: 172 KNLKSIVLADNLLNG---SVPDLQRLVL--LEELNLGGNDFG---PKFPSLSKNIVSVIL 223
+L + L + + +LQ+ + L+ L++ + + + ++ L
Sbjct: 121 PDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDL 180
Query: 224 RNNSLRSEIP----SGLKNFDQLKQFDISSNNF---VGPIQSFLFSLPSILYLNLAGNQL 276
+N E F L+ + + G + + + L+L+ N L
Sbjct: 181 SDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSL 240
Query: 277 SEALPV-NISCSAKLNFVEISHNLLIGKLPSCIGSN 311
+A + ++LN + +S L ++P + +
Sbjct: 241 RDAAGAPSCDWPSQLNSLNLSFTGL-KQVPKGLPAK 275
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 28/169 (16%), Positives = 59/169 (34%), Gaps = 16/169 (9%)
Query: 147 FWSLEVLNISSNFIYGEIPMEITSLKNLK-------SIVLADNLLNGSVPDLQRLVLLEE 199
+ L+ ++ ++ ++ SLK L S +L L + LQ L L E
Sbjct: 46 EYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTL-EN 104
Query: 200 LNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFD----QLKQFDISSNNFVGP 255
L + G P + ++ + LRN S + + LK I+ + +
Sbjct: 105 LEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNF 164
Query: 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCS----AKLNFVEISHNLL 300
+ P++ L+L+ N + + L + + + +
Sbjct: 165 SCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 2e-13
Identities = 30/158 (18%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL-----KQRHLPQSLMQHVELLSKL 504
+ IGEGS G+ DG + +K + + K+R + + V +L+ +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER---EESRREVAVLANM 80
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
+H + I+ Y++ ++++V+++ G L + +K + + Q +
Sbjct: 81 KHPN--------IVQYRESFEENGSLYIVMDYCEGGDLFKRINA-QKGVLFQEDQILDWF 131
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ ++ +H I ++K++NI L K T +L
Sbjct: 132 VQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQL 166
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 4e-13
Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 26/153 (16%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G G G+++ ++V+VK +K ++ + ++ L+H LV +
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL-- 574
T ++++ E ++ GSL D+L + P+ + G+ F+
Sbjct: 253 ---------TKEPIYIITEFMAKGSLLDFLKS-DEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 575 ----HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L+ NIL+ +L K++
Sbjct: 303 RNYIH---------RDLRAANILVSASLVCKIA 326
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 5e-13
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 434 GLPPFRGFSLEEIEEATNNFDPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQR 488
+ F + L IG+G G + G G++V+VKC+K
Sbjct: 4 SVAAQDEFYRSGWA-----LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIK--ND 55
Query: 489 HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD 548
Q+ + ++++LRH +LV +LG + ++ +++V E+++ GSL DYL
Sbjct: 56 ATAQAFLAEASVMTQLRHSNLVQLLGVIV---EEKG----GLYIVTEYMAKGSLVDYLRS 108
Query: 549 WKKKDMLKWPQRMAIIIGATRGVQFL 574
+ + +L + + +++L
Sbjct: 109 -RGRSVLGGDCLLKFSLDVCEAMEYL 133
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 5e-13
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 24/152 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ +++V E++S GSL D+L + L+ PQ + + G+ ++
Sbjct: 249 ---------SEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 577 GVAPGIFGNN-----LKTENILLDKALTAKLS 603
N L+ NIL+ + L K++
Sbjct: 299 --------MNYVHRDLRAANILVGENLVCKVA 322
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 7e-13
Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 14/201 (6%)
Query: 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFI 160
+A Q L A+ + S K LG + SL + +++ +
Sbjct: 2 AAEQTGLKASQDNVNI-----PDSTFKAYLNGLLGQSSTANITEAQMNSLTYITLANINV 56
Query: 161 YGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG-PKFPSLS--KN 217
+E N+K + + + + + L LE L + G D K P+LS +
Sbjct: 57 TDLTGIE--YAHNIKDLTINNIHAT-NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTS 113
Query: 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ + + +++ I + + ++ D+S N + I L +LP + LN+ + +
Sbjct: 114 LTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVH 172
Query: 278 EALPVNISCSAKLNFVEISHN 298
+ I KLN +
Sbjct: 173 DYRG--IEDFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 8e-11
Identities = 29/147 (19%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L+ N + ++ LSNL+ L ++ + ++ SL +L+IS + I
Sbjct: 69 KDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSI 128
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILR 224
+I +L + SI L+ N + L+ L L+ LN+ + +
Sbjct: 129 LTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD-----------GVHDY--- 174
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNN 251
G+++F +L Q S
Sbjct: 175 ---------RGIEDFPKLNQLYAFSQT 192
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 3e-09
Identities = 25/164 (15%), Positives = 64/164 (39%), Gaps = 17/164 (10%)
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKI---NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
++++L ++L ++ + + + +++ L I++ P I+ L NL+ +
Sbjct: 41 AQMNSLTYITLANINV-----TDLTGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERL 93
Query: 178 VLADN-LLNGSVPDLQRLVLLEELNLGGNDF-GPKFPSLS--KNIVSVILRNNSLRSEIP 233
+ + + +P+L L L L++ + ++ + S+ L N ++I
Sbjct: 94 RIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI- 152
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
LK +LK +I + + P + L +
Sbjct: 153 MPLKTLPELKSLNIQFDGVHD--YRGIEDFPKLNQLYAFSQTIG 194
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 17/142 (11%), Positives = 51/142 (35%), Gaps = 24/142 (16%)
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILR 224
+ + +L I LA+ + + ++ +++L + + +
Sbjct: 37 NITEAQMNSLTYITLANINVT-DLTGIEYAHNIKDLTINNI-----------HATNY--- 81
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284
+ + L++ I + L L S+ L+++ + +++ I
Sbjct: 82 ---------NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI 132
Query: 285 SCSAKLNFVEISHNLLIGKLPS 306
+ K+N +++S+N I +
Sbjct: 133 NTLPKVNSIDLSYNGAITDIMP 154
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 9e-05
Identities = 17/114 (14%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Query: 197 LEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256
LG + + ++ + L N ++ +G++ +K I++ +
Sbjct: 25 YLNGLLGQSSTANITEAQMNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIHATNY- 81
Query: 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
+ + L ++ L + G ++ N+S L ++ISH+ + + I +
Sbjct: 82 -NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT 134
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILG 514
IG G ++++ ++K + L++ S + L+KL+
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS------ 87
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I+ D+ T +++V+E N L +L KKK + +R + V +
Sbjct: 88 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 143
Query: 575 HTGVAPGIFGNNLKTENILLDK 596
H GI ++LK N L+
Sbjct: 144 H---QHGIVHSDLKPANFLIVD 162
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 15/142 (10%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILG 514
IG G ++++ ++K + L++ S + L+KL+
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS------ 68
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I+ D+ T +++V+E N L +L KKK + +R + V +
Sbjct: 69 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 124
Query: 575 HTGVAPGIFGNNLKTENILLDK 596
H GI ++LK N L+
Sbjct: 125 H---QHGIVHSDLKPANFLIVD 143
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 2e-12
Identities = 30/153 (19%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+ +G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
C ++ P +++ E ++ G+L DYL + + + + + + +++L
Sbjct: 285 CT---REPP-----FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 576 TGVAPGIFGNN-----LKTENILLDKALTAKLS 603
N L N L+ + K++
Sbjct: 336 K--------KNFIHRNLAARNCLVGENHLVKVA 360
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 2e-12
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 24/152 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ +++V E++S GSL D+L + L+ PQ + + G+ ++
Sbjct: 332 ---------SEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 577 GVAPGIFGNN-----LKTENILLDKALTAKLS 603
N L+ NIL+ + L K++
Sbjct: 382 --------MNYVHRDLRAANILVGENLVCKVA 405
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 2e-12
Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 18/202 (8%)
Query: 400 KYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNN---FDPT 456
+ + + K ++ Q M S +G S E + +
Sbjct: 2 HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSIL 61
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILG 514
IG G ++++ ++K + L++ S + L+KL+
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS------ 115
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
I+ D+ T +++V+E N L +L KKK + +R + V +
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 171
Query: 575 HTGVAPGIFGNNLKTENILLDK 596
H GI ++LK N L+
Sbjct: 172 H---QHGIVHSDLKPANFLIVD 190
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 37/183 (20%), Positives = 68/183 (37%), Gaps = 14/183 (7%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
LT + + SL + L S + ++E L+ S N I + + L + L
Sbjct: 177 LTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSI-NVVRGPV--NVELTILKL 233
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVILRNNSLRSEIPSG 235
N L L L E++L N+ F + + + + + NN L +
Sbjct: 234 QHNNLT-DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM-QRLERLYISNNRL-VALNLY 290
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
+ LK D+S N+ + ++ + L L N + + +S L + +
Sbjct: 291 GQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVT---LKLSTHHTLKNLTL 346
Query: 296 SHN 298
SHN
Sbjct: 347 SHN 349
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 4e-11
Identities = 38/206 (18%), Positives = 71/206 (34%), Gaps = 35/206 (16%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPS--------------KINRFWSLEVLNISS 157
I L LS+ + + S ++ SL N+S
Sbjct: 136 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 195
Query: 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSLS 215
N + + ++ + + N +N V V L L L N+ +
Sbjct: 196 NLL-----STLAIPIAVEELDASHNSIN-VVRGPV-NVELTILKLQHNNLTDTAWLLNYP 248
Query: 216 KNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
+V V L N L +I +L++ IS+N V + + +P++ L+L+ N
Sbjct: 249 -GLVEVDLSYNEL-EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 305
Query: 275 QLSEALPVNISCSAKLNFVEISHNLL 300
L + N +L + + HN +
Sbjct: 306 HLLH-VERNQPQFDRLENLYLDHNSI 330
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 2e-10
Identities = 41/208 (19%), Positives = 81/208 (38%), Gaps = 38/208 (18%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TS 170
+ + L VL L + G++ P L L++S+N + I + +
Sbjct: 112 VFQNVPLLTVLVLERNDLSSLPRGIFHNTP-------KLTTLSMSNNNL-ERIEDDTFQA 163
Query: 171 LKNLKSIVLADNLLN----GSVPDLQRLVL-------------LEELNLGGNDFGPKFPS 213
+L+++ L+ N L +P L + +EEL+ N
Sbjct: 164 TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 223
Query: 214 LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLA 272
++ + + L++N+L + L N+ L + D+S N I F + + L ++
Sbjct: 224 VNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYIS 280
Query: 273 GNQLSEALPVNISCSAKLNFVEISHNLL 300
N+L L + L +++SHN L
Sbjct: 281 NNRLVA-LNLYGQPIPTLKVLDLSHNHL 307
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 25/179 (13%), Positives = 60/179 (33%), Gaps = 21/179 (11%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ ++N + L ++ L + + + L +L + N + +
Sbjct: 189 FHANVSYN---LLSTLAIPIAVEELDASHNSI-NVVRGPV--NVELTILKLQHNNL-TDT 241
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPKFPSLSKNIV 219
+ + L + L+ N L + ++ LE L + N + +
Sbjct: 242 A-WLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP-TLK 298
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLS 277
+ L +N L + FD+L+ + N+ V + + ++ L L+ N
Sbjct: 299 VLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTH----HTLKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 14/170 (8%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLL 197
+ S + ++I E +L N K + ++ + +P L +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQV 71
Query: 198 EELNLGGNDFG--PK--FPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNF 252
E LNL F I + + N++ +P +N L + N+
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAH-TIQKLYMGFNAI-RYLPPHVFQNVPLLTVLVLERNDL 129
Query: 253 VGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
+ +F P + L+++ N L + + + L +++S N L
Sbjct: 130 SS-LPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRL 177
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 25/177 (14%)
Query: 434 GLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQ-RHLP 491
G+ R ++ + IG G+ G+++ G L + V+VK + L
Sbjct: 97 GVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK 156
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+Q +L + H ++V ++G C Q P +++V+E + G +L +
Sbjct: 157 AKFLQEARILKQYSHPNIVRLIGVCT---QKQP-----IYIVMELVQGGDFLTFLR--TE 206
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
L+ + ++ A G+++L + L N L+ + K+S
Sbjct: 207 GARLRVKTLLQMVGDAAAGMEYLES--------KCCIHRDLAARNCLVTEKNVLKIS 255
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 68.9 bits (168), Expect = 2e-12
Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 7/152 (4%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKL 504
+ ++ +G G G + + G +V++K + + ++++ KL
Sbjct: 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++VS + L +E+ G LR YL ++ LK ++
Sbjct: 70 NHPNVVSA--REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
+ +++LH I +LK ENI+L
Sbjct: 128 SDISSALRYLHEN---RIIHRDLKPENIVLQP 156
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-12
Identities = 47/211 (22%), Positives = 75/211 (35%), Gaps = 34/211 (16%)
Query: 120 LTKLSNLKVLSLVSLGLWG----PLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLK 175
+++L + L L LP LE L S N + E+P SLK+L
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLSSLPELPP---HLESLVASCNSL-TELPELPQSLKSLL 117
Query: 176 SIVLADNLLNG----------------SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIV 219
L+ +P+LQ L+ +++ N K P L ++
Sbjct: 118 VDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSL-KKLPDLPPSLE 176
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
+ NN L E+P L+N L +N+ ++ S+ + N L E
Sbjct: 177 FIAAGNNQL-EELPE-LQNLPFLTAIYADNNS----LKKLPDLPLSLESIVAGNNILEE- 229
Query: 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
LP + L + +NLL LP S
Sbjct: 230 LP-ELQNLPFLTTIYADNNLLK-TLPDLPPS 258
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 5e-11
Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 23/188 (12%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+L+ + + L ++ L + +N + +P SL+ L + DN
Sbjct: 214 PLSLESIVAGNNIL--EELPELQNLPFLTTIYADNNLL-KTLPDLPPSLEAL---NVRDN 267
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242
L Q L L+ + L N+ + +N + + + L
Sbjct: 268 YLTDLPELPQSLTFLDVSENIFS----GLSELPPNLYYLNASSNEI-RSLCDLPPS---L 319
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302
++ ++S+N + P + L + N L+E +P L + + +N L
Sbjct: 320 EELNVSNNK----LIELPALPPRLERLIASFNHLAE-VPELPQ---NLKQLHVEYNPLR- 370
Query: 303 KLPSCIGS 310
+ P S
Sbjct: 371 EFPDIPES 378
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 29/177 (16%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP----DLQRLVL-------- 196
L+ S+ + E+P+E ++K+ A + + P + + + +
Sbjct: 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD 70
Query: 197 --LEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254
EL L P L ++ S++ NSL +E+P ++ L + +
Sbjct: 71 RQAHELELNNLGLS-SLPELPPHLESLVASCNSL-TELPELPQSLKSLLVDNNNLKA--- 125
Query: 255 PIQSFLFSLPSIL-YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310
L LP +L YL ++ NQL + LP + S+ L +++ +N L KLP S
Sbjct: 126 -----LSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK-KLPDLPPS 174
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 4e-09
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
NL L+ S + L SLE LN+S+N + E+P L+ L + + N
Sbjct: 296 PPNLYYLNASSNEI-RSLCDLPP---SLEELNVSNNKLI-ELPALPPRLERL---IASFN 347
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242
L VP+L L++L++ N +FP + +++ LR NS +E+P +N L
Sbjct: 348 HLA-EVPEL--PQNLKQLHVEYNPL-REFPDIPESVED--LRMNSHLAEVPELPQN---L 398
Query: 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
KQ + +N P++ F S+ L + ++ + + KL H+
Sbjct: 399 KQLHVETN----PLREFPDIPESVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 16/198 (8%)
Query: 104 QQSLSANFNIDRFFTI-LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG 162
++A F + TI +L+ L L + + + I + L L +SN I
Sbjct: 21 ASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM--TGIEKLTGLTKLICTSNNI-T 77
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI 222
+ ++ NL + N L + D+ L L LN N S + + +
Sbjct: 78 TLD--LSQNTNLTYLACDSNKL--TNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLN 133
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
N+L +EI + + QL + D N + + + + L+ + N+++E +
Sbjct: 134 CARNTL-TEID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE---L 185
Query: 283 NISCSAKLNFVEISHNLL 300
++S + LN + N +
Sbjct: 186 DVSQNKLLNRLNCDTNNI 203
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 23/224 (10%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+T L+ L L L ++ L L+ + EI +T L
Sbjct: 229 VTPLTQLTYFDCSVNPL-TELD--VSTLSKLTTLHCIQTDLL-EID--LTHNTQLIYFQA 282
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNF 239
D+ L L+ S + +V + L N L +E+ + +
Sbjct: 283 EGCRKI-KELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTEL-TELD--VSHN 338
Query: 240 DQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISC-----SAKLNF 292
+LK + + IQ F + +P++ A Q ++ + +
Sbjct: 339 TKLKSLSCVNAH----IQDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDL 394
Query: 293 VEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYS 336
++ N + + + T+ TW LS N + ++
Sbjct: 395 LDQFGNPMNIEPGDGGVYDQATNTI--TWENLSTDNPAVTYTFT 436
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 41/193 (21%), Positives = 76/193 (39%), Gaps = 23/193 (11%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+++ L L+ + + L +N+ L L+ SSN + EI +T L L
Sbjct: 187 VSQNKLLNRLNCDTNNI-TKLD--LNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDC 240
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNF 239
+ N L + D+ L L L+ D L+ N + + R + +
Sbjct: 241 SVNPL--TELDVSTLSKLTTLHCIQTDLLEI--DLTHNTQLIYFQAEGCRKIKELDVTHN 296
Query: 240 DQLKQFDISSNNFVGPIQSF-LFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298
QL D + I L P ++YL L +L+E +++S + KL + +
Sbjct: 297 TQLYLLDCQAAG----ITELDLSQNPKLVYLYLNNTELTE---LDVSHNTKLKSLSCVNA 349
Query: 299 LL-----IGKLPS 306
+ +GK+P+
Sbjct: 350 HIQDFSSVGKIPA 362
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 4e-12
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKL-----KQRHLPQSLMQHVELLSKL 504
+++ IG GS G+ K +DG + K L ++ Q L+ V LL +L
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK---QMLVSEVNLLREL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD-MLKWPQRMAI 563
+H ++V D NT T+++V+E+ G L +T K+ L + +
Sbjct: 63 KHPNIVRYYDR----IIDRTNT--TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 564 IIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTAKL 602
+ T ++ H G + +LK N+ LD KL
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL 157
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 4e-12
Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 12/177 (6%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
L+VL L + L L ++ N I + L +L+ +
Sbjct: 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105
Query: 178 VLADNLLNGSVPD--LQRLVLLEELNLGGN-----DFGPKFPSLSKNIVSVILRNNSLRS 230
V + L S+ + + L L+ELN+ N F +L+ N+ + L +N ++S
Sbjct: 106 VAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQS 163
Query: 231 EIPSGLKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284
+ L+ Q+ ++S S N + IQ F + L L N S +
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTC 220
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 5e-12
Identities = 43/237 (18%), Positives = 77/237 (32%), Gaps = 16/237 (6%)
Query: 72 CTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSL 131
N + E + + S SL + + + L L
Sbjct: 254 LCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTI--ERVKDFSYNFGWQHLEL 311
Query: 132 VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGS---V 188
V+ G P+ + SL+ L +SN L +L+ + L+ N L+
Sbjct: 312 VNCKF-GQFPT--LKLKSLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCS 366
Query: 189 PDLQRLVLLEELNLGGN---DFGPKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQ 244
L+ L+L N F L + + ++++L+ + L
Sbjct: 367 QSDFGTTSLKYLDLSFNGVITMSSNFLGLE-QLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425
Query: 245 FDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
DIS + L S+ L +AGN E +I + L F+++S L
Sbjct: 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 7/164 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
++LK L L G+ + S LE L+ + + + SL+NL +
Sbjct: 369 DFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 427
Query: 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLS----KNIVSVILRNNSLRSEIP 233
++ + L LE L + GN F F +N+ + L L P
Sbjct: 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
+ + L+ +++SN L S+ + L N
Sbjct: 488 TAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-07
Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 25/163 (15%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198
+P + +S + L++S N + S L+ + L+ + Q L L
Sbjct: 22 IPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLS 79
Query: 199 ELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258
L L N ++S L++ N
Sbjct: 80 TLILT---------------------GNPIQSLALGAFSGLSSLQKLVAVETNLASLENF 118
Query: 259 FLFSLPSILYLNLAGNQLSE-ALPVNISCSAKLNFVEISHNLL 300
+ L ++ LN+A N + LP S L +++S N +
Sbjct: 119 PIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 5e-12
Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 32/157 (20%)
Query: 459 IGEGSQGQLYKGFLTDGSR-----VSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+G G+ G +YKG V++K L+ + ++ +++ + + H+ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C STV L+ + + G L DY+ + KD + + + +G+
Sbjct: 83 LGIC---------LTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMN 131
Query: 573 FL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L H +L N+L+ K++
Sbjct: 132 YLEDRRLVH---------RDLAARNVLVKTPQHVKIT 159
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 9e-12
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL---- 574
T ++++ E++ NGSL D+L L + + + G+ F+
Sbjct: 78 -------TQEPIYIITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 575 --HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L+ NIL+ L+ K++
Sbjct: 130 YIH---------RDLRAANILVSDTLSCKIA 151
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 9e-12
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 36/178 (20%)
Query: 442 SLEEIEEATNNFDPTNL------IGEGSQGQLYKGFLTDGSR---VSVKCLK--LKQRHL 490
+LEEI D L +G G+ G + KG+ V+VK LK L
Sbjct: 2 ALEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 61
Query: 491 PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK 550
L+ ++ +L + ++V ++G C + LV+E G L YL +
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC---------EAESWMLVMEMAELGPLNKYL---Q 109
Query: 551 KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+ +K + ++ + G+++L +N L N+LL AK+S
Sbjct: 110 QNRHVKDKNIIELVHQVSMGMKYLEE--------SNFVHRDLAARNVLLVTQHYAKIS 159
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 67.1 bits (163), Expect = 1e-11
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 19/201 (9%)
Query: 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGE 163
++++ + I + F + +L + + N S++ + +++ I
Sbjct: 2 GETITVSTPIKQIFP-DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDI-KS 57
Query: 164 IPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSV 221
+ I L N+ + L N L + L L L L L N SL K + S+
Sbjct: 58 VQ-GIQYLPNVTKLFLNGNKLT-DIKPLTNLKNLGWLFLDENKIK-DLSSLKDLKKLKSL 114
Query: 222 ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEA 279
L +N + S+I +GL + QL+ + +N I + L L + L+L NQ+S+
Sbjct: 115 SLEHNGI-SDI-NGLVHLPQLESLYLGNNK----ITDITVLSRLTKLDTLSLEDNQISDI 168
Query: 280 LPVNISCSAKLNFVEISHNLL 300
+P ++ KL + +S N +
Sbjct: 169 VP--LAGLTKLQNLYLSKNHI 187
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 1e-10
Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 18/201 (8%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKI---NRFWSLEVLNISSNFIY 161
L N N LT L NL L L + + L+ L++ N I
Sbjct: 68 TKLFLNGNKLTDIKPLTNLKNLGWLFLDENKI-----KDLSSLKDLKKLKSLSLEHNGI- 121
Query: 162 GEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSK--NIV 219
+I + L L+S+ L +N + + L RL L+ L+L N L+ +
Sbjct: 122 SDIN-GLVHLPQLESLYLGNNKIT-DITVLSRLTKLDTLSLEDNQIS-DIVPLAGLTKLQ 178
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
++ L N + S++ L L ++ S + + +L + L
Sbjct: 179 NLYLSKNHI-SDL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT- 235
Query: 280 LPVNISCSAKLNFVEISHNLL 300
P IS + +L
Sbjct: 236 -PEIISDDGDYEKPNVKWHLP 255
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 17/129 (13%), Positives = 48/129 (37%), Gaps = 14/129 (10%)
Query: 174 LKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSE 231
+ + + + + NL + + +I +I N+ ++S
Sbjct: 1 MGETITVSTPIK-QIFPDDAFAETIKDNLKKKSVT-DAVTQNELNSIDQIIANNSDIKS- 57
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISCSAK 289
+ G++ + + ++ N + L +L ++ +L L N++ + ++ K
Sbjct: 58 V-QGIQYLPNVTKLFLNGNK----LTDIKPLTNLKNLGWLFLDENKIKDL--SSLKDLKK 110
Query: 290 LNFVEISHN 298
L + + HN
Sbjct: 111 LKSLSLEHN 119
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 57/331 (17%), Positives = 109/331 (32%), Gaps = 55/331 (16%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSN 158
+LS N + + + L + + L + + L L+ L++ N
Sbjct: 320 NLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK-------LQTLDLRDN 372
Query: 159 FI--------YGEIPMEITSLKNLKSIVLADNLLN---------GSVPDLQRLVLLEELN 201
+ +I + L L I L NL++ + L R+ L+ L
Sbjct: 373 ALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILI 432
Query: 202 LGGNDF----GPKFPSLSKNIVSVILRNNSLRSEIPSGL-----KNFDQLKQFDISSNNF 252
L N F G + PS + ++ + L N L+ + L + L+ ++ N
Sbjct: 433 LNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492
Query: 253 VGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL-------IGKLP 305
L ++ L+L N+L+ L N A L ++IS N L L
Sbjct: 493 NSLPPGVFSHLTALRGLSLNSNRLTV-LSHN-DLPANLEILDISRNQLLAPNPDVFVSLS 550
Query: 306 S-CIGSNSLNRTVVSTW--NCLSGVNTKYQHP---YSFCRKEALAVKPPVNVKSDDEQST 359
I N + N L+ N P ++ + ++ ++
Sbjct: 551 VLDITHNKFICECELSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCDEE 610
Query: 360 RVDVGLILGIIGGVVGFVVVFGLLVLVVIRR 390
V L + + +F + +L V +
Sbjct: 611 EVLKSLKFSLFIVCTVTLTLFLMTILTVTKF 641
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 2e-10
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 10/172 (5%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGND 206
+ E L +S N+I L+ L+ + L ++ + L L L+LG +
Sbjct: 25 TTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84
Query: 207 ---FGPKFPSLSKNIVSVILRNNSLRSEI--PSGLKNFDQLKQFDISSNNFVG-PIQSFL 260
P ++ + L L + +N L + D+S N +
Sbjct: 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSF 144
Query: 261 FSLPSILYLNLAGNQLSEALPVNIS--CSAKLNFVEISHNLLIGKLPSCIGS 310
L S+ ++ + NQ+ + L+F ++ N L ++ G
Sbjct: 145 GKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGK 196
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 31/208 (14%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI--PMEITSLKNLKSIVLA 180
L NL++L L S ++ P + L L + + + +LK L + L+
Sbjct: 72 LPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLS 131
Query: 181 DNLLN--GSVPDLQRLVLLEELNLGGNDF----GPKFPSLS-KNIVSVILRNNSLRSEIP 233
N + P +L L+ ++ N + L K + L NSL S +
Sbjct: 132 KNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVS 191
Query: 234 SGLKNFDQ------LKQFDISSNNFVGPIQS------------FLFSLPSILYLNLAGNQ 275
L+ D+S N + I L I+ +
Sbjct: 192 VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251
Query: 276 LSEALPVNI---SCSAKLNFVEISHNLL 300
+ + N + + +++SH +
Sbjct: 252 IKD-PDQNTFAGLARSSVRHLDLSHGFV 278
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%)
Query: 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFW--SLEVLNIS 156
++ +N L ++ + P + S+ L++S
Sbjct: 215 GWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLS 274
Query: 157 SNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLS 215
F++ +LK+LK + LA N +N + L L+ LNL N
Sbjct: 275 HGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL-------- 326
Query: 216 KNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
E+ S ++ D+ N+ L + L+L N
Sbjct: 327 --------------GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDN 372
Query: 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVS-TWNCLSGVNTKY 331
L+ I + + +S N L + +L ++ + N L ++ Y
Sbjct: 373 ALTT-----IHFIPSIPDIFLSGNKL-----VTLPKINLTANLIHLSENRLENLDILY 420
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 27/131 (20%), Positives = 43/131 (32%), Gaps = 12/131 (9%)
Query: 179 LADNLLNG--SVPDLQRLVLLEELNLGGNDF----GPKFPSLSKNIVSVILRNNSLRSEI 232
+A VP Q L E L L N FP L + + L + I
Sbjct: 8 IAFYRFCNLTQVP--QVLNTTERLLLSFNYIRTVTASSFPFLE-QLQLLELGSQYTPLTI 64
Query: 233 PSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS--AK 289
+N L+ D+ S+ L + L L LS+A+ +
Sbjct: 65 DKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
Query: 290 LNFVEISHNLL 300
L +++S N +
Sbjct: 125 LTRLDLSKNQI 135
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 1e-11
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 15/152 (9%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
++G+G+ +++G G ++K + M+ E+L KL H+++V +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA- 74
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
++ T L++E GSL L + L + + ++ G+ L
Sbjct: 75 ---IEEET--TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 576 TGVAPGIFGNNLKTENILL----DKALTAKLS 603
GI N+K NI+ D KL+
Sbjct: 130 ---ENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 37/168 (22%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTDGSR-----VSVKCLKLK-QRHLPQSLMQHVELL 501
F T L +G G G ++KG V +K ++ K R Q++ H+ +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
L H H+V +LG C GS++ LV +++ GSL D++ + + L +
Sbjct: 70 GSLDHAHIVRLLGLC---------PGSSLQLVTQYLPLGSLLDHVR--QHRGALGPQLLL 118
Query: 562 AIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +G+ +L H NL N+LL +++
Sbjct: 119 NWGVQIAKGMYYLEEHGMVH---------RNLAARNVLLKSPSQVQVA 157
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+F+ +G+G G +Y +++K L +L++ + L + VE+ S LRH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ + G+ + D V+L+LE+ G++ L K + I
Sbjct: 69 PNILRLYGY----FHDATR----VYLILEYAPLGTVYRELQKLSK---FDEQRTATYITE 117
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
+ + H + + ++K EN+LL A K++ G+++ PS R L
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 2e-11
Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 26/190 (13%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSL 171
I L LS+ + + S L+ L +SSN + + ++ +
Sbjct: 142 IFHNTPKLTTLSMSNNNLERIEDDTFQATTS-------LQNLQLSSNRL-THVD--LSLI 191
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
+L ++ NLL+ L + +EEL+ N ++ + + L++N+L
Sbjct: 192 PSLFHANVSYNLLS----TLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD- 246
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCSAKL 290
+ L N+ L + D+S N I F + + L ++ N+L L + L
Sbjct: 247 -TAWLLNYPGLVEVDLSYNELEK-IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTL 303
Query: 291 NFVEISHNLL 300
+++SHN L
Sbjct: 304 KVLDLSHNHL 313
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 5e-09
Identities = 37/209 (17%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Query: 103 SQQSLSANFNIDRFFTILTKLSN---LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF 159
QQ + + I + L + + + + +++ ++
Sbjct: 3 GQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNST 62
Query: 160 IYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPKFPS 213
+ ++P + S + ++ + L D + + +++L +G N P
Sbjct: 63 MR-KLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ 120
Query: 214 LSKNIVSVILRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNL 271
+ ++L N L S +P G+ N +L +S+NN I+ F S+ L L
Sbjct: 121 NVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQL 178
Query: 272 AGNQLSEALPVNISCSAKLNFVEISHNLL 300
+ N+L+ V++S L +S+NLL
Sbjct: 179 SSNRLTH---VDLSLIPSLFHANVSYNLL 204
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-05
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 16/139 (11%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK 172
L L + L + + + LE L IS+N + + + +
Sbjct: 250 LLNYPGLVEVDLSYNELEKIMYHPFVKMQR-------LERLYISNNRL-VALNLYGQPIP 301
Query: 173 NLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLR-SE 231
LK + L+ N L + + LE L L N S + ++ L +N +
Sbjct: 302 TLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNS 361
Query: 232 IPSGLKNFDQLKQFDISSN 250
+ + +N + D +
Sbjct: 362 LRALFRNVARPAVDDADQH 380
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 29/156 (18%)
Query: 459 IGEGSQGQLYKGFLTD-----GSRVSVKCLK-LKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G++ G V+VK LK Q +++L L H H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C +++ LV+E++ GSLRDYL + + Q + G+
Sbjct: 99 KGCCE------DAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMA 148
Query: 573 FLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+LH + L N+LLD K+
Sbjct: 149 YLHA--------QHYIHRDLAARNVLLDNDRLVKIG 176
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 36/158 (22%), Positives = 56/158 (35%), Gaps = 33/158 (20%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK---LKQRHLPQSLMQHVELLSKLRHRHLVS 511
+G+GS G + +G S V+VKCLK L Q ++ V + L HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
+ G + +V E GSL D L K + + G+
Sbjct: 86 LYGVV---------LTPPMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRYAVQVAEGM 134
Query: 572 QFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L H +L N+LL K+
Sbjct: 135 GYLESKRFIH---------RDLAARNLLLATRDLVKIG 163
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 3e-11
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 15/152 (9%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
++G+G+ +++G G ++K + M+ E+L KL H+++V +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA- 74
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
++ T L++E GSL L + L + + ++ G+ L
Sbjct: 75 ---IEEE--TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 576 TGVAPGIFGNNLKTENILL----DKALTAKLS 603
GI N+K NI+ D KL+
Sbjct: 130 ---ENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 3e-11
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 459 IGEGSQGQLYKGFLTDGS----RVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G + +G L +V+VK +KL + + + + H +++ +
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
LG CI + ++L + G L YL
Sbjct: 102 LGVCI---EMSSQGIPKPMVILPFMKYGDLHTYL 132
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 30/155 (19%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 459 IGEGSQGQLYKGFLTDGSR---VSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSILG 514
+G G+ G + +G + V++K LK ++ + +M+ +++ +L + ++V ++G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
C + LV+E G L +L K++ + ++ + G+++L
Sbjct: 78 VC---------QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYL 126
Query: 575 ------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L N+LL AK+S
Sbjct: 127 EEKNFVH---------RDLAARNVLLVNRHYAKIS 152
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
Query: 443 LEEIEEATNNFDPTNL------IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLM 495
E E + DP + +G+G+ G++YK G+ + K ++ K + +
Sbjct: 5 SREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI 64
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+E+L+ H ++V +LG Y +++++E G++ + + + L
Sbjct: 65 VEIEILATCDHPYIVKLLG----AYY----HDGKLWIMIEFCPGGAVDAIMLELDRG--L 114
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL-----SGYNIPLP 610
PQ + + FLH+ I +LK N+L+ +L S N+
Sbjct: 115 TEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171
Query: 611 SKVRNT 616
K R++
Sbjct: 172 QK-RDS 176
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 28/155 (18%), Positives = 60/155 (38%), Gaps = 26/155 (16%)
Query: 459 IGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+G+G+ G + G+ V+VK L+ + + +++L L +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G + LV+E++ +G LRD+L + + L + + +G+++
Sbjct: 91 GVSYGP-GRQS-----LRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEY 142
Query: 574 LHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
L + L NIL++ K++
Sbjct: 143 LGS--------RRCVHRDLAARNILVESEAHVKIA 169
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 4e-11
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 442 SLEEIEEATNNFDPTNL------IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSL 494
L++++E + P + +GEGS G +YK G V++K + ++ Q +
Sbjct: 14 QLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEI 71
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ + ++ + H+V G +Y + +++V+E+ GS+ D + K
Sbjct: 72 IKEISIMQQCDSPHVVKYYG----SYF----KNTDLWIVMEYCGAGSVSDIIRLRNKT-- 121
Query: 555 LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
L + I+ +G+++LH ++K NILL+ AKL
Sbjct: 122 LTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKL 166
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 4e-11
Identities = 54/288 (18%), Positives = 101/288 (35%), Gaps = 37/288 (12%)
Query: 46 YPEVLQGWTDWTNFCYLPSSSSLKIV-----CTNSRVTELTVIGNK--SSPAHSPKPTFG 98
Y + W W LP + + V C ++ +EL + S P + P
Sbjct: 26 YADYFSAWDKWEKQ-ALPGENRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLPP---- 80
Query: 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSN 158
L N ++ ++L+ L L LP SL+ L++ +N
Sbjct: 81 ----QITVLEITQN--ALISLPELPASLEYLDACDNRL-STLPELP---ASLKHLDVDNN 130
Query: 159 FIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNI 218
+ +P L+ + +N L +P+L LE L++ N P L +++
Sbjct: 131 QL-TMLPELPALLEYIN---ADNNQLT-MLPEL--PTSLEVLSVRNNQLT-FLPELPESL 182
Query: 219 VSVILRNNSLRSEIPSGLKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQ 275
++ + N L +P+ ++ +I N + I + SL + L N
Sbjct: 183 EALDVSTNLL-ESLPAVPVRNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNP 241
Query: 276 LSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323
LS + ++S + H I S N+L+R +
Sbjct: 242 LSSRIRESLS---QQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTA 286
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 5e-11
Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 26/151 (17%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG G G ++ G+ + +V++K ++ + ++ E++ KL H LV + G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCL- 73
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL---- 574
+ P + LV E + +G L DYL ++ + + + + G+ +L
Sbjct: 74 --EQAP-----ICLVTEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 575 --HTGVAPGIFGNNLKTENILLDKALTAKLS 603
H +L N L+ + K+S
Sbjct: 125 VIH---------RDLAARNCLVGENQVIKVS 146
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 5e-11
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 26/193 (13%)
Query: 123 LSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNL 174
L NL+ L L + LG++ L + L L+IS N I + + L NL
Sbjct: 79 LFNLRTLGLRSNRLKLIPLGVFTGLSN-------LTKLDISENKI-VILLDYMFQDLYNL 130
Query: 175 KSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRNNSL 228
KS+ + DN L + L LE+L L + P L ++ + LR+ ++
Sbjct: 131 KSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH-GLIVLRLRHLNI 188
Query: 229 RSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
+ I K +LK +IS ++ + ++ L++ L+ + +
Sbjct: 189 -NAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247
Query: 288 AKLNFVEISHNLL 300
L F+ +S+N +
Sbjct: 248 VYLRFLNLSYNPI 260
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 5e-09
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 14/167 (8%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN 205
LE L ++ N + + +L NL+++ L N L +P L L +L++ N
Sbjct: 57 HLEELELNENIV-SAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISEN 114
Query: 206 DF----GPKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFL 260
F L N+ S+ + +N L I + L+Q + N I +
Sbjct: 115 KIVILLDYMFQDLY-NLKSLEVGDNDL-VYISHRAFSGLNSLEQLTLEKCNLTS-IPTEA 171
Query: 261 FS-LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306
S L ++ L L ++ + +L +EISH + +
Sbjct: 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 28/195 (14%)
Query: 123 LSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNL 174
L++L+ L+L + L L VL + I I L L
Sbjct: 151 LNSLEQLTLEKCNLTSIPTEALSHLHG-------LIVLRLRHLNIN-AIRDYSFKRLYRL 202
Query: 175 KSIVLAD-NLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS----KNIVSVILRNNSLR 229
K + ++ L+ P+ + L L++ + P L+ + + L N +
Sbjct: 203 KVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPI- 260
Query: 230 SEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI-SC 286
S I L +L++ + ++ + F L + LN++GNQL+ L ++
Sbjct: 261 STIEGSMLHELLRLQEIQLVGGQLAV-VEPYAFRGLNYLRVLNVSGNQLT-TLEESVFHS 318
Query: 287 SAKLNFVEISHNLLI 301
L + + N L
Sbjct: 319 VGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 12/142 (8%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPME-ITSLKNLKSIV 178
+L LKVL + + +L L+I+ + +P + L L+ +
Sbjct: 196 FKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL-TAVPYLAVRHLVYLRFLN 254
Query: 179 LADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPK-FPSLSKNIVSVILRNNSLRSEI 232
L+ N ++ ++ L L+ L+E+ L G P F L+ + + + N L + +
Sbjct: 255 LSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLN-YLRVLNVSGNQLTT-L 311
Query: 233 PSGL-KNFDQLKQFDISSNNFV 253
+ + L+ + SN
Sbjct: 312 EESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 14/124 (11%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGN---DFGPK-FPSLSK 216
+P I + + L N + ++ + LEEL L N P F +L
Sbjct: 25 AVPEGI--PTETRLLDLGKNRI-KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF- 80
Query: 217 NIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGN 274
N+ ++ LR+N L IP G L + DIS N V + ++F L ++ L + N
Sbjct: 81 NLRTLGLRSNRL-KLIPLGVFTGLSNLTKLDISENKIVI-LLDYMFQDLYNLKSLEVGDN 138
Query: 275 QLSE 278
L
Sbjct: 139 DLVY 142
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 17/91 (18%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLN 270
+ + L N +++ +F L++ +++ N V ++ F+ L ++ L
Sbjct: 28 EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENI-VSAVEPGAFNNLFNLRTLG 86
Query: 271 LAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
L N+L +P+ + + + L ++IS N +
Sbjct: 87 LRSNRLKL-IPLGVFTGLSNLTKLDISENKI 116
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 6e-11
Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 36/219 (16%)
Query: 401 YERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNL-- 458
+R + S +P+PA + + EE+++ NL
Sbjct: 280 PQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLI 339
Query: 459 ----IGEGSQGQLYKGFLTDGSR---VSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLV 510
+G G+ G + +G + V++K LK ++ + +M+ +++ +L + ++V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
++G C + LV+E G L +L K++ + ++ + G
Sbjct: 400 RLIGVC---------QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMG 448
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++L H NL N+LL AK+S
Sbjct: 449 MKYLEEKNFVH---------RNLAARNVLLVNRHYAKIS 478
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 6e-11
Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 32/157 (20%)
Query: 459 IGEGSQGQLYKGFLTDGSR-----VSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSI 512
+G G+ G +YKG V++K L+ + ++ +++ + + H+ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
LG C STV L+ + + G L DY+ + KD + + + +G+
Sbjct: 83 LGIC---------LTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMN 131
Query: 573 FL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+L H +L N+L+ K++
Sbjct: 132 YLEDRRLVH---------RDLAARNVLVKTPQHVKIT 159
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 7e-11
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G + G V+VK +K Q + + KL H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCS- 73
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++P +++V E+ISNG L +YL L+ Q + + G+ FL +
Sbjct: 74 --KEYP-----IYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYDVCEGMAFLES-- 122
Query: 579 APGIFGNN-----LKTENILLDKALTAKLS 603
+ L N L+D+ L K+S
Sbjct: 123 ------HQFIHRDLAARNCLVDRDLCVKVS 146
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 9e-11
Identities = 33/205 (16%), Positives = 73/205 (35%), Gaps = 34/205 (16%)
Query: 403 RSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEG 462
++ ++ G+P A ++ +P+ + + +G+G
Sbjct: 9 KAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSR----------------RRYVRGRFLGKG 52
Query: 463 SQGQLYKGFLTD-GSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+ ++ D + K + L + H + + + + L H+H ++
Sbjct: 53 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH--------VV 104
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ VF+VLE SL + K++ L P+ + G Q+LH
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLH--- 158
Query: 579 APGIFGNNLKTENILLDKALTAKLS 603
+ +LK N+ L++ L K+
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIG 183
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 9e-11
Identities = 32/174 (18%), Positives = 65/174 (37%), Gaps = 26/174 (14%)
Query: 436 PPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM 495
P G E + +G G G + G V++K +K + +
Sbjct: 9 PSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFI 67
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+ +++ L H LV + G C + P +F++ E+++NG L +YL + +
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLR--EMRHRF 117
Query: 556 KWPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ Q + + +++L H +L N L++ K+S
Sbjct: 118 QTQQLLEMCKDVCEAMEYLESKQFLH---------RDLAARNCLVNDQGVVKVS 162
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 15/187 (8%)
Query: 119 ILTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFIY--GEIPMEITSL 171
L +L+ L L V L SL+ L +S N + + + +L
Sbjct: 329 FSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP--SLQTLVLSQNHLRSMQKTGEILLTL 386
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
KNL S+ ++ N + Q + LNL + + + + + NN+L S
Sbjct: 387 KNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDS- 445
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291
L L++ IS N + P +L + ++ NQL L
Sbjct: 446 FSLFLPR---LQELYISRNKLKT-LPDASL-FPVLLVMKISRNQLKSVPDGIFDRLTSLQ 500
Query: 292 FVEISHN 298
+ + N
Sbjct: 501 KIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 18/207 (8%)
Query: 117 FTILTKLSNLKVLSLVSLGLWGPLPSKINRFW---SLEVLNISSNFIYGEIPMEITSLKN 173
+L+ L L L + +L L+IS N +P +
Sbjct: 354 SACKGAWPSLQTLVLSQNHLRS-MQKTGEILLTLKNLTSLDISRNTF-HPMPDSCQWPEK 411
Query: 174 LKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIP 233
++ + L+ + V LE L++ N+ F + + + N L++ +P
Sbjct: 412 MRFLNLSSTGIR-VVKTCI-PQTLEVLDVSNNNLD-SFSLFLPRLQELYISRNKLKT-LP 467
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
F L IS N L S+ + L N P + SC
Sbjct: 468 DAS-LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN------PWDCSCPRIDYLS 520
Query: 294 EI--SHNLLIGKLPSCIGSNSLNRTVV 318
++ C GS R+++
Sbjct: 521 RWLNKNSQKEQGSAKCSGSGKPVRSII 547
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 6e-09
Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 13/210 (6%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198
+PS + +++ L++S N I ++ + NL+ ++L + +N D L LE
Sbjct: 20 IPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLE 77
Query: 199 ELNLGGN---DFGPKFPSLSKNIVSVILRNNSLRS-EIPSGLKNFDQLKQFDISSNNFVG 254
L+L N + ++ + L N ++ + S N L+ I +
Sbjct: 78 HLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFS 137
Query: 255 PIQSFLFS-LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
I+ F+ L S+ L + L ++ ++ + + + + +
Sbjct: 138 EIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES-----AFLLEIFA 192
Query: 314 NRTVVSTWNCLSGVNTKYQHPYSFCRKEAL 343
+ + L N E
Sbjct: 193 DILSSVRYLELRDTNLARFQFSPLPVDEVS 222
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 36/190 (18%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK 172
L +NL+VL L + + L S LE L++S N + L
Sbjct: 46 LRACANLQVLILKSSRINTIEGDAFYSLGS-------LEHLDLSDNHLSSLSSSWFGPLS 98
Query: 173 NLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230
+LK + L N G L L+ L +G +
Sbjct: 99 SLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN--------------------VETFSE 138
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290
L + +I + + L S+ I +L L ++ + L + + +
Sbjct: 139 IRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSV 198
Query: 291 NFVEISHNLL 300
++E+ L
Sbjct: 199 RYLELRDTNL 208
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 7/199 (3%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
+L + + LS+++ L L L S + + +
Sbjct: 178 TLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTD 237
Query: 166 MEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI-LR 224
L L +L L D L L + N +D + + + + +
Sbjct: 238 ESFNELLKLLRYIL--ELSEVEFDDC-TLNGLGDFNPSESDVVSELGKVETVTIRRLHIP 294
Query: 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284
L ++ + +++K+ + ++ SF L S+ +L+L+ N + E N
Sbjct: 295 QFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNS 354
Query: 285 SCSAKLNFVEI---SHNLL 300
+C ++ S N L
Sbjct: 355 ACKGAWPSLQTLVLSQNHL 373
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 7e-08
Identities = 26/223 (11%), Positives = 66/223 (29%), Gaps = 33/223 (14%)
Query: 106 SLSANFNIDRFF-TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+ L++L L + +L L + + L + + +
Sbjct: 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLL 188
Query: 165 PMEITSLKNLKSIVLADNLLN----GSVPDLQRLVLLEELNLGGNDFG-------PKFPS 213
+ L +++ + L D L +P + +++L G+ K
Sbjct: 189 EIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLR 248
Query: 214 LSKNIVSVILRNNSLRSEIPSGLKNFD-----------QLKQFDISSNNFVGPIQSFLFS 262
+ V + +L D +++ I + +
Sbjct: 249 YILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSL 308
Query: 263 LPSILYLNLAGNQLSEALPVNISCSA-----KLNFVEISHNLL 300
L + + + +++ + CS L F+++S NL+
Sbjct: 309 LEKVKRITVENSKVFL-----VPCSFSQHLKSLEFLDLSENLM 346
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 28/206 (13%), Positives = 68/206 (33%), Gaps = 23/206 (11%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSK-INRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
++ L+NL+ L + ++ + + SL L I + + + S++++
Sbjct: 117 SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176
Query: 177 IVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS------LSKNIVSVILRNNSLR 229
+ L + + L + L L + S +S + + R + L
Sbjct: 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236
Query: 230 S----EIPSGLKNFDQLKQFDISSN--NFVGPIQSFLFS---------LPSILYLNLAGN 274
E+ L+ +L + + N +G +I L++
Sbjct: 237 DESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQF 296
Query: 275 QLSEALPVNISCSAKLNFVEISHNLL 300
L L S K+ + + ++ +
Sbjct: 297 YLFYDLSTVYSLLEKVKRITVENSKV 322
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 459 IGEGSQGQLYKGFLTDGS--------RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+G+G+ +++KG + V +K L R+ +S + ++SKL H+HLV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G C+ LV E + GSL YL K K+ + ++ +
Sbjct: 76 LNYGVCV---CGDE-----NILVQEFVKFGSLDTYLK--KNKNCINILWKLEVAKQLAAA 125
Query: 571 VQFL 574
+ FL
Sbjct: 126 MHFL 129
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 1e-10
Identities = 36/168 (21%), Positives = 84/168 (50%), Gaps = 22/168 (13%)
Query: 443 LEEIEEATNNFDPTNL------IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLM 495
LE++ + DP IG+G+ G +Y + G V+++ + L+Q+ + ++
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+ ++ + ++ ++V+ L +Y G +++V+E+++ GSL D +T + +
Sbjct: 66 NEILVMRENKNPNIVNYLD----SYL----VGDELWVVMEYLAGGSLTDVVT----ETCM 113
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
Q A+ + ++FLH+ + ++K++NILL + KL+
Sbjct: 114 DEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLT 158
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 2e-10
Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 18/150 (12%)
Query: 458 LIGEGSQGQLYKGFLTD-GSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+G+G + ++ D + K + L + H + + + + L H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG-F 80
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
VF+VLE SL + K++ L P+ + G Q+
Sbjct: 81 HGFF-------EDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQY 130
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKLS 603
LH + +LK N+ L++ L K+
Sbjct: 131 LH---RNRVIHRDLKLGNLFLNEDLEVKIG 157
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 459 IGEGSQGQLYKGFLT-----DGSRVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG G++ G +V+VK LK + L + +E+L L H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C + G+ + L++E + +GSL++YL K K+ + Q++ + +G+
Sbjct: 89 KGICT------EDGGNGIKLIMEFLPSGSLKEYLP--KNKNKINLKQQLKYAVQICKGMD 140
Query: 573 FLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+L + L N+L++ K+
Sbjct: 141 YLGS--------RQYVHRDLAARNVLVESEHQVKIG 168
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-10
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
++FD +G+G G +Y + +++K L +L++ + L + +E+ S LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ + + + D ++L+LE G L L + D + M +
Sbjct: 74 PNILRMYNY----FHDR----KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
A + + H + ++K EN+L+ K++ G+++ PS R T+
Sbjct: 126 A---LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM 172
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 37/159 (23%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHLV 510
IGEG G +++G V++K K R + +Q + + H H+V
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR---EKFLQEALTMRQFDHPHIV 79
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
++G T + V++++E + G LR +L +K L + +
Sbjct: 80 KLIGVI---------TENPVWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTA 128
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +L H +A N+L+ KL
Sbjct: 129 LAYLESKRFVHRDIA---------ARNVLVSSNDCVKLG 158
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 31/198 (15%)
Query: 413 GSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNL------IGEGSQGQ 466
G + + + + DP L IGEGS G
Sbjct: 10 GVDLGTENLYFQSGVVTHEQF---------KAALRMVVDQGDPRLLLDSYVKIGEGSTGI 60
Query: 467 LYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525
+ G +V+VK + L+++ + L V ++ +H ++V + +Y
Sbjct: 61 VCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK----SYL---- 112
Query: 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585
G +++++E + G+L D ++ + L Q + + + +LH A G+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVS----QVRLNEEQIATVCEAVLQALAYLH---AQGVIHR 165
Query: 586 NLKTENILLDKALTAKLS 603
++K+++ILL KLS
Sbjct: 166 DIKSDSILLTLDGRVKLS 183
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 39/194 (20%), Positives = 64/194 (32%), Gaps = 23/194 (11%)
Query: 413 GSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF- 471
+P S R + + G P R S + +F + +G GS G+++K
Sbjct: 24 HQLQPRRVSFRGEASETLQSPGYDPSRPESFFQ-----QSFQRLSRLGHGSYGEVFKVRS 78
Query: 472 LTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGS 528
DG +VK R + V K+ +H V + G
Sbjct: 79 KEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR--------LEQAWEEGG 130
Query: 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588
++L E SL+ + W L Q + + LH+ G+ ++K
Sbjct: 131 ILYLQTEL-CGPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALAHLHS---QGLVHLDVK 184
Query: 589 TENILLDKALTAKL 602
NI L KL
Sbjct: 185 PANIFLGPRGRCKL 198
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 30/151 (19%), Positives = 66/151 (43%), Gaps = 24/151 (15%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
++ P +++ E ++ G+L DYL + + + + + + +++L
Sbjct: 80 ---REPP-----FYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEK- 129
Query: 578 VAPGIFGNN-----LKTENILLDKALTAKLS 603
N L N L+ + K++
Sbjct: 130 -------KNFIHRDLAARNCLVGENHLVKVA 153
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 4e-10
Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 10/95 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS----RVSVKCLK--LKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+G+G G + + L +V+VK LK + + ++ + + H H+ +
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 513 LGHCILTYQDHPNT-GSTVFLVLEHISNGSLRDYL 546
+G + + ++L + +G L +L
Sbjct: 91 VGVSL---RSRAKGRLPIPMVILPFMKHGDLHAFL 122
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRHLPQSLMQHVELLS 502
F+ +L +G+G+ G + G V+VK L+ + + +E+L
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
L+H ++V G + + L++E++ GSLRDYL K K+ + + +
Sbjct: 67 SLQHDNIVKYKG-VCYSAGRRN-----LKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQ 118
Query: 563 IIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+G+++L T L T NIL++ K+
Sbjct: 119 YTSQICKGMEYLGT--------KRYIHRDLATRNILVENENRVKIG 156
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 19/159 (11%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRHLPQSLMQH 497
E + + +L+GEG+ Q+Y+ D + +K K Q
Sbjct: 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
+E L + + +Q+ LV E S G+L + + +K
Sbjct: 118 MERLKPSMQHMFMKFYSAHL--FQNG------SVLVGELYSYGTLLNAINLYKNTPEKVM 169
Query: 558 PQRMAIIIGA--TRGVQFLHTGVAPGIFGNNLKTENILL 594
PQ + I ++ +H I ++K +N +L
Sbjct: 170 PQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFIL 205
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 5e-10
Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 18/183 (9%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L + LS G+ + +L L + N I ++ + +L + + L
Sbjct: 37 QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQI-TDLA-PLKNLTKITELEL 92
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLK 237
+ N L +V + L ++ L+L L+ N+ + L N + + I S L
Sbjct: 93 SGNPLK-NVSAIAGLQSIKTLDLTSTQIT-DVTPLAGLSNLQVLYLDLNQI-TNI-SPLA 148
Query: 238 NFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
L+ I + + + L +L + L N++S+ P ++ L V +
Sbjct: 149 GLTNLQYLSIGNAQ----VSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHL 202
Query: 296 SHN 298
+N
Sbjct: 203 KNN 205
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 6e-09
Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 18/201 (8%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYG 162
L + N + + + L ++K L L S + PL N L+VL + N I
Sbjct: 88 TELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSN----LQVLYLDLNQI-T 142
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVS 220
I + L NL+ + + + ++ + L L L L N L+ N++
Sbjct: 143 NIS-PLAGLTNLQYLSIGNAQVS-DLTPLANLSKLTTLKADDNKI-SDISPLASLPNLIE 199
Query: 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYL-NLAGNQLSEA 279
V L+NN + S L N L +++ + +L + +G ++
Sbjct: 200 VHLKNNQISDV--SPLANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPIA-- 255
Query: 280 LPVNISCSAKLNFVEISHNLL 300
P IS + ++ NL
Sbjct: 256 -PATISDNGTYASPNLTWNLT 275
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 18/198 (9%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
+LSA + L+NL L L + P + + L +S N + +
Sbjct: 44 TTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL-KNV 100
Query: 165 PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVI 222
I L+++K++ L + V L L L+ L L N L+ N+ +
Sbjct: 101 S-AIAGLQSIKTLDLTSTQIT-DVTPLAGLSNLQVLYLDLNQIT-NISPLAGLTNLQYLS 157
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEAL 280
+ N + + L N +L N I S L SLP+++ ++L NQ+S+
Sbjct: 158 IGNAQVSDL--TPLANLSKLTTLKADDNK----ISDISPLASLPNLIEVHLKNNQISDVS 211
Query: 281 PVNISCSAKLNFVEISHN 298
P ++ ++ L V +++
Sbjct: 212 P--LANTSNLFIVTLTNQ 227
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 6e-10
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQRHLPQSLMQHVELLS 502
F+ +L +G+G+ G + G V+VK L+ + + +E+L
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
L+H ++V G + + L++E++ GSLRDYL K K+ + + +
Sbjct: 98 SLQHDNIVKYKG-VCYSAGRRN-----LKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQ 149
Query: 563 IIIGATRGVQFLHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
+G+++L T L T NIL++ K+
Sbjct: 150 YTSQICKGMEYLGT--------KRYIHRDLATRNILVENENRVKIG 187
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 7e-10
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 36/159 (22%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHLV 510
+G G G++ G L S+ V++K LK KQR + + ++ + H +++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIMGQFDHPNII 109
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G V +V E++ NGSL +L K Q + ++ G G
Sbjct: 110 RLEGVVTK--------SKPVMIVTEYMENGSLDSFLR--KHDAQFTVIQLVGMLRGIASG 159
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++L H +A NIL++ L K+S
Sbjct: 160 MKYLSDMGYVHRDLA---------ARNILINSNLVCKVS 189
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 7e-10
Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLV 510
+F P +++G G++G + + D V+VK + + + V+LL + H +++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSF---ADREVQLLRESDEHPNVI 81
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
T +D ++ +E + +L++Y+ +K + + ++ T G
Sbjct: 82 RYFC----TEKDRQF----QYIAIELCA-ATLQEYVE--QKDFAHLGLEPITLLQQTTSG 130
Query: 571 VQFLHTGVAPGIFGNNLKTENILL-----DKALTAKLS 603
+ LH + I +LK NIL+ + A +S
Sbjct: 131 LAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMIS 165
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 8e-10
Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 36/159 (22%)
Query: 459 IGEGSQGQLYKGFLTDGSR----VSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHLV 510
IG G G++ G L + V++K LK +QR + + ++ + H +++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDFLSEASIMGQFDHPNII 113
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G G +V E++ NGSL +L Q + ++ G G
Sbjct: 114 RLEGVVT--------RGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAG 163
Query: 571 VQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++L H +A N+L+D L K+S
Sbjct: 164 MRYLSDLGYVHRDLA---------ARNVLVDSNLVCKVS 193
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 8e-10
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+F NL+G+GS +Y+ + G V++K + + + + Q + V++ +L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR--MAII 564
++ + + ++D V+LVLE NG + YL + + K + R M I
Sbjct: 71 PSILELYNY----FEDSNY----VYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQI 121
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
I + +LH + GI +L N+LL + + K++
Sbjct: 122 ITG---MLYLH---SHGILHRDLTLSNLLLTRNMNIKIA 154
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-09
Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 16/152 (10%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKL-R 505
T F IG G G ++K DG ++K K Q+ ++ V + L +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAII 564
H H+V Y + + E+ + GSL D +++ + K + ++
Sbjct: 70 HSHVVR--------YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 121
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
+ RG++++H + + ++K NI + +
Sbjct: 122 LQVGRGLRYIH---SMSLVHMDIKPSNIFISR 150
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 43/190 (22%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSL 171
LS LK L L + + +PS L L++ I L
Sbjct: 132 FVYLSKLKELWLRNNPIESIPSYAFNRIPS-------LRRLDLGELKRLSYISEGAFEGL 184
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
NL+ + LA L +P+L L+ L+EL+L GN S
Sbjct: 185 SNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHL----------------------SA 221
Query: 232 IPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCS-A 288
I G + L++ + + I+ F L S++ +NLA N L+ LP ++
Sbjct: 222 IRPGSFQGLMHLQKLWMIQSQIQV-IERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLH 279
Query: 289 KLNFVEISHN 298
L + + HN
Sbjct: 280 HLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 173 NLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGN---DFGPK-FPSLSKNIVSVILRNN 226
N + + L +N + + + L LE L L N F L+ N+ ++ L +N
Sbjct: 65 NTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLA-NLNTLELFDN 122
Query: 227 SLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAG-NQLSEALPVN 283
L + IP+G +LK+ + +N I S+ F+ +PS+ L+L +LS +
Sbjct: 123 RLTT-IPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSLRRLDLGELKRLSY-ISEG 179
Query: 284 I-SCSAKLNFVEISHNLL 300
+ L ++ ++ L
Sbjct: 180 AFEGLSNLRYLNLAMCNL 197
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 31/173 (17%), Positives = 65/173 (37%), Gaps = 35/173 (20%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS----RVSVKCLK----LKQRHLPQSLMQ 496
I ++ +IG G G +Y G L D +VK L + + +
Sbjct: 19 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLT 75
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
++ H +++S+LG C + +VL ++ +G LR+++ +
Sbjct: 76 EGIIMKDFSHPNVLSLLGIC--LRSEGS-----PLVVLPYMKHGDLRNFIR--NETHNPT 126
Query: 557 WPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ + +G+++L H +L N +LD+ T K++
Sbjct: 127 VKDLIGFGLQVAKGMKYLASKKFVH---------RDLAARNCMLDEKFTVKVA 170
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 29/155 (18%)
Query: 459 IGEGSQGQLYKGFLTDGS----RVSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+GEG G++Y+G T+ V+VK K + M ++ L H H+V ++
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G ++++E G L YL + K+ LK + + + + +
Sbjct: 80 GII---------EEEPTWIIMELYPYGELGHYLE--RNKNSLKVLTLVLYSLQICKAMAY 128
Query: 574 LHTGVAPGIFGNN-----LKTENILLDKALTAKLS 603
L + N + NIL+ KL
Sbjct: 129 LES--------INCVHRDIAVRNILVASPECVKLG 155
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
+ +L + + N S++ + +++ I + I L N+ + L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDI-KSVQ-GIQYLPNVTKLFL 75
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLK 237
N L + L L L L L N SL K + S+ L +N + S+I +GL
Sbjct: 76 NGNKLT-DIKPLANLKNLGWLFLDENKV-KDLSSLKDLKKLKSLSLEHNGI-SDI-NGLV 131
Query: 238 NFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
+ QL+ + +N I + L L + L+L NQ+S+ +P ++ KL + +
Sbjct: 132 HLPQLESLYLGNNK----ITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185
Query: 296 SHNLL 300
S N +
Sbjct: 186 SKNHI 190
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 47/217 (21%), Positives = 77/217 (35%), Gaps = 22/217 (10%)
Query: 120 LTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+ L N+ L L L PL + N L L + N + ++ + LK LKS+
Sbjct: 64 IQYLPNVTKLFLNGNKLTDIKPLANLKN----LGWLFLDENKV-KDLSS-LKDLKKLKSL 117
Query: 178 VLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSG 235
L N ++ + L L LE L LG N LS + ++ L +N +
Sbjct: 118 SLEHNGIS-DINGLVHLPQLESLYLGNNKI-TDITVLSRLTKLDTLSLEDNQISDI--VP 173
Query: 236 LKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
L +L+ +S N+ I L L ++ L L + + S N V
Sbjct: 174 LAGLTKLQNLYLSKNH----ISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 229
Query: 294 EISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330
+ + L+ P I + W+ N
Sbjct: 230 KNTDGSLVT--PEIISDDGDYEKPNVKWHLPEFTNEV 264
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 18/201 (8%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRF---WSLEVLNISSNFIY 161
L N N L L NL L L + ++ L+ L++ N I
Sbjct: 71 TKLFLNGNKLTDIKPLANLKNLGWLFLDENKV-----KDLSSLKDLKKLKSLSLEHNGI- 124
Query: 162 GEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSK--NIV 219
+I + L L+S+ L +N + + L RL L+ L+L N L+ +
Sbjct: 125 SDIN-GLVHLPQLESLYLGNNKIT-DITVLSRLTKLDTLSLEDNQI-SDIVPLAGLTKLQ 181
Query: 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279
++ L N + S++ L L ++ S + + +L + L
Sbjct: 182 NLYLSKNHI-SDL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVT- 238
Query: 280 LPVNISCSAKLNFVEISHNLL 300
P IS + +L
Sbjct: 239 -PEIISDDGDYEKPNVKWHLP 258
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 39/245 (15%), Positives = 78/245 (31%), Gaps = 43/245 (17%)
Query: 378 VVFGLLVLVVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPP 437
++ G LV + ER++ + + K + S V + +
Sbjct: 313 LIDGYCRLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIID 372
Query: 438 FRGFSLEEIEEATNNFDPTNL-----IGEGSQGQLYKGFLTDGSR----VSVKCLK---- 484
+ + IGEG G +++G V++K K
Sbjct: 373 EED-TYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS 431
Query: 485 LKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRD 544
R + +Q + + H H+V ++G T + V++++E + G LR
Sbjct: 432 DSVR---EKFLQEALTMRQFDHPHIVKLIGVI---------TENPVWIIMELCTLGELRS 479
Query: 545 YLTDWKKKDMLKWPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKAL 598
+L +K L + + + +L H +A N+L+
Sbjct: 480 FLQ--VRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA---------ARNVLVSSND 528
Query: 599 TAKLS 603
KL
Sbjct: 529 CVKLG 533
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 21/197 (10%)
Query: 386 VVIRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEE 445
+++ R G E GS + +A+ +
Sbjct: 25 ILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGAN-TVHIDLSALNPELVQAVQHVV 83
Query: 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGS----RVSVKCLK----LKQRHLPQSLMQH 497
I ++ +IG G G +Y G L D +VK L + + +
Sbjct: 84 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTE 140
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
++ H +++S+LG C + +VL ++ +G LR+++ +
Sbjct: 141 GIIMKDFSHPNVLSLLGIC--LRSEGS-----PLVVLPYMKHGDLRNFIR--NETHNPTV 191
Query: 558 PQRMAIIIGATRGVQFL 574
+ + +G++FL
Sbjct: 192 KDLIGFGLQVAKGMKFL 208
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 35/185 (18%), Positives = 75/185 (40%), Gaps = 17/185 (9%)
Query: 120 LTKLSNLKVLS-LVSLGLWGPLPSKI---NRFWSLEVLNISSNFIYGEIPMEITSLKNLK 175
+ ++ L+ V L + + ++ N ++ I + + NLK
Sbjct: 9 INQVFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNI-QSLA-GMQFFTNLK 66
Query: 176 SIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSG 235
+ L+ N ++ + L+ L LEEL++ N S + + L NN LR
Sbjct: 67 ELHLSHNQIS-DLSPLKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNELRD--TDS 123
Query: 236 LKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293
L + L+ I +N ++ L L + L+L GN+++ ++ K+N++
Sbjct: 124 LIHLKNLEILSIRNNK----LKSIVMLGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWI 177
Query: 294 EISHN 298
+++
Sbjct: 178 DLTGQ 182
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 3e-08
Identities = 42/225 (18%), Positives = 78/225 (34%), Gaps = 28/225 (12%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKI---NRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176
+LS ++ + + + + F +L+ L++S N I ++ + L L+
Sbjct: 37 QKELSGVQNFNGDNSNI-----QSLAGMQFFTNLKELHLSHNQI-SDLSP-LKDLTKLEE 89
Query: 177 IVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPS 234
+ + N L ++ + L L L N+ SL KN+ + +RNN L+S
Sbjct: 90 LSVNRNRLK-NLNGIPSACL-SRLFLDNNEL-RDTDSLIHLKNLEILSIRNNKLKS--IV 144
Query: 235 GLKNFDQLKQFDISSNNFVGPIQ--SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNF 292
L +L+ D+ N I L L + +++L G + N
Sbjct: 145 MLGFLSKLEVLDLHGNE----ITNTGGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNT 200
Query: 293 VEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKYQHPYSF 337
V+ I P I + W + Y F
Sbjct: 201 VKDPDGRWIS--PYYISNGGSYVDGCVLWELPVYTDEVS---YKF 240
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 24/161 (14%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ + S V+VK LK + + ELL+ L+H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
G C P + +V E++ +G L +L M+ + G Q
Sbjct: 83 YGVCG---DGDP-----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 573 FLH--TGVAPG---IFGNN-----LKTENILLDKALTAKLS 603
LH + +A G + + L T N L+ L K+
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG 175
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 20/135 (14%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS----RVSVKCLK-LKQRHLPQSLMQHVE 499
I +IG+G G +Y G D + + ++K L + + ++ ++
Sbjct: 15 LIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL 74
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
L+ L H ++++++G + ++L ++ +G L ++ +
Sbjct: 75 LMRGLNHPNVLALIGIML---PPEG----LPHVLLPYMCHGDLLQFIRS--PQRNPTVKD 125
Query: 560 RMAIIIGATRGVQFL 574
++ + RG+++L
Sbjct: 126 LISFGLQVARGMEYL 140
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRHLV 510
F IG+GS G+++KG V++K + L++ + + Q + +LS+ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G +Y + +++++E++ GS D L + L Q I+ +G
Sbjct: 84 KYYG----SYLK----DTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKG 131
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ +LH+ ++K N+LL + KL
Sbjct: 132 LDYLHSE---KKIHRDIKAANVLLSEHGEVKL 160
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 37/160 (23%)
Query: 459 IGEGSQGQLYKGFLTDGS-----RVSVKCLK----LKQRHLPQSLMQHVELLSKLRHRHL 509
IG G G++YKG L S V++K LK KQR + ++ + H ++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR---VDFLGEAGIMGQFSHHNI 108
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ + G + ++ E++ NG+L +L +K Q + ++ G
Sbjct: 109 IRLEGVIS--------KYKPMMIITEYMENGALDKFLR--EKDGEFSVLQLVGMLRGIAA 158
Query: 570 GVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+++L H +A NIL++ L K+S
Sbjct: 159 GMKYLANMNYVHRDLA---------ARNILVNSNLVCKVS 189
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 39/192 (20%), Positives = 67/192 (34%), Gaps = 15/192 (7%)
Query: 120 LTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
KL+ L LSL S L G SL+ L++S N + + L+ L+ +
Sbjct: 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGV-ITMSSNFLGLEQLEHL 106
Query: 178 VLADNLLNGSVPD---LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRNNSLRS 230
+ L + + L L L++ F LS ++ + + NS +
Sbjct: 107 DFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS-SLEVLKMAGNSFQE 164
Query: 231 EIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCSA 288
L D+S + SL S+ LN++ N +L C
Sbjct: 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLN 223
Query: 289 KLNFVEISHNLL 300
L ++ S N +
Sbjct: 224 SLQVLDYSLNHI 235
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 26/187 (13%)
Query: 107 LSAN--FNIDRFFTILTKLSNL-----KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF 159
LS N + F L +L +L + + ++ L + L L+IS
Sbjct: 85 LSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN-------LIYLDISHTH 137
Query: 160 IYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDF----GPKFP 212
I L +L+ + +A N + L L L+L F
Sbjct: 138 T-RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 196
Query: 213 SLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSIL-YLN 270
SLS ++ + + +N+ S + + K + L+ D S N+ + + L PS L +LN
Sbjct: 197 SLS-SLQVLNMSHNNFFS-LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 254
Query: 271 LAGNQLS 277
L N +
Sbjct: 255 LTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 9e-07
Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 16/154 (10%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDF------GPKFPSL 214
+P I + + L N L S+P +L L +L+L N
Sbjct: 21 SVPTGI--PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT 77
Query: 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAG 273
+ ++ + L N + + + S +QL+ D +N S SL +++YL+++
Sbjct: 78 T-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 135
Query: 274 NQLSEALPVNI-SCSAKLNFVEISHNLLIGKLPS 306
I + + L ++++ N
Sbjct: 136 THTRV-AFNGIFNGLSSLEVLKMAGNSFQENFLP 168
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTDGS------RVSVKCLKLKQRHLPQSLMQHVELL 501
++ +GEG+ G+++ + V+VK LK Q + ELL
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ L+H+H+V G C + P + +V E++ +G L +L
Sbjct: 98 TMLQHQHIVRFFGVCT---EGRP-----LLMVFEYMRHGDLNRFL 134
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 6e-09
Identities = 47/190 (24%), Positives = 70/190 (36%), Gaps = 43/190 (22%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSL 171
LS L+ L L + + +PS L L++ I L
Sbjct: 143 FEYLSKLRELWLRNNPIESIPSYAFNRVPS-------LMRLDLGELKKLEYISEGAFEGL 195
Query: 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSE 231
NLK + L + +P+L LV LEEL + GN F E
Sbjct: 196 FNLKYLNLGMCNIK-DMPNLTPLVGLEELEMSGNHF----------------------PE 232
Query: 232 IPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNISCS-A 288
I G LK+ + ++ I+ F L S++ LNLA N LS +LP ++
Sbjct: 233 IRPGSFHGLSSLKKLWVMNSQVSL-IERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLR 290
Query: 289 KLNFVEISHN 298
L + + HN
Sbjct: 291 YLVELHLHHN 300
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 7e-09
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 31/165 (18%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLK----LKQRHLPQSLMQHVELLSKLRHRH 508
+GE G++YKG L + V++K LK R + L ++L+H +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR---EEFRHEAMLRARLQHPN 73
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V +LG +D P + ++ + S+G L ++L + + A
Sbjct: 74 VVCLLGVV---TKDQP-----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 569 RGVQFLH--TGVAPG---IFGNN-----LKTENILLDKALTAKLS 603
F+H +A G + ++ L T N+L+ L K+S
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 170
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 7e-09
Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN 205
+L+ L ++SN I I + +SL +L+ + L+ N L ++ + L L LNL GN
Sbjct: 77 NLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLSYNYL-SNLSSSWFKPLSSLTFLNLLGN 134
Query: 206 DF-----GPKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSF 259
+ F L+K + + ++ I L++ +I +++ +
Sbjct: 135 PYKTLGETSLFSHLTKLQILRVGNMDTFTK-IQRKDFAGLTFLEELEIDASDLQS-YEPK 192
Query: 260 LF-SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
S+ ++ +L L Q L + + ++ + +E+ L
Sbjct: 193 SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDL 234
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 36/203 (17%), Positives = 72/203 (35%), Gaps = 33/203 (16%)
Query: 119 ILTKLSNLKVL--------SLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-T 169
LS+L L +L L+ L L++L + + + +I +
Sbjct: 119 WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTK-------LQILRVGNMDTFTKIQRKDFA 171
Query: 170 SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDF---GPKFPSLSKNIVSVILR 224
L L+ + + + L S L+ + + L L F ++ ++ + LR
Sbjct: 172 GLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELR 230
Query: 225 NNSLR----SEIPSG----LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276
+ L SE+ +G L + I+ + + L + +L L + NQL
Sbjct: 231 DTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQL 289
Query: 277 SEALPVNISCS-AKLNFVEISHN 298
++P I L + + N
Sbjct: 290 K-SVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 19/147 (12%), Positives = 47/147 (31%), Gaps = 15/147 (10%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSI 177
L+ L+ L + + L P + ++ L + + +++ +
Sbjct: 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECL 227
Query: 178 VLADNLLN---------GSVPDLQRLVLLEELNLGGNDF--GPKFPSLSKNIVSVILRNN 226
L D L+ G L + + + K + ++ + N
Sbjct: 228 ELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRN 287
Query: 227 SLRSEIPSG-LKNFDQLKQFDISSNNF 252
L+S +P G L++ + +N +
Sbjct: 288 QLKS-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLK-LKQRHLPQSLMQHVELLSKLRHRHLVS 511
+G G+ G++Y+G ++ +V+VK L + + ++SK H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----TDWKKKDMLKWPQRMAIIIGA 567
+G + Q P F+++E ++ G L+ +L + L + +
Sbjct: 98 CIGVSL---QSLP-----RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 568 TRGVQFL 574
G Q+L
Sbjct: 150 ACGCQYL 156
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 459 IGEGSQGQLYKGF--LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
IG+G+ ++ LT G V++K + +L L + L + V ++ L H ++V +
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLF 80
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATRG 570
I T T++L++E+ S G + DYL +K + + I+ A
Sbjct: 81 -EVI-------ETEKTLYLIMEYASGGEVFDYLV---AHGRMKEKEARSKFRQIVSA--- 126
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
VQ+ H I +LK EN+LLD + K++
Sbjct: 127 VQYCH---QKRIVHRDLKAENLLLDADMNIKIA 156
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 29/202 (14%)
Query: 389 RRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEE 448
++ Y + P ++ + P +
Sbjct: 9 HHDYDIPTTENLYFQGAMGS----ELQSPEYKLSKLRTSTIMTDYN-PNYCFAGKTSSIS 63
Query: 449 ATNNFDPTNL-----IGEGSQGQLYKGFLTDGS------RVSVKCLK-LKQRHLPQSLMQ 496
N+ +G G+ G++Y+G ++ +V+VK L + +
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----TDWKKK 552
++SK H+++V +G + Q P F++LE ++ G L+ +L +
Sbjct: 124 EALIISKFNHQNIVRCIGVSL---QSLP-----RFILLELMAGGDLKSFLRETRPRPSQP 175
Query: 553 DMLKWPQRMAIIIGATRGVQFL 574
L + + G Q+L
Sbjct: 176 SSLAMLDLLHVARDIACGCQYL 197
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 20/168 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHL 509
N ++G GS G + G V+VK + L + ++LL++ H ++
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFC--DIALMEIKLLTESDDHPNV 71
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAIII 565
+ + +++ LE N +L+D + + + K ++++
Sbjct: 72 IRYYC----SETTDRF----LYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613
GV LH + I +LK +NIL+ + ++
Sbjct: 123 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 44/223 (19%), Positives = 84/223 (37%), Gaps = 30/223 (13%)
Query: 74 NSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSA----NFNIDRFFT----ILTKLSN 125
++ V ++ K + F F S SL A D F I SN
Sbjct: 246 HTTVWYFSISNVK----LQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSN 301
Query: 126 LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLN 185
+ + + G ++ L+ S+N + + L L++++L N L
Sbjct: 302 MNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK 361
Query: 186 GSVPDL----QRLVLLEELNLGGNDFGPKFPSLS----KNIVSVILRNNSLRSEIPSGLK 237
+ + ++ L++L++ N K+++S+ + +N L I L
Sbjct: 362 -ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL- 419
Query: 238 NFDQLKQFDISSNNFVGPIQSF---LFSLPSILYLNLAGNQLS 277
++K D+ SN I+S + L ++ LN+A NQL
Sbjct: 420 -PPRIKVLDLHSNK----IKSIPKQVVKLEALQELNVASNQLK 457
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 12/172 (6%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDF 207
L +L IS N I + + + + L+ + L+ N L + V L+ L+L N F
Sbjct: 46 KLRILIISHNRI-QYLDISVFKFNQELEYLDLSHNKLV-KIS-CHPTVNLKHLDLSFNAF 102
Query: 208 -----GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262
+F ++ + + L L + + + K + +
Sbjct: 103 DALPICKEFGNM-SQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED--PEG 159
Query: 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314
L +L + I + + + + L S L+
Sbjct: 160 LQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLS 211
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 30/227 (13%)
Query: 73 TNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQ-SLSANFNIDRFFTILTKLSNLKVLSL 131
+N + TV G + K S S N D F L+ L+ L L
Sbjct: 300 SNMNIKNFTVSGTRMVHM----LCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLIL 355
Query: 132 VSLGLWGPLPSKINRFW---SLEVLNISSNFI-YGEIPMEITSLKNLKSIVLADNLLNGS 187
L L SL+ L+IS N + Y E + + K+L S+ ++ N+L +
Sbjct: 356 QMNQL-KELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414
Query: 188 VPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVS------VILRNNSLRSEIPSG-LKNFD 240
+ ++ L+L N K S+ K +V + + +N L+S +P G
Sbjct: 415 IFR-CLPPRIKVLDLHSN----KIKSIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLT 468
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
L++ + +N + S P I YL+ N+ S+ + CS
Sbjct: 469 SLQKIWLHTNPWDC-------SCPRIDYLSRWLNKNSQKEQGSAKCS 508
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 45/211 (21%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGND 206
+LNIS N+I +I SL L+ ++++ N + + + LE L+
Sbjct: 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQELEYLD----- 75
Query: 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNF-VGPIQSFLFSLPS 265
L +N L I LK D+S N F PI ++
Sbjct: 76 ----------------LSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQ 116
Query: 266 ILYLNLAGNQLSEA-----------------LPVNISCSAKLNFVEISHNLLIGKLPSCI 308
+ +L L+ L ++ + + L P+
Sbjct: 117 LKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNK 176
Query: 309 GSNSLNRTVVSTWNCLSGVNTKYQHPYSFCR 339
+ + V T L N K + C
Sbjct: 177 EFHFILDVSVKTVANLELSNIKCVLEDNKCS 207
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 21/195 (10%)
Query: 119 ILTKLSNLKVLSLVSLGL-WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+ + L N+ + + L L L IS + IP ++ + L +
Sbjct: 142 VFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKL-TGIPKDL--PETLNEL 198
Query: 178 VLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPK-FPSLSKNIVSVILRNNSLRSE 231
L N + ++ L R L L LG N L + + L NN L S
Sbjct: 199 HLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLP-TLRELHLDNNKL-SR 255
Query: 232 IPSGLKNFDQLKQFDISSNNFVG-PIQSF-----LFSLPSILYLNLAGNQLSEAL--PVN 283
+P+GL + L+ + +NN + F ++L N + P
Sbjct: 256 VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPAT 315
Query: 284 ISCSAKLNFVEISHN 298
C ++ +
Sbjct: 316 FRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 44/217 (20%), Positives = 79/217 (36%), Gaps = 44/217 (20%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
+ L L+ L + L +P + SL L I N I ++P + + L+N+ I
Sbjct: 98 FSPLRKLQKLYISKNHL-VEIPPNL--PSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIE 153
Query: 179 LADNLL-NGSVPD-------LQRLVL---------------LEELNLGGNDF----GPKF 211
+ N L N L L + L EL+L N
Sbjct: 154 MGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDL 213
Query: 212 PSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLN 270
S + + L +N +R I +G L L++ + +N + + L L + +
Sbjct: 214 LRYS-KLYRLGLGHNQIRM-IENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVY 270
Query: 271 LAGNQLSEALPVNISCS-------AKLNFVEISHNLL 300
L N +++ + VN C A N + + +N +
Sbjct: 271 LHTNNITK-VGVNDFCPVGFGVKRAYYNGISLFNNPV 306
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 459 IGEGSQGQLYKGFLTDG------SRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVS 511
+GEG G++ K + V+VK LK + L+ +L ++ H H++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ G C QD P + L++E+ GSLR +L
Sbjct: 91 LYGACS---QDGP-----LLLIVEYAKYGSLRGFL 117
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVE 499
L + + F+ L+G G+ GQ+YKG + G ++K + + + + Q +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEIN 72
Query: 500 LLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+L K HR++ + G + ++ P ++LV+E GS+ D + + K LK
Sbjct: 73 MLKKYSHHRNIATYYG-AFIK-KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEE 129
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
I RG+ LH + ++K +N+LL + KL
Sbjct: 130 WIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKL 170
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 457 NLIGEGSQGQLYKGFLTDGS---RVSVKCLK----LKQRHLPQSLMQHVELLSKL-RHRH 508
++IGEG+ GQ+ K + ++K +K + +E+L KL H +
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH---RDFAGELEVLCKLGHHPN 87
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++LG C ++L +E+ +G+L D+L
Sbjct: 88 IINLLGACE---HRGY-----LYLAIEYAPHGNLLDFL 117
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 459 IGEGSQGQLYKGFLTDGS------RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVS 511
+G+GS G +Y+G RV++K + + ++ + H+V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+LG Q P +++E ++ G L+ YL
Sbjct: 93 LLGVVS---QGQP-----TLVIMELMTRGDLKSYL 119
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-08
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 26/154 (16%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVE----LLSKLRHRHLVSI 512
+G G+ G++ G G +V+VK L +Q+ ++ ++ L RH H++ +
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATR 569
+ +++ T + F+V+E++S G L DY+ K ++ + + I+ A
Sbjct: 77 --YQVIS------TPTDFFMVMEYVSGGELFDYIC---KHGRVEEMEARRLFQQILSA-- 123
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
V + H + +LK EN+LLD + AK++
Sbjct: 124 -VDYCH---RHMVVHRDLKPENVLLDAHMNAKIA 153
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 49/209 (23%), Positives = 79/209 (37%), Gaps = 25/209 (11%)
Query: 404 SVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNL----- 458
S P ++ M G ++ E DP L
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRA-GSLKDPDVAELFFKDDPEKLFSDLR 60
Query: 459 -IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQHVELLSKLRHRHLVSIL 513
IG GS G +Y + + V++K + + Q +++ V L KLRH + +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQF 573
G Y T +LV+E+ GS D L KK L+ + A+ GA +G+ +
Sbjct: 121 G----CYL----REHTAWLVMEYCL-GSASDLLEVHKKP--LQEVEIAAVTHGALQGLAY 169
Query: 574 LHTGVAPGIFGNNLKTENILLDKALTAKL 602
LH+ + ++K NILL + KL
Sbjct: 170 LHSH---NMIHRDVKAGNILLSEPGLVKL 195
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 5e-08
Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 42/173 (24%)
Query: 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSL--------EVLNISSNFIYGEIPMEITS 170
L S LK + + L SK S+ VL+++ + + +
Sbjct: 404 TLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDL--TVLCHLEQ 461
Query: 171 LKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230
L + + L+ N L P L L LE L N + +V
Sbjct: 462 LLLVTHLDLSHNRLRALPPALAALRCLEVLQASDN-----------ALENV--------- 501
Query: 231 EIPSGLKNFDQLKQFDISSNNFVGPIQSF-----LFSLPSILYLNLAGNQLSE 278
G+ N +L++ + +N +Q L S P ++ LNL GN L +
Sbjct: 502 ---DGVANLPRLQELLLCNNR----LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 5e-08
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 459 IGEGSQGQLYKGFLTDG------SRVSVKCLK----LKQRHLPQSLMQHVELLSKLRHRH 508
IGEG+ G++++ + V+VK LK + + L+++ + +
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ---ADFQREAALMAEFDNPN 111
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+V +LG C P + L+ E+++ G L ++L
Sbjct: 112 IVKLLGVCA---VGKP-----MCLLFEYMAYGDLNEFL 141
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 6e-08
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 21/99 (21%)
Query: 459 IGEGSQGQLYKGFLTD------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-RHR 507
+G G+ GQ+ + V+VK LK + ++LM +++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RALMSELKILIHIGHHL 91
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++V++LG C T P + +++E G+L YL
Sbjct: 92 NVVNLLGAC--TKPGGP-----LMVIVEFCKFGNLSTYL 123
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 7e-08
Identities = 41/196 (20%), Positives = 67/196 (34%), Gaps = 29/196 (14%)
Query: 120 LTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSL 171
NL +L L + + L LE L++S N + L
Sbjct: 52 FRACRNLTILWLHSNVLARIDAAAFTGLAL-------LEQLDLSDNAQLRSVDPATFHGL 104
Query: 172 KNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILRN 225
L ++ L L + + L L+ L L N P F L N+ + L
Sbjct: 105 GRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLG-NLTHLFLHG 162
Query: 226 NSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVN 283
N + S +P + L + + N + F L ++ L L N LS ALP
Sbjct: 163 NRISS-VPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRDLGRLMTLYLFANNLS-ALPTE 219
Query: 284 I-SCSAKLNFVEISHN 298
+ L ++ ++ N
Sbjct: 220 ALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 29/174 (16%)
Query: 120 LTKLSNLKVLSL--------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TS 170
T L+ L+ L L V + L L L++ + E+ +
Sbjct: 76 FTGLALLEQLDLSDNAQLRSVDPATFHGLGR-------LHTLHLDRCGL-QELGPGLFRG 127
Query: 171 LKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILR 224
L L+ + L DN L ++PD + L L L L GN P+ F L ++ ++L
Sbjct: 128 LAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH-SLDRLLLH 185
Query: 225 NNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLF-SLPSILYLNLAGNQL 276
N + + ++ +L + +NN + + L ++ YL L N
Sbjct: 186 QNRVAH-VHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 19/149 (12%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLL 197
+P I + + + + N I + +NL + L N+L + L LL
Sbjct: 26 VPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLALL 82
Query: 198 EELNLGGNDFGPKFPSLS-------KNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISS 249
E+L+L N + S+ + ++ L L+ + G + L+ +
Sbjct: 83 EQLDLSDN---AQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQD 138
Query: 250 NNFVGPIQSFLFS-LPSILYLNLAGNQLS 277
N + F L ++ +L L GN++S
Sbjct: 139 NALQA-LPDDTFRDLGNLTHLFLHGNRIS 166
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 119 ILTKLSNLKVLSL-------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TS 170
L L L L + GL+ L + L+ L + N + +P +
Sbjct: 100 TFHGLGRLHTLHLDRCGLQELGPGLFRGLAA-------LQYLYLQDNAL-QALPDDTFRD 151
Query: 171 LKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFG--PK--FPSLSKNIVSVILR 224
L NL + L N ++ SVP+ + L L+ L L N F L ++++ L
Sbjct: 152 LGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG-RLMTLYLF 209
Query: 225 NNSLRSEIPSG-LKNFDQLKQFDISSNNFV 253
N+L + +P+ L L+ ++ N +V
Sbjct: 210 ANNLSA-LPTEALAPLRALQYLRLNDNPWV 238
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 22/241 (9%), Positives = 57/241 (23%), Gaps = 47/241 (19%)
Query: 389 RRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEE 448
R + G ++ + A + + + + T+ S R L E
Sbjct: 17 REEELIGYCREEALKEPAAMVEAVTAT---VWPQNAETTVDSLLSQGE--RKLKLVE--- 68
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKL 504
+ G + ++ + ++K + + L + ++L
Sbjct: 69 ---------PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARL 119
Query: 505 RHRHLVSILGHC-------ILTYQDHPN-----------TGSTVFLVLEHISNGSLRDYL 546
+ Q P + L++ S L
Sbjct: 120 LGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLF 178
Query: 547 TDWKKKDMLKWP----QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ + + + R L + G+ + +N+ + L
Sbjct: 179 STLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLML 235
Query: 603 S 603
Sbjct: 236 G 236
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 458 LIGEGSQGQLYKGF--LTDGSRVSVKCLKLKQRHLPQSLMQH-VELLSKLRHRHLVSILG 514
I G G +Y +G V +K L Q++ + L+++ H +V I
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF- 145
Query: 515 HCILTYQDHPNTG--STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
+ +H + ++V+E++ SL+ L + +A ++ +
Sbjct: 146 ----NFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEILPALS 196
Query: 573 FLHTGVAPGIFGNNLKTENILLDK 596
+LH + G+ N+LK ENI+L +
Sbjct: 197 YLH---SIGLVYNDLKPENIMLTE 217
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 36/182 (19%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRH 508
++++ +IG G+ + + +V++K + L++ L++ ++ +S+ H +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP----QRMAII 564
+VS ++ ++LV++ +S GS+ D + K K +A I
Sbjct: 75 IVSYYT----SFVV----KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 565 IGAT-RGVQFLHTGVAPGIFGNNLKTENILLDKA----LT-----AKLSGYNIPLPSKVR 614
+ G+++LH G ++K NILL + + A L+ +KVR
Sbjct: 127 LREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 615 NT 616
T
Sbjct: 184 KT 185
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 27/110 (24%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTDGS------RVSVKCLK----LKQRHLPQSLMQH 497
F NL +G G+ G++ S +V+VK LK +R ++LM
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER---EALMSE 98
Query: 498 VELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++++L H ++V++LG C P ++L+ E+ G L +YL
Sbjct: 99 LKMMTQLGSHENIVNLLGACT---LSGP-----IYLIFEYCCYGDLLNYL 140
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 34/180 (18%)
Query: 119 ILTKLSNLKVLSL---------VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
+ L+ + V+ L + G + + L + I+ I IP +
Sbjct: 140 VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK-------LSYIRIADTNI-TTIPQGL- 190
Query: 170 SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN---DFGPK-FPSLSKNIVSVIL 223
+L + L N + V L+ L L +L L N + ++ + L
Sbjct: 191 -PPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP-HLRELHL 247
Query: 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLF-----SLPSILYLNLAGNQLS 277
NN L +P GL + ++ + +NN F S ++L N +
Sbjct: 248 NNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 44/217 (20%), Positives = 75/217 (34%), Gaps = 43/217 (19%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
L L+ L L L LP K+ +L+ L + N I ++ + L + +
Sbjct: 96 FAPLVKLERLYLSKNQL-KELPEKM--PKTLQELRVHENEIT-KVRKSVFNGLNQMIVVE 151
Query: 179 LADNLLNGSV---------PDLQRLVL---------------LEELNLGGNDF----GPK 210
L N L S L + + L EL+L GN
Sbjct: 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAAS 211
Query: 211 FPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYL 269
L N+ + L NS+ + + +G L N L++ +++N V + L I +
Sbjct: 212 LKGL-NNLAKLGLSFNSISA-VDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVV 268
Query: 270 NLAGNQLSE------ALPVNISCSAKLNFVEISHNLL 300
L N +S P + A + V + N +
Sbjct: 269 YLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 305
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 4e-07
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 16/138 (11%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGN- 205
L V+ S + ++P ++ + + L +N + + D + L L L L N
Sbjct: 32 HLRVVQCSDLGL-EKVPKDLPP--DTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNK 87
Query: 206 --DFGPK-FPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFS 262
P F L + + L N L E+P + L++ + N ++ +F+
Sbjct: 88 ISKISPGAFAPL-VKLERLYLSKNQL-KELPEKM--PKTLQELRVHENEITK-VRKSVFN 142
Query: 263 -LPSILYLNLAGNQLSEA 279
L ++ + L N L +
Sbjct: 143 GLNQMIVVELGTNPLKSS 160
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 24/153 (15%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+G G+ G++ G G +V+VK L K++ + + + ++ L RH H++ +
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL- 81
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATRG 570
YQ +T S +F+V+E++S G L DY+ K L + + I+
Sbjct: 82 ------YQVI-STPSDIFMVMEYVSGGELFDYIC---KNGRLDEKESRRLFQQILSG--- 128
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
V + H + +LK EN+LLD + AK++
Sbjct: 129 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIA 158
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 21/214 (9%)
Query: 388 IRRSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIE 447
+ K +G D + + A ++ + + + + I PP F +
Sbjct: 21 FQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPP-APFDHRIVT 79
Query: 448 EATNNF------DPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVEL 500
T ++G G GQ++K G +++ K +K + + + + +
Sbjct: 80 AKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISV 139
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
+++L H +L+ + ++ + + LV+E++ G L D + D + L
Sbjct: 140 MNQLDHANLIQLYD----AFESKND----IVLVMEYVDGGELFDRIID--ESYNLTELDT 189
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
+ + G++ +H I +LK ENIL
Sbjct: 190 ILFMKQICEGIRHMHQM---YILHLDLKPENILC 220
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 3e-07
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRH 508
+ +GEG+ G +YK + G V++K ++L +P + ++ + LL +L H +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+VS+ ++ + + LV E + L+ L + K L+ Q +
Sbjct: 81 IVSL--IDVIH------SERCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLL 129
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
RGV H I +LK +N+L++ KL
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKL 160
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 48/175 (27%)
Query: 457 NLIGEGSQGQLYKGFLTD------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-R 505
+G G+ G++ + +V+VK LK ++ ++LM ++++S L +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK---EALMSELKIMSHLGQ 108
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-----------TDWKKKDM 554
H ++V++LG C P V ++ E+ G L ++L
Sbjct: 109 HENIVNLLGACT---HGGP-----VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 555 LKWPQRMAIIIGATRGVQFL------HTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ +G+ FL H VA N+LL AK+
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVA---------ARNVLLTNGHVAKIG 206
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 24/101 (23%)
Query: 459 IGEGSQGQLYKGFLTD--------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-R 505
+GEG+ GQ+ ++V+VK LK K L+ +E++ + +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL---SDLISEMEMMKMIGK 133
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
H++++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 134 HKNIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 166
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 29/205 (14%), Positives = 77/205 (37%), Gaps = 14/205 (6%)
Query: 391 SKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEAT 450
+ D+ +R + +G + I + + +
Sbjct: 97 TAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVL 156
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+++D +G G+ G +++ G+ + K + +++ + ++ +S LRH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V++ ++D + ++ E +S G L + + D + + + + + + +
Sbjct: 217 VNLHD----AFEDDNE----MVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCK 266
Query: 570 GVQFLHTGVAPGIFGNNLKTENILL 594
G+ +H +LK ENI+
Sbjct: 267 GLCHMHEN---NYVHLDLKPENIMF 288
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 30/158 (18%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQ---HVELLSKLRHRHLVSI 512
L+GEGS G++ + R +VK L K K R +P ++LL +LRH++++ +
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGS--LRDYLTDWKKKDMLKWPQRMAI-----II 565
+L + +++V+E+ G + D + +K ++P A +I
Sbjct: 72 --VDVLYNE----EKQKMYMVMEYCVCGMQEMLDSVP---EK---RFPVCQAHGYFCQLI 119
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+++LH + GI ++K N+LL T K+S
Sbjct: 120 D---GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKIS 151
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 25/166 (15%), Positives = 59/166 (35%), Gaps = 18/166 (10%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGN 205
++ + +S + ++ +L + I + + + L+ L LL+ L +
Sbjct: 56 NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT 115
Query: 206 DF-----GPKFPSLSKNIVSVILRNNSLRSEIP----SGLKNFDQLKQFDISSNNFVGPI 256
K S + I N + S IP GL N + + +N F +
Sbjct: 116 GLKMFPDLTKVYSTDIFFILEITDNPYMTS-IPVNAFQGLCN--ETLTLKLYNNGFTS-V 171
Query: 257 QSFLFSLPSILYLNLAGNQLSEALPVNI--SCSAKLNFVEISHNLL 300
Q + F+ + + L N+ + + + + +++S +
Sbjct: 172 QGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 211 FPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILY 268
PSL + ++ L LR+ IPS N + + +S + + ++S F L + +
Sbjct: 26 IPSLPPSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTH 84
Query: 269 LNLAGNQLSEALPVNI-SCSAKLNFVEISHNLLIGKLPSCIGSNSLNR 315
+ + + + + L F+ I + + P S +
Sbjct: 85 IEIRNTRNLTYIDPDALKELPLLKFLGIFNT-GLKMFPDLTKVYSTDI 131
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-07
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 459 IGEGSQGQLYKGFLTD--------GSRVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRH 508
+GEG+ GQ+ V+VK LK L+ +E++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 103 IINLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 458 LIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQRHLPQSLM------QHVELLSKLRHRH 508
++G G +++ D V+VK L+ P + Q+ + L H
Sbjct: 19 ILGFGGMSEVHLA--RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA---AALNHPA 73
Query: 509 LVSILGHCILTY---QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
+V++ Y + G ++V+E++ +LRD + + + + + +I
Sbjct: 74 IVAV-------YDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIA 123
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
A + + F H GI ++K NI++ K+
Sbjct: 124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKV 157
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 459 IGEGSQGQLYKGFLTD--------GSRVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRH 508
+GEG GQ+ V+VK LK L+ +E++ + +H++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 149 IINLLGACT---QDGP-----LYVIVEYASKGNLREYL 178
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 4e-07
Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 450 TNNFDPTNLIGEG--SQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL 504
++ +IG+G + G V+V+ + L+ + L + +
Sbjct: 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V T+ + +++V ++ GS +D L D + I+
Sbjct: 84 NHPNIVPYRA----TFI----ADNELWVVTSFMAYGSAKD-LICTHFMDGMNELAIAYIL 134
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604
G + + ++H G ++K +IL+ LSG
Sbjct: 135 QGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 171
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 4e-07
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 26/178 (14%)
Query: 425 PQTMRSAAIGLP-PFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKC 482
P +M P F S + + ++G+GS G++ G +VK
Sbjct: 2 PGSMMDHLHATPGMFVQHSTAIFSD---RYKGQRVLGKGSFGEVILCKDKITGQECAVKV 58
Query: 483 L---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISN 539
+ ++KQ+ +SL++ V+LL +L H +++ + ++D +LV E +
Sbjct: 59 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE----FFEDKGY----FYLVGEVYTG 110
Query: 540 GSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
G L D + +K ++ + A II G+ ++H I +LK EN+LL+
Sbjct: 111 GELFDEII--SRK---RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLE 160
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-07
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 459 IGEGSQGQLYKGFLTD------GSRVSVKCLK----LKQRHLPQSLMQHVELLSKL-RHR 507
+G G+ G++ + V+VK LK L +R ++LM +++LS L H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMSELKVLSYLGNHM 87
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++V++LG C P ++ E+ G L ++L
Sbjct: 88 NIVNLLGACT---IGGP-----TLVITEYCCYGDLLNFL 118
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 50.2 bits (121), Expect = 7e-07
Identities = 30/154 (19%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRH 508
+ IGEG+ G +YK G ++K ++L++ +P + ++ + +L +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V + + ++ T + LV EH+ L+ L + L+ + ++
Sbjct: 62 IVKL--YDVIH------TKKRLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G+ + H + +LK +N+L+++ K+
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKI 141
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 7e-07
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 112 NIDRFFTILTKLSNLKVLSL--VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
N + + + NL+ LSL V L LP + L+ L +S N I+G + M
Sbjct: 37 NDGKIEGLTAEFVNLEFLSLINVGLISVSNLP----KLPKLKKLELSENRIFGGLDMLAE 92
Query: 170 SLKNLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGN 205
L NL + L+ N L ++ L++L L+ L+L
Sbjct: 93 KLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+GEG+ G++ V+VK + + P+++ + + + L H ++V
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY-- 71
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI-----IIGATRG 570
H G+ +L LE+ S G L D + M P+ A ++
Sbjct: 72 ------GHRREGNIQYLFLEYCSGGELFDRIE--PDIGM---PEPDAQRFFHQLMAG--- 117
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
V +LH GI ++K EN+LLD+ K+S
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKIS 147
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRH 506
+++ F +G G+ +YKG T G V++K +KL P + ++ + L+ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM---LKWPQRMAI 563
++V + + ++ T + + LV E + N L+ Y+ + L+
Sbjct: 63 ENIVRL--YDVIH------TENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ F H I +LK +N+L++K KL
Sbjct: 114 QWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKL 149
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 9e-07
Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 35/191 (18%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCL-----------------KLKQRHLPQS 493
N++ + +G ++ ++K K+ +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEKD-NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD---WK 550
+++++ +++ + ++ G V+++ E++ N S+ +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGII--------TNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 551 KKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYN 606
K P ++ II ++H I ++K NIL+DK KLS G +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 607 IPLPSKVRNTL 617
+ K
Sbjct: 200 EYMVDKKIKGS 210
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 9e-07
Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 32/159 (20%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQH---------VELLSKLRHRH 508
+G G+ G ++ V VK +K K++ L ++ + +LS++ H +
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLE-HISNGSLRDYLTDWKKKDMLKWPQRMAI---I 564
++ +L D LV+E H S L ++ + L P I +
Sbjct: 91 IIKVL--------DIFENQGFFQLVMEKHGSGLDLFAFID---RHPRLDEPLASYIFRQL 139
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ A V +L I ++K ENI++ + T KL
Sbjct: 140 VSA---VGYLRLK---DIIHRDIKDENIVIAEDFTIKLI 172
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-06
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
NF IGEG+ G +YK G V++K ++L +P + ++ + LL +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 63 NIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQL 112
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ F H+ + +LK +N+L++ KL
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKL 144
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 112 NIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKIN---RFWSLEVLNISSNFIYGEIPMEI 168
N + + + L+ LS +++GL + I + L+ L +S N + G + +
Sbjct: 30 NEGKLEGLTDEFEELEFLSTINVGL-----TSIANLPKLNKLKKLELSDNRVSGGLEVLA 84
Query: 169 TSLKNLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGN 205
NL + L+ N + ++ L++L L+ L+L
Sbjct: 85 EKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 1e-04
Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 25/131 (19%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
L + N SN ++ + L+ + + L S+ +L +L L++L L
Sbjct: 21 ELVLDNSRSNEG--KLEGLTDEFEELEFLSTINVGLT-SIANLPKLNKLKKLEL------ 71
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSIL 267
+N + + + L ++S N L L ++
Sbjct: 72 ---------------SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLK 116
Query: 268 YLNLAGNQLSE 278
L+L +++
Sbjct: 117 SLDLFNCEVTN 127
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+GEG+ G++ V+VK + + P+++ + + + L H ++V
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY-- 71
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI-----IIGATRG 570
H G+ +L LE+ S G L D + M P+ A ++
Sbjct: 72 ------GHRREGNIQYLFLEYCSGGELFDRIE--PDIGM---PEPDAQRFFHQLMAG--- 117
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
V +LH GI ++K EN+LLD+ K+S
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKIS 147
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 32/143 (22%)
Query: 140 LPSKINRFWSLEVLNISSNFIYGEIPME-ITSLKNLKSIVLADNLLNGSVPDLQRLV-LL 197
+ + ++ + + L +S+N I +I ++ ++NL+ + L NL+ + +L + L
Sbjct: 40 MDATLSTLKACKHLALSTNNI-EKI--SSLSGMENLRILSLGRNLIK-KIENLDAVADTL 95
Query: 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257
EEL + N I S+ SG++ L+ + SNN +
Sbjct: 96 EELWISYN-----------QIASL------------SGIEKLVNLRVLYM-SNNKITNWG 131
Query: 258 SF--LFSLPSILYLNLAGNQLSE 278
L +L + L LAGN L
Sbjct: 132 EIDKLAALDKLEDLLLAGNPLYN 154
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 120 LTKLSNLKVLSLVS--LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
L+ + NL++LSL + L + + +LE L IS N I I L NL+ +
Sbjct: 66 LSGMENLRILSLGRNLIKKIENLDAVAD---TLEELWISYNQI--ASLSGIEKLVNLRVL 120
Query: 178 VLADNLLN--GSVPDLQRLVLLEELNLGGN 205
+++N + G + L L LE+L L GN
Sbjct: 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGN 150
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 23/172 (13%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182
+++ ++ L LP + +L++S N +Y + L + L
Sbjct: 9 VASHLEVNCDKRNL-TALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 183 LLNGSVPDLQRLVLLEELNLGGNDFG---PKFPSLSKNIVSVILRNNSLRSEIPSGLKNF 239
L + L +L L+L N +L + + + N L S +P G
Sbjct: 66 ELT-KLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLP-ALTVLDVSFNRLTS-LPLGA--L 120
Query: 240 D---QLKQFDISSNNFVGPIQSF---LF-SLPSILYLNLAGNQLSEALPVNI 284
+L++ + N +++ L P + L+LA N L+ LP +
Sbjct: 121 RGLGELQELYLKGNE----LKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL 167
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
++ IGEG+ G ++K V++K ++L +P S ++ + LL +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + H +L + + LV E L+ Y L + +
Sbjct: 62 NIVRL--HDVLH------SDKKLTLVFEFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQL 110
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ F H+ + +LK +N+L+++ KL
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKL 142
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 41/234 (17%), Positives = 76/234 (32%), Gaps = 22/234 (9%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKI-NRFWSLEVLNISSNFIYGEIPMEI-TSLKNLK 175
T ++L +L+ L + + + SL +L + N ++ L NL+
Sbjct: 48 TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF-LQLETGAFNGLANLE 106
Query: 176 SIVLADNLLNGS-VPD--LQRLVLLEELNLGGN-----DFGPKFPSLSKNIVSVILRNNS 227
+ L L+G+ + + L LE L L N F ++ + L N
Sbjct: 107 VLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMR-RFHVLDLTFNK 165
Query: 228 LRSEIPSGLKNF----------DQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277
++S L NF + D++ F SI L+L+GN
Sbjct: 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK 225
Query: 278 EALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKY 331
E++ + ++ + S G + T+ L K
Sbjct: 226 ESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKT 279
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 30/215 (13%), Positives = 70/215 (32%), Gaps = 35/215 (16%)
Query: 118 TILTKLSNLKVLSL-------VSLGLWGPLPSK---INRFWSLEVLNISSNFIYGEIPME 167
+ + VL L + K + R S+ + +++ ++ E
Sbjct: 148 SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGN 207
Query: 168 ITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI--- 222
++ ++ L+ N S+ + + +L ++ S
Sbjct: 208 PFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNF 267
Query: 223 --------------LRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVGPIQSFLF-SLPSI 266
L + + + + + +F L+Q ++ N I F L +
Sbjct: 268 TFKGLEASGVKTCDLSKSKIFA-LLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHL 325
Query: 267 LYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLL 300
L LNL+ N L + + KL +++S+N +
Sbjct: 326 LKLNLSQNFLGS-IDSRMFENLDKLEVLDLSYNHI 359
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 8e-04
Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 36/188 (19%)
Query: 95 PTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154
F A + + + + + + + + G S ++ +
Sbjct: 228 MAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEAS------GVKTCD 281
Query: 155 ISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKF 211
+S + I + + + +L+ + LA N +N + D L L +LNL N
Sbjct: 282 LSKSKI-FALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFL---- 335
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGL-KNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYL 269
I S + +N D+L+ D+S N+ + F LP++ L
Sbjct: 336 ------------------GSIDSRMFENLDKLEVLDLSYNHI-RALGDQSFLGLPNLKEL 376
Query: 270 NLAGNQLS 277
L NQL
Sbjct: 377 ALDTNQLK 384
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 28/154 (18%)
Query: 458 LIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQRHLPQSLM------QHVELLSKLRHRH 508
+G G +Y D +V++K + + R ++L + S+L H++
Sbjct: 18 KLGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS---SQLSHQN 72
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+VS++ D +LV+E+I +L +Y+ + L +
Sbjct: 73 IVSMI--------DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQIL 121
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G++ H I ++K +NIL+D T K+
Sbjct: 122 DGIKHAH---DMRIVHRDIKPQNILIDSNKTLKI 152
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 4e-06
Identities = 40/265 (15%), Positives = 95/265 (35%), Gaps = 23/265 (8%)
Query: 53 WTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPK-------PTFGKFSASQQ 105
+ + L + + +T+ +++ S K +
Sbjct: 227 NIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNL 286
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP 165
+++ + + F T L +L + + + + + F + + +S +
Sbjct: 287 TITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHM 346
Query: 166 MEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFG--PKFPSLSKNIVSVI 222
+ S + + N+ SV L L+ L L N K ++KN+ S+
Sbjct: 347 VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406
Query: 223 LRNNSLRSEIPSGLKNF-----DQLKQFDISSNNFVGPIQSFLF-SLPSIL-YLNLAGNQ 275
+ SL S + S + + + ++SSN + +F LP + L+L N+
Sbjct: 407 TLDVSLNS-LNSHAYDRTCAWAESILVLNLSSNM----LTGSVFRCLPPKVKVLDLHNNR 461
Query: 276 LSEALPVNISCSAKLNFVEISHNLL 300
+ ++P +++ L + ++ N L
Sbjct: 462 IM-SIPKDVTHLQALQELNVASNQL 485
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 110 NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT 169
+ N + ++ VL+L S L G + + ++VL++ +N I IP ++T
Sbjct: 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPP--KVKVLDLHNNRI-MSIPKDVT 470
Query: 170 SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDF 207
L+ L+ + +A N L SVPD RL L+ + L N +
Sbjct: 471 HLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 24/141 (17%), Positives = 58/141 (41%), Gaps = 16/141 (11%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G G+ G ++ + G +K + K + + + + +E+L L H +++ I
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE-- 87
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFL 574
++D+ N +++V+E G L + + + + ++ + +
Sbjct: 88 --VFEDYHN----MYIVMETCEGGELLERIVS-AQARGKALSEGYVAELMKQMMNALAYF 140
Query: 575 HTGVAPGIFGNNLKTENILLD 595
H + + +LK ENIL
Sbjct: 141 H---SQHVVHKDLKPENILFQ 158
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSIL 513
+GEGS G++ +V++K + LK+ + + + + L LRH H++ +
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL- 74
Query: 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATRG 570
+ ++T T + + +V+E+ G L DY+ +K + + II A
Sbjct: 75 -YDVIT------TPTDIVMVIEYA-GGELFDYIV---EKKRMTEDEGRRFFQQIICA--- 120
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++ H I +LK EN+LLD L K++
Sbjct: 121 IEYCH---RHKIVHRDLKPENLLLDDNLNVKIA 150
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-06
Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 54/203 (26%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSKLRHRH 508
+F+P +G G G +++ D ++K ++L R L + +M+ V+ L+KL H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 509 LV-------------------------------------------------SILGHCILT 519
+V +
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVA 579
+ +++ ++ +L+D++ + + + I I V+FLH +
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---S 182
Query: 580 PGIFGNNLKTENILLDKALTAKL 602
G+ +LK NI K+
Sbjct: 183 KGLMHRDLKPSNIFFTMDDVVKV 205
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 27/191 (14%)
Query: 411 VRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKG 470
+ + R F + E + +G G+ G++
Sbjct: 1 MHHHHHHS-SGRENLYFQGDLQATPGMFITSKKGHLSE---MYQRVKKLGSGAYGEVLLC 56
Query: 471 F-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526
++K + + L++ V +L L H +++ + ++D N
Sbjct: 57 RDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVLKLLDHPNIMKLYD----FFEDKRN- 110
Query: 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFG 584
+LV+E G L D + + K+ + A II GV +LH I
Sbjct: 111 ---YYLVMECYKGGELFDEII--HRM---KFNEVDAAVIIKQVLSGVTYLH---KHNIVH 159
Query: 585 NNLKTENILLD 595
+LK EN+LL+
Sbjct: 160 RDLKPENLLLE 170
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 8e-06
Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 22/159 (13%)
Query: 440 GFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHV 498
G + +I + + N IG GS G++ R + K + Q +
Sbjct: 1 GSTKGDINQ---YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 57
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
E++ L H +++ + T++D+ + ++LV+E + G L + + K+ +
Sbjct: 58 EIMKSLDHPNIIRLYE----TFEDNTD----IYLVMELCTGGELFERVV--HKR---VFR 104
Query: 559 QRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
+ A I+ V + H + +LK EN L
Sbjct: 105 ESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFL 140
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 8e-06
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLR 505
++ ++G+GS G++ K +VK + K + ++++ VELL KL
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLD 79
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--I 563
H +++ + +D + ++V E + G L D + K+K ++ + A I
Sbjct: 80 HPNIMKLFE----ILEDSSS----FYIVGELYTGGELFDEII--KRK---RFSEHDAARI 126
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
I G+ ++H I +LK ENILL+
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLE 155
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 47.3 bits (112), Expect = 9e-06
Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 29/173 (16%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH-RHLVSI 512
++G+ + G V + + + + + V L LR ++
Sbjct: 80 VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139
Query: 513 LGHC-------ILTYQDHPNTGS-----------TVFLVLE--HISNGSLRDYLTDWKKK 552
H ++ + F + + + + L
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199
Query: 553 D-MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604
L R+ + + R + LH G+ L+ +I+LD+ L+G
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTG 249
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 45/213 (21%)
Query: 149 SLEVLNISSNFIYGEIPME--ITSLKNLKSIVLADNLLN-------GSVPDLQRLVLLEE 199
++ L+I + + + L+ + + L D L S L+ L E
Sbjct: 4 DIQSLDIQCEEL-SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSA--LRVNPALAE 60
Query: 200 LNLGGNDFGPK--------FPSLSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDI 247
LNL N+ G + S I + L+N L + S L+ L++ +
Sbjct: 61 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHL 120
Query: 248 SSNNFVGP-----IQSFLFSLPSILYLNLAGNQ--------LSEALPVNISCSAKLNFVE 294
S N + L + L L L+ L +
Sbjct: 121 SDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPD----FKELT 176
Query: 295 ISHNLLIGK----LPSCIGSNSLNRTVVSTWNC 323
+S+N + L + + + +C
Sbjct: 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESC 209
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCLK---LKQRHLPQSLMQHVELLSKLRH 506
+ F ++G G G+++ + ++ + K L LK+R Q M ++L+K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
R +VS+ ++ T + + LV+ ++ G +R ++ + + + + + AI
Sbjct: 245 RFIVSL--AY--AFE----TKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYT 295
Query: 567 A--TRGVQFLHTGVAPGIFGNNLKTENILLDK 596
A G++ LH I +LK EN+LLD
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDD 324
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRH 508
+ + +GEG+ +YKG + V++K ++L+ P + ++ V LL L+H +
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V++ H I+ T ++ LV E++ L+ YL D +++ +
Sbjct: 62 IVTL--HDIIH------TEKSLTLVFEYLDK-DLKQYLDD--CGNIINMHNVKLFLFQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
RG+ + H + +LK +N+L+++ KL
Sbjct: 111 RGLAYCH---RQKVLHRDLKPQNLLINERGELKL 141
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 17/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHR 507
++ IGEGS G ++K G V++K + + + ++ + +L +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+LV++L + + LV E+ + ++ L + + +I
Sbjct: 63 NLVNLL--------EVFRRKRRLHLVFEYCDH-TVLHELDR--YQRGVPEHLVKSITWQT 111
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ V F H ++K ENIL+ K KL
Sbjct: 112 LQAVNFCHKH---NCIHRDVKPENILITKHSVIKL 143
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 34/172 (19%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNIS-SNFIYGEIPMEI-TSLKNLKSIVLA 180
+S VL ++ ++ LP L + I +N + I E +L NL+ ++++
Sbjct: 61 ISQNDVLEVIEADVFSNLPK-------LHEIRIEKANNLL-YINPEAFQNLPNLQYLLIS 112
Query: 181 DNLLNGSVPDL--QRLVLLEELNLGGNDF-----GPKFPSLSKNIVSVILRNNSLRSEIP 233
+ + +PD+ + L++ N F LS V + L N ++ I
Sbjct: 113 NTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IH 170
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI 284
+ N QL + ++S NN + + + +F + L+++ ++ +LP
Sbjct: 171 NSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYG 221
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 22/142 (15%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
IG G+ G V+VK ++ + + +++ + + LRH ++V
Sbjct: 27 DIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR-FKEV 84
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI---IIGATRGVQF 573
ILT + + +++E+ S G L + + + ++ V +
Sbjct: 85 ILT-------PTHLAIIMEYASGGELYERIC---NAGRFSEDEARFFFQQLLSG---VSY 131
Query: 574 LHTGVAPGIFGNNLKTENILLD 595
H + I +LK EN LLD
Sbjct: 132 CH---SMQICHRDLKLENTLLD 150
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 3e-05
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
++ L+GEGS G + K G V++K + + M+ ++LL +LRH
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+LV++L + +LV E + + ++ D L + L + +
Sbjct: 85 NLVNLL--------EVCKKKKRWYLVFEFVDH-TILDDLELFPNG--LDYQVVQKYLFQI 133
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
G+ F H+ I ++K ENIL+ ++ KL
Sbjct: 134 INGIGFCHSH---NIIHRDIKPENILVSQSGVVKL 165
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLR 505
++ ++G+GS G++ K +VK + K + ++++ VELL KL
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT-STILREVELLKKLD 79
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--I 563
H +++ + +D + ++V E + G L D + K+K ++ + A I
Sbjct: 80 HPNIMKLFE----ILEDSSS----FYIVGELYTGGELFDEII--KRK---RFSEHDAARI 126
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
I G+ ++H I +LK ENILL+
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLE 155
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G+ G +++ G K + ++ + ++++L H L+++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD--- 115
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR----GVQF 573
++D + L+LE +S G L D + + K + I R G++
Sbjct: 116 -AFEDKYE----MVLILEFLSGGELFDRIAA----EDYKMSEAEVINY--MRQACEGLKH 164
Query: 574 LHTGVAPGIFGNNLKTENILL 594
+H I ++K ENI+
Sbjct: 165 MHEH---SIVHLDIKPENIMC 182
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
+ + +GEG+ G++YK V++K ++L+ +P + ++ V LL +L+HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+++ + ++ + L+ E+ N L+ Y+ M + +
Sbjct: 94 NIIEL--KSVIH------HNHRLHLIFEYAEN-DLKKYMDKNPDVSM---RVIKSFLYQL 141
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
GV F H+ +LK +N+LL + ++
Sbjct: 142 INGVNFCHS---RRCLHRDLKPQNLLLSVSDASE 172
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 35/196 (17%)
Query: 416 KPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTD 474
S R + AI + +I E ++ +G G+ G++
Sbjct: 4 HHHHSSGRENLYFQGIAINPGMYVRKKEGKIGE---SYFKVRKLGSGAYGEVLLCKEKNG 60
Query: 475 GSRVSVKCLKLKQ-------------RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521
S ++K +K Q + + + LL L H +++ + ++
Sbjct: 61 HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD----VFE 116
Query: 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT--RGVQFLHTGVA 579
D +LV E G L + + + K+ + A I G+ +LH
Sbjct: 117 DKKY----FYLVTEFYEGGELFEQII--NRH---KFDECDAANIMKQILSGICYLH---K 164
Query: 580 PGIFGNNLKTENILLD 595
I ++K ENILL+
Sbjct: 165 HNIVHRDIKPENILLE 180
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 21/135 (15%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 152 VLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQR-LVLLEELNLGGNDFGP- 209
++ +++ I E + T+ + + L + + +L L + ++ N+
Sbjct: 1 MVKLTAELI--EQAAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL 57
Query: 210 -KFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF-----LFSL 263
FP L + + ++++ NN + + L + +++N+ + L SL
Sbjct: 58 DGFPLL-RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNS----LVELGDLDPLASL 112
Query: 264 PSILYLNLAGNQLSE 278
S+ YL + N ++
Sbjct: 113 KSLTYLCILRNPVTN 127
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 15/107 (14%)
Query: 106 SLSANFNIDRFFTILTKLSNLKVLSL-----VSLGLWGPLPSKINRFWSLEVLNISSNFI 160
L I + L + L + L L+ L +++N I
Sbjct: 25 DLRGY-KIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRR-------LKTLLVNNNRI 76
Query: 161 YGEIPMEITSLKNLKSIVLADNLLN--GSVPDLQRLVLLEELNLGGN 205
+L +L ++L +N L G + L L L L + N
Sbjct: 77 CRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLS 502
AT+ ++P IG G+ G +YK G V++K +++ LP S ++ V LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 503 KLR---HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L H ++V + + + V LV EH+ LR YL D L
Sbjct: 67 RLEAFEHPNVVRL--MDVCA-TSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAET 121
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
++ RG+ FLH I +LK ENIL+ T KL
Sbjct: 122 IKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 44/230 (19%), Positives = 88/230 (38%), Gaps = 37/230 (16%)
Query: 390 RSKTTGAGDDKYERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEA 449
R + + + + K + + + ++G P +E
Sbjct: 34 REQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMG-PEDELPDWAAAKEF 92
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQH--------VEL 500
+DP ++IG G + + G +VK +++ L ++ +
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 501 LSKLR-HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------KD 553
L ++ H H+++++ +Y+ +FLV + + G L DYLT+ +
Sbjct: 153 LRQVAGHPHIITLID----SYESSSF----MFLVFDLMRKGELFDYLTEKVALSEKETRS 204
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++ ++ A V FLH A I +LK ENILLD + +LS
Sbjct: 205 IMR------SLLEA---VSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 26/154 (16%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKC-----LKLKQRHLPQSLMQHVELLSKLRH 506
++ +IG+G + + G + +VK + L + + L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA---- 562
H+V +L TY +++V E + L + + + + +A
Sbjct: 86 PHIVELLE----TYSSDGM----LYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYM 136
Query: 563 -IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
I+ A +++ H I ++K +LL
Sbjct: 137 RQILEA---LRYCH---DNNIIHRDVKPHCVLLA 164
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 32/154 (20%), Positives = 63/154 (40%), Gaps = 34/154 (22%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQ---HVELLSKLRHR--H 508
L+G G G +Y G ++D V++K + ++ + + V LL K+
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAI---- 563
++ +L D + L+LE L D++T ++ + + +A
Sbjct: 110 VIRLL--------DWFERPDSFVLILERPEPVQDLFDFIT--ERGAL---QEELARSFFW 156
Query: 564 -IIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
++ A V+ H G+ ++K ENIL+D
Sbjct: 157 QVLEA---VRHCH---NCGVLHRDIKDENILIDL 184
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 37/184 (20%)
Query: 432 AIGLPPFRGFSLEEIEEATNNFDPTNL---------IGEGSQGQLYKGF-LTDGSRVSVK 481
A+ L + F ++ + P L +G G+ G++ F +V+++
Sbjct: 107 ALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166
Query: 482 CLK--------LKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533
+ ++ ++ +E+L KL H ++ I + ++V
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKN----FFDA-----EDYYIV 217
Query: 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQFLHTGVAPGIFGNNLKTEN 591
LE + G L D + K + + VQ+LH GI +LK EN
Sbjct: 218 LELMEGGELFDKVV--GNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPEN 269
Query: 592 ILLD 595
+LL
Sbjct: 270 VLLS 273
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCLK---LKQRHLPQSLMQHVELLSKLRH 506
N F ++G+G G++ + ++ + K L+ +K+R + ++L K+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
R +VS+ Y+ T + LVL ++ G L+ ++ +P+ A+
Sbjct: 244 RFVVSL--AY--AYE----TKDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYA 292
Query: 567 A--TRGVQFLHTGVAPGIFGNNLKTENILLD 595
A G++ LH I +LK ENILLD
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLD 320
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGH 515
++G G G++ + F G + ++K L + Q V+ + H+V IL
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-----ARQEVDHHWQASGGPHIVCILD- 89
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--IIIGATRGVQF 573
Y++ + + +++E + G L + ++ + +R A I+ +QF
Sbjct: 90 ---VYENMHHGKRCLLIIMECMEGGELFSRIQ---ERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 574 LHTGVAPGIFGNNLKTENILL 594
LH + I ++K EN+L
Sbjct: 144 LH---SHNIAHRDVKPENLLY 161
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 20/107 (18%)
Query: 453 FDPTNL-----IGEGSQGQLYKGFLTD------GSRVSVKCLKLK-QRHLPQSLMQHVEL 500
F L +G G+ GQ+ + V+VK LK ++LM +++
Sbjct: 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 78
Query: 501 LSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
L + H ++V++LG C T P + +++E G+L YL
Sbjct: 79 LIHIGHHLNVVNLLGAC--TKPGGP-----LMVIVEFCKFGNLSTYL 118
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 6e-05
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 149 SLEVLNISSNFIYGEIPMEIT--SLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGG 204
+L++S N + + E T L NL S++L+ N LN + + L L+L
Sbjct: 40 YTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSS 97
Query: 205 N---DFGPK-FPSLSKNIVSVILRNNSLRSEIPSGLKNFD---QLKQFDISSNNFVG-PI 256
N F L + ++L NN + + F+ QL++ +S N P+
Sbjct: 98 NHLHTLDEFLFSDLQ-ALEVLLLYNNHIVV-VDRNA--FEDMAQLQKLYLSQNQISRFPV 153
Query: 257 QSF--LFSLPSILYLNLAGNQLS 277
+ LP ++ L+L+ N+L
Sbjct: 154 ELIKDGNKLPKLMLLDLSSNKLK 176
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---------QSLMQHVE 499
N++P ++G G + + +VK + + ++ ++ V+
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 500 LLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------K 552
+L K+ H +++ + TY+ + FLV + + G L DYLT+ +
Sbjct: 76 ILRKVSGHPNIIQLKD----TYETNTF----FFLVFDLMKKGELFDYLTEKVTLSEKETR 127
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++ ++ + LH I +LK ENILLD + KL+
Sbjct: 128 KIMR------ALLEV---ICALH---KLNIVHRDLKPENILLDDDMNIKLT 166
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 7e-05
Identities = 31/170 (18%), Positives = 48/170 (28%), Gaps = 46/170 (27%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208
LE+ S F G + EI + L+ ++ A L + L + L N FG
Sbjct: 61 DLEIAEFSDIFT-GRVKDEI--PEALRLLLQA----------LLKCPKLHTVRLSDNAFG 107
Query: 209 PK-------FPSLSKNIVSVILRNNSLRSE-------------IPSGLKNFDQLKQFDIS 248
P F S + + L NN L + + KN L+
Sbjct: 108 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG 167
Query: 249 SNNF----VGPIQSFLFSLPSILYLNLAGNQ---------LSEALPVNIS 285
N + S + + + N L E L
Sbjct: 168 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQE 217
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 24/140 (17%), Positives = 44/140 (31%), Gaps = 29/140 (20%)
Query: 166 MEITSLKNLKSIVLADNLLNGS-----VPDLQRLVLLEELNLGGNDFGPK-----FPSLS 215
M S++ L + + L ++E+ L GN G + +++
Sbjct: 1 MARFSIEGKS---LKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIA 57
Query: 216 KN--IVSVILRNNS---LRSEIPSG-------LKNFDQLKQFDISSNNF----VGPIQSF 259
+ + ++ EIP L +L +S N F P+ F
Sbjct: 58 SKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDF 117
Query: 260 LFSLPSILYLNLAGNQLSEA 279
L + +L L N L
Sbjct: 118 LSKHTPLEHLYLHNNGLGPQ 137
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 51/171 (29%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQH-------VELLSKLRHRHL 509
L+G+G G ++ G LTD +V++K + + R L S + V LL K+
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIP-RNRVLGWSPLSDSVTCPLEVALLWKVGAGG- 95
Query: 510 VSILGHCILTYQDHPN---------TGSTVFLVLEHISNGS-LRDYLTDWKKKDMLKWPQ 559
HP T LVLE L DY+T +K + +
Sbjct: 96 ------------GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT--EKGPL---GE 138
Query: 560 RMA------IIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLS 603
+ ++ +Q H+ G+ ++K ENIL+D + AKL
Sbjct: 139 GPSRCFFGQVV----AAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI 182
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 30/153 (19%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGND 206
S + L++S N + S L+ + L+ + ++ D Q L L L L GN
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN- 86
Query: 207 FGPKFPSLSKNI-------VSVILRNNSLRSEIPSGLKNFD---QLKQFDISSNNFVGPI 256
SL+ ++ +L S + + LK+ +++ N I
Sbjct: 87 ---PIQSLALGAFSGLSSLQKLVAVETNLAS-LENFP--IGHLKTLKELNVAHNL----I 136
Query: 257 QSF----LFS-LPSILYLNLAGNQLSEALPVNI 284
QSF FS L ++ +L+L+ N++ ++
Sbjct: 137 QSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTD 168
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKI-NRFWSLEVLNISSNFIYGEIPMEI-TSLKNLKSIV 178
L+VL L + + L L ++ N I + + + L +L+ +V
Sbjct: 49 FSFPELQVLDLSRCEI-QTIEDGAYQSLSHLSTLILTGNPI-QSLALGAFSGLSSLQKLV 106
Query: 179 LADNLLNGSVPD--LQRLVLLEELNLGGNDF----GPK-FPSLSKNIVSVILRNNSLRSE 231
+ L S+ + + L L+ELN+ N P+ F +L+ N+ + L +N ++S
Sbjct: 107 AVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQS- 163
Query: 232 IPSG-LKNFDQLKQFDIS---SNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287
I L+ Q+ ++S S N + IQ F + L L NQL ++P I
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLK-SVPDGIFDR 222
Query: 288 -AKLNFVEISHN 298
L + + N
Sbjct: 223 LTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 36/168 (21%), Positives = 53/168 (31%), Gaps = 38/168 (22%)
Query: 118 TILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177
+ LS+L+ L V SLE I LK LK +
Sbjct: 94 GAFSGLSSLQKLVAVE-----------TNLASLE-------------NFPIGHLKTLKEL 129
Query: 178 VLADNLLNGSVPD---LQRLVLLEELNLGGN--------DFGPKFPSLSKNIVSVILRNN 226
+A NL+ S L LE L+L N D + +S+ L N
Sbjct: 130 NVAHNLIQ-SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL-RVLHQMPLLNLSLDLSLN 187
Query: 227 SLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
+ I G +LK+ + +N L S+ + L N
Sbjct: 188 PMNF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 8e-05
Identities = 27/174 (15%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHR 507
+ ++ IG+G+ G+++K G +V++K + ++ P + ++ +++L L+H
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V+++ C + +++LV + + L L++ + ++
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQML 133
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS------GYNIPLPSKVRN 615
G+ ++H I ++K N+L+ + KL+ +++ S+
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 8e-05
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 451 NNFDPTNLIGEGSQGQLYKG--FLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLR- 505
++ IGEG+ G+++K G V++K ++++ +P S ++ V +L L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 506 --HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
H ++V + + T + + + LV EH+ L YL D + + +
Sbjct: 71 FEHPNVVRL--FDVCT-VSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVPTETIKDM 125
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ RG+ FLH+ + +LK +NIL+ + KL
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 9e-05
Identities = 28/229 (12%), Positives = 70/229 (30%), Gaps = 31/229 (13%)
Query: 403 RSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLE-EIEEATNNFDPTNLIGE 461
+ +++ + + ++ S ++ + F +E E+ E ++G+
Sbjct: 30 EELFNRIPQANVRTTSEYMQSAADSLVSTSL-WNTGQPFRVESELGERPRTLVRGTVLGQ 88
Query: 462 GSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSL------MQHVELLSKLRH-----RHL 509
+ G V +R ++ + + LL +++ HL
Sbjct: 89 EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL 148
Query: 510 VSILGHCILTYQDHPNTGS-----------TVFLVLE--HISNGSLRDYLTDWKKKD-ML 555
I ++ + F + + + + L L
Sbjct: 149 RFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSL 208
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604
R+ + + R + LH G+ L+ +I+LD+ L+G
Sbjct: 209 VHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTG 254
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 36/164 (21%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--------LKQRHLPQSLMQH 497
+ + + + +G G+ G++ F +V++K + ++ ++
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------ 551
+E+L KL H ++ I + ++VLE + G L D + K+
Sbjct: 66 IEILKKLNHPCIIKIKN----FFDAE-----DYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
K ++ A VQ+LH GI +LK EN+LL
Sbjct: 117 KLYFY------QMLLA---VQYLH---ENGIIHRDLKPENVLLS 148
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 56/334 (16%), Positives = 112/334 (33%), Gaps = 84/334 (25%)
Query: 332 QHPYSFCRKEALAVKPPVNVKSDD----EQSTRV-----DVGLILGIIGGVVGFVVVFGL 382
+H Y + K+ L+V V + D + + ++ I+ V G + +F
Sbjct: 13 EHQYQY--KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT 70
Query: 383 LVLVVIRRSKTTGAGDDKYERSVADKM---------SVRGSPK-PAIDSRRVPQTMRSAA 432
L SK ++ ++ V + + ++ + P++ +R +
Sbjct: 71 L------LSK----QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 433 IGLPPF------RGFSLEEIEEATNNFDPTNLI---GEGSQGQLYKGFLT-DGSR-VSVK 481
F R ++ +A P + G G K ++ D V+
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG---KTWVALDVCLSYKVQ 177
Query: 482 C--------LKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533
C L LK + P+++++ L KL ++ + + DH S + L
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEM---LQKLLYQ-----IDPNWTSRSDHS---SNIKLR 226
Query: 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
+ I LR L ++ L +++ VQ + F + K IL
Sbjct: 227 IHSIQA-ELRRLLKSKPYENCL-------LVL---LNVQ--NAKAWNA-FNLSCK---IL 269
Query: 594 L---DKALTAKLSGYNIPLPSKVRNTLSFHTDRS 624
L K +T LS S ++++ D
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 1e-04
Identities = 53/348 (15%), Positives = 99/348 (28%), Gaps = 125/348 (35%)
Query: 21 LVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTEL 80
L S+ LTP E + L K L+ D LP V T + L
Sbjct: 291 LDHHSMT-LTPDEVKSLL--LKYLDCRP-----QD------LPRE-----VLTTNPRR-L 330
Query: 81 TVIGN--KSSPAHS---PKPTFGKFS----ASQQSLSANFNIDRF--FTILTKLSNL--K 127
++I + A K + +S L F ++ +++
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI 390
Query: 128 VLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG- 186
+LSL +W + M + + + S+V +
Sbjct: 391 LLSL----IWFDVIK--------------------SDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 187 SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQF- 245
S+P + + ++ N +L ++IV IP + D + +
Sbjct: 427 SIPSIYLELKVKLENE---------YALHRSIVD--------HYNIPKTFDSDDLIPPYL 469
Query: 246 DISSNNFVG-----PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
D + +G +L +++L+ F+E
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLD-------------------FRFLE------ 504
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCLSGV-NT-----KYQHPYSFCRKEA 342
K+ R + WN + NT Y+ PY C +
Sbjct: 505 -QKI----------RHDSTAWNASGSILNTLQQLKFYK-PY-ICDNDP 539
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 56/372 (15%), Positives = 110/372 (29%), Gaps = 112/372 (30%)
Query: 292 FVE----ISHNLLIGKLPS-CIGSNSLNRTVVSTWNCLSGVNTKYQHPYSFCRKEALAVK 346
FVE I++ L+ + + + + R + + L N + Y+ R +
Sbjct: 82 FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-KYNVSRLQ----- 135
Query: 347 PPVNVKSDDEQSTRVDVGLIL-GIIGGVVGFVVVFG--LLVLVVIRRSKTTGAGDDKYER 403
P R +++ G++G G + L V K +
Sbjct: 136 -PYLKLRQALLELRPAKNVLIDGVLG--------SGKTWVALDVCL--------SYKVQC 178
Query: 404 SVADK---MSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIG 460
+ K ++++ P LE +++ DP N
Sbjct: 179 KMDFKIFWLNLKNCNSPETV----------------------LEMLQKLLYQIDP-NWTS 215
Query: 461 EGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILG-HC--I 517
K + ++ L LK + L+ +L +++ + C +
Sbjct: 216 RSDHSSNIK-LRIHSIQAELRRL-LKSKPYENCLL----VLLNVQNAKAWNAFNLSCKIL 269
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML-KW----------------PQR 560
LT + T HIS LT + K +L K+ P+R
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329
Query: 561 MAII-----IGATRGVQFLHTGVAPGIFGNNLKTENIL------LDKALTAKLSGY---- 605
++II G + H N K I+ L+ A K+ +
Sbjct: 330 LSIIAESIRDGLATWDNWKHV--------NCDKLTTIIESSLNVLEPAEYRKM--FDRLS 379
Query: 606 ----NIPLPSKV 613
+ +P+ +
Sbjct: 380 VFPPSAHIPTIL 391
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 8e-04
Identities = 50/265 (18%), Positives = 94/265 (35%), Gaps = 85/265 (32%)
Query: 24 VSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVI 83
S+ L P+E R +F +L +P + +P + L ++ + +++ V+
Sbjct: 361 SSLNVLEPAEYRKMF--DRLSVFPP------S-AH---IP-TILLSLIWFDVIKSDVMVV 407
Query: 84 GNKSSPAHSPKPTFGKFS-ASQQSLSANFNI-DRFFTILTKLSNLKVL--SLV------- 132
NK K+S +Q + +I + + KL N L S+V
Sbjct: 408 VNK----------LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 133 SLGLWGPLPSKINRFWSLEVLNISSNFI-YGEIPMEITSLKNLKSIVLADNLLNGSVPDL 191
+ +P +++++ + I + +LK+I + + L
Sbjct: 458 TFDSDDLIPPYLDQYF--------YSHIGH-----------HLKNIEHPERM------TL 492
Query: 192 QRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKN-FDQLKQFD--IS 248
R+V L DF +F L + I R++S + N QLK + I
Sbjct: 493 FRMVFL--------DF--RF--LEQKI-----RHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 249 SNN-----FVGPIQSFLFSLPSILY 268
N+ V I FL + L
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLI 560
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 24/152 (15%)
Query: 458 LIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSLM------QHVELLSKLRHRHLV 510
L+G G G +Y+ T R V++K + P + +L+ H+V
Sbjct: 41 LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTA---GRLQEPHVV 97
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
I + D +++ + I+ L L +++ L P+ +AI+
Sbjct: 98 PI-------H-DFGEIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSA 146
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ H A G ++K ENIL+ A L
Sbjct: 147 LDAAH---AAGATHRDVKPENILVSADDFAYL 175
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
++G G+ +++ G ++KC+K SL + +L K++H ++V++
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED-- 73
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSL------RDYLTDWKKKDMLKWPQRMAIIIGATRG 570
Y+ + +LV++ +S G L R T+ +++ ++ A
Sbjct: 74 --IYEST----THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ------QVLSA--- 118
Query: 571 VQFLHTGVAPGIFGNNLKTENILL 594
V++LH GI +LK EN+L
Sbjct: 119 VKYLH---ENGIVHRDLKPENLLY 139
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 28/147 (19%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 459 IGEGSQGQLYKG---FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGH 515
+G G+ G +YK D ++K +++ + S + + LL +L+H +++S+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALK--QIEGTGISMSACREIALLRELKHPNVISLQK- 85
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM------AIIIGATR 569
L++ D V+L+ ++ + L + + K P ++ +++
Sbjct: 86 VFLSHADR-----KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDK 596
G+ +LH + +LK NIL+
Sbjct: 140 GIHYLHAN---WVLHRDLKPANILVMG 163
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 33/164 (20%), Positives = 68/164 (41%), Gaps = 37/164 (22%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ------RHLPQSLMQHVEL 500
E+ + +IG GS G +++ L + V++K K+ Q R L +M+
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFKNREL--QIMRI--- 88
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK--KDMLKWP 558
++H ++V + + D + + LVLE++ + + K
Sbjct: 89 ---VKHPNVVDLK-AFFYSNGDKKDE-VFLNLVLEYVP--------ETVYRASRHYAKLK 135
Query: 559 QRMAIIIGAT------RGVQFLHTGVAPGIFGNNLKTENILLDK 596
Q M +++ R + ++H+ GI ++K +N+LLD
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDP 176
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 486 KQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY 545
+ R + + Q + +L KL H ++V + +L D PN +++V E ++ G + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKL--VEVL---DDPNE-DHLYMVFELVNQGPVMEV 128
Query: 546 LTDWKKKDML--KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
T + + Q +I G +++LH I ++K N+L+ + K++
Sbjct: 129 PTLKPLSEDQARFYFQD--LIKG----IEYLH---YQKIIHRDIKPSNLLVGEDGHIKIA 179
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 40/189 (21%)
Query: 149 SLEVLNISSNFIYGEIPMEITSL-----KNLKSIVLADNLL-NGSVPDLQRLVL-----L 197
S+ LN+S N + + E+ + N+ S+ L+ N L S +L + + +
Sbjct: 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTI 111
Query: 198 EELNLGGNDFGPK--------FPSLSKNIVSVILRNNSLRSE----IPSGLKNFD-QLKQ 244
L+LG NDF K F +L +I S+ LR N L + + L +
Sbjct: 112 TVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNS 171
Query: 245 FDISSNNF----VGPIQSFLFSLP-SILYLNLAGNQ--------LSEALPVNISCSAKLN 291
++ NN + FL S+P S+ L+L+ N L+ S +
Sbjct: 172 LNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS---SIPNHVV 228
Query: 292 FVEISHNLL 300
+ + N L
Sbjct: 229 SLNLCLNCL 237
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 434 GLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRH 489
G+ PF+ +E+ +D +G G + K + G + K + + +
Sbjct: 1 GMEPFKQQKVED------FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR 54
Query: 490 LP---QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ + + V +L ++ H +++++ Y++ + V L+LE +S G L D+L
Sbjct: 55 RGVSREEIEREVSILRQVLHHNVITLHD----VYENR----TDVVLILELVSGGELFDFL 106
Query: 547 TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + I GV +LHT I +LK ENI+L
Sbjct: 107 AQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIML 148
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 31/152 (20%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-----LPQSLMQHVELLSKL 504
++ + +GEG +YK V++K +KL R + ++ ++ ++LL +L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H +++ + S + LV + + L + D +L A +
Sbjct: 70 SHPNIIGL--LDAFG------HKSNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYM 118
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
+ +G+++LH I +LK N+LLD+
Sbjct: 119 LMTLQGLEYLH---QHWILHRDLKPNNLLLDE 147
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 4e-04
Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 46/194 (23%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQS--------------L 494
T IGEG G++++ D + V++K + ++ L +
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 495 MQHVELLSKL---RHRHLVSILGHCI----------------------LTYQDHPNTGST 529
+ + LLS R + + +
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136
Query: 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKT 589
+F+VLE G + + + +I+ T + + +L
Sbjct: 137 LFIVLEFEFGGI----DLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHW 190
Query: 590 ENILLDKALTAKLS 603
N+LL K KL
Sbjct: 191 GNVLLKKTSLKKLH 204
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 4e-04
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFS-LPSI 266
P N+ + + N + L+ +L+ I + + F P +
Sbjct: 25 HHLPGAE-NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTPRL 82
Query: 267 LYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298
LNL+ N L +L L + +S N
Sbjct: 83 SRLNLSFNALE-SLSWKTVQGLSLQELVLSGN 113
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLP---QSLMQHVE 499
++ + +D +G G + K + G + K + + + + + + V
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L ++ H +++++ Y++ + V L+LE +S G L D+L K+ L +
Sbjct: 68 ILRQVLHPNIITLHD----VYEN----RTDVVLILELVSGGELFDFLAQ---KESLSEEE 116
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
+ I GV +LHT I +LK ENI+L
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIML 148
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLR 505
++N+D +G+G+ + + T G + K + KL R Q L + + KL+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQ 63
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA--I 563
H ++V + + Q+ +LV + ++ G L + + ++ + + A
Sbjct: 64 HPNIVRLHD----SIQEESF----HYLVFDLVTGGELFEDIV--ARE---FYSEADASHC 110
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
I + + H+ GI NLK EN+LL
Sbjct: 111 IQQILESIAYCHSN---GIVHRNLKPENLLLA 139
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 57/217 (26%)
Query: 429 RSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ 487
S+ F+G SL E+++ + IG+GS G + + ++K + +
Sbjct: 7 HSSGRENLYFQGGSLLELQK---KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNK 63
Query: 488 RHLP-----QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542
+ + V L+ KL H ++ + Y+D + LV+E G L
Sbjct: 64 IRQINPKDVERIKTEVRLMKKLHHPNIARLYE----VYEDE----QYICLVMELCHGGHL 115
Query: 543 RDYLTDWKKKDMLKWPQRMAIIIGATR--------------------------------- 569
D L + K +
Sbjct: 116 LDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175
Query: 570 ----GVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+ +LH GI ++K EN L + ++
Sbjct: 176 QIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEI 209
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 640 | |||
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.98 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.98 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.97 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.97 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.97 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.97 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.97 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.97 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.97 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.97 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.97 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.97 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.97 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.97 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.97 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.97 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.97 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.97 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.97 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.97 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.97 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.97 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.97 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.97 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.97 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.97 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.97 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.97 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.97 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.97 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.97 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.97 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.97 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.97 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.97 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.97 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.97 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.97 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.97 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.97 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.97 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.97 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.97 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.97 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.97 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.97 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.97 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.97 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.97 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.97 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.97 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.97 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.97 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.97 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.97 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.96 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.96 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.96 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.96 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.96 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.96 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.96 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.96 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.96 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.96 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.96 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.96 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.96 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.96 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.96 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.96 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.96 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.96 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.96 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.96 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.96 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.96 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.96 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.96 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.96 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.96 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.96 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.96 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.96 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.96 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.96 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.96 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.96 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.96 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.96 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.96 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.96 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.96 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.96 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.96 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.96 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.96 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.96 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.96 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.96 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.96 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.96 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.96 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.96 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.96 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.96 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.96 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.96 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.96 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.96 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.96 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.96 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.96 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.96 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.96 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.96 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.96 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.96 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.96 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.96 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.96 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.96 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.96 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.96 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.96 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.96 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.96 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.96 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.96 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.96 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.96 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.96 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.96 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.96 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.96 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.96 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.96 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.96 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.96 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.96 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.96 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.96 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.96 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.96 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.96 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.96 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.96 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.96 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.96 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.96 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.96 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.96 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.96 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.96 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.96 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.96 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.96 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.95 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.95 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.95 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.95 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.95 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.95 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.95 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.95 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.95 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.95 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.95 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.95 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.95 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.95 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.95 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.95 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.95 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.95 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.95 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.95 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.95 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.95 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.95 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.95 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.95 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.95 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.95 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.95 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.95 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.95 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.94 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.94 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.94 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.94 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.94 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.94 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.94 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.94 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.94 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.93 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.93 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.93 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.93 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.93 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.93 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.93 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.93 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.93 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.93 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.93 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.93 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.92 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.92 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.92 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.92 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.92 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.91 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.91 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.91 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.91 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.91 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.91 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.9 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.9 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.9 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.89 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.89 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.88 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.88 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.88 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.88 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.87 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.87 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.87 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.86 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.86 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.85 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.85 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.85 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.85 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.85 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.84 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.84 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.83 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.83 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.83 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.83 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.83 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.82 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.82 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.82 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.82 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.82 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.82 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.81 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.81 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.8 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.79 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.78 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.78 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.77 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.74 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.73 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.73 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.71 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.69 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.68 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.68 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.68 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.68 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.67 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.67 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.64 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.64 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.64 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.63 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.62 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.62 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.61 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.6 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.56 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.56 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.53 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.5 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.48 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.48 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.46 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.44 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.42 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.34 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.32 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.31 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.26 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.25 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.09 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.98 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.94 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.9 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.88 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.85 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.64 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.61 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.58 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.55 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.5 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.46 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.4 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.39 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.36 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.23 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.22 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.21 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.02 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.96 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 97.95 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.81 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.72 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.62 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.38 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.28 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.23 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.22 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.08 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.03 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.03 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.98 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.76 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.64 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.63 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.36 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.27 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.23 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.0 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.71 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.36 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 94.05 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 92.26 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 81.57 | |
| 2k1k_A | 38 | Ephrin type-A receptor 1; EPHA1, receptor tyrosine | 80.88 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 80.74 |
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=366.35 Aligned_cols=292 Identities=22% Similarity=0.307 Sum_probs=259.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC--CCCCCcccEEeCC----CcEEEEEecCCCCCC--CCCCCCcCCC
Q 006570 28 QLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCY--LPSSSSLKIVCTN----SRVTELTVIGNKSSP--AHSPKPTFGK 99 (640)
Q Consensus 28 ~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~--~~~~~~~gv~C~~----~~v~~l~l~~~~~~~--~~~~~~~~~~ 99 (640)
.|.++|++||++||+++.+|..+.+|+.+++||. |. ||.|+. ++|+.|+|+++.+++ .++. .....
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~-----gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l 75 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANL 75 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGC
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCc-----ceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCC
Confidence 5788999999999999988878899988889998 76 899975 789999999999976 4432 23445
Q ss_pred ccccccccCc-cCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSA-NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~-n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
+.|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|.++++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 8899999995 888889999999999999999999999989999999999999999999999999999999999999999
Q ss_pred ccCccCCccCCC-ccCcC-cCCeeEccCCCCCCCCCCcc--cccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 179 LADNLLNGSVPD-LQRLV-LLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 179 L~~N~l~~~~~~-~~~l~-~L~~L~L~~N~l~~~~~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
|++|++++.+|. +..++ +|++|+|++|++++.+|..+ .+|+.|++++|++++.+|..|.++++|+.|+|++|++++
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 999999987776 88887 99999999999998887753 238999999999999999999999999999999999998
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc-ccCc
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC-LSGV 327 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~-l~~~ 327 (640)
.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|.. ..+++|+.+++++|. ++|.
T Consensus 236 ~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 236 DLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp BGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred ecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 7776 788999999999999999899999999999999999999999999987 788899999999997 7774
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=350.33 Aligned_cols=179 Identities=22% Similarity=0.356 Sum_probs=151.7
Q ss_pred cCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~------- 85 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV------- 85 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-------
Confidence 46777899999999999999853 47789999998655555678999999999999999999999995
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC----------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
+++..++|||||++|+|.++|+... ....++|.+++.|+.|||+||+|||+ ++||||||||+|||+
T Consensus 86 -~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl 161 (299)
T 4asz_A 86 -EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLV 161 (299)
T ss_dssp -SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred -eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEE
Confidence 3456899999999999999997532 24579999999999999999999999 799999999999999
Q ss_pred cCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 595 DKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
++++.+||+|||+|+........ +.. +.++|||||||++|||+| |.
T Consensus 162 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~ 228 (299)
T 4asz_A 162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228 (299)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 99999999999999765322110 344 999999999999999998 63
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=350.20 Aligned_cols=179 Identities=22% Similarity=0.341 Sum_probs=147.8
Q ss_pred cCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~------- 113 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT------- 113 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------
Confidence 45666789999999999999864 47889999998655555678999999999999999999999995
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCC------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKK------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
++...+||||||++|+|.++++.... ..+++|.+++.|+.|||+||+|||+ .+||||||||+||
T Consensus 114 -~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NI 189 (329)
T 4aoj_A 114 -EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNC 189 (329)
T ss_dssp -SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGE
T ss_pred -ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhE
Confidence 34568999999999999999975321 3469999999999999999999998 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|+++++.+||+|||+|+........ +.. +.++|||||||++|||+| |.
T Consensus 190 Ll~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~ 258 (329)
T 4aoj_A 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258 (329)
T ss_dssp EEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCC
Confidence 9999999999999999865322110 334 999999999999999998 63
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-41 Score=340.82 Aligned_cols=175 Identities=22% Similarity=0.337 Sum_probs=147.2
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+++...+.||+|+||+||+|++. ..||||+++.... ...++|.+|+++|++++|||||+++|+|. .
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~---------~ 103 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT---------K 103 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------S
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---------C
Confidence 456777899999999999999975 3699999975432 23467999999999999999999999873 2
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+..+||||||++|+|.++++. ....++|.+++.|+.|||+||+|||+ .+||||||||+|||+++++.+||+|||+
T Consensus 104 ~~~~iVmEy~~gGsL~~~l~~--~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGl 178 (307)
T 3omv_A 104 DNLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSS
T ss_pred CeEEEEEEcCCCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccC
Confidence 347999999999999999974 34569999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC----------Cc------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+...... +. ... +.++|||||||+||||+||.
T Consensus 179 a~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~ 234 (307)
T 3omv_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234 (307)
T ss_dssp CBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCC
Confidence 98653211 00 123 77999999999999999985
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=344.52 Aligned_cols=177 Identities=20% Similarity=0.314 Sum_probs=148.9
Q ss_pred CCCCCCccccCCccceEEEEeC------CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
+++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------- 99 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT------- 99 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-------
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-------
Confidence 3445688999999999999863 46789999997543 334678999999999999999999999995
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCc
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~N 591 (640)
.....++|||||++|+|.++|+.... ...++|.+++.|+.|||+||+|||+ .+||||||||+|
T Consensus 100 -~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~N 175 (308)
T 4gt4_A 100 -KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRN 175 (308)
T ss_dssp -SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred -ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccc
Confidence 34558999999999999999975321 2469999999999999999999999 799999999999
Q ss_pred eeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 592 ILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 592 ILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++++.+||+|||+|+........ +.. +.++|||||||+||||+| |
T Consensus 176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g 244 (308)
T 4gt4_A 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244 (308)
T ss_dssp EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCC
Confidence 99999999999999999865322110 344 999999999999999998 5
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=342.06 Aligned_cols=175 Identities=20% Similarity=0.360 Sum_probs=154.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++. +++.
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~--------~~~~ 145 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--------VGDE 145 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEE--------ETTE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------ECCE
Confidence 4688889999999999999995 569999999998766666778999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
+|||||||++|+|.+++.. ..+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+
T Consensus 146 ~~ivmEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEEECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999999999999964 358999999999999999999999 799999999999999999999999999998
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++||||+||++|||+||.
T Consensus 219 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~ 267 (346)
T 4fih_A 219 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267 (346)
T ss_dssp ECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 76432211 333 99999999999999999995
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-40 Score=378.11 Aligned_cols=295 Identities=28% Similarity=0.354 Sum_probs=209.7
Q ss_pred cccCCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCC---CCC--------
Q 006570 25 SIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPA---HSP-------- 93 (640)
Q Consensus 25 ~~~~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~---~~~-------- 93 (640)
+++++.++|++||++||+++.||..+++|+.++|||.|. ||+|+.++|+.|+|++++++|. +++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 344556889999999999998877889999888999998 8999989999999999988764 221
Q ss_pred --------------CCcCCCccccccccCccCCCChhhh--hhcCCCCCcEeecccCcCcCCCCccc-cCCCCCCEEEcc
Q 006570 94 --------------KPTFGKFSASQQSLSANFNIDRFFT--ILTKLSNLKVLSLVSLGLWGPLPSKI-NRFWSLEVLNIS 156 (640)
Q Consensus 94 --------------~~~~~~~~l~~l~l~~n~~~~~~~~--~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls 156 (640)
........|++|+|++|.+.+.+|. .++++++|++|+|++|.+.+.+|..+ .++++|++|+|+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 1122347888899999988888887 88899999999999998888888765 788888888888
Q ss_pred cCcccccCCcc---ccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCccccc
Q 006570 157 SNFIYGEIPME---ITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSE 231 (640)
Q Consensus 157 ~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~ 231 (640)
+|.+++..|.. +.++++|++|++++|.+++.+|. ..+++|++|+|++|++++.+|.. +++|++|+|++|++++.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCc
Confidence 88888777766 66777777777777777665543 56667777777777776666553 46666677777777666
Q ss_pred CCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCC-CCCCEEeccCccCcccCCCCccC
Q 006570 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS-AKLNFVEISHNLLIGKLPSCIGS 310 (640)
Q Consensus 232 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~ 310 (640)
+|..++++++|++|+|++|++++.+|.. .+++|++|+|++|++++.+|..+... ++|+.|++++|++++.+|..++.
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~ 316 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGG
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhc
Confidence 6666666666666666666666555543 55555555555555555555555443 55555555555555555555555
Q ss_pred CCCCceeeeccccccCc
Q 006570 311 NSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 311 ~~~l~~l~l~~N~l~~~ 327 (640)
+++|+.|++++|.++|.
T Consensus 317 l~~L~~L~L~~n~l~~~ 333 (768)
T 3rgz_A 317 CSLLESLALSSNNFSGE 333 (768)
T ss_dssp CTTCCEEECCSSEEEEE
T ss_pred CCCccEEECCCCcccCc
Confidence 55555555555555543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=343.70 Aligned_cols=178 Identities=17% Similarity=0.266 Sum_probs=148.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++. +.
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~--------~~ 95 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE--------EN 95 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ET
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE--------EC
Confidence 6799999999999999999994 5699999999975432 23467999999999999999999999885 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+.+|||||||++|+|.++++. +....+++.+++.|+.||+.||+|||+ .+||||||||+|||+++++.+||+|||+
T Consensus 96 ~~~yiVmEy~~gg~L~~~i~~-~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 96 GSLYIVMDYCEGGDLFKRINA-QKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp TEEEEEEECCTTCBHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred CEEEEEEeCCCCCcHHHHHHH-cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEccccc
Confidence 568999999999999999975 234567899999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+...... +. +.. +.++||||+||++|||+||.
T Consensus 172 a~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~ 222 (350)
T 4b9d_A 172 ARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222 (350)
T ss_dssp ESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 98764321 11 334 89999999999999999984
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=332.90 Aligned_cols=176 Identities=18% Similarity=0.270 Sum_probs=153.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||++++++. +
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--------~ 103 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ--------D 103 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------e
Confidence 4699999999999999999994 57999999999753 2345678999999999999999999999875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+.+|+|||||++|+|.+++++ ...+++.++..|+.||+.||+|||+ .+||||||||+|||+++++.+||+|||
T Consensus 104 ~~~~yivmEy~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 104 DEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 5679999999999999999975 3469999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCC----------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+....... . +.. +.++||||+||++|||+||.
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~ 231 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSS
T ss_pred CceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9986532211 0 333 88999999999999999994
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=343.70 Aligned_cols=175 Identities=20% Similarity=0.360 Sum_probs=155.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++. .++.
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~--------~~~~ 222 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--------VGDE 222 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEE--------ETTE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEE--------ECCE
Confidence 5688899999999999999995 569999999998766666778999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
+|||||||++|+|.++++. ..+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+
T Consensus 223 ~~iVmEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEEEEECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccce
Confidence 9999999999999999964 358999999999999999999999 799999999999999999999999999998
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++|||||||++|||++|.
T Consensus 296 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~ 344 (423)
T 4fie_A 296 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344 (423)
T ss_dssp ECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 76432211 333 99999999999999999995
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=327.43 Aligned_cols=179 Identities=21% Similarity=0.283 Sum_probs=148.1
Q ss_pred CCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 454 DPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
...+.||+|+||+||+|+. .++..||+|++..... ...+.|.+|+++|++++|||||++++++..... ....+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~----~~~~~ 104 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK----GKKCI 104 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET----TEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC----CCcEE
Confidence 3456799999999999995 4688999999975432 234679999999999999999999998863221 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfGla~ 609 (640)
|||||||++|+|.+++++ ...+++..+..|+.||+.||+|||+. .++||||||||+|||++. ++.+||+|||+|+
T Consensus 105 ~lvmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999999975 35689999999999999999999983 123999999999999984 7999999999998
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++|||||||++|||+||.
T Consensus 181 ~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~ 226 (290)
T 3fpq_A 181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 65432211 334 89999999999999999995
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=333.26 Aligned_cols=177 Identities=22% Similarity=0.351 Sum_probs=144.1
Q ss_pred CCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHH--HHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSL--MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|.+.+.||+|+||+||+|++ +|+.||||+++... .+++ ..|+..+.+++|||||+++|+|..... ....
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~----~~~~ 75 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG----TWTQ 75 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC----CceE
Confidence 466778999999999999998 58999999997542 2333 445566678899999999999974221 2245
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCCceEEeC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+|||||||++|+|.++++. ..++|..+.+|+.|+++||+|||+++ .++||||||||+|||+|+++++||+|
T Consensus 76 ~~lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 8999999999999999974 35899999999999999999999742 35999999999999999999999999
Q ss_pred CCCCccccCCCC------------c---------cC------C-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT------------L---------SF------H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~------------~---------~~------~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|+....... . +. . +.++|||||||++|||+||+
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~ 215 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 215 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCC
Confidence 999976532211 0 11 2 56899999999999999984
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=319.79 Aligned_cols=175 Identities=22% Similarity=0.363 Sum_probs=143.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++. +
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--------~ 84 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK--------S 84 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE--------E
Confidence 5799999999999999999994 579999999997532 234567999999999999999999999875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..|+||||| +|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 85 ~~~~~ivmEy~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 85 KDEIIMVIEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp SSEEEEEEECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred CCEEEEEEeCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecC
Confidence 56799999999 6799999975 4569999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++||||+||++|||+||.
T Consensus 158 la~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~ 209 (275)
T 3hyh_A 158 LSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209 (275)
T ss_dssp CC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCC
Confidence 99865432211 222 67999999999999999995
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=338.81 Aligned_cols=190 Identities=21% Similarity=0.325 Sum_probs=158.9
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEeCC------CcEEEEEEeecccC-CChHHHHHHHHHHhcCCC-ccccee
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH-RHLVSI 512 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l 512 (640)
++.++++...++|++.+.||+|+||+||+|++.. ++.||||+++.... ...++|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4566777778899999999999999999998532 36899999975432 234679999999999965 899999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCC
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVA 579 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 579 (640)
+|+|.. .+..+++|||||++|+|.++|+..+ ....++|.+++.|+.|||+||+|||+
T Consensus 134 ~g~~~~-------~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~--- 203 (353)
T 4ase_A 134 LGACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 203 (353)
T ss_dssp EEEECC-------TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---
T ss_pred EEEEEe-------cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---
Confidence 999852 3456899999999999999997532 13458999999999999999999999
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL- 638 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt- 638 (640)
.+||||||||+|||+++++.+||+|||+|+........ +.. +.++|||||||+||||+|
T Consensus 204 ~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~ 283 (353)
T 4ase_A 204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283 (353)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence 79999999999999999999999999999876432211 334 999999999999999998
Q ss_pred cC
Q 006570 639 CC 640 (640)
Q Consensus 639 G~ 640 (640)
|.
T Consensus 284 G~ 285 (353)
T 4ase_A 284 GA 285 (353)
T ss_dssp SC
T ss_pred CC
Confidence 63
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=330.26 Aligned_cols=171 Identities=19% Similarity=0.270 Sum_probs=146.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.... ..+|+++|++++|||||++++++. ++..
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~--------~~~~ 124 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVR--------EGPW 124 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEE--------ETTE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEE--------ECCE
Confidence 4567778899999999999995 5689999999975432 247999999999999999999885 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNIP 608 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGla 608 (640)
+|||||||++|+|.++++. ...+++.++..|+.||+.||+|||+ .+||||||||+|||++.++ .+||+|||+|
T Consensus 125 ~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla 198 (336)
T 4g3f_A 125 VNIFMELLEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHA 198 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCC
Confidence 8999999999999999975 3469999999999999999999998 7999999999999999987 6999999999
Q ss_pred ccccCCC-------------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN-------------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~-------------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... +. +.. +.++|||||||++|||+||.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~ 253 (336)
T 4g3f_A 199 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253 (336)
T ss_dssp EEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCc
Confidence 8653211 11 334 89999999999999999995
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=329.13 Aligned_cols=176 Identities=19% Similarity=0.264 Sum_probs=144.1
Q ss_pred cCCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|++.+.||+|+||+||+|+. .+++.||||+++... .....++.+|+++|++++|||||++++++.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~------- 96 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ------- 96 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-------
Confidence 4688899999999999999984 247899999997532 223357889999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+.+.+|+|||||++|+|.+++++ ...+++.++..++.|++.||+|||+ .+||||||||+|||+++++.+||+|
T Consensus 97 -~~~~~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 97 -TEGKLYLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp -ETTEEEEEECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEES
T ss_pred -ECCEEEEEEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecc
Confidence 34568999999999999999975 3469999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|+....... . +.. +.++||||+||++|||+||.
T Consensus 170 FGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~ 223 (304)
T 3ubd_A 170 FGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223 (304)
T ss_dssp SEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCC
Confidence 999986432211 0 334 89999999999999999995
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=323.06 Aligned_cols=185 Identities=17% Similarity=0.352 Sum_probs=145.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC----C
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH----P 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~----~ 524 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++....... .
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4688899999999999999994 5789999999975432 23467899999999999999999999986432110 1
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
......|+|||||++|+|.++++........++..++.|+.|++.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence 1234579999999999999999864333456677889999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCC--------------------Cc---------cCC-CCccceehhhHHHHHHhh
Q 006570 605 YNIPLPSKVRN--------------------TL---------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 605 fGla~~~~~~~--------------------~~---------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+|+...... +. +.. +.++|||||||++|||++
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~ 225 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc
Confidence 99998653211 11 334 899999999999999986
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=351.56 Aligned_cols=293 Identities=14% Similarity=0.130 Sum_probs=253.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCC---------CCCCCCCCCCCCCCCCCcccEEeCC-CcEEEEEecCCCCCCCCCCCCcC
Q 006570 28 QLTPSETRILFQVQKLLEYPEV---------LQGWTDWTNFCYLPSSSSLKIVCTN-SRVTELTVIGNKSSPAHSPKPTF 97 (640)
Q Consensus 28 ~~~~~~~~~l~~~k~~~~~~~~---------l~~W~~~~~~C~~~~~~~~gv~C~~-~~v~~l~l~~~~~~~~~~~~~~~ 97 (640)
+....|+.||.+++.+++++.+ ..+|+.++++|.|. .+.||+|+. +||++|+|++++++|.+++ ...
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~ 102 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWG--AQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIG 102 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTT--CCTTEEECTTCCEEEEECTTSCCEEEECG-GGG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccccc--CCCCeEEcCCCCEEEEEecCcccCCcCCh-HHh
Confidence 3345799999999999875531 23799889999992 123899965 7999999999999887763 234
Q ss_pred CCccccccccCccCC-----------------------------------------------------------------
Q 006570 98 GKFSASQQSLSANFN----------------------------------------------------------------- 112 (640)
Q Consensus 98 ~~~~l~~l~l~~n~~----------------------------------------------------------------- 112 (640)
..+.|+.|+|++|.+
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 468999999998833
Q ss_pred -------------CChhhhhhcCCCCCcEeecccCcCcCC-----------------CCcccc--CCCCCCEEEcccCcc
Q 006570 113 -------------IDRFFTILTKLSNLKVLSLVSLGLWGP-----------------LPSKIN--RFWSLEVLNISSNFI 160 (640)
Q Consensus 113 -------------~~~~~~~l~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l 160 (640)
.+ +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|++|.+
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 24 788899999999999999999986 999999 999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCcc-CCc-cCCC-ccCc------CcCCeeEccCCCCCCCCCC--c---ccccceeecccC
Q 006570 161 YGEIPMEITSLKNLKSIVLADNL-LNG-SVPD-LQRL------VLLEELNLGGNDFGPKFPS--L---SKNIVSVILRNN 226 (640)
Q Consensus 161 ~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~-~~~l------~~L~~L~L~~N~l~~~~~~--~---~~~L~~L~l~~N 226 (640)
.+.+|..|+++++|++|+|++|+ ++| .+|. ++++ ++|++|+|++|+++ .+|. . +++|+.|++++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 99999999999999999999998 998 6664 7666 99999999999999 6666 3 789999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccCcCCccccCCCC-CcEEEccCCcCCccCCccccCCC--CCCEEeccCccCccc
Q 006570 227 SLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS-ILYLNLAGNQLSEALPVNISCSA--KLNFVEISHNLLIGK 303 (640)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~--~L~~L~ls~N~l~~~ 303 (640)
+++|.+| .|+++++|+.|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|++++.
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred cCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 9999999 9999999999999999999 78888999999 999999999998 6888887765 899999999999999
Q ss_pred CCCCcc-------CCCCCceeeeccccccCcc
Q 006570 304 LPSCIG-------SNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 304 ~p~~~~-------~~~~l~~l~l~~N~l~~~~ 328 (640)
+|..+. .+.+|+.|++++|+++..+
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp 449 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQISKFP 449 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCCSCC
T ss_pred chhhhcccccccccCCCCCEEECcCCccCcCC
Confidence 999888 7889999999999998543
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=347.97 Aligned_cols=291 Identities=14% Similarity=0.143 Sum_probs=219.8
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCCCCCCCCCC-----CC--CCCCC----CCc---ccEEeC-CCcEEEEEecCCCCCCCC
Q 006570 27 GQLTPSETRILFQVQKLLEYPEVLQGWTDWT-----NF--CYLPS----SSS---LKIVCT-NSRVTELTVIGNKSSPAH 91 (640)
Q Consensus 27 ~~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~-----~~--C~~~~----~~~---~gv~C~-~~~v~~l~l~~~~~~~~~ 91 (640)
++...+|+.||++||+++.+| +|+.++ +| |.|.- ..| .||.|+ .+||+.|+|++++++|.+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred cccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 344568999999999999876 786544 66 88800 012 489998 489999999999998877
Q ss_pred CCCCcCCCcccccccc-CccCCCCh-------------------------------------------------------
Q 006570 92 SPKPTFGKFSASQQSL-SANFNIDR------------------------------------------------------- 115 (640)
Q Consensus 92 ~~~~~~~~~~l~~l~l-~~n~~~~~------------------------------------------------------- 115 (640)
++ .....+.|+.|+| ++|.+.|.
T Consensus 340 p~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 340 PD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp CG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred ch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 63 2344689999999 66643332
Q ss_pred ---------------------hhhhhcCCCCCcEeecccCcCcC-----------------CCCcccc--CCCCCCEEEc
Q 006570 116 ---------------------FFTILTKLSNLKVLSLVSLGLWG-----------------PLPSKIN--RFWSLEVLNI 155 (640)
Q Consensus 116 ---------------------~~~~l~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~L 155 (640)
+|..|++|++|++|+|++|.+++ .+|..++ ++++|++|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 67778888888888888888877 3787777 8888888888
Q ss_pred ccCcccccCCccccCCCCCCEEEccCcc-CCc-cCCC-ccCcC-------cCCeeEccCCCCCCCCCC--c---ccccce
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNL-LNG-SVPD-LQRLV-------LLEELNLGGNDFGPKFPS--L---SKNIVS 220 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~-~~~l~-------~L~~L~L~~N~l~~~~~~--~---~~~L~~ 220 (640)
++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|. +.+++ +|++|+|++|+++ .+|. . +++|+.
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 8888888888888888888888888887 887 5553 55444 8888888888887 5665 2 678888
Q ss_pred eecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCC-CcEEEccCCcCCccCCccccCCCC--CCEEeccC
Q 006570 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS-ILYLNLAGNQLSEALPVNISCSAK--LNFVEISH 297 (640)
Q Consensus 221 L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~~--L~~L~ls~ 297 (640)
|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++ .+|..+..++. |+.|++++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 888888887 777 7888888888888888888 67777888887 888888888887 57777766654 88888888
Q ss_pred ccCcccCCCCc---c--CCCCCceeeeccccccCc
Q 006570 298 NLLIGKLPSCI---G--SNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 298 N~l~~~~p~~~---~--~~~~l~~l~l~~N~l~~~ 327 (640)
|++++.+|... . .+.+|+.|++++|+++..
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~l 688 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKF 688 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSC
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCCcc
Confidence 88877666432 2 234677778888777743
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=318.77 Aligned_cols=181 Identities=16% Similarity=0.272 Sum_probs=150.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++... ..+.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPT--VPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS--SCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecc--cccccC
Confidence 4688899999999999999994 5799999999975432 2245788999999999999999999987532 122345
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..+|||||||+ |+|.+++.. ...+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecce
Confidence 67999999996 689999964 4579999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC------------Cc---------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN------------TL---------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~------------~~---------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+...... +. +. . +.++||||+||++|||+||.
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~ 260 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTS
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCC
Confidence 98652210 00 22 3 88999999999999999984
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=336.77 Aligned_cols=272 Identities=27% Similarity=0.350 Sum_probs=195.0
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|++++|.+++.++. .....+.|+.|+|++|.+.+.+|..+.++++|++|+|++|.+++.+|..+..+++|++|+|
T Consensus 395 ~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 473 (768)
T 3rgz_A 395 TLQELYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473 (768)
T ss_dssp CCCEEECCSSEEEEECCG-GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CccEEECCCCccccccCH-HHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEe
Confidence 344555555544332211 1122355666666666666666666666666666666666666666666666666666666
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCccccc
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSE 231 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~ 231 (640)
++|++++.+|..+.++++|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|.. +++|+.|++++|+++|.
T Consensus 474 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 553 (768)
T 3rgz_A 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESB
T ss_pred cCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCc
Confidence 66666666666666666666666666666666554 666666666666666666666654 45666666666666655
Q ss_pred CCc----------------------------------------------------------------------cccCCCC
Q 006570 232 IPS----------------------------------------------------------------------GLKNFDQ 241 (640)
Q Consensus 232 ~p~----------------------------------------------------------------------~~~~l~~ 241 (640)
+|. .+.++++
T Consensus 554 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~ 633 (768)
T 3rgz_A 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS 633 (768)
T ss_dssp CCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBC
T ss_pred CChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcccc
Confidence 554 4445678
Q ss_pred ccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecc
Q 006570 242 LKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321 (640)
Q Consensus 242 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~ 321 (640)
|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.|+.+++++
T Consensus 634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccCCCCC-----CCCccccccccCCCC
Q 006570 322 NCLSGVNTKYQH-----PYSFCRKEALAVKPP 348 (640)
Q Consensus 322 N~l~~~~~~~~~-----~~~~~~~~~~~~~~~ 348 (640)
|+++|.+|.... +.++.+++.+|+.|.
T Consensus 714 N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 745 (768)
T ss_dssp SEEEEECCSSSSGGGSCGGGGCSCTEEESTTS
T ss_pred CcccccCCCchhhccCCHHHhcCCchhcCCCC
Confidence 999998875321 234556666666543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=322.62 Aligned_cols=177 Identities=17% Similarity=0.236 Sum_probs=149.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHH---HHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQ---HVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... ........+ ++++++.++|||||++++++.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~----- 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH----- 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-----
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE-----
Confidence 35788999999999999999994 569999999997532 223333333 466778889999999998874
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+...+|+|||||+||+|.++|.. ...+++..+..|+.||+.||+|||+ .+||||||||+|||+|.+|.+||
T Consensus 263 ---~~~~lylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 263 ---TPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp ---CSSEEEEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEE
T ss_pred ---ECCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEe
Confidence 45679999999999999999975 3569999999999999999999999 79999999999999999999999
Q ss_pred eCCCCCccccCCCCc---------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL---------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~---------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+|+........ .. . +.++||||+||++|||++|.
T Consensus 334 ~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~ 388 (689)
T 3v5w_A 334 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388 (689)
T ss_dssp CCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999876433221 22 3 88999999999999999994
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=303.24 Aligned_cols=266 Identities=18% Similarity=0.244 Sum_probs=218.5
Q ss_pred cCCCHHHHHHHHHHHHhC-CCC-CCCCCC----CCCCCCCCCCCCCcccEEeCC----------CcEEEEEecCCCCCCC
Q 006570 27 GQLTPSETRILFQVQKLL-EYP-EVLQGW----TDWTNFCYLPSSSSLKIVCTN----------SRVTELTVIGNKSSPA 90 (640)
Q Consensus 27 ~~~~~~~~~~l~~~k~~~-~~~-~~l~~W----~~~~~~C~~~~~~~~gv~C~~----------~~v~~l~l~~~~~~~~ 90 (640)
.++..+|++||++||+.+ .++ ..+.+| +.+.++|.|. |+.|+. .+|+.|+|+++.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~~~l~~~~~~~l~~L~L~~n~l--- 93 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATADLLEDATQPGRVALELRSVPL--- 93 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHHHHHHHHTSTTCCEEEEESSCC---
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhHHHHhcccccceeEEEccCCCc---
Confidence 445568999999999988 345 356788 3457889887 798842 5677777766655
Q ss_pred CCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccC
Q 006570 91 HSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITS 170 (640)
Q Consensus 91 ~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 170 (640)
. .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..+.+
T Consensus 94 ----------------------~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~ 148 (328)
T 4fcg_A 94 ----------------------P-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIAS 148 (328)
T ss_dssp ----------------------S-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGG
T ss_pred ----------------------h-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhc
Confidence 2 34556777888888888888886 78888888888888888888888 78888888
Q ss_pred CCCCCEEEccCccCCccCCC-cc---------CcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc
Q 006570 171 LKNLKSIVLADNLLNGSVPD-LQ---------RLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK 237 (640)
Q Consensus 171 l~~L~~L~L~~N~l~~~~~~-~~---------~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~ 237 (640)
+++|++|+|++|++.+.+|. +. ++++|++|+|++|+++ .+|.. +++|+.|+|++|++++ +|..++
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc
Confidence 88888888888887777765 44 3888999999999887 45543 6788889999999984 677899
Q ss_pred CCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCcee
Q 006570 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTV 317 (640)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l 317 (640)
++++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.|++++|++.+.+|..++.+++++.+
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l 306 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCII 306 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEE
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccCc
Q 006570 318 VSTWNCLSGV 327 (640)
Q Consensus 318 ~l~~N~l~~~ 327 (640)
++..|.+...
T Consensus 307 ~l~~~~~~~l 316 (328)
T 4fcg_A 307 LVPPHLQAQL 316 (328)
T ss_dssp ECCGGGSCC-
T ss_pred eCCHHHHHHH
Confidence 9987766543
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=305.13 Aligned_cols=174 Identities=15% Similarity=0.228 Sum_probs=147.6
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
...+.|++.+.||+|+||+||+|+.+ +++.||||++... ....++.+|+++|+.+ +|||||++++++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~----- 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFR----- 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE-----
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEE-----
Confidence 34578999999999999999999742 4678999998643 3456788999999998 6999999998875
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAK 601 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~k 601 (640)
..+.+|+|||||++|+|.++++ .+++.++..++.|++.||+|||+ .+||||||||+|||++.+ +.+|
T Consensus 91 ---~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 91 ---KNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp ---ETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEE
T ss_pred ---ECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEE
Confidence 3457999999999999999984 38899999999999999999999 799999999999999887 8999
Q ss_pred EeCCCCCccccCC------------------------------------CCc---------c-CC-CCccceehhhHHHH
Q 006570 602 LSGYNIPLPSKVR------------------------------------NTL---------S-FH-TDRSSLYKIILIIC 634 (640)
Q Consensus 602 l~DfGla~~~~~~------------------------------------~~~---------~-~~-~~~~DvwS~Gvvl~ 634 (640)
|+|||+|+..... ++. + .. +.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 9999999753211 011 2 23 88999999999999
Q ss_pred HHhhcC
Q 006570 635 VITLCC 640 (640)
Q Consensus 635 elltG~ 640 (640)
||+||.
T Consensus 239 ell~G~ 244 (361)
T 4f9c_A 239 SLLSGR 244 (361)
T ss_dssp HHHHTC
T ss_pred HHHHCC
Confidence 999994
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=320.66 Aligned_cols=178 Identities=15% Similarity=0.262 Sum_probs=154.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||+||+|+. .+|+.||+|++........+.+.+|+++|+.++|||||++++++. +..
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--------~~~ 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE--------DDN 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE--------CSS
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEE--------ECC
Confidence 36799999999999999999995 569999999997654445678899999999999999999999885 456
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC--CceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--LTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--~~~kl~DfG 606 (640)
.+|+|||||++|+|.+++.. ....+++.++..|+.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 228 ~~~iv~E~~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 228 EMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEEEEECCCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEEEEeecCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeecc
Confidence 79999999999999999964 34568999999999999999999999 799999999999999864 899999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++||||+||++|||++|.
T Consensus 303 ~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~ 353 (573)
T 3uto_A 303 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353 (573)
T ss_dssp SCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred ceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99876543211 333 88999999999999999985
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=288.79 Aligned_cols=229 Identities=24% Similarity=0.337 Sum_probs=216.5
Q ss_pred ccccccccCccCCCC--hhhhhhcCCCCCcEeeccc-CcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 006570 100 FSASQQSLSANFNID--RFFTILTKLSNLKVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~--~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 176 (640)
..++.|+|++|.+.+ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 378899999999998 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---cc-ccceeecccCcccccCCccccCCCCccEEEccCCc
Q 006570 177 IVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SK-NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251 (640)
Q Consensus 177 L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 251 (640)
|+|++|.+++.+|. +..+++|++|+|++|++++.+|.. ++ +|+.|++++|++++.+|..+..++ |+.|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999988776 999999999999999999888865 34 899999999999999999999998 9999999999
Q ss_pred ccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccCC
Q 006570 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330 (640)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~~ 330 (640)
+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|++++|++++.+|..+..+++|+.|++++|+++|..|.
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 9999999999999999999999999987776 88899999999999999999999999999999999999999988764
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=289.82 Aligned_cols=195 Identities=29% Similarity=0.542 Sum_probs=165.7
Q ss_pred CCCCCHHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEE
Q 006570 438 FRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHC 516 (640)
Q Consensus 438 ~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~ 516 (640)
.+.++++++....++|+..+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456888999999999999999999999999999988899999999975432 2334799999999999999999999998
Q ss_pred EecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 517 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
. .....++||||+++|+|.++++... ....+++..+..++.|++.||+|||+.+.++|+||||||+||+++
T Consensus 97 ~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 97 M--------TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp C--------CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred e--------cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 5 3445799999999999999998643 234599999999999999999999994444999999999999999
Q ss_pred CCCceEEeCCCCCccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++.+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 232 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCC
Confidence 9999999999999765322111 233 88999999999999999984
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=289.26 Aligned_cols=188 Identities=33% Similarity=0.552 Sum_probs=160.8
Q ss_pred CHHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 442 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
++.++...+++|+..+.||+|+||.||+|+..+++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 105 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD---- 105 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC----
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence 3345556788999999999999999999998889999999988665556678999999999999999999999884
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCce
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTA 600 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 600 (640)
.....++||||+++|+|.+++.... ....++|.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 106 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~ 178 (321)
T 2qkw_B 106 ----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVP 178 (321)
T ss_dssp ----CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCE
T ss_pred ----CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCE
Confidence 3456899999999999999997532 23468999999999999999999999 799999999999999999999
Q ss_pred EEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++....... + +.. +.++|||||||++|||+||.
T Consensus 179 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~ 238 (321)
T 2qkw_B 179 KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238 (321)
T ss_dssp EECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCC
T ss_pred EEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCC
Confidence 9999999975432110 0 233 88999999999999999984
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=281.51 Aligned_cols=176 Identities=18% Similarity=0.367 Sum_probs=154.6
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||+||+|+ ..+++.||||++........+.+.+|+.++++++||||+++++++. .+.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~ 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL--------VGD 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ETT
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEE--------ECC
Confidence 3579999999999999999998 4678999999998766666788999999999999999999999886 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 91 ELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEEEEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEECCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 68999999999999999974 258999999999999999999999 69999999999999999999999999998
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ +.. +.++|||||||++|||+||.
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 213 (297)
T 3fxz_A 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213 (297)
T ss_dssp EECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 765432211 334 88999999999999999984
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=282.95 Aligned_cols=186 Identities=19% Similarity=0.315 Sum_probs=160.1
Q ss_pred CCCHHHHHHHhcC----------CCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc
Q 006570 440 GFSLEEIEEATNN----------FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508 (640)
Q Consensus 440 ~~~~~~l~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 508 (640)
.++.++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4778888877764 556678999999999999965 79999999998766666788999999999999999
Q ss_pred cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 509 iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
|+++++++.. +...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+|||||
T Consensus 104 iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlk 168 (321)
T 2c30_A 104 VVEMYKSYLV--------GEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIK 168 (321)
T ss_dssp BCCEEEEEEE--------TTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred cceEEEEEEE--------CCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCC
Confidence 9999999862 3468999999999999999853 458999999999999999999999 699999999
Q ss_pred CCceeecCCCceEEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+||+++.++.+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~ 238 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999998765432110 233 88999999999999999984
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-31 Score=291.65 Aligned_cols=267 Identities=18% Similarity=0.155 Sum_probs=185.9
Q ss_pred CCCCCCCCCCcccEEeCC----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChh-hhhhcCCCC
Q 006570 57 TNFCYLPSSSSLKIVCTN----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRF-FTILTKLSN 125 (640)
Q Consensus 57 ~~~C~~~~~~~~gv~C~~----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~-~~~l~~l~~ 125 (640)
...|.|.+ ..|.|+. .+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+.+ +..|.++++
T Consensus 5 ~~~c~~~~---~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~ 80 (455)
T 3v47_A 5 TSECSVIG---YNAICINRGLHQVPELPAHVNYVDLSLNSIAELN-ETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80 (455)
T ss_dssp --CCEEET---TEEECCSSCCSSCCCCCTTCCEEECCSSCCCEEC-TTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTT
T ss_pred cceeEEEc---cccCcCCCCcccCCCCCCccCEEEecCCccCcCC-hhHhccCccccEEECcCCcccceECccccccccc
Confidence 34565542 2488864 35899999999885432 223445688999999999887555 567899999
Q ss_pred CcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCcc--ccCCCCCCEEEccCccCCccCCC--ccCcCcCCeeE
Q 006570 126 LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPME--ITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELN 201 (640)
Q Consensus 126 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~ 201 (640)
|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|++++..|. +.++++|++|+
T Consensus 81 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 160 (455)
T 3v47_A 81 LIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD 160 (455)
T ss_dssp CCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEE
T ss_pred CCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEe
Confidence 999999999998888888999999999999999998766655 88899999999999999988775 78889999999
Q ss_pred ccCCCCCCCCCCcc-------------------------------------cccceeecccCcc----------------
Q 006570 202 LGGNDFGPKFPSLS-------------------------------------KNIVSVILRNNSL---------------- 228 (640)
Q Consensus 202 L~~N~l~~~~~~~~-------------------------------------~~L~~L~l~~N~l---------------- 228 (640)
|++|++++..|..+ ++|+.|++++|++
T Consensus 161 L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~ 240 (455)
T 3v47_A 161 LTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK 240 (455)
T ss_dssp CTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCC
T ss_pred CCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccc
Confidence 99998877655321 2455555555544
Q ss_pred -----------------------------------------------cccCCccccCCCCccEEEccCCcccCcCCcccc
Q 006570 229 -----------------------------------------------RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261 (640)
Q Consensus 229 -----------------------------------------------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 261 (640)
++.+|..|.++++|++|+|++|++++..|..|.
T Consensus 241 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 320 (455)
T 3v47_A 241 IQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFW 320 (455)
T ss_dssp EEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred eeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhc
Confidence 444455555566666666666666655555566
Q ss_pred CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 262 ~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++++|++|+|++|++++..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.
T Consensus 321 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 321 GLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp TCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 666666666666666555555555666666666666666655565666666666666666666553
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-32 Score=296.29 Aligned_cols=185 Identities=14% Similarity=0.176 Sum_probs=156.4
Q ss_pred HHHHHHHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 443 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
+.++....++|+..+.||+|+||+||+|+.. +++.||||+++.. .....+.+.+|++++..++||||+++++++.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~- 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ- 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE-
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-
Confidence 4455566788999999999999999999965 5789999999752 2223345889999999999999999999885
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
+....|+|||||++|+|.++++. ....+++..+..++.|++.||+|||+ .+||||||||+|||++.++
T Consensus 145 -------~~~~~~lV~Ey~~gg~L~~~l~~--~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 145 -------DDNNLYLVMDYYVGGDLLTLLSK--FEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp -------CSSEEEEEECCCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTS
T ss_pred -------eCCEEEEEEecCCCCcHHHHHHH--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCC
Confidence 45678999999999999999974 24569999999999999999999999 7999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC---------c--------c-----C-C-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNT---------L--------S-----F-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~---------~--------~-----~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++....... . . . . +.++|||||||++|||++|.
T Consensus 213 ~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~ 278 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278 (437)
T ss_dssp CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence 999999999975432211 0 1 2 2 88999999999999999985
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-32 Score=276.44 Aligned_cols=191 Identities=34% Similarity=0.533 Sum_probs=164.2
Q ss_pred CCCCCHHHHHHHhcCCCCC------CccccCCccceEEEEeCCCcEEEEEEeeccc----CCChHHHHHHHHHHhcCCCc
Q 006570 438 FRGFSLEEIEEATNNFDPT------NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHR 507 (640)
Q Consensus 438 ~~~~~~~~l~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 507 (640)
...|+++++..++++|... +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999887 8999999999999997 58899999987532 22356799999999999999
Q ss_pred ccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC
Q 006570 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (640)
Q Consensus 508 niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 587 (640)
||+++++++. .....++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||
T Consensus 91 ~i~~~~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl 159 (307)
T 2nru_A 91 NLVELLGFSS--------DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDI 159 (307)
T ss_dssp TBCCEEEEEC--------SSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred CeEEEEEEEe--------cCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCC
Confidence 9999999884 344589999999999999999754445679999999999999999999999 79999999
Q ss_pred CCCceeecCCCceEEeCCCCCccccCCCC----------c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 588 KTENILLDKALTAKLSGYNIPLPSKVRNT----------L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 588 k~~NILl~~~~~~kl~DfGla~~~~~~~~----------~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+||++++++.+||+|||+++....... . ... +.++||||||+++|||++|.
T Consensus 160 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~ 231 (307)
T 2nru_A 160 KSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGL 231 (307)
T ss_dssp CGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCC
T ss_pred CHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCC
Confidence 99999999999999999999876533211 0 233 88999999999999999984
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=284.23 Aligned_cols=177 Identities=22% Similarity=0.333 Sum_probs=152.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++. .
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--------~ 85 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE--------T 85 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------E
Confidence 46788899999999999999995 6799999999975432 23467889999999999999999999985 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 86 EKTLYLIMEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp SSEEEEEECCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred CCEEEEEEECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeecc
Confidence 4568999999999999999975 3458999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||+||++|||+||.
T Consensus 160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 211 (328)
T 3fe3_A 160 FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 211 (328)
T ss_dssp CCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSS
T ss_pred CceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCC
Confidence 99765432111 223 57899999999999999984
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=283.00 Aligned_cols=176 Identities=16% Similarity=0.220 Sum_probs=151.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+|+.||+|+++.. .....+.+.+|+++++.++||||+++++++. .
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--------~ 76 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ--------T 76 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE--------C
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEE--------e
Confidence 5688889999999999999995 46899999999753 2345678899999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 77 ~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 77 HDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeecc
Confidence 4578999999999999999975 3468999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 151 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 202 (337)
T 1o6l_A 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202 (337)
T ss_dssp TCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSS
T ss_pred chhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCC
Confidence 99763221110 233 88999999999999999984
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-32 Score=279.98 Aligned_cols=177 Identities=16% Similarity=0.326 Sum_probs=152.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|...+.||+|+||+||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++. .+..
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~~ 81 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY--------KDKR 81 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------ETTE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe--------cCCe
Confidence 4677889999999999999995 468999999986554455678999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.++++. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 82 LNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp EEEEEECCTTCBHHHHHHH--CCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccce
Confidence 8999999999999999975 24568999999999999999999999 699999999999999999999999999997
Q ss_pred cccCCC----------------------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRN----------------------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~----------------------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... + + +.. +.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 219 (310)
T 3s95_A 157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219 (310)
T ss_dssp ECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred ecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCC
Confidence 642211 0 0 333 88999999999999999884
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-32 Score=278.75 Aligned_cols=176 Identities=19% Similarity=0.256 Sum_probs=152.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++. +
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~--------~ 77 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ--------D 77 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE--------C
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE--------e
Confidence 5688889999999999999995 46899999999753 2344577889999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 78 ~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 78 AQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecC
Confidence 4578999999999999999975 3468999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 152 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 200 (318)
T 1fot_A 152 FAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200 (318)
T ss_dssp SCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred cceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCC
Confidence 99765432211 233 88999999999999999984
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=282.43 Aligned_cols=184 Identities=23% Similarity=0.377 Sum_probs=148.2
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++.....+|++.+.||+|+||+||+|+. +|+.||||++...... ..+++.+|++++++++||||+++++++.
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 104 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT----- 104 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----
Confidence 3344456788899999999999999987 5889999999754322 2357889999999999999999999884
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCce
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTA 600 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~~ 600 (640)
.....++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+
T Consensus 105 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~ 178 (309)
T 3p86_A 105 ---QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTV 178 (309)
T ss_dssp ---STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCE
T ss_pred ---ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcE
Confidence 344589999999999999999753222348999999999999999999998 57 9999999999999999999
Q ss_pred EEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 179 kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 236 (309)
T 3p86_A 179 KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236 (309)
T ss_dssp EECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCC
T ss_pred EECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999754322110 333 88999999999999999984
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-32 Score=280.37 Aligned_cols=188 Identities=18% Similarity=0.345 Sum_probs=153.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccC-----
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD----- 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----- 522 (640)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++......
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 456888999999999999999964 789999999975432 3457899999999999999999999998643210
Q ss_pred --------------------------------------------CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHH
Q 006570 523 --------------------------------------------HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558 (640)
Q Consensus 523 --------------------------------------------~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~ 558 (640)
........++||||+++|+|.+++.........++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 001223489999999999999999865444556778
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCC--------------------Cc-
Q 006570 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN--------------------TL- 617 (640)
Q Consensus 559 ~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~--------------------~~- 617 (640)
.++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...... +.
T Consensus 165 ~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 899999999999999998 699999999999999999999999999998654321 00
Q ss_pred --------cCC-CCccceehhhHHHHHHhhcC
Q 006570 618 --------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 618 --------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.. +.++|||||||++|||++|.
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~ 273 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSF 273 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcC
Confidence 334 89999999999999999873
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-32 Score=284.70 Aligned_cols=178 Identities=20% Similarity=0.282 Sum_probs=150.7
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|.++++.+ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~------ 94 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ------ 94 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE------
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE------
Confidence 346899999999999999999995 46899999999753 234456788999999988 7999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 95 --~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 95 --TPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEEC
T ss_pred --eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEc
Confidence 45578999999999999999975 3458999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++........ +.. +.++|||||||++|||++|.
T Consensus 167 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 221 (353)
T 3txo_A 167 DFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221 (353)
T ss_dssp CCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSS
T ss_pred cccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCC
Confidence 99999864221110 223 88999999999999999984
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-32 Score=291.56 Aligned_cols=182 Identities=13% Similarity=0.184 Sum_probs=154.0
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
.++....++|+..+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+++++.++||||+++++++.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-- 139 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 139 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 344455678999999999999999999954 5889999999752 2233456889999999999999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
+....|+|||||++|+|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 140 ------~~~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 140 ------DDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp ------CSSEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSC
T ss_pred ------ECCEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCC
Confidence 45678999999999999999964 348999999999999999999999 79999999999999999999
Q ss_pred eEEeCCCCCccccCCCC---------c---------c----C-CCCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNT---------L---------S----F-HTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~---------~---------~----~-~~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++....... . . . .+.++|||||||++|||+||.
T Consensus 207 ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~ 270 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270 (410)
T ss_dssp EEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSS
T ss_pred EEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCC
Confidence 99999999976543210 0 1 1 257999999999999999984
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-32 Score=285.76 Aligned_cols=179 Identities=18% Similarity=0.375 Sum_probs=149.9
Q ss_pred hcCCCCCCccccCCccceEEEEe--------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL--------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|++.+.||+|+||.||+|+. .++..||||+++.... ...+++.+|+++++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence 35788889999999999999984 2356799999975422 2346789999999999 8999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....|+||||+++|+|.++++.... ...+++.+++.++.|++.||+|||+ .+|+|||
T Consensus 158 ------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrD 228 (370)
T 2psq_A 158 ------QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 228 (370)
T ss_dssp ------SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred ------cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccc
Confidence 34558999999999999999976321 2458999999999999999999999 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+|||++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 302 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999985532211 1 333 889999999999999998 5
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-32 Score=285.38 Aligned_cols=177 Identities=15% Similarity=0.207 Sum_probs=148.7
Q ss_pred hcCCCCCCccccCCccceEEEE------eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC---CcccceeeeEEEecc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF------LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR---HRHLVSILGHCILTY 520 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~ 520 (640)
.++|.+.+.||+|+||+||+|+ ..+++.||||+++.. ...++.+|++++++++ |+||+++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~--- 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL--- 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE---
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeee---
Confidence 4678888999999999999994 446889999999743 4577888888888887 999999999986
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccC--CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWK--KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-- 596 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-- 596 (640)
.....++|||||++|+|.++++..+ ....+++..++.|+.|++.||+|||+ .+||||||||+|||++.
T Consensus 138 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 138 -----FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp -----CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGG
T ss_pred -----cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccc
Confidence 3455899999999999999997432 34569999999999999999999999 79999999999999998
Q ss_pred ---------CCceEEeCCCCCccccCCC----------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 597 ---------ALTAKLSGYNIPLPSKVRN----------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 597 ---------~~~~kl~DfGla~~~~~~~----------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++.+||+|||+++...... +. +.. +.++|||||||++|||+||.
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 282 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 8999999999996542110 10 334 89999999999999999995
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-31 Score=285.07 Aligned_cols=255 Identities=16% Similarity=0.100 Sum_probs=203.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCcc--ccCCCCCCE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK--INRFWSLEV 152 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~ 152 (640)
.+++.|+|++|.+.+.+++..+...++|++|+|++|.+.+..|..|+++++|++|+|++|.+++.+|.. |..+++|++
T Consensus 54 ~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~ 133 (455)
T 3v47_A 54 QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEM 133 (455)
T ss_dssp TTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCE
T ss_pred ccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCE
Confidence 467778888777755554444445577788888888777777777788888888888888877655544 777788888
Q ss_pred EEcccCcccccCCcc-ccCCCCCCEEEccCccCCccCCC-ccCc----------------------------------Cc
Q 006570 153 LNISSNFIYGEIPME-ITSLKNLKSIVLADNLLNGSVPD-LQRL----------------------------------VL 196 (640)
Q Consensus 153 L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~-~~~l----------------------------------~~ 196 (640)
|+|++|.+++..|.. +.++++|++|+|++|++++..+. +..+ ++
T Consensus 134 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~ 213 (455)
T 3v47_A 134 LVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTS 213 (455)
T ss_dssp EECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCE
T ss_pred EECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccce
Confidence 888888887666665 67777888888888777776553 3222 34
Q ss_pred ---------------------------------------------------------------CCeeEccCCCCCCCCCC
Q 006570 197 ---------------------------------------------------------------LEELNLGGNDFGPKFPS 213 (640)
Q Consensus 197 ---------------------------------------------------------------L~~L~L~~N~l~~~~~~ 213 (640)
|++|+|++|++++..|.
T Consensus 214 L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 293 (455)
T 3v47_A 214 ITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKS 293 (455)
T ss_dssp EEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTT
T ss_pred eeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchh
Confidence 44444444455444454
Q ss_pred c---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCC
Q 006570 214 L---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290 (640)
Q Consensus 214 ~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L 290 (640)
. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|
T Consensus 294 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 294 VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccc
Confidence 3 5789999999999999999999999999999999999998889999999999999999999999889999999999
Q ss_pred CEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 291 NFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 291 ~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++|++++|++++..+..+..+++|+.+++++|++++..|
T Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 374 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999998777788999999999999999998765
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-32 Score=286.41 Aligned_cols=177 Identities=19% Similarity=0.359 Sum_probs=144.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
..+|++.+.||+|+||.||+|+.. ++..||||+++... ....+++.+|++++++++||||+++++++.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------- 116 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT------- 116 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-------
Confidence 357899999999999999999854 46789999997542 223467999999999999999999999984
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.++++. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 117 -~~~~~~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~D 190 (373)
T 2qol_A 117 -KSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSD 190 (373)
T ss_dssp -SSSSCEEEEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECC
T ss_pred -eCCceEEEEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECc
Confidence 34568999999999999999974 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... + +.. +.++|||||||++|||++ |
T Consensus 191 fg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g 247 (373)
T 2qol_A 191 FGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247 (373)
T ss_dssp C----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCC
Confidence 999986543211 1 234 889999999999999987 6
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=273.81 Aligned_cols=177 Identities=18% Similarity=0.287 Sum_probs=150.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-------- 81 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-------- 81 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE--------
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee--------
Confidence 35688899999999999999994 468999999986543322 367899999999999999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 82 EDDCYYLVMEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eCCeEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeC
Confidence 45668999999999999999975 3468999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC---------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT---------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~---------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||+||.
T Consensus 156 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~ 209 (294)
T 4eqm_A 156 GIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209 (294)
T ss_dssp SSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred CCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 99976532210 0 333 88999999999999999984
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-32 Score=290.23 Aligned_cols=185 Identities=15% Similarity=0.206 Sum_probs=156.2
Q ss_pred HHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 443 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
+++.....++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++..++||||+++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~- 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ- 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE-
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe-
Confidence 445555678899999999999999999996 468999999997532 223355889999999999999999999885
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
+....|+||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 132 -------~~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 132 -------DENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp -------CSSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTS
T ss_pred -------eCCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCC
Confidence 456789999999999999999752 3468999999999999999999999 7999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC---------c--------c--------CC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNT---------L--------S--------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~---------~--------~--------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++....... . . .. +.++|||||||++|||++|.
T Consensus 200 ~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~ 267 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267 (412)
T ss_dssp CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSS
T ss_pred CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCC
Confidence 999999999976533211 0 1 23 88999999999999999984
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=278.87 Aligned_cols=179 Identities=20% Similarity=0.316 Sum_probs=149.7
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 84 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG----- 84 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH-----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----
Confidence 5678889999999999999984 358899999998654444578999999999999999999999986322
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 85 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 85 -RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp -HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred -CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccC
Confidence 23479999999999999999752 3458999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++||||||+++|||+||+
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 214 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214 (295)
T ss_dssp CSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcc
Confidence 99986533211 0 233 88999999999999999973
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=280.19 Aligned_cols=179 Identities=20% Similarity=0.288 Sum_probs=151.9
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
...++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+..|.+++..+ +||||+++++++.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~----- 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ----- 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE-----
Confidence 3457899999999999999999995 468999999997542 34456788899999877 9999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 89 ---~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 89 ---TKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp ---CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEE
T ss_pred ---eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEE
Confidence 45578999999999999999975 3458999999999999999999999 69999999999999999999999
Q ss_pred eCCCCCccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++...... +. +.. +.++|||||||++|||++|.
T Consensus 160 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 215 (345)
T 1xjd_A 160 ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215 (345)
T ss_dssp CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCC
Confidence 9999997642111 00 333 88999999999999999984
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=279.89 Aligned_cols=177 Identities=22% Similarity=0.294 Sum_probs=152.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC------ChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.+.|++.+.||+|+||.||+|+. .+|+.||+|+++..... ..+.+.+|++++++++||||+++++++.
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----- 85 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE----- 85 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE-----
Confidence 45788899999999999999995 46899999999764321 3578999999999999999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL---- 598 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---- 598 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 86 ---~~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 86 ---NRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp ---CSSEEEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSC
T ss_pred ---eCCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCcc
Confidence 44678999999999999999964 4569999999999999999999999 6999999999999998876
Q ss_pred ceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~ 215 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 215 (361)
T ss_dssp CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCC
Confidence 7999999999765432111 233 88999999999999999984
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=276.76 Aligned_cols=181 Identities=19% Similarity=0.258 Sum_probs=153.5
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|.+.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~ 82 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------TTR 82 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------TTC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC------CCc
Confidence 46888899999999999999954 58999999997543 34467888999999999999999999988631 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCCceEEeC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKLSG 604 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~D 604 (640)
..++||||+++|+|.+++........+++.+++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 689999999999999999865445559999999999999999999999 699999999999999 7888999999
Q ss_pred CCCCccccCCCCc------------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL------------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~------------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||+||.
T Consensus 160 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~ 220 (319)
T 4euu_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220 (319)
T ss_dssp CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred CCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999765432211 123 78999999999999999984
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=282.97 Aligned_cols=176 Identities=17% Similarity=0.254 Sum_probs=151.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+++++.++||||+++++++. .
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--------~ 86 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ--------D 86 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------e
Confidence 5688899999999999999995 45889999999753 2345578899999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG 160 (384)
T 4fr4_A 87 EEDMFMVVDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFN 160 (384)
T ss_dssp SSEEEEEECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccc
Confidence 4568999999999999999964 4568999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 161 ~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~ 214 (384)
T 4fr4_A 161 IAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214 (384)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred eeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCC
Confidence 99865322110 112 77999999999999999984
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-32 Score=285.20 Aligned_cols=177 Identities=18% Similarity=0.212 Sum_probs=149.6
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|+..+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~------- 123 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ------- 123 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-------
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-------
Confidence 457888999999999999999954 58899999998643 22335688999999887 8999999999875
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 124 -~~~~~~lV~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 124 -TESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp -CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECC
T ss_pred -ECCEEEEEEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEee
Confidence 45678999999999999999975 3468999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 197 FGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~ 250 (396)
T 4dc2_A 197 YGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250 (396)
T ss_dssp CTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 9999863211110 333 88999999999999999984
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=279.85 Aligned_cols=176 Identities=17% Similarity=0.242 Sum_probs=152.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+++++.++||||+++++++. .
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~ 112 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK--------D 112 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------c
Confidence 5688899999999999999995 46899999999753 2345578899999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 113 ~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg 186 (350)
T 1rdq_E 113 NSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccc
Confidence 4678999999999999999975 3458999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 187 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 235 (350)
T 1rdq_E 187 FAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235 (350)
T ss_dssp TCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCC
Confidence 99865433211 333 88999999999999999984
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=274.98 Aligned_cols=177 Identities=21% Similarity=0.353 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||+||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++. .+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~ 91 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH--------SE 91 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC--------CS
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc--------cC
Confidence 467888999999999999999988899999999975432 23467899999999999999999999884 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 165 (311)
T 3niz_A 92 RCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGL 165 (311)
T ss_dssp SCEEEEEECCSE-EHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEcCCCC-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcC
Confidence 568999999985 89888864 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++||||+||++|||++|.
T Consensus 166 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 217 (311)
T 3niz_A 166 ARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217 (311)
T ss_dssp CEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred ceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCC
Confidence 9765322110 2 33 88999999999999999984
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-32 Score=279.30 Aligned_cols=177 Identities=19% Similarity=0.358 Sum_probs=149.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|.+.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|++++++++||||+++++++.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------- 120 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT------- 120 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------
Confidence 356788899999999999999963 34569999997542 223467999999999999999999999984
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.+...++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 121 -~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 121 -RGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp -GGGCCEEEEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred -eCCccEEEeeCCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECC
Confidence 34557999999999999999964 34568999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... + +.. +.++|||||||++|||++ |
T Consensus 195 fg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g 251 (325)
T 3kul_A 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG 251 (325)
T ss_dssp CSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999986543211 1 233 889999999999999998 6
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-32 Score=280.00 Aligned_cols=181 Identities=20% Similarity=0.369 Sum_probs=148.2
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS----VDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC----CCce
Confidence 457888999999999999999975 7899999997543 223456678899999999999999999864221 2345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-------CCCeeccCCCCCceeecCCCceEE
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-------APGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
.++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 7999999999999999974 34899999999999999999999820 119999999999999999999999
Q ss_pred eCCCCCccccCCCC----------c---------c-----CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT----------L---------S-----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~----------~---------~-----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++....... . + .. +.++|||||||++|||+||+
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~ 235 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCC
Confidence 99999965432111 0 1 12 66889999999999999983
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=274.56 Aligned_cols=175 Identities=21% Similarity=0.378 Sum_probs=146.1
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhc--CCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK--LRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||+||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~----~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH----SS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET----TE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC----CC
Confidence 46788899999999999999998 6899999998743 34566677777666 799999999999874332 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcc--------cCCCCCeeccCCCCCceeecCCCc
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH--------TGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
...++||||+++|+|.++++ ...+++..++.++.|++.||+||| + .+|+||||||+|||++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCC
Confidence 56899999999999999995 346899999999999999999999 6 79999999999999999999
Q ss_pred eEEeCCCCCccccCCCC------------c---------cC------C-CCccceehhhHHHHHHhhc
Q 006570 600 AKLSGYNIPLPSKVRNT------------L---------SF------H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~------------~---------~~------~-~~~~DvwS~Gvvl~elltG 639 (640)
+||+|||+++....... . +. . +.++|||||||++|||+||
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 99999999965422110 0 11 2 4689999999999999998
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=289.21 Aligned_cols=177 Identities=21% Similarity=0.390 Sum_probs=150.9
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+.. ++.||||+++... ..+.|.+|+++|++++||||+++++++.. ....
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~~~ 261 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGG 261 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC-------TTSC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc-------CCCc
Confidence 456788899999999999999985 7899999997543 45789999999999999999999999862 2335
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++|||||++|+|.++++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 262 ~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 262 LYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp EEEEEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 89999999999999999863 23457899999999999999999999 699999999999999999999999999997
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
........ ... +.++|||||||++|||+| |.
T Consensus 338 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~ 384 (450)
T 1k9a_A 338 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384 (450)
T ss_dssp ECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred cccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 54322111 334 889999999999999998 63
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=274.93 Aligned_cols=176 Identities=20% Similarity=0.308 Sum_probs=151.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
+.|+..+.||+|+||.||+|+. .+|+.||+|+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------ 84 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE------ 84 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE------
Confidence 4588889999999999999995 4689999999975432 13578999999999999999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----c
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----T 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~ 599 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 85 --~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 85 --NKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCC
T ss_pred --eCCEEEEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCC
Confidence 34568999999999999999964 4568999999999999999999998 7999999999999999887 8
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 157 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 214 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214 (326)
T ss_dssp EEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCc
Confidence 999999999765422110 233 88999999999999999984
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=276.41 Aligned_cols=177 Identities=15% Similarity=0.205 Sum_probs=151.6
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||.||+|+. .+++.||+|.++... ...+.+.+|+++++.++||||+++++++. ...
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~--------~~~ 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE--------SME 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE--------ETT
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEe--------cCC
Confidence 46788899999999999999995 468899999987432 23467889999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--CCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--ALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DfG 606 (640)
..++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 75 ELVMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEEeCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 68999999999999999964 33468999999999999999999999 69999999999999987 7899999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 150 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 200 (321)
T 1tki_A 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200 (321)
T ss_dssp TCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS
T ss_pred CCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99876432211 233 88999999999999999984
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=279.58 Aligned_cols=176 Identities=19% Similarity=0.213 Sum_probs=149.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+. .+++.||+|+++..... ..+.+.+|++++.++ +||||+++++++.
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-------- 80 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-------- 80 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE--------
Confidence 5688889999999999999995 46889999999865322 235678899999988 8999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DF 154 (345)
T 3a8x_A 81 TESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDY 154 (345)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCG
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEec
Confidence 44678999999999999999975 3458999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||++|.
T Consensus 155 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 207 (345)
T 3a8x_A 155 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207 (345)
T ss_dssp GGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCC
Confidence 99985321110 0 233 88999999999999999984
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-32 Score=293.35 Aligned_cols=181 Identities=17% Similarity=0.312 Sum_probs=154.3
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++...++|+..+.||+|+||.||+|+..++..||||+++... ...++|.+|+++|++++||||+++++++.
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-------- 253 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-------- 253 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC--------
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe--------
Confidence 344556788899999999999999998888999999998543 35688999999999999999999999873
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++|||||++|+|.++++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 254 -~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DF 328 (454)
T 1qcf_A 254 -KEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADF 328 (454)
T ss_dssp -SSSCEEEECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECST
T ss_pred -CCccEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeC
Confidence 23479999999999999999742 12357899999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCC------C-----c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 606 NIPLPSKVRN------T-----L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 606 Gla~~~~~~~------~-----~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|+++...... . . ... +.++|||||||++|||+| |.
T Consensus 329 G~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~ 383 (454)
T 1qcf_A 329 GLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383 (454)
T ss_dssp TGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCC
Confidence 9998653211 0 0 233 889999999999999998 63
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=269.52 Aligned_cols=175 Identities=18% Similarity=0.364 Sum_probs=151.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++. .....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~~ 80 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL--------EQAPI 80 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------SSSSE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEe--------cCCce
Confidence 5677889999999999999998888999999998543 34578999999999999999999999884 34558
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp EEEEECCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEEeCCCCcHHHHHHh--cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccc
Confidence 999999999999999974 34568999999999999999999999 7999999999999999999999999999975
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... . ... +.++||||+|+++|||++ |
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g 204 (269)
T 4hcu_A 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 204 (269)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCC
Confidence 532110 1 234 889999999999999998 5
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=272.21 Aligned_cols=179 Identities=20% Similarity=0.344 Sum_probs=138.1
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~ 75 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH--------TE 75 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC--------CT
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE--------EC
Confidence 46788999999999999999984 468999999997543 234578899999999999999999999884 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccC---CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++||||++ |+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 76 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 151 (317)
T 2pmi_A 76 NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGD 151 (317)
T ss_dssp TEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECC
T ss_pred CeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECc
Confidence 57899999998 59999986532 23458999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... + + .. +.++|||||||++|||+||.
T Consensus 152 fg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 206 (317)
T 2pmi_A 152 FGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206 (317)
T ss_dssp CSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999976532110 0 2 23 88999999999999999984
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=278.77 Aligned_cols=178 Identities=17% Similarity=0.211 Sum_probs=151.7
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||||+++++++.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~------ 91 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 91 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE------
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE------
Confidence 3467889999999999999999965 4789999999754 234557788999999988 8999999999874
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.....|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 92 --~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 92 --TMDRLYFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEEC
T ss_pred --cCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEE
Confidence 44678999999999999999975 3458999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... . +.. +.++|||||||++|||++|.
T Consensus 164 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 218 (353)
T 2i0e_A 164 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218 (353)
T ss_dssp CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred eCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCC
Confidence 9999986321110 0 233 88999999999999999984
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=277.20 Aligned_cols=177 Identities=19% Similarity=0.286 Sum_probs=142.7
Q ss_pred hcCCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
.++|+..+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 91 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ---- 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE----
Confidence 35688899999999999999985 468999999997542 223456889999999999999999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 92 ----~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 92 ----TGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ----CSSCEEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEE
T ss_pred ----cCCEEEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEE
Confidence 34568999999999999999975 3458899999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++...... +. +.. +.++|||||||++|||++|.
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 218 (327)
T 3a62_A 162 LTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218 (327)
T ss_dssp ECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCC
Confidence 99999987542211 00 233 88999999999999999984
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=277.59 Aligned_cols=177 Identities=23% Similarity=0.366 Sum_probs=148.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++. .+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~--------~~ 77 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR--------EG 77 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE--------CS
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe--------cC
Confidence 367888999999999999999954 789999999975432 23467899999999999999999999885 45
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 78 NIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp SEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeec
Confidence 668999999999999999963 4568999999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCC----------Cc---------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL---------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~---------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... +. +. . +.++|||||||++|||++|.
T Consensus 152 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 205 (323)
T 3tki_A 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205 (323)
T ss_dssp CEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred cceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCC
Confidence 97542111 00 22 2 67899999999999999984
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=280.88 Aligned_cols=178 Identities=16% Similarity=0.237 Sum_probs=152.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..........+.+|++++++++||||+++++++. ...
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~~~ 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE--------DKY 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE--------CSS
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE--------eCC
Confidence 45788999999999999999995 468899999997654444567899999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--CCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--ALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DfG 606 (640)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||
T Consensus 122 ~~~lv~E~~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 122 EMVLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEEEEECCCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEEEEcCCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecc
Confidence 68999999999999999964 33468999999999999999999999 69999999999999974 4789999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||+||.
T Consensus 197 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 247 (387)
T 1kob_A 197 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247 (387)
T ss_dssp TCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred cceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCC
Confidence 99876432211 233 88999999999999999984
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=275.89 Aligned_cols=181 Identities=17% Similarity=0.259 Sum_probs=149.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+++.||||+++...... .+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---- 86 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---- 86 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET----
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC----
Confidence 35788899999999999999994 678999999997643322 3578899999999999999999998864321
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.++++. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCC
T ss_pred CCcccEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeec
Confidence 23346999999999999999975 3468999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC-----------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-----------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-----------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||+||.
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~ 216 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216 (311)
T ss_dssp SCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 99976532210 0 334 88999999999999999984
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=292.45 Aligned_cols=178 Identities=17% Similarity=0.340 Sum_probs=152.8
Q ss_pred HhcCCCCCCccccCCccceEEEEeCC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...+|+..+.||+|+||.||+|++.. +..||||+++... ...++|.+|+++|++++||||++++++|. ..
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~--------~~ 288 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--------RE 288 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEe--------cC
Confidence 34567888999999999999999654 8899999997543 34688999999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|||||++|+|.++++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 289 ~~~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 289 PPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp SSCEEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred CcEEEEEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeeccc
Confidence 5589999999999999999753 34568999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++........ ... +.++|||||||++|||+| |
T Consensus 365 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g 416 (495)
T 1opk_A 365 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 416 (495)
T ss_dssp EECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred ceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCC
Confidence 9865322110 233 889999999999999998 5
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=277.18 Aligned_cols=225 Identities=18% Similarity=0.100 Sum_probs=206.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 68899999999999888899999999999999999998888889999999999999999999666668999999999999
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
++|.|+..++. |.++++|++|+|++|+..+.++. .+++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc
Confidence 99999998886 99999999999999655444443 2789999999999998 455 58899999999999999999
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.+++++|.+.-
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 999999999999999999999999999999999999999999999998888889999999999999998753
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-32 Score=282.95 Aligned_cols=189 Identities=21% Similarity=0.339 Sum_probs=156.8
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCccccee
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSI 512 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l 512 (640)
++..+++...++|.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 45667777788999999999999999999973 3467899999975432 2235799999999999 79999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-----------------------------------------
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK----------------------------------------- 551 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----------------------------------------- 551 (640)
++++.. .+...++||||+++|+|.++++....
T Consensus 92 ~~~~~~-------~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
T 3vhe_A 92 LGACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164 (359)
T ss_dssp EEEECS-------TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred eeeeec-------CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence 999852 23457999999999999999975321
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 552 ----------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 552 ----------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLAR 241 (359)
T ss_dssp -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEecccee
Confidence 1228899999999999999999999 699999999999999999999999999998
Q ss_pred cccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
........ +.. +.++|||||||++|||+| |
T Consensus 242 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 292 (359)
T 3vhe_A 242 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 292 (359)
T ss_dssp CTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred eecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcC
Confidence 65322110 233 889999999999999998 6
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-32 Score=287.00 Aligned_cols=177 Identities=18% Similarity=0.327 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|...+.||+|+||.||+|+.. +++.||||.++.... ...+++.+|+++|++++||||+++++++. ..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~~ 184 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT--------QK 184 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC--------SS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--------cC
Confidence 456788899999999999999965 689999999875322 22356889999999999999999999984 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.++++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 185 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 185 QPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp SSCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred CCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 5589999999999999999752 3458999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++....... . ... +.++|||||||++|||+| |
T Consensus 260 s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g 312 (377)
T 3cbl_A 260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG 312 (377)
T ss_dssp CEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred ceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 975432110 0 233 889999999999999998 5
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=271.14 Aligned_cols=178 Identities=17% Similarity=0.268 Sum_probs=145.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--------------------------CChHHHHHHHHHHh
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--------------------------HLPQSLMQHVELLS 502 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 502 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788899999999999999984 5688999999975321 11356899999999
Q ss_pred cCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCe
Q 006570 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGI 582 (640)
Q Consensus 503 ~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 582 (640)
+++||||+++++++... .....++||||+++|+|.+++. ...+++.++..++.|++.||+|||+ .+|
T Consensus 92 ~l~h~~iv~~~~~~~~~------~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP------NEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECS------SSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hCCCCCCCeEEEEEEcC------CCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCe
Confidence 99999999999998621 2456899999999999988763 3468999999999999999999999 699
Q ss_pred eccCCCCCceeecCCCceEEeCCCCCccccCCCC--------c---------c-C--C-CCccceehhhHHHHHHhhcC
Q 006570 583 FGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT--------L---------S-F--H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 583 iHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~--------~---------~-~--~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||||||+||+++.++.+||+|||+++....... . + . . +.++|||||||++|||++|.
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 237 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSS
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCC
Confidence 9999999999999999999999999976543211 0 1 1 1 56789999999999999984
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=277.16 Aligned_cols=178 Identities=19% Similarity=0.308 Sum_probs=151.4
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-------- 98 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-------- 98 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 346789999999999999999995 4689999999975432 22367889999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl 602 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 99 EESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp CSSEEEEEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred eCCEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEE
Confidence 44568999999999999999964 4568999999999999999999999 699999999999999865 45999
Q ss_pred eCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 173 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 227 (362)
T 2bdw_A 173 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 227 (362)
T ss_dssp CCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCC
Confidence 999999766432211 223 88999999999999999984
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=275.87 Aligned_cols=176 Identities=19% Similarity=0.319 Sum_probs=150.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-------- 79 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-------- 79 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 35788899999999999999995 67899999999743 2334568999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+ +|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+||
T Consensus 80 ~~~~~~lv~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 80 TPTDIVMVIEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp CSSEEEEEECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCS
T ss_pred eCCEEEEEEECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEe
Confidence 345689999999 6899999865 3468999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +.. +.++|||||||++|||++|.
T Consensus 153 G~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 205 (336)
T 3h4j_B 153 GLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205 (336)
T ss_dssp SCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCC
Confidence 999765432210 222 67899999999999999984
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=267.47 Aligned_cols=177 Identities=22% Similarity=0.328 Sum_probs=152.8
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+..++..||+|+++... ...+++.+|++++++++||||+++++++. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~ 77 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCS--------KEYP 77 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SSSS
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEc--------cCCc
Confidence 35688889999999999999998888899999997543 34578999999999999999999999884 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 152 (268)
T 3sxs_A 78 IYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152 (268)
T ss_dssp EEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred eEEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccce
Confidence 89999999999999999752 3458999999999999999999999 799999999999999999999999999997
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
....... . +.. +.++||||||+++|||+| |.
T Consensus 153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 203 (268)
T 3sxs_A 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203 (268)
T ss_dssp ECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTC
T ss_pred ecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCC
Confidence 6533211 1 224 889999999999999998 63
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=268.44 Aligned_cols=227 Identities=19% Similarity=0.143 Sum_probs=207.8
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcC--CCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWG--PLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
..++.|+|++|.+....+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.+. .+|..+.++++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 589999999999986666678999999999999999963 34677888999999999999999 688889999999999
Q ss_pred EccCccCCccCC--CccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccc-cCCccccCCCCccEEEccCCc
Q 006570 178 VLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRS-EIPSGLKNFDQLKQFDISSNN 251 (640)
Q Consensus 178 ~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 251 (640)
++++|++++.++ .+..+++|++|++++|++++..+.. +++|+.|++++|.+++ .+|..+..+++|+.|+|++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999999876 4999999999999999998877764 6899999999999987 689999999999999999999
Q ss_pred ccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCC-CCCceeeeccccccCc
Q 006570 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN-SLNRTVVSTWNCLSGV 327 (640)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~-~~l~~l~l~~N~l~~~ 327 (640)
+++..|..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|..+..+ ++|+.+++++|.+++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 999889999999999999999999999877789999999999999999999999999988 4999999999999874
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=279.23 Aligned_cols=179 Identities=14% Similarity=0.261 Sum_probs=150.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-----CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
+.|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~------- 96 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS------- 96 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-------
Confidence 5688899999999999999985 568999999996431 224678999999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---e
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---A 600 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~ 600 (640)
.....|+|||||++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +
T Consensus 97 -~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 97 -SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp -ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCE
T ss_pred -eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcE
Confidence 3456899999999999998886422 34468999999999999999999999 69999999999999987654 9
Q ss_pred EEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++........ +.. +.++|||||||++|||++|+
T Consensus 173 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 230 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC 230 (351)
T ss_dssp EECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred EEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCC
Confidence 99999999765432210 233 89999999999999999984
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=270.35 Aligned_cols=176 Identities=18% Similarity=0.365 Sum_probs=149.8
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||+||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++. ...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH--------TKK 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE--------CSS
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc--------cCC
Confidence 4688889999999999999998789999999996542 233478899999999999999999999985 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred eEEEEEEecCC-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 68999999985 99999874 23568999999999999999999999 69999999999999999999999999998
Q ss_pred ccccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... + + + .. +.++|||||||++|||+||.
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 198 (288)
T 1ob3_A 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198 (288)
T ss_dssp HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 6543211 0 0 2 23 88999999999999999984
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-32 Score=292.17 Aligned_cols=178 Identities=21% Similarity=0.377 Sum_probs=150.3
Q ss_pred HHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...++|+..+.||+|+||.||+|+..++..||||+++... ...++|.+|+++|++++||||+++++++. .
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---------~ 250 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------E 250 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------S
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc---------C
Confidence 3456788889999999999999998878889999998543 34678999999999999999999999874 1
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.++++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 251 ~~~~iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~ 326 (452)
T 1fmk_A 251 EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGL 326 (452)
T ss_dssp SSCEEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred CceEEEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCcc
Confidence 3479999999999999999642 23458999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++....... . ... +.++|||||||++|||+| |
T Consensus 327 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g 378 (452)
T 1fmk_A 327 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378 (452)
T ss_dssp TC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred ceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCC
Confidence 986542211 0 234 889999999999999999 5
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=268.02 Aligned_cols=176 Identities=18% Similarity=0.331 Sum_probs=148.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||+||+|+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++. .+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 73 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH--------SD 73 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------ET
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE--------eC
Confidence 4688889999999999999995 4689999999975432 23467889999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ ++.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 74 KKLTLVFEFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp TEEEEEEECCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 568999999976 67666653 24569999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ ... +.++|||||||++|||+||.
T Consensus 148 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~ 199 (292)
T 3o0g_A 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_dssp CEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTS
T ss_pred ceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcC
Confidence 9765322110 222 88999999999999999873
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=278.27 Aligned_cols=172 Identities=20% Similarity=0.301 Sum_probs=142.6
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
.+.||+|+||.||+|+. .+|+.||+|+++.......+++.+|++++++++||||+++++++. .....++||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~--------~~~~~~lv~ 165 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE--------SKNDIVLVM 165 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------CSSEEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE--------ECCEEEEEE
Confidence 56799999999999985 568999999998654445678999999999999999999999985 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee--cCCCceEEeCCCCCcccc
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL--DKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl--~~~~~~kl~DfGla~~~~ 612 (640)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 166 E~~~~~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIID--ESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 99999999999864 23458999999999999999999999 699999999999999 567899999999998654
Q ss_pred CCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... ... +.++|||||||++|||++|.
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 285 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSS
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCC
Confidence 32211 233 78999999999999999984
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=290.20 Aligned_cols=179 Identities=20% Similarity=0.241 Sum_probs=153.6
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++|++++||||+++++++.
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-------- 254 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-------- 254 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe--------
Confidence 45688889999999999999995 46999999999753 2344577899999999999999999999875
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+....|+||||+++|+|.+++... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 255 ~~~~l~lVmEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 255 TKDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEec
Confidence 446789999999999999999752 23458999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 331 Gla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~ 382 (576)
T 2acx_A 331 GLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382 (576)
T ss_dssp TTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSS
T ss_pred ccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC
Confidence 999865432211 233 89999999999999999984
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-30 Score=276.03 Aligned_cols=225 Identities=18% Similarity=0.099 Sum_probs=206.8
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999988999999999999999999999888899999999999999999999777777999999999999
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
++|+|+..++. |.++++|++|+|++|+..+.++. .+++|+.|+|++|++++ +| .+..+++|+.|+|++|+|++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcc
Confidence 99999988886 99999999999999654444443 27899999999999985 44 58899999999999999999
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.+++++|.+.-
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 999999999999999999999999999999999999999999999998888889999999999999998754
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=279.22 Aligned_cols=177 Identities=20% Similarity=0.258 Sum_probs=141.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHH-HhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVEL-LSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|+..+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|..+ ++.++||||+++++++.
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~------- 109 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ------- 109 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE-------
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-------
Confidence 357888999999999999999954 588999999976432 233456677776 57789999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 110 -~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 110 -TADKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp -CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECC
T ss_pred -eCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEee
Confidence 45678999999999999999975 3458899999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... + +.. +.++|||||||++|||++|.
T Consensus 183 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 236 (373)
T 2r5t_A 183 FGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236 (373)
T ss_dssp CCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCC
Confidence 999975321110 0 233 88999999999999999984
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-31 Score=264.74 Aligned_cols=177 Identities=17% Similarity=0.243 Sum_probs=153.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++. .+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 79 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE--------DNT 79 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------CSS
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe--------cCC
Confidence 356888999999999999999954 57799999998766666789999999999999999999999985 445
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 68999999999999999875 3458999999999999999999999 699999999999999 78899999999
Q ss_pred CCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... ... +.++||||||+++|||++|.
T Consensus 154 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (277)
T 3f3z_A 154 GLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGY 204 (277)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSS
T ss_pred ccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCC
Confidence 999765432211 233 88999999999999999984
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=268.69 Aligned_cols=177 Identities=16% Similarity=0.301 Sum_probs=149.8
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+..++..||||+++... ...+++.+|++++++++||||+++++++. ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~ 93 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT--------KQRP 93 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------SSSS
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEe--------cCCC
Confidence 45788889999999999999998888899999998543 34578999999999999999999999884 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred eEEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccc
Confidence 89999999999999999752 3458999999999999999999999 799999999999999999999999999997
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
....... + ... +.++||||||+++|||+| |.
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~ 219 (283)
T 3gen_A 169 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219 (283)
T ss_dssp GBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTC
T ss_pred cccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 5532110 1 233 889999999999999998 63
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-30 Score=278.75 Aligned_cols=260 Identities=19% Similarity=0.132 Sum_probs=194.9
Q ss_pred cccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 67 SLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 67 ~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
|..|.|+. ..++.|+|++|.+++.. +..+...+.|+.|+|++|.+.+..|..|.++++|++|+|++|.
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLN-QDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceEC-HhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 34688863 25788999999885433 2234456899999999999998889999999999999999999
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
+++..+..|.++++|++|+|++|.+.+..|..|.++++|+.|+|++|.+++..+. |.++++|++|+|++|++++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 9776666789999999999999999988898999999999999999999998876 899999999999999998766542
Q ss_pred ---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC------------------------ccccCCCCCc
Q 006570 215 ---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ------------------------SFLFSLPSIL 267 (640)
Q Consensus 215 ---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------------------------~~~~~l~~L~ 267 (640)
+++|+.|+|++|.+++..+..|.++++|+.|++++|.+.+.+| ..+..+++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 6788888888888887777777777666666666554444433 3455555566
Q ss_pred EEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 268 YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 268 ~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++.
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCcee
Confidence 666666655555555555555666666666666555555555566666666666655543
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-31 Score=283.07 Aligned_cols=178 Identities=16% Similarity=0.253 Sum_probs=150.2
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------- 80 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-------- 80 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE--------
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE--------
Confidence 456788999999999999999984 5789999999975432 23467899999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec---CCCceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl 602 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++ +++.+||
T Consensus 81 ~~~~~~lv~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL 154 (444)
T 3soa_A 81 EEGHHYLIFDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKL 154 (444)
T ss_dssp CSSEEEEEECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEE
T ss_pred ECCEEEEEEEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEE
Confidence 45678999999999999999975 3568999999999999999999999 7999999999999998 4588999
Q ss_pred eCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ +.. +.++||||+||++|||++|.
T Consensus 155 ~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~ 210 (444)
T 3soa_A 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGY 210 (444)
T ss_dssp CCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCC
Confidence 999999765432211 233 88999999999999999984
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=275.68 Aligned_cols=176 Identities=18% Similarity=0.225 Sum_probs=146.3
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||+||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++. ...
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~~~ 89 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVIL--------TPT 89 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEE--------CSS
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEe--------eCC
Confidence 357888999999999999999954 78999999997543 33477899999999999999999999986 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc--eEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--AKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--~kl~DfG 606 (640)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||
T Consensus 90 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 90 HLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 68999999999999999965 3458999999999999999999998 79999999999999988765 9999999
Q ss_pred CCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 164 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 215 (361)
T 3uc3_A 164 YSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA 215 (361)
T ss_dssp CC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCC
Confidence 99743221110 222 44589999999999999984
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-31 Score=275.31 Aligned_cols=176 Identities=18% Similarity=0.280 Sum_probs=139.5
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..+.|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++. ..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~ 120 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE--------TP 120 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE--------CS
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe--------cC
Confidence 3467888999999999999999964 57899999997543 3467889999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|
T Consensus 121 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 121 TEISLVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp SEEEEEECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred CeEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEcc
Confidence 568999999999999999964 4568999999999999999999999 69999999999999975 89999999
Q ss_pred CCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 195 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 247 (349)
T 2w4o_A 195 FGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF 247 (349)
T ss_dssp CC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCC
Confidence 9999865432110 334 88999999999999999984
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=283.34 Aligned_cols=176 Identities=22% Similarity=0.345 Sum_probs=152.0
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++. .
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~--------~ 87 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS--------T 87 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------E
Confidence 56888899999999999999954 79999999997532 234578999999999999999999999885 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 88 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG 161 (476)
T 2y94_A 88 PSDIFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFG 161 (476)
T ss_dssp SSEEEEEEECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEecc
Confidence 4568999999999999999964 4568999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +. . +.++||||+||++|||++|.
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 213 (476)
T 2y94_A 162 LSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGT 213 (476)
T ss_dssp SCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSS
T ss_pred chhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCC
Confidence 99865432110 22 2 67899999999999999984
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=278.14 Aligned_cols=184 Identities=20% Similarity=0.344 Sum_probs=153.4
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
+....++|+..+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~- 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA- 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-
Confidence 3445678999999999999999999963 347899999975432 23467899999999999999999999984
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCC---------------------CCCCCHHHHHHHHHHHHHHhhhcccC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK---------------------KDMLKWPQRMAIIIGATRGVQFLHTG 577 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~ 577 (640)
.+...++||||+++|+|.++++.... ...+++.+++.++.|+++||+|||+
T Consensus 121 -------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~- 192 (343)
T 1luf_A 121 -------VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE- 192 (343)
T ss_dssp -------SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred -------cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 34568999999999999999975321 2568999999999999999999999
Q ss_pred CCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHh
Q 006570 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVIT 637 (640)
Q Consensus 578 ~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ell 637 (640)
.+|+||||||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||+
T Consensus 193 --~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (343)
T 1luf_A 193 --RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270 (343)
T ss_dssp --TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred --CCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHH
Confidence 6999999999999999999999999999875422110 0 233 88999999999999999
Q ss_pred h-cC
Q 006570 638 L-CC 640 (640)
Q Consensus 638 t-G~ 640 (640)
| |.
T Consensus 271 t~g~ 274 (343)
T 1luf_A 271 SYGL 274 (343)
T ss_dssp TTTC
T ss_pred hcCC
Confidence 8 63
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=270.08 Aligned_cols=176 Identities=23% Similarity=0.370 Sum_probs=150.4
Q ss_pred cCCCCCCccccCCccceEEEEeC-CC-------cEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DG-------SRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++|...+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 82 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV----- 82 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC-----
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----
Confidence 56788899999999999999853 23 479999997666566788999999999999999999999985
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--- 599 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--- 599 (640)
.+...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 83 ---~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 154 (289)
T 4fvq_A 83 ---CGDENILVQEFVKFGSLDTYLKK--NKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKT 154 (289)
T ss_dssp ---CTTCCEEEEECCTTCBHHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGG
T ss_pred ---eCCCCEEEEECCCCCCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccc
Confidence 34457999999999999999975 23348999999999999999999999 69999999999999998887
Q ss_pred -----eEEeCCCCCccccCCCC-------c------c-CC-CCccceehhhHHHHHHhhc
Q 006570 600 -----AKLSGYNIPLPSKVRNT-------L------S-FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 600 -----~kl~DfGla~~~~~~~~-------~------~-~~-~~~~DvwS~Gvvl~elltG 639 (640)
+||+|||++........ . + .. +.++|||||||++|||++|
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g 214 (289)
T 4fvq_A 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214 (289)
T ss_dssp TBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred cccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcC
Confidence 99999999976533211 0 2 33 8899999999999999996
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=266.04 Aligned_cols=184 Identities=27% Similarity=0.391 Sum_probs=148.9
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-----CCChHHHHHHHHHHhcCC---CcccceeeeEEEec
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLR---HRHLVSILGHCILT 519 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~ 519 (640)
..++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999994 568999999997432 122457778888877764 99999999998642
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
.. ......++||||++ |+|.+++... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 87 ~~---~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RT---DREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CS---SSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred CC---CCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 21 12235799999997 5999999752 23448999999999999999999999 69999999999999999999
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 159 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~ 216 (308)
T 3g33_A 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216 (308)
T ss_dssp EEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSS
T ss_pred EEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCC
Confidence 999999999865432211 334 88999999999999999984
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=269.22 Aligned_cols=179 Identities=20% Similarity=0.373 Sum_probs=149.2
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
..|+..+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 95 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 95 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 4477789999999999999983 358899999997543 33457899999999999999999999998631
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 96 -~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 96 -GGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp ---CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECC
T ss_pred -CCceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECc
Confidence 234589999999999999999642 3458999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++||||||+++|||+||+
T Consensus 170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (302)
T 4e5w_A 170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 226 (302)
T ss_dssp CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHcc
Confidence 9999765432210 223 77899999999999999985
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-31 Score=270.64 Aligned_cols=177 Identities=19% Similarity=0.336 Sum_probs=144.6
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++. +..
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----------~~~ 74 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL----------NPV 74 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT----------TTT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc----------CCc
Confidence 46777899999999999999975 789999998643 34578999999999999999999999763 126
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-eEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-AKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-~kl~DfGla~ 609 (640)
++||||+++|+|.++++.......+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154 (307)
T ss_dssp EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence 999999999999999986443345789999999999999999999854458999999999999998876 7999999997
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++|||||||++|||+||.
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 200 (307)
T 2eva_A 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 65322111 334 88999999999999999984
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=284.25 Aligned_cols=179 Identities=18% Similarity=0.320 Sum_probs=141.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+++.||||++..... ...+++.+|+++|++++||||+++++++.... .+..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---~~~~ 129 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD---VEKF 129 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC---TTTC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC---cccC
Confidence 6789999999999999999984 4689999999965322 23467889999999999999999999985321 1234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+||||+. |+|.+++.. ...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence 56899999985 699999964 4569999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC-----------------------------------C--c--------cCC-CCccceehhhHHHHHHhhc
Q 006570 608 PLPSKVRN-----------------------------------T--L--------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 608 a~~~~~~~-----------------------------------~--~--------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++...... + + ... +.++|||||||++|||+||
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 98653110 0 0 233 8899999999999999984
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=287.97 Aligned_cols=178 Identities=17% Similarity=0.209 Sum_probs=142.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+++++.++||||+++++++.
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------- 218 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-------- 218 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE--------
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe--------
Confidence 46788899999999999999994 56899999999753 2233466788999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ .+|+||||||+|||++.++.+||+||
T Consensus 219 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 219 THDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp ETTEEEEEECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCC
T ss_pred eCCEEEEEEeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccC
Confidence 34568999999999999999975 34689999999999999999999962 48999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 294 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 346 (446)
T 4ejn_A 294 GLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346 (446)
T ss_dssp CCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCC
Confidence 999764221110 334 89999999999999999984
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=278.20 Aligned_cols=187 Identities=17% Similarity=0.216 Sum_probs=155.1
Q ss_pred CCCHHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-----Ccccceee
Q 006570 440 GFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----HRHLVSIL 513 (640)
Q Consensus 440 ~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~ 513 (640)
.+++.+.....++|.+.+.||+|+||+||+|+. .+++.||||+++... ...+.+..|+++++.++ ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 344444445668899999999999999999995 568899999997422 23466788999999986 99999999
Q ss_pred eEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCcee
Q 006570 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593 (640)
Q Consensus 514 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 593 (640)
+++.. ....++||||+ +|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||
T Consensus 103 ~~~~~--------~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 169 (360)
T 3llt_A 103 GKFMY--------YDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENIL 169 (360)
T ss_dssp EEEEE--------TTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred ceeeE--------CCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEE
Confidence 98862 35689999999 88999999762 33458999999999999999999999 79999999999999
Q ss_pred ecC-------------------------CCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHH
Q 006570 594 LDK-------------------------ALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILII 633 (640)
Q Consensus 594 l~~-------------------------~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl 633 (640)
++. ++.+||+|||+++........ +.. +.++|||||||++
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp ESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred EccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 976 789999999999865432211 334 8999999999999
Q ss_pred HHHhhcC
Q 006570 634 CVITLCC 640 (640)
Q Consensus 634 ~elltG~ 640 (640)
|||+||.
T Consensus 250 ~ell~g~ 256 (360)
T 3llt_A 250 AELYTGS 256 (360)
T ss_dssp HHHHHSS
T ss_pred HHHHHCC
Confidence 9999984
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=277.47 Aligned_cols=179 Identities=19% Similarity=0.363 Sum_probs=150.1
Q ss_pred hcCCCCCCccccCCccceEEEEeC--------CCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|.+.+.||+|+||.||+|+.. ++..||||+++.... ...+++.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec--
Confidence 467888899999999999999842 245799999975432 2336789999999999 9999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .+|+|||
T Consensus 146 ------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 216 (382)
T 3tt0_A 146 ------QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRD 216 (382)
T ss_dssp ------SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred ------cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCC
Confidence 34558999999999999999976321 2459999999999999999999999 6999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+|||+++++.+||+|||+++........ +.. +.++|||||||++|||+| |
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g 290 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999865432110 333 889999999999999998 6
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=272.77 Aligned_cols=186 Identities=15% Similarity=0.270 Sum_probs=140.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeCC-Cc---EEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTD-GS---RVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
..++|+..+.||+|+||.||+|+... +. .||||+++... ....+++.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 44678899999999999999999543 32 79999997542 23357899999999999999999999998632111
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccC---CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
......++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.
T Consensus 101 --~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 101 --GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSC
T ss_pred --cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCC
Confidence 11123489999999999999996432 22368999999999999999999999 69999999999999999999
Q ss_pred eEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 600 AKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+||+|||+++....... + +.. +.++|||||||++|||++ |
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g 236 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRG 236 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCC
Confidence 99999999976532211 0 233 889999999999999999 5
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=269.25 Aligned_cols=177 Identities=19% Similarity=0.371 Sum_probs=151.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
..++|+..+.||+|+||.||+|+..++..||||.++... ...+.+.+|++++++++||||+++++++. .+
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------~~ 80 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT---------QE 80 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------SS
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc---------CC
Confidence 346788899999999999999998888899999997543 35678999999999999999999999873 23
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 81 PIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp SCEEEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CcEEEEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 479999999999999999642 12358999999999999999999999 69999999999999999999999999999
Q ss_pred ccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 609 LPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 609 ~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+....... . +.. +.++||||||+++|||++ |
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 207 (279)
T 1qpc_A 157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207 (279)
T ss_dssp EECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTT
T ss_pred ccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCC
Confidence 76543211 0 233 789999999999999998 5
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=285.55 Aligned_cols=179 Identities=20% Similarity=0.279 Sum_probs=152.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++. .
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~--------~ 256 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE--------T 256 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--------e
Confidence 5677888999999999999996 468999999997532 344578899999999999999999998875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....|+||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeec
Confidence 466899999999999999997532 24469999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||+||.
T Consensus 334 Gla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~ 386 (543)
T 3c4z_A 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386 (543)
T ss_dssp TTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCC
Confidence 99976532211 0 333 89999999999999999984
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=296.40 Aligned_cols=178 Identities=21% Similarity=0.382 Sum_probs=152.6
Q ss_pred HHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...++|++.+.||+|+||.||+|++.++..||||+++... ...++|.+|+++|++++||||+++++++. .
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~---------~ 333 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------E 333 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------S
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEe---------e
Confidence 3456788889999999999999998888889999998543 34678999999999999999999999874 1
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|||||++|+|.++++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 334 ~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~ 409 (535)
T 2h8h_A 334 EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGL 409 (535)
T ss_dssp SSCEEEECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred ccceEeeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEccccc
Confidence 3479999999999999999642 23458999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC------C-----c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRN------T-----L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~------~-----~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++...... . . ... +.++|||||||++|||+| |
T Consensus 410 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g 461 (535)
T 2h8h_A 410 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 461 (535)
T ss_dssp TTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTT
T ss_pred ceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 98654211 0 0 233 889999999999999999 5
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=271.71 Aligned_cols=174 Identities=17% Similarity=0.190 Sum_probs=148.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++. .+.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~--------~~~ 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGP--------CGK 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEE--------ETT
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEe--------cCC
Confidence 5688899999999999999994 678999999987543 235688999999999 9999999999885 245
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-----eEEe
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-----AKLS 603 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~ 603 (640)
..++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred ccEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 689999999 99999999752 4569999999999999999999999 69999999999999999887 9999
Q ss_pred CCCCCccccCCCC---------------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT---------------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~---------------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... . +.. +.++|||||||++|||++|.
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~ 214 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGS 214 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCC
Confidence 9999986432110 0 233 88999999999999999984
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=265.20 Aligned_cols=179 Identities=15% Similarity=0.242 Sum_probs=149.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||.||+|+. .++..||+|++.... ....+.+.+|++++++++||||+++++++. ...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~ 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE--------DYH 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------CSS
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee--------cCC
Confidence 4578889999999999999995 568899999997654 335688999999999999999999999985 345
Q ss_pred eEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeC
Q 006570 529 TVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSG 604 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~D 604 (640)
..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 689999999999999998642 124568999999999999999999999 699999999999999 4568899999
Q ss_pred CCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||++|+
T Consensus 171 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~ 222 (285)
T 3is5_A 171 FGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGC 222 (285)
T ss_dssp CCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSS
T ss_pred eecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCC
Confidence 9999765432211 233 88999999999999999985
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=273.44 Aligned_cols=176 Identities=23% Similarity=0.316 Sum_probs=149.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
+.|+..+.||+|+||+||+|+. .+++.||||++...... ..+++.+|++++++++||||+++++++. .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~ 125 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL--------R 125 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------E
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------E
Confidence 3477889999999999999994 67899999999754322 2357889999999999999999999986 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||++ |+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 126 ~~~~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 126 EHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred CCeEEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeecc
Confidence 356899999997 6898888642 3568999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ ... +.++|||||||++|||+||.
T Consensus 200 ~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~ 250 (348)
T 1u5q_A 200 SASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250 (348)
T ss_dssp TCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99865432221 123 88999999999999999984
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=273.35 Aligned_cols=176 Identities=22% Similarity=0.354 Sum_probs=146.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE----EEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR----VSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||+||+|+. .+++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 85 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------- 85 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------
Confidence 4677889999999999999995 34543 7888775432 233467789999999999999999999873
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 86 --~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 86 --GSSLQLVTQYLPLGSLLDHVRQ--HRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp --BSSEEEEEECCTTCBSHHHHHS--SGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECS
T ss_pred --CCccEEEEEeCCCCCHHHHHHH--ccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECC
Confidence 2348999999999999999974 23468999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++........ +.. +.++|||||||++|||+| |.
T Consensus 159 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~ 215 (325)
T 3kex_A 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 215 (325)
T ss_dssp CSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCC
Confidence 9999875332211 234 889999999999999999 63
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-31 Score=279.04 Aligned_cols=178 Identities=17% Similarity=0.269 Sum_probs=150.8
Q ss_pred cCCCCCCccccC--CccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEG--SQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|++.+.||+| +||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------- 96 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-------- 96 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE--------
Confidence 568889999999 99999999954 689999999976432 23467888999999999999999999986
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++|||||++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 97 ADNELWVVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCG
T ss_pred ECCEEEEEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccc
Confidence 345689999999999999999752 23568999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCC------------------Cc------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRN------------------TL------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~------------------~~------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|.+....... .. + .. +.++|||||||++|||++|.
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~ 234 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 234 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCC
Confidence 9875431110 00 2 34 88999999999999999984
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=266.63 Aligned_cols=176 Identities=19% Similarity=0.381 Sum_probs=147.6
Q ss_pred cCCCC-CCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDP-TNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~-~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.|.+ .+.||+|+||.||+|+ ..+++.||||++........+.+.+|++++.++ +||||+++++++. ..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~--------~~ 83 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE--------EE 83 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------ET
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe--------eC
Confidence 45766 4789999999999999 457899999999876556678899999999985 7999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---eEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---AKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~D 604 (640)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 84 DRFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp TEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEE
Confidence 568999999999999999975 3458999999999999999999999 69999999999999998766 99999
Q ss_pred CCCCccccCCC---------------Cc---------c-----CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRN---------------TL---------S-----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~---------------~~---------~-----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++...... +. . .. +.++|||||||++|||++|.
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~ 223 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223 (316)
T ss_dssp TTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSS
T ss_pred ccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCC
Confidence 99987543110 00 1 23 78999999999999999984
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=267.49 Aligned_cols=168 Identities=18% Similarity=0.245 Sum_probs=142.5
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
.+.||+|+||.||+|+. .+++.||||++... ....+.+|+++++.+. ||||+++++++. .+...++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~--------~~~~~~lv 84 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFH--------DQLHTFLV 84 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------CSSEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEE--------cCCEEEEE
Confidence 47899999999999995 46899999999743 3467889999999997 999999999985 44668999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC---ceEEeCCCCCcc
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL---TAKLSGYNIPLP 610 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~DfGla~~ 610 (640)
|||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 85 MELLNGGELFERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp ECCCCSCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 999999999999975 4568999999999999999999998 7999999999999998765 899999999976
Q ss_pred ccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... +.. +.++|||||||++|||++|.
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 206 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence 5322110 233 88999999999999999984
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=262.02 Aligned_cols=178 Identities=20% Similarity=0.368 Sum_probs=149.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 81 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-------- 81 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE--------
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc--------
Confidence 35688899999999999999995 578999999997532 234578999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 82 DSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp CSSEEEEEEECCTTEEHHHHHHT--CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEecCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEee
Confidence 34568999999999999999974 33568999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +.. +.++||||||+++|||++|.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 209 (278)
T 3cok_A 157 GLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209 (278)
T ss_dssp TTCEECC----------------------------CTHHHHHHHHHHHHHHSS
T ss_pred cceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 999765322110 223 78999999999999999984
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-31 Score=270.60 Aligned_cols=179 Identities=21% Similarity=0.369 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|.+.+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----- 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-----
Confidence 46788889999999999999984 2357899999975432 23467899999999999999999999884
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCC---------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCC
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK---------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPG 581 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 581 (640)
.....++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .+
T Consensus 97 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ 170 (314)
T 2ivs_A 97 ---QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MK 170 (314)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred ---cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CC
Confidence 34558999999999999999976322 2348899999999999999999999 69
Q ss_pred eeccCCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 582 IFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 582 iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+||||||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999976532211 0 233 889999999999999998 6
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=274.46 Aligned_cols=176 Identities=19% Similarity=0.393 Sum_probs=143.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE----EEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR----VSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||+||+|+. .+++. ||+|.++.. .....+++.+|++++++++||||++++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 5688889999999999999995 34443 688887543 23456789999999999999999999999862
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 89 ---~~~~~v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 89 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ---SSEEEEEECCTTCBHHHHHHH--STTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECC
T ss_pred ---CCeEEEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEcc
Confidence 237899999999999999975 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++........ +.. +.++|||||||++|||+| |.
T Consensus 161 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 217 (327)
T 3poz_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217 (327)
T ss_dssp TTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCC
Confidence 9999764322110 233 889999999999999999 63
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=272.05 Aligned_cols=189 Identities=15% Similarity=0.240 Sum_probs=155.4
Q ss_pred HHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCC-----------hHHHHHHHHHHhcCCCcccce
Q 006570 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL-----------PQSLMQHVELLSKLRHRHLVS 511 (640)
Q Consensus 443 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 511 (640)
.+++....++|+..+.||+|+||.||+|+..+|+.||||++....... .+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 567888899999999999999999999998789999999996532211 267899999999999999999
Q ss_pred eeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCc
Q 006570 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (640)
Q Consensus 512 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~N 591 (640)
+++++..... ......++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|
T Consensus 94 ~~~~~~~~~~---~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 164 (362)
T 3pg1_A 94 LRDIFVHFEE---PAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN 164 (362)
T ss_dssp CSEEEEECCT---TTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred eeeeEEeccC---CCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence 9999864321 23457899999998 699998874 34568999999999999999999999 699999999999
Q ss_pred eeecCCCceEEeCCCCCccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 592 ILLDKALTAKLSGYNIPLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 592 ILl~~~~~~kl~DfGla~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++.++.+||+|||+++........ + .. +.++|||||||++|||++|.
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 231 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231 (362)
T ss_dssp EEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCC
Confidence 99999999999999999754322110 2 33 88999999999999999984
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=273.73 Aligned_cols=179 Identities=17% Similarity=0.296 Sum_probs=153.0
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. +
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 96 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG------P 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC------S
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec------C
Confidence 5678889999999999999984 3588999999986554455779999999999999999999998863 2
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 97 GRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp SSCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCG
T ss_pred CCceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccc
Confidence 345689999999999999999752 2358999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++|||||||++|||++|+
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~ 227 (327)
T 3lxl_A 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 227 (327)
T ss_dssp GGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCC
Confidence 99986532221 0 223 78999999999999999985
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=282.49 Aligned_cols=180 Identities=17% Similarity=0.278 Sum_probs=146.4
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||+||+|+ ..+++.||||++.... ....+++.+|+++++.++||||+++++++... +..+.
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ--KTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC--CSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccC--Ccccc
Confidence 4678889999999999999998 4568999999997542 22346788999999999999999999988532 11123
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+|||||++ +|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEE
Confidence 4568999999976 57777742 38999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||+||++|||++|.
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 260 (464)
T 3ttj_A 210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260 (464)
T ss_dssp CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 99876432111 334 88999999999999999984
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=267.95 Aligned_cols=176 Identities=22% Similarity=0.296 Sum_probs=151.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|++.+.||+|+||.||+|+. .+|+.||||+++..... ..+++.+|++++++++||||+++++++.
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------ 85 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE------ 85 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe------
Confidence 4588899999999999999995 46899999999754321 3578999999999999999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----c
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----T 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~ 599 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 86 --~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 86 --NRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp --CSSEEEEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCC
T ss_pred --cCCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCC
Confidence 34568999999999999999964 4568999999999999999999999 6999999999999999887 7
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 158 ~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 215 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 215 (321)
T ss_dssp EEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred EEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCC
Confidence 999999999765432111 233 88999999999999999984
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=271.94 Aligned_cols=178 Identities=16% Similarity=0.255 Sum_probs=151.4
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--------CChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--------HLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
..++|+..+.||+|+||.||+|+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-- 99 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE-- 99 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE--
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 45678999999999999999998 45689999999975431 12346788999999999999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCC-CHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 520 YQDHPNTGSTVFLVLEHISNG-SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
.....++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 100 ------~~~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 100 ------NQGFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp ------CSSEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTS
T ss_pred ------eCCEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCC
Confidence 455689999999877 99999964 4468999999999999999999999 6999999999999999999
Q ss_pred ceEEeCCCCCccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ + .. +.++|||||||++|||++|.
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 227 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEE 227 (335)
T ss_dssp CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSS
T ss_pred cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCC
Confidence 9999999999865433211 2 22 67899999999999999984
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=272.88 Aligned_cols=181 Identities=20% Similarity=0.381 Sum_probs=149.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
..++|+..+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~--- 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT--- 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe---
Confidence 456788899999999999999985 245689999997542 23457899999999999 8999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCC--------------------CCCCHHHHHHHHHHHHHHhhhcccCCCC
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK--------------------DMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 580 (640)
.....++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+ .
T Consensus 120 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~ 191 (344)
T 1rjb_A 120 -----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---K 191 (344)
T ss_dssp -----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred -----eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---C
Confidence 344589999999999999999753221 348999999999999999999999 7
Q ss_pred CeeccCCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 581 ~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+|+||||||+||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 192 ~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 271 (344)
T 1rjb_A 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271 (344)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999976533221 1 233 889999999999999998 6
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 272 ~ 272 (344)
T 1rjb_A 272 V 272 (344)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=279.29 Aligned_cols=179 Identities=18% Similarity=0.295 Sum_probs=147.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|+..+.||+|+||.||+|+.. ++..||||+++... .....++.+|+.++++++||||+++++++.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----- 144 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL----- 144 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-----
Confidence 356788899999999999999843 46689999996432 223457889999999999999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccC----CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK----KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
.....++||||+++|+|.++++... ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 145 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 145 ---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp ---SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred ---cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCC
Confidence 3445799999999999999997632 22468999999999999999999999 6999999999999999554
Q ss_pred ---ceEEeCCCCCccccCCC----------C--c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 599 ---TAKLSGYNIPLPSKVRN----------T--L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 599 ---~~kl~DfGla~~~~~~~----------~--~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
.+||+|||+++...... + + +.. +.++|||||||++|||+| |
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 283 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 283 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 59999999997431110 0 0 333 889999999999999998 6
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=262.22 Aligned_cols=175 Identities=25% Similarity=0.397 Sum_probs=146.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC-------hHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL-------PQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++|+..+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----- 93 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH----- 93 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET-----
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec-----
Confidence 5688889999999999999995 578999999996543221 267899999999999999999999873
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCc-
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALT- 599 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~- 599 (640)
.. .++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.
T Consensus 94 ---~~--~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~ 163 (287)
T 4f0f_A 94 ---NP--PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDEN 163 (287)
T ss_dssp ---TT--TEEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTT
T ss_pred ---CC--CeEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCC
Confidence 11 2799999999999999874 34569999999999999999999998 57 999999999999988776
Q ss_pred ----eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 ----AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ----~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 225 (287)
T 4f0f_A 164 APVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225 (287)
T ss_dssp CSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSS
T ss_pred CceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCC
Confidence 999999999755332111 122 77999999999999999984
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=262.18 Aligned_cols=178 Identities=18% Similarity=0.258 Sum_probs=148.9
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
+|.....||+|+||.||+|+. .+++.||||.+........+.+.+|+++++.++||||+++++++. .....
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~~ 94 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS--------ENGFI 94 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEE--------ETTEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEE--------eCCcE
Confidence 455567899999999999994 568899999998765556688999999999999999999999985 23568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfGla~ 609 (640)
++||||+++|+|.+++........+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 95 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 9999999999999999864444567799999999999999999999 69999999999999988 8999999999997
Q ss_pred cccCCCC--------c----------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT--------L----------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~--------~----------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . . .. +.++||||||+++|||++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 222 (295)
T 2clq_A 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222 (295)
T ss_dssp ESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTS
T ss_pred ccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 6532110 0 1 22 78999999999999999984
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=280.18 Aligned_cols=181 Identities=19% Similarity=0.257 Sum_probs=152.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|.+.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~------~~~ 82 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------TTR 82 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------TTC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC------CCC
Confidence 46888899999999999999954 58999999997543 34457788999999999999999999988631 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCCceEEeC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKLSG 604 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~D 604 (640)
..++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEec
Confidence 679999999999999999764444559999999999999999999999 699999999999999 7788899999
Q ss_pred CCCCccccCCCCc----------------c--------CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------S--------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------~--------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ . .. +.++|||||||++|||+||.
T Consensus 160 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~ 220 (396)
T 4eut_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220 (396)
T ss_dssp GGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999765432211 1 23 67899999999999999984
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-31 Score=277.14 Aligned_cols=176 Identities=19% Similarity=0.366 Sum_probs=140.3
Q ss_pred CCCCCCccccCCccceEEEEeC--CC--cEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT--DG--SRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.|+..+.||+|+||.||+|+.. ++ ..||||.++.... ...+++.+|++++++++||||++++++|.. .
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~ 162 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR-------S 162 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC-------C
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-------C
Confidence 3556688999999999999853 22 3689999875322 334679999999999999999999998852 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.++++. ....+++..++.++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 163 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 163 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp SSCCEEEEECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CCCeEEEEECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecc
Confidence 3457999999999999999974 34568899999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCC--------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRNT--------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~~--------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+++....... + +.. +.++|||||||++|||+||
T Consensus 238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~ 292 (373)
T 3c1x_A 238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 292 (373)
T ss_dssp --------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 9975432110 0 233 8899999999999999994
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-29 Score=256.86 Aligned_cols=223 Identities=19% Similarity=0.239 Sum_probs=163.4
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
+.++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 46777777777777766667777788888888877777766777777788888888888777 5666554 67777777
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCC--CCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGP--KFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~--~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
++|.+++.++. |.++++|++|++++|+++. ..+.. +++|+.|++++|+++. +|..+. ++|++|+|++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 77777777665 7777777777777777753 33332 5677777777777763 555443 67777777777777
Q ss_pred CcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 254 GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 254 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|+++ .+|..+..+++|+.+++++|++++.++
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 777777777777777777777777766667777777777777777777 667777777777777777777776543
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=263.23 Aligned_cols=177 Identities=18% Similarity=0.287 Sum_probs=150.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .++..||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 79 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-------- 79 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe--------
Confidence 46788899999999999999985 45779999998643 2234577999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 80 DATRVYLILEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSC
T ss_pred cCCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEec
Confidence 34568999999999999999975 3458999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +.. +.++||||||+++|||++|.
T Consensus 154 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 204 (279)
T 3fdn_A 154 GWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204 (279)
T ss_dssp CEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCC
Confidence 998654322111 233 88999999999999999984
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-31 Score=273.64 Aligned_cols=184 Identities=17% Similarity=0.245 Sum_probs=149.9
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc-----cCCChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK-----QRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
+....++|+..+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-- 98 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE-- 98 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc--
Confidence 344567799999999999999999995 56889999999753 2334578999999999999999999999985
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------------------------------CCCCCHHHHHH
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------------------------------KDMLKWPQRMA 562 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------------------------~~~l~~~~~~~ 562 (640)
.....++||||+++|+|.+++..... ...+++..+..
T Consensus 99 ------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (345)
T 3hko_A 99 ------DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN 172 (345)
T ss_dssp ------CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHH
T ss_pred ------cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence 34568999999999999999952110 11235677889
Q ss_pred HHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC--ceEEeCCCCCccccCCC------------C--c-------c-
Q 006570 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL--TAKLSGYNIPLPSKVRN------------T--L-------S- 618 (640)
Q Consensus 563 i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~--~~kl~DfGla~~~~~~~------------~--~-------~- 618 (640)
++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++...... + + +
T Consensus 173 i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 249 (345)
T 3hko_A 173 IMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249 (345)
T ss_dssp HHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS
T ss_pred HHHHHHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC
Confidence 99999999999999 6999999999999998776 89999999997542211 0 0 1
Q ss_pred -CC-CCccceehhhHHHHHHhhcC
Q 006570 619 -FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 619 -~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.. +.++|||||||++|||++|.
T Consensus 250 ~~~~~~~~DiwslG~il~el~~g~ 273 (345)
T 3hko_A 250 NESYGPKCDAWSAGVLLHLLLMGA 273 (345)
T ss_dssp SSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCC
Confidence 33 78999999999999999984
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-29 Score=259.37 Aligned_cols=223 Identities=19% Similarity=0.209 Sum_probs=166.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
+.++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 56777888888777766777888888888888888887777777888888888888888877 6666654 77888888
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCC--CCCCccc--ccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGP--KFPSLSK--NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~--~~~~~~~--~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
++|++++.++. |.++++|++|++++|.++. ..+..+. +|+.|++++|++++ +|..+. ++|++|+|++|++++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQA 207 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCc
Confidence 88888777665 7778888888888887752 4443321 77777888888774 555543 577778888888877
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+++ .+|..+..+++|+.+++++|.+++.++
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~ 281 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGV 281 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCT
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccCh
Confidence 77777777778888888888887766667777778888888888777 677777777778888888887776543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=276.74 Aligned_cols=177 Identities=19% Similarity=0.320 Sum_probs=143.6
Q ss_pred cCCCCC-CccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhc-CCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPT-NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSK-LRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|... +.||+|+||+||+|+. .+++.||||+++. ...+.+|++++.+ .+||||+++++++..... +.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~----~~ 131 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA----GR 131 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeeccc----CC
Confidence 445554 6899999999999995 4689999999963 2567788888744 589999999998753221 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...|+|||||++|+|.+++.. .....+++..+..|+.|++.||+|||+ .+|+||||||+|||++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHC-C---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEe
Confidence 568999999999999999975 223468999999999999999999999 69999999999999998 78999999
Q ss_pred CCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 260 (400)
T 1nxk_A 208 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 260 (400)
T ss_dssp CTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSS
T ss_pred cccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCC
Confidence 9999865432110 233 88999999999999999984
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-30 Score=286.51 Aligned_cols=274 Identities=14% Similarity=0.028 Sum_probs=174.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccEEeCC------------------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCcc
Q 006570 49 VLQGWTDWTNFCYLPSSSSLKIVCTN------------------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSAN 110 (640)
Q Consensus 49 ~l~~W~~~~~~C~~~~~~~~gv~C~~------------------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n 110 (640)
.+++|..+.+||.. ...|.++.|+. ..+..++++++.++. +++..+...+.|+.|+|++|
T Consensus 8 ~l~~~~~~~~C~~~-~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~-lp~~~~~~l~~L~~L~L~~n 85 (597)
T 3oja_B 8 NVKPRQPEYKCIDS-NLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDL 85 (597)
T ss_dssp ---CCCSEECCCCC---CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESE-ECTHHHHHCCCCSEEECTTS
T ss_pred cccCCCCCCcCccc-CcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCC-cCHHHHccCCCCcEEECCCC
Confidence 46788876666641 11233444431 234667777766532 22111222468899999999
Q ss_pred CCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC
Q 006570 111 FNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD 190 (640)
Q Consensus 111 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 190 (640)
.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.+++.+|.
T Consensus 86 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 86 QIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 99888888999999999999999999888888889999999999999999955555578999999999999999998886
Q ss_pred -ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccc-------------------cC------------------
Q 006570 191 -LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS-------------------EI------------------ 232 (640)
Q Consensus 191 -~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~-------------------~~------------------ 232 (640)
|..+++|++|+|++|.+++..+..+++|+.|++++|.+++ ..
T Consensus 166 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~ 245 (597)
T 3oja_B 166 TFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLT 245 (597)
T ss_dssp TTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCC
T ss_pred hhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCC
Confidence 8899999999999999887554444444443333333332 11
Q ss_pred -CccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCC
Q 006570 233 -PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311 (640)
Q Consensus 233 -p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~ 311 (640)
+..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+
T Consensus 246 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l 323 (597)
T 3oja_B 246 DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 323 (597)
T ss_dssp CCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred CChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccC
Confidence 2334445555555555555555555555555555555555555544 3444444555555555555554 344444445
Q ss_pred CCCceeeeccccccC
Q 006570 312 SLNRTVVSTWNCLSG 326 (640)
Q Consensus 312 ~~l~~l~l~~N~l~~ 326 (640)
++|+.|++++|.+++
T Consensus 324 ~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 324 DRLENLYLDHNSIVT 338 (597)
T ss_dssp TTCSEEECCSSCCCC
T ss_pred CCCCEEECCCCCCCC
Confidence 555555555555544
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=263.35 Aligned_cols=184 Identities=23% Similarity=0.370 Sum_probs=152.3
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC-----
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD----- 522 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----- 522 (640)
...+|+..+.||+|+||.||+|+.. +++.||+|+++... +.+.+|++++++++||||+++++++.....+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456888999999999999999964 78999999997543 4678999999999999999999987531110
Q ss_pred ---CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 523 ---HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 523 ---~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
........++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCC
Confidence 001234589999999999999999752 23568999999999999999999999 69999999999999999999
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++||||||+++|||++|+
T Consensus 161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~ 218 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 218 (284)
T ss_dssp EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCC
T ss_pred EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcC
Confidence 999999998765432111 333 88999999999999999985
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=270.48 Aligned_cols=187 Identities=19% Similarity=0.302 Sum_probs=155.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..+|+..+.||+|+||.||+|+. .+++.||||++........+.+.+|+.++.++. ||||+++++++...........
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 34688899999999999999995 568999999987554444577899999999996 9999999999865444333455
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCceEEeCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
...++||||++ |+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecC
Confidence 67899999996 6999999764455679999999999999999999998 57 999999999999999999999999
Q ss_pred CCCccccCCCC----------------------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------------------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------------------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++|||||||++|||+||.
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~ 250 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCC
Confidence 99976532110 0 122 67999999999999999984
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-30 Score=265.10 Aligned_cols=176 Identities=17% Similarity=0.289 Sum_probs=140.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|+..+.||+|+||.||+|+... +..||+|.++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------- 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-------
Confidence 4578888999999999999998532 45799999875322 23467899999999999999999999873
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 87 --~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 87 --ENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC
T ss_pred --cCccEEEEecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECc
Confidence 2347999999999999999975 23468999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... + ... +.++|||||||++|||++ |
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g 214 (281)
T 1mp8_A 160 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 214 (281)
T ss_dssp -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcC
Confidence 999976543211 1 233 789999999999999997 5
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=278.93 Aligned_cols=178 Identities=19% Similarity=0.285 Sum_probs=146.5
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--------CChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--------HLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
...++|...+.||+|+||+||+|+. .+++.||||++..... .....+.+|+++|++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 3467899999999999999999984 5689999999975321 12235889999999999999999999873
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA- 597 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~- 597 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.+
T Consensus 211 --------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 211 --------AEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp --------SSEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSS
T ss_pred --------cCceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCC
Confidence 2347999999999999999864 4568999999999999999999998 699999999999999754
Q ss_pred --CceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 --LTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 --~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||+++........ ... +.++|||||||++|||+||.
T Consensus 277 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~ 341 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 341 (419)
T ss_dssp SSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSS
T ss_pred CcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCC
Confidence 45999999999876432210 122 67999999999999999984
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-31 Score=269.93 Aligned_cols=175 Identities=19% Similarity=0.219 Sum_probs=143.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC--ChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH--LPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ...++..|+..+.++ +||||+++++++. .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~--------~ 128 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE--------E 128 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------E
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE--------e
Confidence 56888999999999999999964 7999999998653322 223455566555555 8999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+ +|+|.+++... ...++|..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 129 GGILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCT
T ss_pred CCEEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccce
Confidence 45689999999 67999998753 3469999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+++........ ... +.++|||||||++|||++|
T Consensus 203 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g 251 (311)
T 3p1a_A 203 LLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACN 251 (311)
T ss_dssp TCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHT
T ss_pred eeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhC
Confidence 98765332111 224 8899999999999999998
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-30 Score=266.10 Aligned_cols=176 Identities=19% Similarity=0.248 Sum_probs=149.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++. ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~ 74 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR--------RK 74 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ET
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee--------cC
Confidence 5788899999999999999995 45899999998654322 2456889999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 75 RRLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp TEEEEEEECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CeEEEEEEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 568999999999999998864 4568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++|||||||++|||+||.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 200 (311)
T 4agu_A 149 ARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200 (311)
T ss_dssp CEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred chhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence 9765422110 2 34 88999999999999999984
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=274.32 Aligned_cols=181 Identities=13% Similarity=0.160 Sum_probs=145.3
Q ss_pred hcCCCCCCccccCCccceEEEEeCC------CcEEEEEEeecccCC-----------ChHHHHHHHHHHhcCCCccccee
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRH-----------LPQSLMQHVELLSKLRHRHLVSI 512 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l 512 (640)
.++|++.+.||+|+||.||+|+... ++.||||++...... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578889999999999999998654 478999998754311 11234456667778889999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
++++..... .....++||||+ +|+|.+++.. ....+++..++.|+.|++.||+|||+ .+|+||||||+||
T Consensus 114 ~~~~~~~~~----~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHDKN----GKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEET----TEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGE
T ss_pred EeeeeeccC----CcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHE
Confidence 999874321 235689999999 9999999975 34569999999999999999999999 6999999999999
Q ss_pred eec--CCCceEEeCCCCCccccCC---------------CCc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 593 LLD--KALTAKLSGYNIPLPSKVR---------------NTL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 593 Ll~--~~~~~kl~DfGla~~~~~~---------------~~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++ .++.+||+|||+++..... .+. +.. +.++|||||||++|||+||.
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 999 8899999999999754321 110 333 88999999999999999984
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-30 Score=261.95 Aligned_cols=175 Identities=18% Similarity=0.366 Sum_probs=151.1
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++. .....
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 78 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL--------EQAPI 78 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------SSSSC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc--------cCCCe
Confidence 4677889999999999999998888899999998543 34578999999999999999999999885 33458
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp EEEECCCTTCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEeCCCCCcHHHHHhh--CcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccc
Confidence 999999999999999975 23568999999999999999999999 6999999999999999999999999999976
Q ss_pred ccCCC------C-----c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRN------T-----L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~------~-----~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
..... . . +.. +.++||||||+++|||++ |
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g 202 (267)
T 3t9t_A 154 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 202 (267)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccC
Confidence 53211 0 0 233 889999999999999999 5
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=273.28 Aligned_cols=186 Identities=19% Similarity=0.290 Sum_probs=146.8
Q ss_pred HHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC--
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-- 523 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~-- 523 (640)
+...++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+|+++++.++||||+++++++.......
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999984 6789999999875432 2347999999999999999999986432210
Q ss_pred ----------------------------CCCCCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhc
Q 006570 524 ----------------------------PNTGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFL 574 (640)
Q Consensus 524 ----------------------------~~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yL 574 (640)
.......++||||++ |+|.+.+... .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 023455889999998 5888887642 2356799999999999999999999
Q ss_pred ccCCCCCeeccCCCCCceeec-CCCceEEeCCCCCccccCCCCc----------------c-CC-CCccceehhhHHHHH
Q 006570 575 HTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPLPSKVRNTL----------------S-FH-TDRSSLYKIILIICV 635 (640)
Q Consensus 575 H~~~~~~iiHrDlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~e 635 (640)
|+ .+|+||||||+||+++ +++.+||+|||+++........ + .. +.++||||+||++||
T Consensus 158 H~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 98 7999999999999998 6899999999999865322111 2 33 889999999999999
Q ss_pred HhhcC
Q 006570 636 ITLCC 640 (640)
Q Consensus 636 lltG~ 640 (640)
|++|.
T Consensus 235 ll~g~ 239 (383)
T 3eb0_A 235 LILGK 239 (383)
T ss_dssp HHHSS
T ss_pred HHhCC
Confidence 99984
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=268.18 Aligned_cols=184 Identities=16% Similarity=0.326 Sum_probs=149.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++...........
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788899999999999999995 578999999986543 2335678899999999999999999999864321111124
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ +|.+.+.. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 568999999975 88888764 33568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC------------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN------------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~------------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... + + + .. +.++|||||||++|||+||.
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 226 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCC
Confidence 97543110 0 0 2 33 88999999999999999984
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-30 Score=260.60 Aligned_cols=176 Identities=15% Similarity=0.268 Sum_probs=151.2
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++. .
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 85 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH--------D 85 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE--------c
Confidence 56888999999999999999954 5789999999653 2334578999999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg 159 (284)
T 2vgo_A 86 RKRIYLMLEFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 159 (284)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred CCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEeccc
Confidence 4568999999999999999975 2458999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... +.. +.++||||||+++|||++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 209 (284)
T 2vgo_A 160 WSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209 (284)
T ss_dssp TCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCC
Confidence 98654322111 233 88999999999999999984
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=259.08 Aligned_cols=179 Identities=18% Similarity=0.350 Sum_probs=148.4
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+.. ++.||||+++.... ...+.+.+|++++++++||||+++++++... ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~ 82 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP------PAP 82 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT------TSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC------CCC
Confidence 56888899999999999999985 88999999976432 2346799999999999999999999988521 235
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
..++||||+++|+|.++++. .....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~ 158 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHE-GTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMAD 158 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHS-CSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGG
T ss_pred CeEeeecccCCCcHHHHHhh-cccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEecc
Confidence 67999999999999999975 223468999999999999999999998 57 9999999999999999999999888
Q ss_pred CCccccCCCCc------------cCC----CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL------------SFH----TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~------------~~~----~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... +.. +.++|||||||++|||+||.
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 208 (271)
T 3kmu_A 159 VKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208 (271)
T ss_dssp SCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCS
T ss_pred ceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 87554322211 211 33799999999999999984
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=268.95 Aligned_cols=179 Identities=20% Similarity=0.322 Sum_probs=151.2
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 114 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA------ 114 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec------
Confidence 5678889999999999999983 35889999999865544557899999999999999999999988531
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 115 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Df 189 (326)
T 2w1i_A 115 GRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDF 189 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCC
T ss_pred CCCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecC
Confidence 233579999999999999999752 3458999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++||||||+++|||+||.
T Consensus 190 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~ 245 (326)
T 2w1i_A 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245 (326)
T ss_dssp TTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTT
T ss_pred cchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcC
Confidence 99976543211 0 223 78999999999999999973
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-30 Score=288.29 Aligned_cols=169 Identities=19% Similarity=0.346 Sum_probs=144.4
Q ss_pred ccccCCccceEEEEeC---CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 458 LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
.||+|+||.||+|.+. ++..||||+++... ....+++.+|+++|++++||||++++++|.. +..++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---------~~~~lv 413 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---------EALMLV 413 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---------SSEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---------CCeEEE
Confidence 7999999999999853 45679999998643 3356889999999999999999999999851 348999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
||||++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 414 ~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999999964 34568999999999999999999999 6999999999999999999999999999987532
Q ss_pred CCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 614 RNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 614 ~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
... . ... +.++|||||||++|||+| |.
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~ 537 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 211 1 234 889999999999999998 63
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=261.42 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=142.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+.. +++.||||++....... .+.+.+|++.+++++||||+++++++. .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~--------~ 102 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH--------T 102 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------E
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE--------E
Confidence 56888999999999999999954 58999999998654322 367899999999999999999999985 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..|+||||+++|+|.++++. . ....++.+|+.|++.||+|||+ .+|+||||||+|||++.++.+||+++|
T Consensus 103 ~~~~~lv~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 103 RAGGLVVAEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp TTEEEEEEECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred CCcEEEEEEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc
Confidence 3568999999999999999953 1 3566789999999999999999 699999999999999999999999877
Q ss_pred CCccccCCCCccCCCCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTLSFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
... ..+.++|||||||++|||+||.
T Consensus 175 ~~~---------~~~~~~Di~slG~il~elltg~ 199 (286)
T 3uqc_A 175 TMP---------DANPQDDIRGIGASLYALLVNR 199 (286)
T ss_dssp CCT---------TCCHHHHHHHHHHHHHHHHHSE
T ss_pred ccC---------CCCchhHHHHHHHHHHHHHHCC
Confidence 642 2288999999999999999984
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=263.76 Aligned_cols=178 Identities=16% Similarity=0.331 Sum_probs=152.9
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..++|+..+.||+|+||.||+|+.. ++..||+|++... ....+.+.+|++++++++||||+++++++. ..
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~ 81 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--------RE 81 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--------cC
Confidence 4567888899999999999999964 4889999999753 234578999999999999999999999884 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 82 PPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp SSEEEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred CCEEEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCcc
Confidence 5689999999999999999762 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+......... +.. +.++||||||+++|||++ |
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g 209 (288)
T 3kfa_A 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209 (288)
T ss_dssp GGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 9866433211 233 889999999999999998 5
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-31 Score=275.24 Aligned_cols=176 Identities=18% Similarity=0.263 Sum_probs=148.6
Q ss_pred cCCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
++|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---- 129 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ---- 129 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE----
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe----
Confidence 5688899999999999999986 368999999986432 23456778899999999 6999999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 130 ----~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~k 199 (355)
T 1vzo_A 130 ----TETKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVV 199 (355)
T ss_dssp ----ETTEEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEE
T ss_pred ----eCceEEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEE
Confidence 34568999999999999999975 3458999999999999999999998 6999999999999999999999
Q ss_pred EeCCCCCccccCCCC-----------c-------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNT-----------L-------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~-----------~-------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++....... + + .. +.++|||||||++|||+||.
T Consensus 200 l~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~ 259 (355)
T 1vzo_A 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259 (355)
T ss_dssp ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred EeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC
Confidence 999999875422110 0 1 22 78999999999999999984
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=267.15 Aligned_cols=180 Identities=21% Similarity=0.334 Sum_probs=151.1
Q ss_pred HhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~--- 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT--- 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe---
Confidence 346788889999999999999984 3467899999975432 2346789999999999 9999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCC---------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeecc
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK---------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr 585 (640)
.+...++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||
T Consensus 98 -----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~ 169 (313)
T 1t46_A 98 -----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHR 169 (313)
T ss_dssp -----SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred -----cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecC
Confidence 34457999999999999999975322 2258999999999999999999999 699999
Q ss_pred CCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 586 NLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 586 Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||||+||+++.++.+||+|||+++....... . +.. +.++||||||+++|||+| |
T Consensus 170 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 244 (313)
T 1t46_A 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244 (313)
T ss_dssp CCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999986643321 1 233 889999999999999998 5
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-30 Score=268.04 Aligned_cols=259 Identities=18% Similarity=0.114 Sum_probs=198.1
Q ss_pred CCCCCCCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeec
Q 006570 52 GWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSL 131 (640)
Q Consensus 52 ~W~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L 131 (640)
.|.....+|.|. ++ |+ +++++++.. |......++.|+|++|.+.+..+..|.++++|++|+|
T Consensus 22 ~~~~~~~~C~~~-----~~-c~--------~~~~~l~~i----P~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 83 (353)
T 2z80_A 22 SSNQASLSCDRN-----GI-CK--------GSSGSLNSI----PSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVL 83 (353)
T ss_dssp -----CCEECTT-----SE-EE--------CCSTTCSSC----CTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCccCCCCCCC-----eE-ee--------CCCCCcccc----cccccccCcEEECCCCcCcccCHHHhccCCCCCEEEC
Confidence 354456778886 34 53 344444322 1112257888999999887776678899999999999
Q ss_pred ccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCC--CccCcCcCCeeEccCCC-CC
Q 006570 132 VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGND-FG 208 (640)
Q Consensus 132 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~-l~ 208 (640)
++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++.++ .+.++++|++|++++|+ ++
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 84 TSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC
T ss_pred CCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc
Confidence 9999988778889999999999999999985444448889999999999999988777 38889999999999884 55
Q ss_pred CCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc------
Q 006570 209 PKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA------ 279 (640)
Q Consensus 209 ~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~------ 279 (640)
...+.. +++|+.|++++|++++..|..+.++++|++|++++|+++...+..+..+++|+.|++++|++++.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc
Confidence 554443 67888899999999888888899999999999999998754444455688899999999988774
Q ss_pred -------------------------CCccccCCCCCCEEeccCccCcccCCCC-ccCCCCCceeeeccccccCccC
Q 006570 280 -------------------------LPVNISCSAKLNFVEISHNLLIGKLPSC-IGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 280 -------------------------~p~~~~~~~~L~~L~ls~N~l~~~~p~~-~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+|..+..+++|+.|++++|+++ .+|.. +..+++|+.+++++|.+++..+
T Consensus 244 ~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 3444667889999999999998 45555 5889999999999998887543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-30 Score=269.40 Aligned_cols=179 Identities=18% Similarity=0.377 Sum_probs=148.3
Q ss_pred hcCCCCCCccccCCccceEEEEe--------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL--------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|+..+.||+|+||.||+|+. .++..||||+++.... ...+++.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-- 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc--
Confidence 46788899999999999999985 2467899999975432 2346789999999999 8999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+|||
T Consensus 112 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 182 (334)
T 2pvf_A 112 ------QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 182 (334)
T ss_dssp ------SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred ------cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCC
Confidence 34568999999999999999975321 2348999999999999999999999 6999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 256 (334)
T 2pvf_A 183 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256 (334)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999976533211 0 233 889999999999999998 5
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=268.08 Aligned_cols=180 Identities=25% Similarity=0.425 Sum_probs=143.3
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHH--HhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVEL--LSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++..... ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~---~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTA---DGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECT---TSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheeccccccc---CCC
Confidence 35788899999999999999987 58999999997432 3455555555 445899999999987653222 234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC------CCCeeccCCCCCceeecCCCceE
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV------APGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiHrDlk~~NILl~~~~~~k 601 (640)
...++||||+++|+|.+++.. ...++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 567899999999999999964 23589999999999999999999831 12999999999999999999999
Q ss_pred EeCCCCCccccCCC----------------Cc---------c-------CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN----------------TL---------S-------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~----------------~~---------~-------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++...... +. + .. +.++|||||||++|||+||+
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~ 232 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC 232 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcC
Confidence 99999997653211 00 1 12 57899999999999999984
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=263.68 Aligned_cols=181 Identities=17% Similarity=0.256 Sum_probs=150.0
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 524 (640)
..++|+..+.||+|+||+||+|+.. +++.||||+++.... ....++.+|+..+..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~------- 81 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA------- 81 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE-------
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee-------
Confidence 3467888999999999999999954 789999999985432 2346788999999999 9999999999985
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC------
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA------ 597 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~------ 597 (640)
.....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 82 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~ 157 (289)
T 1x8b_A 82 -EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAA 157 (289)
T ss_dssp -ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------
T ss_pred -cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccc
Confidence 3456899999999999999997532 12568999999999999999999999 699999999999999844
Q ss_pred -------------CceEEeCCCCCccccCCCCc-------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 598 -------------LTAKLSGYNIPLPSKVRNTL-------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 -------------~~~kl~DfGla~~~~~~~~~-------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..+||+|||.+......... +. . +.++|||||||++|||++|.
T Consensus 158 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 228 (289)
T 1x8b_A 158 SEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228 (289)
T ss_dssp ------------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence 47999999999776433221 22 2 57999999999999999884
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-30 Score=268.32 Aligned_cols=177 Identities=17% Similarity=0.246 Sum_probs=151.4
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..+|...+.||+|+||.||+++.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------- 111 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-------- 111 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--------
Confidence 356888999999999999999954 578999999975432 23467889999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 112 DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeec
Confidence 34568999999999999999864 3468999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++||||||+++|||++|.
T Consensus 186 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 238 (335)
T 2owb_A 186 GLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238 (335)
T ss_dssp TTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCc
Confidence 999765322110 233 88999999999999999984
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=290.15 Aligned_cols=178 Identities=17% Similarity=0.213 Sum_probs=151.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~------ 412 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 412 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB------
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE------
Confidence 456788999999999999999995 46889999999753 234457788999999988 7999999998763
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
+....|+||||+++|+|.++++. ...+++..++.|+.||+.||+|||+ .+||||||||+|||++.++.+||+
T Consensus 413 --~~~~~~lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 413 --TMDRLYFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEEC
T ss_pred --eCCEEEEEEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEe
Confidence 45678999999999999999975 3458999999999999999999999 799999999999999999999999
Q ss_pred CCCCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... + +.. +.++|||||||++|||++|.
T Consensus 485 DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~ 539 (674)
T 3pfq_A 485 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539 (674)
T ss_dssp CCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred ecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCC
Confidence 9999985321110 0 234 89999999999999999984
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=256.60 Aligned_cols=253 Identities=17% Similarity=0.131 Sum_probs=221.7
Q ss_pred cEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCc
Q 006570 69 KIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLW 137 (640)
Q Consensus 69 gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~ 137 (640)
.+.|++ ..++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|.++++|++|+|++|.++
T Consensus 35 ~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 113 (330)
T 1xku_A 35 VVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 113 (330)
T ss_dssp EEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS
T ss_pred EEEecCCCccccCccCCCCCeEEECCCCcCCEeC-hhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC
Confidence 688863 25788999999986543 222445689999999999999988999999999999999999996
Q ss_pred CCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCc--cCCC-ccCcCcCCeeEccCCCCCCCCCCc
Q 006570 138 GPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG--SVPD-LQRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 138 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~-~~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
.+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+. +.++++|++|++++|+++......
T Consensus 114 -~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~ 190 (330)
T 1xku_A 114 -ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL 190 (330)
T ss_dssp -BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSC
T ss_pred -ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccc
Confidence 6777665 799999999999997777789999999999999999974 5554 899999999999999998766566
Q ss_pred ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEe
Q 006570 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVE 294 (640)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ 294 (640)
.++|+.|++++|++++..|..|.++++|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 191 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 191 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 799999999999999998999999999999999999999888889999999999999999998 5888899999999999
Q ss_pred ccCccCcccCCCCccCC------CCCceeeeccccccC
Q 006570 295 ISHNLLIGKLPSCIGSN------SLNRTVVSTWNCLSG 326 (640)
Q Consensus 295 ls~N~l~~~~p~~~~~~------~~l~~l~l~~N~l~~ 326 (640)
+++|+|++..+..|... ..++.+++++|.+..
T Consensus 270 l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 270 LHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 99999998777777543 678889999998764
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-31 Score=272.50 Aligned_cols=183 Identities=17% Similarity=0.323 Sum_probs=152.2
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEE
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCI 517 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 517 (640)
+++...++|+..+.||+|+||.||+|+.. +++.||||.+..... ....++.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34445678999999999999999999853 367899999975432 23456889999999999999999999884
Q ss_pred ecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCC
Q 006570 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~ 590 (640)
.+...++||||+++|+|.++++... ....+++..++.++.|++.||+|||+ .+|+||||||+
T Consensus 99 --------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~ 167 (322)
T 1p4o_A 99 --------QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAAR 167 (322)
T ss_dssp --------SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGG
T ss_pred --------cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccc
Confidence 3455799999999999999997522 12457899999999999999999999 69999999999
Q ss_pred ceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 591 NILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 591 NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+|
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 235 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999999999999976532210 0 233 889999999999999999
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-30 Score=259.60 Aligned_cols=176 Identities=22% Similarity=0.325 Sum_probs=149.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|+..+.||+|+||.||+|+.. +++.||+|.++.... ...+.+.+|++++++++||||+++++++.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------ 78 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE------ 78 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec------
Confidence 45788899999999999999964 689999999975421 13578999999999999999999999985
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----c
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----T 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~ 599 (640)
.....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 79 --NKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCC
T ss_pred --CCCeEEEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCc
Confidence 34568999999999999999965 3468999999999999999999999 7999999999999998877 8
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||++......... ... +.++||||||+++|||++|.
T Consensus 151 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 208 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 208 (283)
T ss_dssp EEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCC
Confidence 999999999765332110 233 88999999999999999984
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-30 Score=262.17 Aligned_cols=176 Identities=17% Similarity=0.248 Sum_probs=150.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|...+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++. .
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~ 86 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE--------D 86 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec--------c
Confidence 56788899999999999999954 588999999975432 23467889999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 160 (294)
T 2rku_A 87 NDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFG 160 (294)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEecc
Confidence 4568999999999999999864 3468999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||||+++|||+||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 212 (294)
T 2rku_A 161 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212 (294)
T ss_dssp TCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99765321110 233 88999999999999999984
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-30 Score=259.95 Aligned_cols=177 Identities=19% Similarity=0.362 Sum_probs=140.4
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC----CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+.. ++.||||+++.... ...+.+.+|+++++.++||||+++++++. .
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 77 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL--------K 77 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC--------C
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--------c
Confidence 56788899999999999999974 88999999875422 23478899999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--------CC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--------AL 598 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--------~~ 598 (640)
+...++||||+++|+|.+++. ...+++..++.++.|++.||+|||+....+|+||||||+||+++. ++
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~ 153 (271)
T 3dtc_A 78 EPNLCLVMEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153 (271)
T ss_dssp C--CEEEEECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC
T ss_pred CCceEEEEEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCc
Confidence 445799999999999999985 346899999999999999999999932122999999999999986 67
Q ss_pred ceEEeCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ +.. +.++||||||+++|||+||.
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 211 (271)
T 3dtc_A 154 ILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211 (271)
T ss_dssp CEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred ceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 8999999999765332211 233 88999999999999999984
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-30 Score=272.87 Aligned_cols=179 Identities=18% Similarity=0.309 Sum_probs=142.1
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDH 523 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~ 523 (640)
...++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++.++. ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~----- 80 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA----- 80 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec-----
Confidence 3457899999999999999999984 568999999986432 223466889999999997 9999999999862
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
+.....|+|||||+ |+|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 81 -~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 81 -DNDRDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp -TTSSCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEEC
T ss_pred -CCCCEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEec
Confidence 13346899999997 599999964 368999999999999999999999 799999999999999999999999
Q ss_pred CCCCCccccCC-----------------------------CC--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVR-----------------------------NT--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~-----------------------------~~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++..... .+ + + .. +.++||||+||++|||++|.
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 228 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence 99999754220 00 0 2 33 88999999999999999984
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-30 Score=271.73 Aligned_cols=181 Identities=15% Similarity=0.289 Sum_probs=144.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+++.+|+++++.++||||+++++++.... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE--TLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS--STTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC--cccc
Confidence 35788899999999999999995 5689999999964322 22467889999999999999999999885321 1112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+ +++|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeee
Confidence 34579999999 7899999964 358999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ + .. +.++||||+||+++||++|.
T Consensus 174 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 223 (367)
T 1cm8_A 174 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223 (367)
T ss_dssp TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence 99875432211 2 34 89999999999999999984
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-30 Score=264.04 Aligned_cols=177 Identities=18% Similarity=0.341 Sum_probs=147.1
Q ss_pred cCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..|+..+.||+|+||+||+|+..+ ...||+|.++.... ...+.+.+|++++++++||||+++++++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 97 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR------- 97 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC-------
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc-------
Confidence 357778999999999999998532 23589999875322 234678999999999999999999998752
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 98 ~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 98 SEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcc
Confidence 33457999999999999999974 34568999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC--------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNT--------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~--------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|+++....... . +.. +.++||||||+++|||++|
T Consensus 173 g~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~ 228 (298)
T 3f66_A 173 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 228 (298)
T ss_dssp GGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhC
Confidence 99976532211 0 233 8899999999999999995
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-30 Score=263.97 Aligned_cols=177 Identities=18% Similarity=0.311 Sum_probs=148.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|...+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++. ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 79 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE--------STT 79 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE--------CSS
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc--------cCC
Confidence 35688889999999999999995 468999999998654445567899999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 80 HYYLVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEEEEcCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccC
Confidence 68999999999999999965 3458999999999999999999999 699999999999999 78899999999
Q ss_pred CCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 154 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 204 (304)
T 2jam_A 154 GLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY 204 (304)
T ss_dssp STTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSS
T ss_pred CcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence 999765432110 233 78999999999999999984
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-31 Score=271.44 Aligned_cols=264 Identities=18% Similarity=0.105 Sum_probs=216.8
Q ss_pred CCCCCCCCCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCC-CChhhhhhc-------
Q 006570 50 LQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFN-IDRFFTILT------- 121 (640)
Q Consensus 50 l~~W~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~-~~~~~~~l~------- 121 (640)
..+|.....|+.+. ...+.|...+++.+++++|.+ .++ ......++.|+|++|.+ ...+|..+.
T Consensus 21 ~~~~~~~~~c~~~~---~~~~~~~~~~L~~l~l~~n~l--~~p---~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~ 92 (312)
T 1wwl_A 21 KPDWSSAFNCLGAA---DVELYGGGRSLEYLLKRVDTE--ADL---GQFTDIIKSLSLKRLTVRAARIPSRILFGALRVL 92 (312)
T ss_dssp SCCGGGGGGSSSCS---EEEEEEEEEECTTHHHHCCTT--CCC---HHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHH
T ss_pred ccchHHHhhhhccc---cEEEEccCCCceeEeeccccc--ccH---HHHHHHHhhcccccccccCCCcCHHHHHHHHHhc
Confidence 44675444444443 224667667788888888887 222 11123488999999988 445666665
Q ss_pred CCCCCcEeecccCcCcCCCCccc--cCCCCCCEEEcccCcccccCCccccCC-----CCCCEEEccCccCCccCCC-ccC
Q 006570 122 KLSNLKVLSLVSLGLWGPLPSKI--NRFWSLEVLNISSNFIYGEIPMEITSL-----KNLKSIVLADNLLNGSVPD-LQR 193 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~-~~~ 193 (640)
++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++.+|. |.+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 89999999999999999999887 9999999999999999977 8888877 9999999999999999876 999
Q ss_pred cCcCCeeEccCCCCCCCC-------CCcccccceeecccCcccc--cCC-ccccCCCCccEEEccCCcccCcCC-ccccC
Q 006570 194 LVLLEELNLGGNDFGPKF-------PSLSKNIVSVILRNNSLRS--EIP-SGLKNFDQLKQFDISSNNFVGPIQ-SFLFS 262 (640)
Q Consensus 194 l~~L~~L~L~~N~l~~~~-------~~~~~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 262 (640)
+++|++|+|++|++.+.. +..+++|++|+|++|++++ .++ ..+.++++|+.|+|++|++++.+| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 999999999999987642 2447899999999999983 223 345688999999999999998775 45677
Q ss_pred CCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 263 l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+++|++|+|++|+|+ .+|..+. ++|+.||+++|+|++. |. +..+++|+.+++++|.+++.
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 899999999999998 5888776 8999999999999976 66 89999999999999999873
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-30 Score=263.38 Aligned_cols=177 Identities=18% Similarity=0.247 Sum_probs=146.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|...+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-------- 104 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE-------- 104 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe--------
Confidence 46799999999999999999995 468899999997543222 367899999999999999999999986
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 105 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 105 IDGQLYVDMRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp ETTEEEEEEECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSC
T ss_pred eCCeEEEEEEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecC
Confidence 24568999999999999999975 3458999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++........ + +.. +.++||||||+++|||+||.
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 232 (309)
T 2h34_A 179 GIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232 (309)
T ss_dssp CC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSS
T ss_pred ccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCC
Confidence 99876532210 0 233 88999999999999999984
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=261.96 Aligned_cols=175 Identities=22% Similarity=0.352 Sum_probs=140.7
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||+||+|+.. ..||||+++.... ...+.+.+|++++++++||||+++++++. .
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------~ 91 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---------A 91 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------S
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc---------C
Confidence 457888999999999999999864 3699999975432 23467899999999999999999999762 2
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGL 166 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred CccEEEEEecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEcccee
Confidence 347999999999999999964 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC----------Cc------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... +. ... +.++||||||+++|||++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 222 (289)
T 3og7_A 167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222 (289)
T ss_dssp -----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCC
Confidence 97543211 00 122 66899999999999999984
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-30 Score=269.21 Aligned_cols=179 Identities=21% Similarity=0.345 Sum_probs=143.9
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-----CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
...++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 82 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG---- 82 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe----
Confidence 3456899999999999999999995 4689999999975321 12357889999999999999999999884
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 83 ----~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~k 152 (346)
T 1ua2_A 83 ----HKSNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLK 152 (346)
T ss_dssp ----CTTCCEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred ----eCCceEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEE
Confidence 34558999999986 89998864 34568899999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++........ + .. +.++|||||||++|||++|.
T Consensus 153 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 210 (346)
T 1ua2_A 153 LADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210 (346)
T ss_dssp ECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred EEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCC
Confidence 9999999865322110 2 23 78899999999999999984
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=266.31 Aligned_cols=184 Identities=16% Similarity=0.251 Sum_probs=152.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||.||+++. .+++.||||++........+.+.+|+++++.++||||+++++++.... ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER----GAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE----TTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc----CCCc
Confidence 35688899999999999999995 678999999997654445678999999999999999999999986321 1345
Q ss_pred eEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 689999999999999999753 234678999999999999999999999 6999999999999999999999999998
Q ss_pred CccccCCC-----------------C--c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN-----------------T--L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~-----------------~--~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... + + ... +.++|||||||++|||++|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 243 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSS
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 86542100 0 0 112 77999999999999999984
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-30 Score=258.63 Aligned_cols=177 Identities=19% Similarity=0.311 Sum_probs=150.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|++++++++||||+++++++. .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 76 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ--------E 76 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE--------c
Confidence 46788899999999999999995 46899999999754322 2367889999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---eEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---AKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~ 603 (640)
+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 77 ~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 77 ESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred CCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 4568999999999999999865 3458999999999999999999999 69999999999999987655 9999
Q ss_pred CCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||++......... +.. +.++||||||+++|||++|.
T Consensus 151 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (284)
T 3kk8_A 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204 (284)
T ss_dssp CCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCC
Confidence 99999765432211 333 88999999999999999984
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-30 Score=260.26 Aligned_cols=178 Identities=21% Similarity=0.275 Sum_probs=148.8
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|...+.||+|+||.||+|+. .++..||+|.+..... ...+.+.+|++++++++||||+++++++..... ....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~~~ 103 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK----GKKC 103 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS----SCEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC----CCce
Confidence 55677899999999999985 5688999999975432 234678999999999999999999998864322 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeec-CCCceEEeCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLD-KALTAKLSGYN 606 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~-~~~~~kl~DfG 606 (640)
.++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++ +++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 8999999999999999975 3458999999999999999999998 56 99999999999998 78999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... ... +.++|||||||++|||++|.
T Consensus 178 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~ 226 (290)
T 1t4h_A 178 LATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp GGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CcccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCC
Confidence 99754332111 223 88999999999999999984
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-30 Score=269.16 Aligned_cols=176 Identities=19% Similarity=0.375 Sum_probs=144.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||+||+|+.. +++.||||+++..... ....+.+|++++++++||||+++++++. ...
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 73 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH--------TEK 73 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE--------CSS
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe--------eCC
Confidence 46888899999999999999954 6899999999754321 2234567999999999999999999985 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 74 SLTLVFEYLD-KDLKQYLDD--CGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp CEEEEEECCS-EEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEEEEecccc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCccc
Confidence 6899999997 599999875 24568999999999999999999999 79999999999999999999999999998
Q ss_pred ccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ + .. +.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 198 (324)
T 3mtl_A 148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198 (324)
T ss_dssp ECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 754321110 2 33 88999999999999999984
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=267.73 Aligned_cols=183 Identities=23% Similarity=0.406 Sum_probs=154.0
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC--------ChHHHHHHHHHHhcC-CCcccceee
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKL-RHRHLVSIL 513 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~ 513 (640)
+......++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344556678999999999999999999964 7999999999754321 135678999999999 799999999
Q ss_pred eEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCcee
Q 006570 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593 (640)
Q Consensus 514 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 593 (640)
+++. .....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+
T Consensus 167 ~~~~--------~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl 232 (365)
T 2y7j_A 167 DSYE--------SSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENIL 232 (365)
T ss_dssp EEEE--------BSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred EEEe--------eCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEE
Confidence 9885 34568999999999999999975 3468999999999999999999999 69999999999999
Q ss_pred ecCCCceEEeCCCCCccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 594 LDKALTAKLSGYNIPLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 594 l~~~~~~kl~DfGla~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++.++.+||+|||++......... ... +.++|||||||++|||+||.
T Consensus 233 ~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~ 302 (365)
T 2y7j_A 233 LDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS 302 (365)
T ss_dssp ECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred ECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCC
Confidence 999999999999998765432111 112 77999999999999999984
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=265.30 Aligned_cols=191 Identities=16% Similarity=0.224 Sum_probs=143.8
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++.....++|++.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++.++.++||||+++++++......
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 45566778999999999999999999995 468999999986543 3345677888889999999999999998753321
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhc-cCCCCCCCHHHHHHHHHHHHHHhhhcc--cCCCCCeeccCCCCCceeecC-CC
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTD-WKKKDMLKWPQRMAIIIGATRGVQFLH--TGVAPGIFGNNLKTENILLDK-AL 598 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiHrDlk~~NILl~~-~~ 598 (640)
. ......++||||+++ +|.+.+.. ......+++..+..++.|++.||+||| + .+|+||||||+|||++. ++
T Consensus 95 ~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 95 D-RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp C-TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTT
T ss_pred c-ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCC
Confidence 1 233457899999986 55554432 234567899999999999999999999 6 79999999999999997 89
Q ss_pred ceEEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ ... +.++|||||||++|||+||.
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~ 229 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229 (360)
T ss_dssp EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999865432211 233 88999999999999999984
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=263.74 Aligned_cols=172 Identities=15% Similarity=0.285 Sum_probs=147.9
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||+||+|+ ..+++.||||+++. ...+.+.+|++++++++ ||||+++++++... ...
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~------~~~ 106 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDP------VSR 106 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECT------TTC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccC------CCC
Confidence 568889999999999999998 46789999999873 34578999999999997 99999999988631 245
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGl 607 (640)
..++||||+++++|.++++. +++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+
T Consensus 107 ~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp CEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred ceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 68999999999999999853 7899999999999999999999 7999999999999999776 899999999
Q ss_pred CccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++|||||||++|||++|.
T Consensus 178 a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 228 (330)
T 3nsz_A 178 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228 (330)
T ss_dssp CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred ceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCC
Confidence 9765332211 2 33 88999999999999999984
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=8e-30 Score=265.34 Aligned_cols=181 Identities=22% Similarity=0.359 Sum_probs=144.8
Q ss_pred HHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC--CCcccceeeeEEEecccCCC
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL--RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~~~~~~ 524 (640)
....++|++.+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++.....
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~--- 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG--- 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG---
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC---
Confidence 344568999999999999999999975 8999999986432 34556666666655 89999999999864221
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCCc
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~~ 599 (640)
.....++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.
T Consensus 106 -~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 106 -SWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp -GGCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred -CCCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 22568999999999999999964 35899999999999999999999821 129999999999999999999
Q ss_pred eEEeCCCCCccccCCC------------Cc---------cCC-CC------ccceehhhHHHHHHhhc
Q 006570 600 AKLSGYNIPLPSKVRN------------TL---------SFH-TD------RSSLYKIILIICVITLC 639 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~------------~~---------~~~-~~------~~DvwS~Gvvl~elltG 639 (640)
+||+|||+++...... +. +.. .. ++|||||||++|||+||
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 9999999996542211 00 111 22 48999999999999998
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-30 Score=264.82 Aligned_cols=175 Identities=22% Similarity=0.376 Sum_probs=148.3
Q ss_pred CCCCCccccCCccceEEEEeC-----CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
|+..+.||+|+||+||++.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++... .
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~ 106 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA------G 106 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------T
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC------C
Confidence 377899999999999888642 578999999975432 2346789999999999999999999998632 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 107 AASLQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp TTEEEEEECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred CceEEEEEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcc
Confidence 4568999999999999999964 248999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||+||+
T Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~ 234 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 234 (318)
T ss_dssp GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99865432210 223 77899999999999999984
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=259.76 Aligned_cols=175 Identities=18% Similarity=0.314 Sum_probs=151.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+.|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++. ...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 93 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL--------KDT 93 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ETT
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe--------cCC
Confidence 5688889999999999999984 568999999997543 334578999999999999999999999886 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccc
Confidence 68999999999999999953 468999999999999999999999 69999999999999999999999999999
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... +.. +.++||||||+++|||++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 216 (303)
T 3a7i_A 167 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216 (303)
T ss_dssp EECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCC
Confidence 765332110 233 88999999999999999984
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-30 Score=268.12 Aligned_cols=174 Identities=19% Similarity=0.287 Sum_probs=145.5
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCC--cccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRH--RHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~~~~ 526 (640)
+.|++.+.||+|+||.||+|...+++.||||++...... ..+.+.+|++++++++| |||+++++++. .
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~--------~ 80 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI--------T 80 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------C
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe--------e
Confidence 468888999999999999999888999999999754322 23678999999999976 99999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++|||| .+|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||
T Consensus 81 ~~~~~lv~e~-~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 81 DQYIYMVMEC-GNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp SSEEEEEECC-CSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred CCEEEEEEeC-CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecc
Confidence 4578999995 57899999975 4568999999999999999999999 6999999999999997 5789999999
Q ss_pred CCccccCCCC----------c---------c-----------CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L---------S-----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~---------~-----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . + .. +.++|||||||++|||++|.
T Consensus 153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~ 217 (343)
T 3dbq_A 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217 (343)
T ss_dssp SSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSS
T ss_pred cccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence 9976532211 0 1 23 77899999999999999984
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=267.41 Aligned_cols=246 Identities=15% Similarity=0.072 Sum_probs=179.8
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.++++++.++. ++...+...+.|+.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 46678888776632 22211223478999999999998887889999999999999999998888888999999999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceee------------
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI------------ 222 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~------------ 222 (640)
++|.++...+..|.++++|++|+|++|.+++.+|. +..+++|++|+|++|++++.....+++|+.|+
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~ 204 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIP 204 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCC
Confidence 99999944444468999999999999999998886 89999999999999999865444444444444
Q ss_pred -------cccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEec
Q 006570 223 -------LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295 (640)
Q Consensus 223 -------l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l 295 (640)
+++|.++.. |.. ..++|+.|+|++|++++. ..+..+++|++|+|++|++++..|..+..+++|+.|++
T Consensus 205 ~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (390)
T 3o6n_A 205 IAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 279 (390)
T ss_dssp SSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEEC
Confidence 444444322 211 134677777777777653 45677777777777777777766777777777777777
Q ss_pred cCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 296 s~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++|++++ +|..+..+++|+.|++++|.+++.+
T Consensus 280 ~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~ 311 (390)
T 3o6n_A 280 SNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVE 311 (390)
T ss_dssp CSSCCCE-EECSSSCCTTCCEEECCSSCCCCCG
T ss_pred CCCcCcc-cCcccCCCCCCCEEECCCCcceecC
Confidence 7777764 4555566777777777777776543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-30 Score=268.66 Aligned_cols=177 Identities=19% Similarity=0.391 Sum_probs=144.2
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||+||+|+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------- 103 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-------- 103 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE--------
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe--------
Confidence 45679999999999999999998 45789999999975432 23456789999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee-----cCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL-----DKALTA 600 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl-----~~~~~~ 600 (640)
.....++||||+++ +|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+
T Consensus 104 ~~~~~~lv~e~~~~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 176 (329)
T 3gbz_A 104 HNHRLHLIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVL 176 (329)
T ss_dssp ETTEEEEEEECCSE-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEE
T ss_pred cCCEEEEEEecCCC-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceE
Confidence 34568999999984 99999975 3458999999999999999999999 699999999999999 455669
Q ss_pred EEeCCCCCccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++....... + + .. +.++|||||||++|||++|.
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 235 (329)
T 3gbz_A 177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235 (329)
T ss_dssp EECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999999875432110 0 2 33 89999999999999999984
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=262.91 Aligned_cols=186 Identities=17% Similarity=0.300 Sum_probs=143.9
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
...++|...+.||+|+||.||+|+.. ++..||+|+++.... ...+.+.+|++++++++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888899999999999999843 345899999975432 223678999999999999999999999863221
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhcc---CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDW---KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
......++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 111 ---~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 111 ---QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTS
T ss_pred ---cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCC
Confidence 1123569999999999999998532 234569999999999999999999998 6999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 599 TAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
.+||+|||+++....... + +.. +.++||||||+++|||++ |
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 246 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRG 246 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcC
Confidence 999999999976532211 0 233 789999999999999999 5
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-30 Score=274.72 Aligned_cols=180 Identities=18% Similarity=0.261 Sum_probs=145.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|+..+.||+|+||.||+|+. .+|+.||||++.... +...+|+++|++++||||+++++++...... .....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~--~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK--KDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETT--TTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCC--Cccee
Confidence 3577789999999999999996 468999999987543 2234799999999999999999998754322 23345
Q ss_pred EEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYNI 607 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DfGl 607 (640)
.++||||+++ ++.+++... .....+++..++.++.|+++||+|||+ .+|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchh
Confidence 7799999986 777766532 235679999999999999999999998 799999999999999965 6789999999
Q ss_pred CccccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ +. . +.++|||||||++|||++|.
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~ 254 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 9865322110 22 3 88999999999999999984
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=267.43 Aligned_cols=190 Identities=21% Similarity=0.338 Sum_probs=155.6
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCccccee
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSI 512 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l 512 (640)
+...++....++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455556678899999999999999999973 3468899999975432 2235789999999999 79999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCC
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVA 579 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 579 (640)
++++.. .+...++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+
T Consensus 97 ~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--- 166 (316)
T 2xir_A 97 LGACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 166 (316)
T ss_dssp EEEECC-------TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---
T ss_pred EEEEec-------CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---
Confidence 999852 23458999999999999999975322 1238899999999999999999999
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL- 638 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt- 638 (640)
.+|+||||||+||+++.++.+||+|||+++........ +.. +.++|||||||++|||+|
T Consensus 167 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~ 246 (316)
T 2xir_A 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246 (316)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999765332111 233 889999999999999998
Q ss_pred cC
Q 006570 639 CC 640 (640)
Q Consensus 639 G~ 640 (640)
|.
T Consensus 247 g~ 248 (316)
T 2xir_A 247 GA 248 (316)
T ss_dssp SC
T ss_pred CC
Confidence 63
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=258.85 Aligned_cols=180 Identities=20% Similarity=0.286 Sum_probs=148.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|.+.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 77 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN------ 77 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC------
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc------
Confidence 46899999999999999999995 568899999997532 2345789999999999999999999998852
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+.....++||||+++| |.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 78 ~~~~~~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 78 EEKQKMYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp C---CEEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred CCCCeEEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeec
Confidence 1345689999999876 87877652 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC----------c---------c-CC--CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L---------S-FH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~---------~-~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
||++........ . + .. +.++||||||+++|||++|.
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 210 (305)
T 2wtk_C 153 LGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210 (305)
T ss_dssp CTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSS
T ss_pred cccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCC
Confidence 999976532110 0 1 12 67899999999999999984
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-30 Score=261.14 Aligned_cols=175 Identities=15% Similarity=0.324 Sum_probs=144.9
Q ss_pred CCCCCccccCCccceEEEEeC-CC---cEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DG---SRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
|...+.||+|+||+||+|+.. ++ ..||+|.+..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 95 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP-------PE 95 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC-------SS
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec-------CC
Confidence 445688999999999999842 22 3799999875332 234678999999999999999999999852 22
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+.+|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~ 170 (298)
T 3pls_A 96 GLPHVLLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGL 170 (298)
T ss_dssp SCCEEEECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTS
T ss_pred CCcEEEEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCC
Confidence 335899999999999999974 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCC--------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 608 PLPSKVRNT--------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 608 a~~~~~~~~--------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++....... . +.. +.++||||||+++|||+||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 224 (298)
T 3pls_A 171 ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTR 224 (298)
T ss_dssp SCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhC
Confidence 975432110 0 233 8899999999999999996
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-29 Score=251.15 Aligned_cols=229 Identities=18% Similarity=0.134 Sum_probs=134.5
Q ss_pred cEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCC
Q 006570 69 KIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFW 148 (640)
Q Consensus 69 gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 148 (640)
++.|.....+.++.++++++... ......++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|..++
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~~ip----~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQAVP----VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp TCEEECSSSCEEECCSSCCSSCC----TTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CceECCCCCeEEEcCcCCcccCC----cCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 47786544466777777663321 11124666777777766665556667777777777777777666666677777
Q ss_pred CCCEEEcccCc-ccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeec
Q 006570 149 SLEVLNISSNF-IYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVIL 223 (640)
Q Consensus 149 ~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l 223 (640)
+|++|+|++|. +....|..|.++++|++|+|++|.+++.+|. +.++++|++|+|++|++++..+.. +++|+.|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 77777777775 5544466666677777777777777666555 666666666666666665444332 345555555
Q ss_pred ccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCc
Q 006570 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 555555444444555555555555555555444555555555555555555555433344455555555555555544
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-30 Score=265.04 Aligned_cols=177 Identities=21% Similarity=0.341 Sum_probs=146.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~ 95 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK--------K 95 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------E
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee--------c
Confidence 356888999999999999999954 5899999998654322 2356789999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 96 KKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp TTEEEEEEECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCC
Confidence 4568999999999999888753 4468999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +. . +.++|||||||++|||++|.
T Consensus 170 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 222 (331)
T 4aaa_A 170 FARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222 (331)
T ss_dssp TC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred CceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCC
Confidence 99764322110 22 3 88999999999999999984
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-30 Score=279.31 Aligned_cols=177 Identities=18% Similarity=0.305 Sum_probs=146.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.+.|+..+.||+|+||+||+|+. .++..||+|++.... ....+.+.+|+++++.++||||+++++++. .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~ 107 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE--------D 107 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------e
Confidence 34688899999999999999995 468899999997543 334578999999999999999999999985 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~ 603 (640)
....++|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.. +.+||+
T Consensus 108 ~~~~~lv~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 108 KRNYYLVMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEE
Confidence 4568999999999999999865 3458999999999999999999999 699999999999999764 559999
Q ss_pred CCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++........ ... +.++||||+||++|||++|.
T Consensus 182 DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~ 234 (494)
T 3lij_A 182 DFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGY 234 (494)
T ss_dssp CCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCC
Confidence 99999765432211 334 88999999999999999984
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-30 Score=276.14 Aligned_cols=180 Identities=18% Similarity=0.285 Sum_probs=149.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... ...+++.+|++++++++||||+++++++.... ...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~ 101 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD---LLK 101 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC---TTT
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC---CCc
Confidence 36788899999999999999994 5688999999975322 23467899999999999999999999885321 112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||++ |+|.++++. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 256899999996 599999964 4569999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCC------------------------------C--c--------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRN------------------------------T--L--------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~------------------------------~--~--------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+++...... + + ... +.++||||+||++|||++|
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g 248 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence 998653211 0 0 233 8899999999999999985
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=266.37 Aligned_cols=177 Identities=19% Similarity=0.347 Sum_probs=143.9
Q ss_pred cCCCCCCccccCCccceEEEEeCC-----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD-----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||.||+|+... +..||||+++.... ...+++.+|++++++++||||+++++++.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------- 116 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS------- 116 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-------
Confidence 456667899999999999998542 23699999975432 23457899999999999999999999884
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 117 -~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 117 -KYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp -SSSSEEEEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECC
T ss_pred -cCCCcEEEEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECC
Confidence 34568999999999999999975 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++....... . ... +.++|||||||++|||+| |.
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 248 (333)
T 1mqb_A 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 248 (333)
T ss_dssp CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence 999986532210 1 233 889999999999999998 63
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-30 Score=272.01 Aligned_cols=181 Identities=17% Similarity=0.216 Sum_probs=144.8
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.+|+..+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...... ......
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~--~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDK--KDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSS--SSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCC--CCceEE
Confidence 46888999999999999999987777799998864332 224799999999999999999998754321 234457
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec-CCCceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DfGla~ 609 (640)
++||||++++.+....+.......+++..+..++.|+++||+|||+ .+|+||||||+|||++ .++.+||+|||+++
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 8999999874433333222235678999999999999999999999 7999999999999999 78999999999997
Q ss_pred cccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ + .. +.++|||||||++|||++|.
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 239 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 65322110 2 23 88999999999999999984
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-30 Score=258.81 Aligned_cols=177 Identities=23% Similarity=0.365 Sum_probs=150.5
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++. .+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 77 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR--------EG 77 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------ET
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE--------cC
Confidence 456888999999999999999954 689999999975432 34578899999999999999999999885 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 78 NIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp TEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCC
Confidence 568999999999999999953 4568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC----------Cc---------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL---------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~---------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... +. + .. +.++||||||+++|||++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 205 (276)
T 2yex_A 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205 (276)
T ss_dssp CEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCC
Confidence 97542111 00 1 22 56899999999999999984
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-30 Score=272.58 Aligned_cols=177 Identities=18% Similarity=0.314 Sum_probs=150.0
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .+.
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 104 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--------SDG 104 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE--------ETT
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE--------ECC
Confidence 56888899999999999999954 68999999997542 223467899999999999999999999886 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ...+++..+..++.+++.||+|||+. .+|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEECCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 68999999999999999975 34589999999999999999999972 28999999999999999999999999998
Q ss_pred ccccCCC------C---c------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN------T---L------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~------~---~------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... + . +.. +.++|||||||++|||+||.
T Consensus 180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 227 (360)
T 3eqc_A 180 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227 (360)
T ss_dssp HHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 6432111 0 0 334 88999999999999999984
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-30 Score=262.39 Aligned_cols=176 Identities=21% Similarity=0.396 Sum_probs=143.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~ 89 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGG 89 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECC-------C--C
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------CCCc
Confidence 457888999999999999999874 8899999997432 45789999999999999999999998752 2345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 165 (278)
T 1byg_A 90 LYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165 (278)
T ss_dssp CEEEECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred eEEEEecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccc
Confidence 79999999999999999752 12237899999999999999999999 699999999999999999999999999997
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
........ +.. +.++||||||+++|||+| |
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g 211 (278)
T 1byg_A 166 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 211 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCC
Confidence 65432111 233 889999999999999998 6
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-30 Score=267.30 Aligned_cols=189 Identities=22% Similarity=0.364 Sum_probs=153.5
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
++....++|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+++++++ +||||+++++++.....
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~- 95 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP- 95 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC-
Confidence 3344567889999999999999999995 578999999997543 3457899999999999 89999999999874221
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+......++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 96 -~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 96 -PGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEE
T ss_pred -ccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEE
Confidence 11245789999999999999999753 23568999999999999999999999 69999999999999999999999
Q ss_pred eCCCCCccccCCCC--------c--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT--------L--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~--------~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||++........ . ... +.++|||||||++|||+||.
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 231 (326)
T 2x7f_A 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231 (326)
T ss_dssp CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSS
T ss_pred eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCC
Confidence 99999876532210 0 122 78999999999999999984
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=261.16 Aligned_cols=177 Identities=19% Similarity=0.291 Sum_probs=146.6
Q ss_pred hcCCCCCCccccCCccceEEEEeCC----CcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|...+.||+|+||.||+|+..+ +..||+|.+.... ....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------- 83 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------- 83 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-------
Confidence 4568888999999999999998532 3469999997542 223567899999999999999999999873
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 84 --~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 84 --EEPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECC
T ss_pred --CCCCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCc
Confidence 12358999999999999999752 3458999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++....... + +.. +.++||||||+++|||+| |.
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~ 212 (281)
T 3cc6_A 157 FGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212 (281)
T ss_dssp CCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCC
Confidence 999976543211 0 233 889999999999999998 63
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-30 Score=266.25 Aligned_cols=176 Identities=19% Similarity=0.397 Sum_probs=143.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE----EEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR----VSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||.||+|+. .+++. ||+|.+... .....+++.+|++++++++||||+++++++..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 88 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES------
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec------
Confidence 5688899999999999999994 34543 577777543 33456889999999999999999999999862
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++|+||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 89 ---~~~~~v~~~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 89 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ---SSEEEEECCCSSCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECC
T ss_pred ---CCceEEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEcc
Confidence 237899999999999999975 24568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++....... + +.. +.++|||||||++|||++ |.
T Consensus 161 fG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~ 217 (327)
T 3lzb_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217 (327)
T ss_dssp TTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCC
Confidence 999986532211 1 233 889999999999999998 63
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=269.58 Aligned_cols=174 Identities=18% Similarity=0.327 Sum_probs=145.2
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+|++++.++ +||||+++++++. +
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~--------~ 87 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYD--------D 87 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEE--------C
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEE--------c
Confidence 346788899999999999999995 4688999999975433 245688888887 7999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC----CceEE
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA----LTAKL 602 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~----~~~kl 602 (640)
+...|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+.++ +.+||
T Consensus 88 ~~~~~lv~E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 88 GKYVYVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp SSEEEEEECCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred CCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEE
Confidence 5678999999999999999964 4568999999999999999999999 699999999999998443 35999
Q ss_pred eCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 162 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 217 (342)
T 2qr7_A 162 CDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY 217 (342)
T ss_dssp CCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred EECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCC
Confidence 999999865332110 222 78999999999999999984
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-30 Score=289.20 Aligned_cols=169 Identities=20% Similarity=0.367 Sum_probs=143.5
Q ss_pred CccccCCccceEEEEe---CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL---TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|.+ ..++.||||+++.... ...+++.+|+++|++++||||++++++|. .+..+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~---------~~~~~ 445 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE---------AESWM 445 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE---------SSSEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe---------cCCEE
Confidence 4799999999999964 2467899999976432 33578999999999999999999999884 12378
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+|||||++|+|.++++. ...+++..++.|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++..
T Consensus 446 lv~E~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EEEEccCCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 99999999999999974 4568999999999999999999999 79999999999999999999999999999765
Q ss_pred cCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 612 KVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 612 ~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
..... + ... +.++|||||||++|||+| |.
T Consensus 520 ~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~ 570 (635)
T 4fl3_A 520 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 570 (635)
T ss_dssp TC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 33211 0 224 889999999999999998 63
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-29 Score=262.39 Aligned_cols=182 Identities=15% Similarity=0.269 Sum_probs=144.3
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC------C
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD------H 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------~ 523 (640)
++|...+.||+|+||.||+|+.. +++.||||++........+++.+|++++++++||||+++++++...... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888899999999999999964 5899999999765544557889999999999999999999987422110 1
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec-CCCceEE
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKL 602 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl 602 (640)
.......++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++ +++.+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEE
Confidence 123467899999997 699999953 458999999999999999999999 6999999999999997 5679999
Q ss_pred eCCCCCccccCCC-----------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN-----------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~-----------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++...... + . . .. +.++|||||||++|||+||.
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 222 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCC
Confidence 9999998653211 0 0 2 33 88999999999999999984
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=258.92 Aligned_cols=175 Identities=15% Similarity=0.148 Sum_probs=148.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++++ +|+|++++++++. .+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--------~~ 78 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ--------EG 78 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE--------ET
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecC--------CC
Confidence 35688899999999999999994 678999999986432 335688999999999 7999999999875 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-----eEE
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-----AKL 602 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl 602 (640)
...++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||
T Consensus 79 ~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 79 LHNVLVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred ceeEEEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 5689999999 99999999752 3458999999999999999999998 79999999999999988776 999
Q ss_pred eCCCCCccccCCCC---------------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT---------------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~---------------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++....... . +.. +.++|||||||++|||++|.
T Consensus 153 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 215 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 215 (298)
T ss_dssp CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred EECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCC
Confidence 99999976543211 0 233 88999999999999999984
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=260.27 Aligned_cols=176 Identities=18% Similarity=0.336 Sum_probs=147.2
Q ss_pred cCCCCCC-ccccCCccceEEEEeC---CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTN-LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|.+.+ .||+|+||.||+|+.. ++..||||+++.... ...+++.+|++++++++||||+++++++.
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------- 80 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-------- 80 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--------
Confidence 3444555 8999999999999853 577899999976432 23567899999999999999999999883
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 81 -~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 81 -AEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp -SSSEEEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCC
T ss_pred -CCCcEEEEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcc
Confidence 1347999999999999999964 34568999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|+++....... . +.. +.++||||||+++|||+| |.
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 211 (287)
T 1u59_A 155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211 (287)
T ss_dssp TTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred cceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 99976532211 0 233 889999999999999998 63
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=277.94 Aligned_cols=177 Identities=17% Similarity=0.288 Sum_probs=148.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-------------CChHHHHHHHHHHhcCCCcccceeeeE
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-------------HLPQSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
.++|.+.+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 46789999999999999999995 4588999999975321 335678999999999999999999999
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+. .....++|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++
T Consensus 115 ~~--------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 115 FE--------DKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLE 180 (504)
T ss_dssp EE--------CSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEES
T ss_pred EE--------cCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEe
Confidence 85 45678999999999999999965 3458999999999999999999999 6999999999999998
Q ss_pred CCC---ceEEeCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KAL---TAKLSGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~---~~kl~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++ .+||+|||+++........ ... +.++||||+||++|||++|.
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~ 244 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGY 244 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCC
Confidence 775 6999999999765432111 334 88999999999999999984
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-31 Score=278.58 Aligned_cols=187 Identities=14% Similarity=0.178 Sum_probs=142.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHH---HHHhcCCCcccceeeeEEEec---
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHV---ELLSKLRHRHLVSILGHCILT--- 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~g~~~~~--- 519 (640)
.++|...+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+ +.+++++||||+++++.+...
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677889999999999999995 56999999999743 223457889999 556666899999998443210
Q ss_pred ccCCC--------CCCC-----eEEEEEEccCCCCHhHHhhccCC----CCCCCHHHHHHHHHHHHHHhhhcccCCCCCe
Q 006570 520 YQDHP--------NTGS-----TVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGI 582 (640)
Q Consensus 520 ~~~~~--------~~~~-----~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 582 (640)
.++.. .++. ..++||||+ +|+|.+++..... ...+++..++.|+.|++.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 00100 0011 378999999 6899999975321 1234468888999999999999999 699
Q ss_pred eccCCCCCceeecCCCceEEeCCCCCccccCCC------Cc-------cC-----------C-CCccceehhhHHHHHHh
Q 006570 583 FGNNLKTENILLDKALTAKLSGYNIPLPSKVRN------TL-------SF-----------H-TDRSSLYKIILIICVIT 637 (640)
Q Consensus 583 iHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~------~~-------~~-----------~-~~~~DvwS~Gvvl~ell 637 (640)
+||||||+|||++.++.+||+|||+++...... .+ +. . +.++|||||||++|||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 999999999999999999999999997543211 01 22 4 88999999999999999
Q ss_pred hcC
Q 006570 638 LCC 640 (640)
Q Consensus 638 tG~ 640 (640)
||.
T Consensus 308 tg~ 310 (377)
T 3byv_A 308 CAD 310 (377)
T ss_dssp HSS
T ss_pred HCC
Confidence 984
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-30 Score=256.94 Aligned_cols=177 Identities=20% Similarity=0.316 Sum_probs=151.1
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|.+.+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 81 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-------- 81 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe--------
Confidence 357888999999999999999964 7899999999753 2344578999999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 82 TPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeec
Confidence 34568999999999999999975 2458999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +. . +.++||||||+++|||++|.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 208 (276)
T 2h6d_A 156 GLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208 (276)
T ss_dssp CGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCC
Confidence 999765432110 12 2 57899999999999999984
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-30 Score=263.55 Aligned_cols=178 Identities=16% Similarity=0.307 Sum_probs=148.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.+.|++.+.||+|+||.||+|+.. +++.||+|++........+++.+|++++++++||||+++++++. ...
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 89 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY--------HDG 89 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------CC-
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeee--------eCC
Confidence 467888999999999999999964 58899999998666666788999999999999999999999986 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 689999999999999998642 3458999999999999999999999 69999999999999999999999999987
Q ss_pred ccccC--------CCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKV--------RNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~--------~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... ..+. ... +.++||||||+++|||++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 219 (302)
T 2j7t_A 165 AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219 (302)
T ss_dssp HHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCC
Confidence 43210 0000 122 78999999999999999984
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=259.42 Aligned_cols=172 Identities=18% Similarity=0.312 Sum_probs=145.9
Q ss_pred cCCCCC-CccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHH-hcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPT-NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELL-SKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|... +.||+|+||.||+|+. .+++.||+|+++. ...+.+|++++ +..+||||+++++++..... ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~----~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA----GR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC----CC
Confidence 456665 7799999999999995 5689999999963 25678888888 55699999999998863221 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...++||||+++|+|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHH-CTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEec
Confidence 568999999999999999986 233569999999999999999999999 79999999999999998 78999999
Q ss_pred CCCCccccCCCCccCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTLSFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||++.... +.. +.++|||||||++|||+||.
T Consensus 164 fg~a~~~~-----~~~~~~~~DiwslG~il~el~tg~ 195 (299)
T 3m2w_A 164 FGFAKETT-----GEKYDKSCDMWSLGVIMYILLCGY 195 (299)
T ss_dssp CTTCEECT-----TCGGGGHHHHHHHHHHHHHHHHSS
T ss_pred cccccccc-----cccCCchhhHHHHHHHHHHHHHCC
Confidence 99997653 233 88999999999999999984
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=277.98 Aligned_cols=177 Identities=20% Similarity=0.333 Sum_probs=150.6
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|++.+.||+|+||+||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++. .
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~ 92 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE--------D 92 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE--------c
Confidence 35688899999999999999995 47899999999653 2345678999999999999999999999985 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec---CCCceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl~ 603 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 166 (486)
T 3mwu_A 93 SSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKII 166 (486)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEEC
T ss_pred CCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEE
Confidence 5668999999999999999865 3458999999999999999999999 6999999999999995 45689999
Q ss_pred CCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++........ ... +.++||||+||++|||++|.
T Consensus 167 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~ 219 (486)
T 3mwu_A 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219 (486)
T ss_dssp SCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999765432211 223 78999999999999999984
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=279.36 Aligned_cols=177 Identities=20% Similarity=0.362 Sum_probs=152.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------- 96 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-------- 96 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------
Confidence 35688899999999999999995 478999999997542 345678999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl 602 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 97 DKGYFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred eCCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEE
Confidence 45678999999999999999964 4568999999999999999999999 699999999999999 56789999
Q ss_pred eCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ ... +.++||||+||++|||++|+
T Consensus 171 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~ 224 (484)
T 3nyv_A 171 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGC 224 (484)
T ss_dssp CCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCC
Confidence 999998765433211 224 88999999999999999985
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-30 Score=264.66 Aligned_cols=179 Identities=23% Similarity=0.402 Sum_probs=147.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE--EEEEEeecc-cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR--VSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+. .++.. ||+|.++.. .....+.+.+|+++++++ +||||+++++++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-------- 96 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-------- 96 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE--------
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee--------
Confidence 5688889999999999999995 45664 499998753 233456799999999999 8999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.....++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+ .+|+||||||+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NI 173 (327)
T 1fvr_A 97 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNI 173 (327)
T ss_dssp ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred eCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceE
Confidence 3456899999999999999997532 13468999999999999999999999 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCCC---------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |.
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 239 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 239 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred EEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCC
Confidence 999999999999999874322111 0 233 889999999999999998 63
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=260.95 Aligned_cols=182 Identities=20% Similarity=0.303 Sum_probs=150.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 78 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------T 78 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG------G
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC------C
Confidence 35788889999999999999995 4689999999975432 2346789999999999999999999988632 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCC-----eeccCCCCCceeecCCCce
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPG-----IFGNNLKTENILLDKALTA 600 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----iiHrDlk~~NILl~~~~~~ 600 (640)
....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~ 155 (279)
T 2w5a_A 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNV 155 (279)
T ss_dssp GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCE
T ss_pred CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCE
Confidence 356899999999999999997532 24558999999999999999999998 46 9999999999999999999
Q ss_pred EEeCCCCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++....... . +.. +.++||||||+++|||+||.
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 213 (279)
T 2w5a_A 156 KLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213 (279)
T ss_dssp EECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSS
T ss_pred EEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999999876543211 0 233 88999999999999999984
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-30 Score=261.99 Aligned_cols=180 Identities=16% Similarity=0.281 Sum_probs=144.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.... ...+++.+|++++++++||||+++++++..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------- 103 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE------- 103 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------
Confidence 35688899999999999999994 5789999999975332 234678899999999999999999999862
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 104 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 104 -DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp -TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECC
T ss_pred -CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEe
Confidence 346899999999999999996422 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++||||||+++|||++|.
T Consensus 180 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~ 233 (310)
T 2wqm_A 180 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233 (310)
T ss_dssp C------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9998765332110 233 88999999999999999984
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=259.51 Aligned_cols=177 Identities=19% Similarity=0.325 Sum_probs=146.8
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..++|+..+.||+|+||.||+|+.. +|+.||||.+.... ..+++.+|++++++++||||+++++++. ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 96 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF--------KN 96 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEE--------ET
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEE--------eC
Confidence 4567889999999999999999954 58999999997543 3578999999999999999999999886 23
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ....+++..+..++.+++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 97 TDLWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp TEEEEEEECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEeecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 468999999999999999963 24568999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+......... +.. +.++||||||+++|||++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 222 (314)
T 3com_A 172 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222 (314)
T ss_dssp CEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSS
T ss_pred chhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCC
Confidence 9765332110 233 88999999999999999984
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-30 Score=267.17 Aligned_cols=179 Identities=17% Similarity=0.179 Sum_probs=142.5
Q ss_pred cCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccCC-----------ChHHHHHHHHHHhcCCCcccceeeeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRH-----------LPQSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
++|.+.+.||+|+||.||+|+.. ++..||||+....... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999964 5778999998754321 12346788889999999999999999
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+...+. .....++||||+ +|+|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+|||++
T Consensus 117 ~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTEFK----GRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEESS----SCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred cccccC----CCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEc
Confidence 874322 356789999999 99999999752 368999999999999999999999 6999999999999999
Q ss_pred CCC--ceEEeCCCCCccccCCC---------------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KAL--TAKLSGYNIPLPSKVRN---------------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~--~~kl~DfGla~~~~~~~---------------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++ .+||+|||+++...... +. +.. +.++|||||||++|||+||.
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~ 257 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGK 257 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 887 99999999997542211 00 334 88999999999999999984
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-30 Score=261.75 Aligned_cols=176 Identities=19% Similarity=0.354 Sum_probs=145.9
Q ss_pred hcCCCCCC-ccccCCccceEEEEe---CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 450 TNNFDPTN-LIGEGSQGQLYKGFL---TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 450 ~~~~~~~~-~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
.++|.+.+ .||+|+||.||+|.. .+++.||||+++..... ..+++.+|+++++.++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------ 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------
Confidence 35566667 899999999999963 34678999999754322 2467999999999999999999999883
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
....++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 89 ---~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 89 ---AESWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp ---SSSEEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEEC
T ss_pred ---CCCcEEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEc
Confidence 2347999999999999999975 3458999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 604 GYNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|||+++........ +.. +.++||||||+++|||+| |.
T Consensus 160 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 218 (291)
T 1xbb_A 160 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 218 (291)
T ss_dssp CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCC
Confidence 99999765332110 223 779999999999999998 63
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=255.56 Aligned_cols=255 Identities=19% Similarity=0.172 Sum_probs=222.1
Q ss_pred CCCCCCCcccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcE
Q 006570 60 CYLPSSSSLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKV 128 (640)
Q Consensus 60 C~~~~~~~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~ 128 (640)
|.|. .+.|+. .+++.|++++|.++.. ++..+...+.|+.|+|++|.+.+..|..|.++++|++
T Consensus 33 c~l~-----~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 106 (332)
T 2ft3_A 33 CHLR-----VVQCSDLGLKAVPKEISPDTTLLDLQNNDISEL-RKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQK 106 (332)
T ss_dssp EETT-----EEECCSSCCSSCCSCCCTTCCEEECCSSCCCEE-CTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCE
T ss_pred ccCC-----EEECCCCCccccCCCCCCCCeEEECCCCcCCcc-CHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCE
Confidence 5565 688853 2688999999988543 2223445689999999999999888999999999999
Q ss_pred eecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCc--cCCC-ccCcCcCCeeEccCC
Q 006570 129 LSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG--SVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 129 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~-~~~l~~L~~L~L~~N 205 (640)
|+|++|.++ .+|..+. ++|++|+|++|.+++..+..|.++++|+.|++++|.++. ..+. +..+ +|++|++++|
T Consensus 107 L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 107 LYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp EECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred EECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 999999996 6777665 899999999999997666679999999999999999974 5555 7777 9999999999
Q ss_pred CCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 206 ~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
++++......++|+.|++++|++++..|..|.++++|+.|+|++|++++..|..+..+++|++|+|++|+++ .+|..+.
T Consensus 183 ~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 183 KLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp BCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred CCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 999866666789999999999999888899999999999999999999988889999999999999999998 5888899
Q ss_pred CCCCCCEEeccCccCcccCCCCccCC------CCCceeeecccccc
Q 006570 286 CSAKLNFVEISHNLLIGKLPSCIGSN------SLNRTVVSTWNCLS 325 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~~p~~~~~~------~~l~~l~l~~N~l~ 325 (640)
.+++|+.|++++|++++..+..|... ..++.+++++|.+.
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 99999999999999998777777653 56889999999876
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=271.25 Aligned_cols=251 Identities=20% Similarity=0.161 Sum_probs=175.3
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
+++.|+|++|.+++.. +..+...+.|++|+|++|.+....+..|.++++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 57 ~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 57 HLEELELNENIVSAVE-PGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TCCEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCEEECCCCccCEeC-hhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 4556666666553321 111223355555666555555444445555555555555555555555555555555555555
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCC-------------------------ccCcCcCCeeEccCCCCCCC
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-------------------------LQRLVLLEELNLGGNDFGPK 210 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-------------------------~~~l~~L~~L~L~~N~l~~~ 210 (640)
++|.+.+..|..|.++++|+.|+|++|++++.++. |..+++|++|++++|.+.+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 55555555555555555555555555555554443 44445555555555444443
Q ss_pred CCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCC
Q 006570 211 FPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287 (640)
Q Consensus 211 ~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 287 (640)
+|.. ..+|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+
T Consensus 216 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 295 (477)
T 2id5_A 216 MTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 295 (477)
T ss_dssp ECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTC
T ss_pred cCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCc
Confidence 3332 2378888899999986555688999999999999999998888899999999999999999999999999999
Q ss_pred CCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 288 AKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 288 ~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++|+.|+|++|+|++..+..|..+++|+.+++++|.+...
T Consensus 296 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 296 NYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp TTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred ccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 9999999999999988888889999999999999998764
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-30 Score=263.87 Aligned_cols=176 Identities=19% Similarity=0.286 Sum_probs=145.2
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--------CChHHHHHHHHHHhcCCCcccceeeeEEEecc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--------HLPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 520 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--- 85 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--- 85 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc---
Confidence 45688899999999999999995 4688999999864321 12345889999999999999999999874
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT- 599 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~- 599 (640)
. ...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 86 -----~-~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 86 -----A-EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp -----S-SSEEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSS
T ss_pred -----C-CceEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCC
Confidence 1 237999999999999999964 4568999999999999999999999 69999999999999987654
Q ss_pred --eEEeCCCCCccccCCCC---------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 --AKLSGYNIPLPSKVRNT---------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 --~kl~DfGla~~~~~~~~---------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++....... + ... +.++|||||||++|||++|.
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 216 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216 (322)
T ss_dssp CCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSS
T ss_pred CeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999986543210 0 123 78999999999999999984
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=257.88 Aligned_cols=178 Identities=22% Similarity=0.358 Sum_probs=150.9
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---------CChHHHHHHHHHHhcCC-CcccceeeeEEE
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---------HLPQSLMQHVELLSKLR-HRHLVSILGHCI 517 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~g~~~ 517 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 356788999999999999999995 4689999999975431 12356789999999995 999999999885
Q ss_pred ecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 95 --------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 95 --------TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDD 160 (298)
T ss_dssp --------CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTT
T ss_pred --------cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCC
Confidence 34668999999999999999975 3468999999999999999999999 799999999999999999
Q ss_pred CceEEeCCCCCccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 LTAKLSGYNIPLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||++......... ... +.++||||||+++|||++|.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 226 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226 (298)
T ss_dssp CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCC
Confidence 99999999999765332111 112 77999999999999999984
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=268.88 Aligned_cols=174 Identities=19% Similarity=0.287 Sum_probs=144.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCC--CcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~~~~ 526 (640)
..|++.+.||+|+||.||+|...+++.||||++..... ...+.+.+|++++++++ ||||+++++++. .
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~--------~ 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI--------T 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------C
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe--------c
Confidence 35888999999999999999987799999999975432 23467899999999996 599999999886 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||| +.+|+|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||
T Consensus 128 ~~~~~lv~E-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 128 DQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp SSEEEEEEE-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred CCEEEEEEe-cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecC
Confidence 456899999 567899999975 3468899999999999999999998 6999999999999995 5889999999
Q ss_pred CCccccCCCC----------c---------c-----------CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L---------S-----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~---------~-----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . + .. +.++|||||||++|||++|.
T Consensus 200 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~ 264 (390)
T 2zmd_A 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264 (390)
T ss_dssp SSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCC
Confidence 9986532210 0 1 13 77899999999999999984
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=267.18 Aligned_cols=180 Identities=16% Similarity=0.260 Sum_probs=144.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++.++||||+++++++.... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK--SLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC--STTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccc--cccc
Confidence 35788899999999999999984 4688999999975322 22457889999999999999999999885321 1123
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++ +|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 3578999999975 89888852 48899999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 223 (371)
T 2xrw_A 173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223 (371)
T ss_dssp C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 99865432110 333 88999999999999999984
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-30 Score=269.34 Aligned_cols=181 Identities=17% Similarity=0.297 Sum_probs=134.9
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+ ..+|+.||||++..... ...+.+.+|+++++.++||||+++++++.... ....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR--SLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS--SGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--cccc
Confidence 3678889999999999999998 45689999999965322 23467889999999999999999999885311 1112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 34579999999 6799998853 468999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ + .. +.++||||+||++|||++|.
T Consensus 178 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 227 (367)
T 2fst_X 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 99865432111 2 34 88999999999999999984
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=262.48 Aligned_cols=182 Identities=21% Similarity=0.343 Sum_probs=149.0
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhc--CCCcccceeeeEEEecccCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK--LRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~~ 523 (640)
-....++|+..+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~--- 109 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN--- 109 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC---
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC---
Confidence 344567899999999999999999998 4899999999743 34678889988887 78999999999986321
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCC
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~ 598 (640)
......++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||... ..+|+||||||+||+++.++
T Consensus 110 -~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 110 -GTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp -SSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred -CccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence 112368999999999999999964 35899999999999999999999210 17999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC------------c---------cC------C-CCccceehhhHHHHHHhhc
Q 006570 599 TAKLSGYNIPLPSKVRNT------------L---------SF------H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~------------~---------~~------~-~~~~DvwS~Gvvl~elltG 639 (640)
.+||+|||+++....... . +. . +.++|||||||++|||+||
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 999999999975533210 0 11 1 3689999999999999998
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-30 Score=262.42 Aligned_cols=181 Identities=17% Similarity=0.336 Sum_probs=136.8
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..++|...+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++. .
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 84 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV--------V 84 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE--------S
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe--------e
Confidence 457889999999999999999984 468899999986543 234567889999999999999999999886 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhcc-----CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDW-----KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
....++||||+++|+|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEE
T ss_pred cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEE
Confidence 34589999999999999999641 124568999999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCC-------------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN-------------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~-------------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||++....... + . . .. +.++|||||||++|||+||.
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 224 (303)
T 2vwi_A 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224 (303)
T ss_dssp ECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCC
Confidence 99999886542210 0 0 1 33 88999999999999999984
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-30 Score=267.61 Aligned_cols=181 Identities=20% Similarity=0.335 Sum_probs=150.0
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC-CC-----cEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT-DG-----SRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
...++|+..+.||+|+||.||+|+.. ++ ..||+|.++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-- 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe--
Confidence 34567888999999999999999853 22 4799999975432 2346789999999999 8999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccC-----------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
.+...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 121 ------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlk 191 (333)
T 2i1m_A 121 ------HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVA 191 (333)
T ss_dssp ------SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred ------cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcc
Confidence 3455899999999999999997531 13468999999999999999999999 699999999
Q ss_pred CCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 263 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred cceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999986532211 0 233 889999999999999998 5
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=265.15 Aligned_cols=179 Identities=13% Similarity=0.202 Sum_probs=150.9
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCC-----------------hHHHHHHHHHHhcCCCccccee
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL-----------------PQSLMQHVELLSKLRHRHLVSI 512 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 512 (640)
.++|++.+.||+|+||.||+|+. +++.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999999999 89999999997542211 1789999999999999999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHH------hhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY------LTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
++++. ..+..++||||+++|+|.++ +.. .....+++..++.++.|++.||+|||+. .+|+|||
T Consensus 109 ~~~~~--------~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~d 177 (348)
T 2pml_X 109 EGIIT--------NYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRD 177 (348)
T ss_dssp SEEEE--------SSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCC
T ss_pred EEEEe--------eCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecC
Confidence 99986 34568999999999999999 543 2256799999999999999999999972 5999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCCc---------------cC-C-CC-ccceehhhHHHHHHhhcC
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNTL---------------SF-H-TD-RSSLYKIILIICVITLCC 640 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~---------------~~-~-~~-~~DvwS~Gvvl~elltG~ 640 (640)
|||+||+++.++.+||+|||++......... +. . +. ++|||||||++|||++|.
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 249 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred CChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999764322100 22 2 34 999999999999999984
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=261.69 Aligned_cols=182 Identities=18% Similarity=0.247 Sum_probs=150.4
Q ss_pred HHHhcCCCCC-CccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 447 EEATNNFDPT-NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 447 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
+...+.|.+. +.||+|+||.||+|+. .+++.||+|+++... .....++.+|+.++..+ +||||+++++++.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~---- 99 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE---- 99 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE----
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE----
Confidence 3445566666 8899999999999995 468999999997543 23457899999999999 5699999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CC
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---AL 598 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~ 598 (640)
.....++||||+++|+|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++
T Consensus 100 ----~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 100 ----NTSEIILILEYAAGGEIFSLCLP-ELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp ----CSSEEEEEEECCTTEEGGGGGSS-CC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBC
T ss_pred ----eCCeEEEEEEecCCCcHHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCC
Confidence 44568999999999999999864 234568999999999999999999999 69999999999999998 78
Q ss_pred ceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 172 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 230 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT 230 (327)
T ss_dssp CEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9999999999765432110 233 88999999999999999984
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=257.71 Aligned_cols=184 Identities=19% Similarity=0.333 Sum_probs=150.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEeccc-----CC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ-----DH 523 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----~~ 523 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++||||+++++++..... +.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45688899999999999999995 578999999997432 234678999999999999999999998864210 11
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.......++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHH--SCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhc--cccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEe
Confidence 1235678999999999999999975 23457889999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCC----------------------C--c-------c-CC-CCccceehhhHHHHHHhhc
Q 006570 604 GYNIPLPSKVRN----------------------T--L-------S-FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 604 DfGla~~~~~~~----------------------~--~-------~-~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+++...... + . + .. +.++|||||||++|||+++
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p 227 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSC
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhc
Confidence 999997653210 0 0 2 23 8899999999999999874
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=271.28 Aligned_cols=177 Identities=17% Similarity=0.234 Sum_probs=147.1
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC------CCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL------RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~g~~~~~~~~ 522 (640)
..+|++.+.||+|+||+||+|+. .+++.||||+++... ...+++.+|+++++.+ +|+||+++++++.
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~----- 169 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT----- 169 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-----
Confidence 35688899999999999999984 458999999997432 2345677888888777 5779999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc--e
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--A 600 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--~ 600 (640)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +
T Consensus 170 ---~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 170 ---FRNHICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp ---ETTEEEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCE
T ss_pred ---cCCeEEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcce
Confidence 3456899999996 6999999762 33458999999999999999999999 69999999999999999987 9
Q ss_pred EEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 242 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~ 296 (429)
T 3kvw_A 242 KVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296 (429)
T ss_dssp EECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCC
Confidence 99999999765432211 334 89999999999999999984
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=265.30 Aligned_cols=180 Identities=17% Similarity=0.287 Sum_probs=149.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++.... .+..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT---IEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS---TTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC---cccc
Confidence 35788899999999999999984 4688999999974322 22367889999999999999999999885321 1233
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ |+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 56899999997 599999964 358999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCC-----------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT-----------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~-----------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++....... . ... +.++|||||||++|||++|.
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 229 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCC
Confidence 976532210 0 233 88999999999999999984
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=256.63 Aligned_cols=177 Identities=16% Similarity=0.264 Sum_probs=145.6
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..++|+..+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++++..++++.. .+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~-------~~ 77 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA-------EG 77 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE-------ET
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC-------CC
Confidence 346799999999999999999994 6789999998764432 3468899999999999998888887752 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~D 604 (640)
...++||||+ +|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred CceEEEEEcc-CCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEec
Confidence 5689999999 9999999974 23468999999999999999999999 699999999999999 7889999999
Q ss_pred CCCCccccCCCC---------------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT---------------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~---------------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... . +.. +.++|||||||++|||++|.
T Consensus 152 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 212 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 212 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCC
Confidence 999976533211 0 223 78999999999999999984
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=283.13 Aligned_cols=251 Identities=15% Similarity=0.114 Sum_probs=165.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChh-hhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRF-FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVL 153 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 153 (640)
.+++.|+|++|.+++.. +..+.....|++|+|++|...+.+ |.+|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 24 ~~l~~LdLs~N~i~~i~-~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVT-ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp TTCCEEEEESCCCCEEC-SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCcCEEECCCCcCCccC-hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 57888888888875432 222444577777777777555554 6677777777777777777777777777777777777
Q ss_pred EcccCcccccCCcc--ccCCCCCCEEEccCccCCccCCC--ccCcCcCCeeEccCCCCCCCCCCcc--------------
Q 006570 154 NISSNFIYGEIPME--ITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLS-------------- 215 (640)
Q Consensus 154 ~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~-------------- 215 (640)
+|++|.+++.+|.. |.++++|++|+|++|.+++..+. |.++++|++|+|++|.+++..+..+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 77777777666554 77777777777777777776542 6777777777777777654433210
Q ss_pred --------------------------------------------------------------------------------
Q 006570 216 -------------------------------------------------------------------------------- 215 (640)
Q Consensus 216 -------------------------------------------------------------------------------- 215 (640)
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence
Q ss_pred ---cccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCE
Q 006570 216 ---KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNF 292 (640)
Q Consensus 216 ---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~ 292 (640)
++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 23444444555555555555566666666666666666666666666666666666666666655666666666666
Q ss_pred EeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 293 VEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 293 L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
|++++|++++..|..|..+++|+.|++++|.+++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 6666666665555566666666666666666654
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-28 Score=272.79 Aligned_cols=251 Identities=20% Similarity=0.152 Sum_probs=134.0
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|++++|.+++.. +..+...+.|+.|+|++|.+. .+|..+.++++|++|+|++|.+.+..|..+..+++|++|++
T Consensus 255 ~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 332 (606)
T 3t6q_A 255 SVESINLQKHYFFNIS-SNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI 332 (606)
T ss_dssp EEEEEECTTCCCSSCC-TTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEEC
T ss_pred ceeEEEeecCccCccC-HHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEEC
Confidence 4666666666653322 111223355566666665554 44555555666666666666665555555555555666666
Q ss_pred ccCcccccCCcc-ccCCCCCCEEEccCccCCccC--C-CccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcc
Q 006570 156 SSNFIYGEIPME-ITSLKNLKSIVLADNLLNGSV--P-DLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSL 228 (640)
Q Consensus 156 s~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l 228 (640)
++|.+.+.+|.. +.++++|++|++++|.+++.. + .+..+++|++|++++|++++..|.. +++|+.|++++|++
T Consensus 333 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 412 (606)
T 3t6q_A 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412 (606)
T ss_dssp CSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCE
T ss_pred CCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcC
Confidence 655555544443 555555555555555555543 2 2555555555555555555444432 34555555555555
Q ss_pred cccCCcc-ccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc---CCccccCCCCCCEEeccCccCcccC
Q 006570 229 RSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA---LPVNISCSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 229 ~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~p~~~~~~~~L~~L~ls~N~l~~~~ 304 (640)
++..|.. +.++++|+.|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+.|++++|++++..
T Consensus 413 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 492 (606)
T 3t6q_A 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID 492 (606)
T ss_dssp ECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC
T ss_pred CCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC
Confidence 5444332 55555555555555555555555555555555555555555441 1234555555555555555555555
Q ss_pred CCCccCCCCCceeeeccccccCcc
Q 006570 305 PSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 305 p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
|..+..+++|+.|++++|++++..
T Consensus 493 ~~~~~~l~~L~~L~Ls~N~l~~~~ 516 (606)
T 3t6q_A 493 QHAFTSLKMMNHVDLSHNRLTSSS 516 (606)
T ss_dssp TTTTTTCTTCCEEECCSSCCCGGG
T ss_pred hhhhccccCCCEEECCCCccCcCC
Confidence 555555555555555555555443
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-29 Score=258.74 Aligned_cols=184 Identities=22% Similarity=0.372 Sum_probs=150.2
Q ss_pred HhcCCCCCCccccCCccceEEEEe--CCCcEEEEEEeecccC--CChHHHHHHHHHHhcC---CCcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~ 521 (640)
..++|+..+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+++++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456789999999999999999996 4688999999975432 2234677788777766 89999999999863221
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
......++||||++ |+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 89 ---~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 ---DRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp ---SSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred ---CCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEE
Confidence 13456899999998 6999999753 33458999999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 216 (326)
T 1blx_A 161 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216 (326)
T ss_dssp ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCC
Confidence 9999999765422110 233 88999999999999999984
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=268.60 Aligned_cols=173 Identities=19% Similarity=0.238 Sum_probs=144.0
Q ss_pred cCCCCCCccccCCccceEEEEeC---------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccce----------
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT---------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS---------- 511 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 511 (640)
++|++.+.||+|+||.||+|+.. +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57888999999999999999965 3789999998743 46889999999999999998
Q ss_pred -----eeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 512 -----ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 512 -----l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
+++++.. .+...++||||+ +|+|.+++... ....+++..++.++.|++.||+|||+ .+|+|||
T Consensus 117 ~~i~~~~~~~~~-------~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVH-------QDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEE-------TTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSC
T ss_pred cCccchhhcccc-------CCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCC
Confidence 4555542 245689999999 99999999752 23569999999999999999999999 6999999
Q ss_pred CCCCceeecCCC--ceEEeCCCCCccccCCCC-----------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 587 LKTENILLDKAL--TAKLSGYNIPLPSKVRNT-----------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 587 lk~~NILl~~~~--~~kl~DfGla~~~~~~~~-----------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+||+++.++ .+||+|||+++....... + +.. +.++|||||||++|||+||
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g 264 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYG 264 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999998 999999999976532110 0 223 8899999999999999998
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 265 ~ 265 (352)
T 2jii_A 265 F 265 (352)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=267.54 Aligned_cols=176 Identities=19% Similarity=0.274 Sum_probs=136.3
Q ss_pred CCC-CCccccCCccceEEEEeC---CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDP-TNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|.. .+.||+|+||+||+|+.. +++.||||++... ...+.+.+|+++|++++||||+++++++... ...
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~~ 93 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSH------ADR 93 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEET------TTT
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecC------CCC
Confidence 444 568999999999999964 4788999999743 2346789999999999999999999998632 345
Q ss_pred eEEEEEEccCCCCHhHHhhccC------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKAL 598 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~ 598 (640)
..++||||+++ +|.+++.... ....+++..++.|+.|++.||+|||+ .+|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCC
Confidence 68999999974 8988886321 22358999999999999999999999 699999999999999 7779
Q ss_pred ceEEeCCCCCccccCCC-----------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRN-----------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~-----------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++...... + + + .. +.++|||||||++|||+||.
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 233 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSS
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCC
Confidence 99999999997654211 0 0 2 33 88999999999999999984
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=255.37 Aligned_cols=176 Identities=16% Similarity=0.253 Sum_probs=148.5
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++.++|++++..++++.. .+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-------~~~ 78 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA-------EGD 78 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEE-------ETT
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccC-------CCC
Confidence 46788899999999999999994 678999999987543 23578999999999999998888877652 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+ +|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++ ++++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 79 YNVMVMELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEec-CCCHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 689999999 8999999974 23468999999999999999999999 699999999999999 48899999999
Q ss_pred CCCccccCCCC----------c--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------L--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||++|.
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 212 (296)
T 3uzp_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 212 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence 99976543211 0 223 78999999999999999984
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=257.70 Aligned_cols=179 Identities=15% Similarity=0.223 Sum_probs=137.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.++...++.++||||+++++++. .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~--------~ 77 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF--------R 77 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee--------c
Confidence 45788899999999999999995 57899999999754221 1233445555688889999999999986 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeecCCCceEEeC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+...++||||++ |+|.+++... .....+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+||+|
T Consensus 78 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~D 153 (290)
T 3fme_A 78 EGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCD 153 (290)
T ss_dssp SSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCC
T ss_pred cCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEee
Confidence 455899999997 5998887642 234679999999999999999999998 5 999999999999999999999999
Q ss_pred CCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||+||.
T Consensus 154 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 210 (290)
T 3fme_A 154 FGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210 (290)
T ss_dssp C---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTS
T ss_pred cCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999764322110 122 77999999999999999984
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=262.72 Aligned_cols=179 Identities=17% Similarity=0.292 Sum_probs=144.4
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|+..+.||+|+||.||+|+. .++..||||++.... .....++.+|+.++++++||||+++++++.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL----- 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-----
Confidence 46788899999999999999984 246789999996432 223467899999999999999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCC----CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-- 596 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-- 596 (640)
.....++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 104 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 104 ---QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp ---SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred ---CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCC
Confidence 33457999999999999999986322 2458999999999999999999999 69999999999999984
Q ss_pred -CCceEEeCCCCCccccCCC----------C--c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 597 -ALTAKLSGYNIPLPSKVRN----------T--L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 597 -~~~~kl~DfGla~~~~~~~----------~--~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+..+||+|||+++...... + + +.. +.++|||||||++|||+| |
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 242 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 242 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCC
Confidence 4569999999986432111 0 1 233 889999999999999998 6
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=251.87 Aligned_cols=204 Identities=20% Similarity=0.214 Sum_probs=191.6
Q ss_pred CCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeE
Q 006570 122 KLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELN 201 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 201 (640)
..++++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++++++|++|+|++|.++..++.+.++++|++|+
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELS 156 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEE
Confidence 4688999999999996 78999999999999999999999 999999999999999999999996655699999999999
Q ss_pred ccCCCCCCCCCCc------------ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEE
Q 006570 202 LGGNDFGPKFPSL------------SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYL 269 (640)
Q Consensus 202 L~~N~l~~~~~~~------------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 269 (640)
|++|++.+.+|.. +++|+.|+|++|+++ .+|..++++++|++|+|++|++++ +|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9999998888863 679999999999999 889999999999999999999996 66679999999999
Q ss_pred EccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 270 NLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 270 ~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+|++|++.+.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++.+..|
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP 294 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhcc
Confidence 999999999999999999999999999999999999999999999999999999998765
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=256.96 Aligned_cols=176 Identities=19% Similarity=0.292 Sum_probs=140.1
Q ss_pred cCCCCCCccccCCccceEEEEeC--CCc--EEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--DGS--RVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|+..+.||+|+||+||+|++. +++ .||||+++... ....+++.+|++++++++||||+++++++..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 92 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 92 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-----
Confidence 56888899999999999999853 333 69999987542 2234678999999999999999999998841
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 93 ----~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~ 163 (291)
T 1u46_A 93 ----PPMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIG 163 (291)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEEC
T ss_pred ----CCceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEc
Confidence 2278999999999999999752 3458899999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 604 GYNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 604 DfGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|||+++....... + +.. +.++||||||+++|||++ |.
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 222 (291)
T 1u46_A 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222 (291)
T ss_dssp CCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred cccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999976543211 0 223 789999999999999998 63
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-29 Score=267.23 Aligned_cols=181 Identities=18% Similarity=0.278 Sum_probs=148.3
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC--------CcccceeeeEEEecc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR--------HRHLVSILGHCILTY 520 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~g~~~~~~ 520 (640)
.++|++.+.||+|+||+||+|+ ..+++.||||+++.. ....+.+.+|+++++.++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3678899999999999999998 456889999999743 223467889999999985 788999999886332
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeecCCC-
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLDKAL- 598 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~~~~- 598 (640)
. .+...++||||+ +|++.+++.. .....+++..++.|+.|++.||+|||+ . +|+||||||+|||++.++
T Consensus 115 ~----~~~~~~lv~e~~-~~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 115 V----NGTHICMVFEVL-GHHLLKWIIK-SNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp T----TEEEEEEEECCC-CCBHHHHHHH-TTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred C----CCceEEEEEecc-CccHHHHHHh-cccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 1 345689999999 5677777754 233568999999999999999999998 5 899999999999999775
Q ss_pred ------------------------------------------------ceEEeCCCCCccccCCCCc-------------
Q 006570 599 ------------------------------------------------TAKLSGYNIPLPSKVRNTL------------- 617 (640)
Q Consensus 599 ------------------------------------------------~~kl~DfGla~~~~~~~~~------------- 617 (640)
.+||+|||+++........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHH
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhh
Confidence 7999999999765432211
Q ss_pred -cCC-CCccceehhhHHHHHHhhcC
Q 006570 618 -SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 618 -~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.. +.++|||||||++|||+||.
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~ 290 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGD 290 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCC
Confidence 334 88999999999999999984
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-28 Score=270.77 Aligned_cols=252 Identities=18% Similarity=0.107 Sum_probs=216.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCcc-ccCCCCCCEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK-INRFWSLEVL 153 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L 153 (640)
.+++.|++++|.++ .++. .....+.|++|++++|.+.+..|..+.++++|++|++++|.+.+.+|.. +..+++|++|
T Consensus 278 ~~L~~L~l~~n~l~-~lp~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 355 (606)
T 3t6q_A 278 SGLQELDLTATHLS-ELPS-GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLREL 355 (606)
T ss_dssp TTCSEEECTTSCCS-CCCS-SCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEE
T ss_pred cCCCEEeccCCccC-CCCh-hhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEE
Confidence 47888999999885 2322 1334578999999999998888888999999999999999998777754 8899999999
Q ss_pred EcccCcccccC--CccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc----ccccceeecccC
Q 006570 154 NISSNFIYGEI--PMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL----SKNIVSVILRNN 226 (640)
Q Consensus 154 ~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~~N 226 (640)
+|++|.+.+.. |..+.++++|++|++++|.+++.+|. |..+++|++|+|++|++++..|.. +++|+.|++++|
T Consensus 356 ~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n 435 (606)
T 3t6q_A 356 DLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHS 435 (606)
T ss_dssp ECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTC
T ss_pred ECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCC
Confidence 99999998766 77899999999999999999988776 888999999999999988766542 688999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccCc---CCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCccc
Q 006570 227 SLRSEIPSGLKNFDQLKQFDISSNNFVGP---IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~ 303 (640)
.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..|..+++|+.|++++|++++.
T Consensus 436 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 515 (606)
T 3t6q_A 436 LLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSS 515 (606)
T ss_dssp CCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGG
T ss_pred ccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcC
Confidence 99988888899999999999999999862 346788899999999999999998889999999999999999999999
Q ss_pred CCCCccCCCCCceeeeccccccCccC
Q 006570 304 LPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 304 ~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
.|..+..++.+ .+++++|.+++.++
T Consensus 516 ~~~~l~~l~~L-~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 516 SIEALSHLKGI-YLNLASNHISIILP 540 (606)
T ss_dssp GGGGGTTCCSC-EEECCSSCCCCCCG
T ss_pred ChhHhCccccc-EEECcCCcccccCH
Confidence 99999999999 99999999987654
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-29 Score=262.55 Aligned_cols=180 Identities=14% Similarity=0.283 Sum_probs=144.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+++++.++||||+++++++..... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS--LRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS--STT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC--ccc
Confidence 35788889999999999999984 56899999999754322 24678899999999999999999999853211 111
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||++ |+|.+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 223499999997 59988873 348999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ + .. +.++|||||||++|||+||.
T Consensus 190 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 239 (371)
T 4exu_A 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239 (371)
T ss_dssp CC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence 99765432211 2 34 89999999999999999984
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=250.98 Aligned_cols=178 Identities=19% Similarity=0.319 Sum_probs=151.7
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 91 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-------- 91 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe--------
Confidence 4467899999999999999999954 68999999997543 345678999999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl 602 (640)
.....++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.+ +.+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL 165 (287)
T 2wei_A 92 DSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKI 165 (287)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCCeEEEEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEE
Confidence 34568999999999999999865 3458999999999999999999999 699999999999999764 47999
Q ss_pred eCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||++......... ... +.++||||||+++|||++|.
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~ 219 (287)
T 2wei_A 166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219 (287)
T ss_dssp CSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCC
Confidence 999999765433211 233 88999999999999999984
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=268.33 Aligned_cols=176 Identities=18% Similarity=0.261 Sum_probs=144.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++.+..+.++.. ...
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~-------~~~ 76 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV-------EGD 76 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE-------ETT
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe-------eCC
Confidence 36789999999999999999994 6789999998875432 3468899999999988655555544431 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+ +|+|.+++.. ....+++.+++.|+.||+.||+|||+ .+||||||||+|||+ +.++.+||+||
T Consensus 77 ~~~lvme~~-g~sL~~ll~~--~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 77 YNVLVMDLL-GPSLEDLFNF--CSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEEEECC-CCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeC
Confidence 689999999 8999999974 24469999999999999999999999 799999999999999 68899999999
Q ss_pred CCCccccCCCC-----------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-----------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-----------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++|||||||++|||++|.
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~ 210 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGS 210 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 99976543211 0 233 78999999999999999984
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-28 Score=275.27 Aligned_cols=247 Identities=16% Similarity=0.172 Sum_probs=216.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccC-CCC-hhhhhhcCC------CCCcEeecccCcCcCCCCc--cc
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANF-NID-RFFTILTKL------SNLKVLSLVSLGLWGPLPS--KI 144 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~-~~~-~~~~~l~~l------~~L~~L~L~~n~l~~~~p~--~~ 144 (640)
.+++.|+|++|.+.+.++. .....+.|+.|+|++|. +.+ .+|..++++ ++|++|+|++|.++ .+|. .+
T Consensus 249 ~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 249 KDLTDVEVYNCPNLTKLPT-FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp TTCCEEEEECCTTCSSCCT-TTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred CCCCEEEecCCcCCccChH-HHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 5789999999998777653 24456899999999998 888 899988887 99999999999997 8998 99
Q ss_pred cCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCc-CCeeEccCCCCCCCCCCc-----cccc
Q 006570 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVL-LEELNLGGNDFGPKFPSL-----SKNI 218 (640)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~-----~~~L 218 (640)
+++++|++|+|++|.++|.+| .|+++++|++|+|++|+++..++.+.++++ |++|+|++|+++ .+|.. +++|
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L 404 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVM 404 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCE
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCcc
Confidence 999999999999999999999 999999999999999999966666999999 999999999998 56654 3489
Q ss_pred ceeecccCcccccCCcccc-------CCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc-cCC---
Q 006570 219 VSVILRNNSLRSEIPSGLK-------NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCS--- 287 (640)
Q Consensus 219 ~~L~l~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~~--- 287 (640)
+.|++++|++++.+|..|. .+++|+.|+|++|++++..+..+..+++|++|+|++|+++. +|..+ ...
T Consensus 405 ~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~~~~~ 483 (636)
T 4eco_A 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-IPKNSLKDENEN 483 (636)
T ss_dssp EEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSB-CCSSSSEETTEE
T ss_pred CEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCC-cCHHHhcccccc
Confidence 9999999999999999998 88899999999999996555556679999999999999984 55543 322
Q ss_pred ----CCCCEEeccCccCcccCCCCcc--CCCCCceeeeccccccCc
Q 006570 288 ----AKLNFVEISHNLLIGKLPSCIG--SNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 288 ----~~L~~L~ls~N~l~~~~p~~~~--~~~~l~~l~l~~N~l~~~ 327 (640)
++|+.|+|++|+++ .+|..+. .+++|+.|++++|++++.
T Consensus 484 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~i 528 (636)
T 4eco_A 484 FKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKF 528 (636)
T ss_dssp CTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred ccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCc
Confidence 28999999999999 7888887 999999999999999984
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-30 Score=269.89 Aligned_cols=183 Identities=9% Similarity=0.033 Sum_probs=132.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHH---HHHhcCCCcccceee-------eEE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHV---ELLSKLRHRHLVSIL-------GHC 516 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~h~niv~l~-------g~~ 516 (640)
.+|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+ +.|+. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 3577889999999999999995 4789999999986432 2235677785 45555 799988755 333
Q ss_pred EecccC-------C--CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHH------HHHHHHHHHHhhhcccCCCCC
Q 006570 517 ILTYQD-------H--PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR------MAIIIGATRGVQFLHTGVAPG 581 (640)
Q Consensus 517 ~~~~~~-------~--~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~~ 581 (640)
...... . .......++|||||+ |+|.+++... ...+.+..+ ..++.|++.||+|||+ .+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KG 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CC
Confidence 211110 0 001145899999999 8999999753 223456666 7888999999999998 79
Q ss_pred eeccCCCCCceeecCCCceEEeCCCCCccccCCC-Cc-------------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 582 IFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN-TL-------------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 582 iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~-~~-------------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+||||||+|||++.++.+||+|||+++...... .. + .. +.++|||||||++|||+||.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998664332 10 2 33 89999999999999999984
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-29 Score=260.73 Aligned_cols=180 Identities=17% Similarity=0.295 Sum_probs=149.2
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... ....++.+|++++++++||||+++++++... .....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD---SFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS---CSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeeccc---ccCcc
Confidence 46788899999999999999995 4689999999964322 2345788999999999999999999987531 12234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 66899999997 599999864 358999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC------------------C--c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN------------------T--L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~------------------~--~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... + + ... +.++|||||||++|||++|.
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 220 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCC
Confidence 97653210 0 0 233 88999999999999999984
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=272.82 Aligned_cols=137 Identities=16% Similarity=0.021 Sum_probs=108.6
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 27 ~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 27 AMKSLDLSFNKITYIG-HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TCCEEECCSSCCCEEC-SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CccEEECcCCccCccC-hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 6889999999885433 222445578899999999888888888999999999999999998777777889999999999
Q ss_pred ccCcccc-cCCccccCCCCCCEEEccCccC-CccCCC-ccCcCcCCeeEccCCCCCCCCCC
Q 006570 156 SSNFIYG-EIPMEITSLKNLKSIVLADNLL-NGSVPD-LQRLVLLEELNLGGNDFGPKFPS 213 (640)
Q Consensus 156 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l-~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~ 213 (640)
++|.+++ .+|..++++++|++|++++|.+ ...++. |.++++|++|++++|++++..|.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 9999886 4577888888999999988884 444433 88888888888888888765553
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-28 Score=268.38 Aligned_cols=126 Identities=17% Similarity=0.085 Sum_probs=63.6
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
+++.|+|++|.+++..+ ..+...+.|++|+|++|.+.+..|..|+++++|++|+|++|.++ .+|.. .+++|++|+|
T Consensus 22 ~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 22 KTTILNISQNYISELWT-SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TCSEEECCSSCCCCCCH-HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred cccEEECCCCcccccCh-hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 45555555555432211 11222345555555555555555555555555555555555554 34433 4555555555
Q ss_pred ccCcccc-cCCccccCCCCCCEEEccCccCCccCCCccCcCcC--CeeEccCCCC
Q 006570 156 SSNFIYG-EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLL--EELNLGGNDF 207 (640)
Q Consensus 156 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L--~~L~L~~N~l 207 (640)
++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+++| ++|+|++|++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccc
Confidence 5555554 345555555555555555555544 224444444 5555555555
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-28 Score=269.09 Aligned_cols=242 Identities=18% Similarity=0.097 Sum_probs=171.5
Q ss_pred EEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEccc
Q 006570 78 TELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISS 157 (640)
Q Consensus 78 ~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 157 (640)
..+++++++++...... .+.++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~ip~~~----~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKDL----PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCSCCTTS----CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCccCCCCC----CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 66788888775432211 26788888888888887778888888888888888888887788888888888888888
Q ss_pred CcccccCCccccCCCCCCEEEccCccCCccC-C-CccCcCcCCeeEccCCCCCCCCCCccccc--ceeecccCcc--ccc
Q 006570 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSV-P-DLQRLVLLEELNLGGNDFGPKFPSLSKNI--VSVILRNNSL--RSE 231 (640)
Q Consensus 158 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L--~~L~l~~N~l--~~~ 231 (640)
|.|+ .+|.. .+++|++|+|++|++++.+ | .|.++++|++|+|++|++++.....+++| +.|++++|++ ++.
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~ 186 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGG 186 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSS
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeeccccccccc
Confidence 8888 67766 7888888888888888754 3 48888888888888888876444444555 7777777777 656
Q ss_pred CCccccCCC-----------------------------------------------------------------------
Q 006570 232 IPSGLKNFD----------------------------------------------------------------------- 240 (640)
Q Consensus 232 ~p~~~~~l~----------------------------------------------------------------------- 240 (640)
.|..+..+.
T Consensus 187 ~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~ 266 (562)
T 3a79_B 187 ETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCS 266 (562)
T ss_dssp SCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHH
T ss_pred CcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHH
Confidence 565554433
Q ss_pred ----------CccEEEccCCcccCcCCccc--------------------------------------------------
Q 006570 241 ----------QLKQFDISSNNFVGPIQSFL-------------------------------------------------- 260 (640)
Q Consensus 241 ----------~L~~L~Ls~N~l~~~~p~~~-------------------------------------------------- 260 (640)
+|++|++++|+++|.+|..+
T Consensus 267 ~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~ 346 (562)
T 3a79_B 267 VKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHM 346 (562)
T ss_dssp HHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCC
T ss_pred HHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccc
Confidence 56666666666666666544
Q ss_pred ---cCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc--cCCCCccCCCCCceeeeccccccC
Q 006570 261 ---FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG--KLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 261 ---~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~--~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|.+++
T Consensus 347 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 417 (562)
T 3a79_B 347 VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417 (562)
T ss_dssp CCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS
T ss_pred cCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC
Confidence 455666666666666666666666666666666666666664 223456666666666666666665
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=258.82 Aligned_cols=233 Identities=19% Similarity=0.127 Sum_probs=207.0
Q ss_pred cccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 67 SLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 67 ~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
+..|.|.+ ..++.|+|++|.+++.. +..+...+.|+.|+|++|.+.+..+..|.++++|++|+|++|.
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQ-ADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEEC-TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceEC-HHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 34688864 26889999999985533 2334456899999999999999888999999999999999999
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc-cCCccCCC-ccCcCcCCeeEccCCCCCCCCCC
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN-LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS 213 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~ 213 (640)
+++..+..|..+++|++|+|++|.|++..+..|.++++|+.|+|++| .+...++. |.++++|++|+|++|++++. |.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~ 213 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PN 213 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cc
Confidence 98777778999999999999999999777778999999999999994 55555554 99999999999999999865 44
Q ss_pred c--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCC
Q 006570 214 L--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291 (640)
Q Consensus 214 ~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 291 (640)
. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..+++|+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC
Confidence 3 78999999999999999999999999999999999999999999999999999999999999988888899999999
Q ss_pred EEeccCccCc
Q 006570 292 FVEISHNLLI 301 (640)
Q Consensus 292 ~L~ls~N~l~ 301 (640)
.|+|++|.+.
T Consensus 294 ~L~L~~Np~~ 303 (452)
T 3zyi_A 294 ELHLHHNPWN 303 (452)
T ss_dssp EEECCSSCEE
T ss_pred EEEccCCCcC
Confidence 9999999886
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.8e-29 Score=279.42 Aligned_cols=177 Identities=17% Similarity=0.285 Sum_probs=148.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+... +..||||+++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------ 461 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 461 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence 44678888999999999999998532 45799999875322 23467899999999999999999999873
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
....++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 462 ---~~~~~lv~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 462 ---ENPVWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHH--TTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEEC
T ss_pred ---cCceEEEEEcCCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEE
Confidence 2347999999999999999975 23468999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 604 GYNIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 604 DfGla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+++....... + ... +.++|||||||++|||++ |
T Consensus 534 DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g 589 (656)
T 2j0j_A 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589 (656)
T ss_dssp CCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcC
Confidence 9999987643221 0 233 889999999999999997 5
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=242.51 Aligned_cols=222 Identities=16% Similarity=0.071 Sum_probs=200.0
Q ss_pred cccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc
Q 006570 103 SQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182 (640)
Q Consensus 103 ~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 182 (640)
..++.+++.+.. +|.. -.++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~--~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVG--IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTT--CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcC--CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 456777776643 4443 3579999999999998877788999999999999999999888999999999999999999
Q ss_pred c-CCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC
Q 006570 183 L-LNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257 (640)
Q Consensus 183 ~-l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (640)
. ++...|. +..+++|++|+|++|++++..|.. +++|++|++++|++++..+..|.++++|+.|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 8 8888665 999999999999999999887754 6899999999999998777789999999999999999998777
Q ss_pred ccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 258 SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 258 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
..|..+++|++|+|++|++++..|..+..+++|+.|++++|++++..|..+..+++|+.+++++|.+...
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 7899999999999999999998899999999999999999999987777899999999999999998764
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=258.86 Aligned_cols=179 Identities=14% Similarity=0.280 Sum_probs=144.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++..... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS--LRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS--GGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc--cccc
Confidence 5678889999999999999995 4689999999975322 224678899999999999999999998852111 0011
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ |+|.+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 23599999997 59988874 248999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++|||||||++|||++|.
T Consensus 173 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 221 (353)
T 3coi_A 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221 (353)
T ss_dssp TTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCC
Confidence 9865432111 2 34 88999999999999999984
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-29 Score=258.95 Aligned_cols=181 Identities=22% Similarity=0.282 Sum_probs=142.9
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC------CChHHHHHHHHHHhcC----CCcccceeee
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKL----RHRHLVSILG 514 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~g 514 (640)
.+...++|++.+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999984 5688999999975432 1223456788888888 8999999999
Q ss_pred EEEecccCCCCCCCeEEEEEEc-cCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCcee
Q 006570 515 HCILTYQDHPNTGSTVFLVLEH-ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593 (640)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lv~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 593 (640)
++. ..+..++|||| +++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 106 ~~~--------~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 171 (312)
T 2iwi_A 106 WFE--------TQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENIL 171 (312)
T ss_dssp EC-------------CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEE
T ss_pred EEe--------cCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEE
Confidence 875 33457999999 789999999975 3458999999999999999999999 69999999999999
Q ss_pred ec-CCCceEEeCCCCCccccCCCCc---------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 594 LD-KALTAKLSGYNIPLPSKVRNTL---------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 594 l~-~~~~~kl~DfGla~~~~~~~~~---------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
++ +++.+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 172 ~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 236 (312)
T 2iwi_A 172 IDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236 (312)
T ss_dssp EETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred EeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence 99 8899999999999765432211 122 45899999999999999985
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=273.12 Aligned_cols=251 Identities=16% Similarity=0.096 Sum_probs=207.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLP-AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCC-GGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcC-HHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 36899999999885533 22233458899999999999998899999999999999999999765555799999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc-----ccccceeecccCcc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL-----SKNIVSVILRNNSL 228 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~-----~~~L~~L~l~~N~l 228 (640)
|++|.+++..|..|+++++|++|+|++|.+++.+|. +.++++|++|+|++|++++..+.. .++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999977778899999999999999999998876 889999999999999998877653 37899999999999
Q ss_pred cccCCccccCC---------------------------CCccEEEccCCcccCcCCccccCCCC--CcEEEccCCcCCcc
Q 006570 229 RSEIPSGLKNF---------------------------DQLKQFDISSNNFVGPIQSFLFSLPS--ILYLNLAGNQLSEA 279 (640)
Q Consensus 229 ~~~~p~~~~~l---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~ 279 (640)
++..|..|..+ ++|+.|++++|++++..|..|..++. |+.|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 88888766544 45677788888888877888877754 88888888888887
Q ss_pred CCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
.|..|..+++|+.|++++|++++..|..+..+++|+.+++++|...+
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~ 310 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQ 310 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhc
Confidence 77888888888888888888888888777777777777777655443
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=269.04 Aligned_cols=158 Identities=20% Similarity=0.125 Sum_probs=121.2
Q ss_pred CCCCCCCC----CCCCCCCCCCcccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCC
Q 006570 49 VLQGWTDW----TNFCYLPSSSSLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNI 113 (640)
Q Consensus 49 ~l~~W~~~----~~~C~~~~~~~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~ 113 (640)
.+++|+.+ -++|.+.. +...|.|.. ..++.|||++|.++. +++..+...+.|++|+|++|.+.
T Consensus 12 ~~~~~~~~~p~~~~~c~~~~-~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~ 89 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEVV-PNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQ 89 (635)
T ss_dssp -------------CCSEEEE-TTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCC
T ss_pred hhhcccCCCCCCCCCccccC-CCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCC
Confidence 45555543 13564421 123578963 368999999999854 34444566789999999999998
Q ss_pred ChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCcc-CCC-c
Q 006570 114 DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGS-VPD-L 191 (640)
Q Consensus 114 ~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~-~ 191 (640)
+..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|++|++++. .|. +
T Consensus 90 ~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~ 169 (635)
T 4g8a_A 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 169 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh
Confidence 88888999999999999999999877777899999999999999999977677799999999999999999875 344 7
Q ss_pred cCcCcCCeeEccCCCCC
Q 006570 192 QRLVLLEELNLGGNDFG 208 (640)
Q Consensus 192 ~~l~~L~~L~L~~N~l~ 208 (640)
..+++|++|+|++|+++
T Consensus 170 ~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 170 SNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp GGCTTCCEEECCSSCCC
T ss_pred ccchhhhhhcccCcccc
Confidence 88899999999888764
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-29 Score=274.84 Aligned_cols=185 Identities=17% Similarity=0.197 Sum_probs=151.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++... .....+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~--~~~~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL--QKLAPND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTT--CCCCTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccc--ccccCCC
Confidence 6799999999999999999995 568999999987532 22346789999999999999999999986421 1112356
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---eEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---AKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~Df 605 (640)
..++||||+++|+|.+++........+++..++.++.+++.||+|||+ .+|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 679999999999999999865555579999999999999999999999 69999999999999997764 999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~ 220 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCC
Confidence 999875432210 234 88999999999999999984
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=256.50 Aligned_cols=177 Identities=18% Similarity=0.257 Sum_probs=147.4
Q ss_pred hcCCCCCCccccCCccceEEEEe--CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc------cceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH------LVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~ 521 (640)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~---- 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE---- 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc----
Confidence 35788899999999999999985 368899999997432 23467889999999887665 899999875
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-----
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK----- 596 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~----- 596 (640)
.....++||||+ +|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 88 ----~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 88 ----HHGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp ----ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEE
T ss_pred ----cCCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEecccccc
Confidence 345689999999 88999999762 33468999999999999999999999 69999999999999987
Q ss_pred --------------CCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 597 --------------ALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 597 --------------~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++.+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 231 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence 668999999999765432211 334 89999999999999999984
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-29 Score=256.39 Aligned_cols=179 Identities=18% Similarity=0.328 Sum_probs=144.9
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
.....++|+..+.||+|+||.||+|+... .||+|+++... ....+.+.+|++++++++||||+++++++.
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 99 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM------ 99 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE------
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe------
Confidence 33445788999999999999999999753 59999987542 233456889999999999999999999986
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++ ++.+||+
T Consensus 100 --~~~~~~iv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~ 171 (319)
T 2y4i_B 100 --SPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVIT 171 (319)
T ss_dssp --CSSCEEEECBCCCSEEHHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEEC
T ss_pred --cCCceEEEeecccCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEe
Confidence 33458999999999999999974 34468999999999999999999999 6999999999999998 6799999
Q ss_pred CCCCCccccCCC-------------C--c------c----------CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRN-------------T--L------S----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~-------------~--~------~----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++...... + + . .. +.++|||||||++|||++|.
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 240 (319)
T 2y4i_B 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240 (319)
T ss_dssp CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence 999976542110 0 0 1 12 77899999999999999984
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=254.97 Aligned_cols=233 Identities=18% Similarity=0.120 Sum_probs=206.1
Q ss_pred cccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 67 SLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 67 ~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
+..|.|.+ ..++.|+|++|.++... +..+.....|+.|+|++|.+.+..+..|.++++|++|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIK-VNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEEC-TTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeC-HHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 34688864 35788999999885433 2334556899999999999998888999999999999999999
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCcc-CCccCCC-ccCcCcCCeeEccCCCCCCCCCC
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL-LNGSVPD-LQRLVLLEELNLGGNDFGPKFPS 213 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~ 213 (640)
+++..+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|. +....+. |.++++|++|+|++|+++.. |.
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~ 202 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN 202 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-cc
Confidence 987767789999999999999999997777789999999999999954 5555554 99999999999999999854 44
Q ss_pred c--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCC
Q 006570 214 L--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291 (640)
Q Consensus 214 ~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 291 (640)
. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 4 78999999999999999999999999999999999999999999999999999999999999998888899999999
Q ss_pred EEeccCccCc
Q 006570 292 FVEISHNLLI 301 (640)
Q Consensus 292 ~L~ls~N~l~ 301 (640)
.|+|++|.+.
T Consensus 283 ~L~L~~Np~~ 292 (440)
T 3zyj_A 283 RIHLHHNPWN 292 (440)
T ss_dssp EEECCSSCEE
T ss_pred EEEcCCCCcc
Confidence 9999999986
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-29 Score=256.61 Aligned_cols=180 Identities=19% Similarity=0.272 Sum_probs=150.0
Q ss_pred HHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC------ChHHHHHHHHHHhcCC--CcccceeeeEEE
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH------LPQSLMQHVELLSKLR--HRHLVSILGHCI 517 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~g~~~ 517 (640)
....++|+..+.||+|+||.||+|+ ..+++.||||+++..... ..+.+.+|++++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3445779999999999999999998 457899999999764321 2356778999999996 599999999985
Q ss_pred ecccCCCCCCCeEEEEEEccCC-CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec-
Q 006570 518 LTYQDHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD- 595 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~- 595 (640)
.....++||||+.+ ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++
T Consensus 119 --------~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~ 184 (320)
T 3a99_A 119 --------RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDL 184 (320)
T ss_dssp --------CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEET
T ss_pred --------cCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeC
Confidence 34568999999976 899999975 3468999999999999999999999 7999999999999999
Q ss_pred CCCceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++.+||+|||+++........ ... +.++|||||||++|||+||.
T Consensus 185 ~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 246 (320)
T 3a99_A 185 NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246 (320)
T ss_dssp TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCC
Confidence 7799999999999765432211 222 67889999999999999984
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=252.94 Aligned_cols=178 Identities=16% Similarity=0.233 Sum_probs=142.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHH-HHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|...+.||+|+||.||+|+. .+|+.||||+++.... ....++..|+. +++.++||||+++++++. ..
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~--------~~ 93 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF--------RE 93 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE--------CS
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE--------eC
Confidence 6788899999999999999996 4689999999975422 22345556665 777889999999999986 34
Q ss_pred CeEEEEEEccCCCCHhHHhhcc--CCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeecCCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++||||+++ +|.+++... .....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~D 169 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCD 169 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECC
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEcc
Confidence 568999999985 888887531 224678999999999999999999998 5 999999999999999999999999
Q ss_pred CCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 170 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (327)
T 3aln_A 170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226 (327)
T ss_dssp CSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSC
T ss_pred CCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999765322110 122 78999999999999999984
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=254.73 Aligned_cols=179 Identities=16% Similarity=0.280 Sum_probs=140.2
Q ss_pred hcCCCCC-CccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPT-NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|.+. +.||+|+||+||+|+.. +++.||||++... .....+....++.++||||+++++++..... .+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~----~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHH----GK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC----CC
Confidence 4577774 46999999999999954 6899999999642 2222333334566799999999998863221 24
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...++||||+++|+|.+++... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEec
Confidence 5589999999999999999752 33569999999999999999999999 69999999999999976 45699999
Q ss_pred CCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||++|.
T Consensus 175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (336)
T 3fhr_A 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGF 226 (336)
T ss_dssp CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999765432111 223 78999999999999999984
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-28 Score=265.83 Aligned_cols=243 Identities=18% Similarity=0.158 Sum_probs=194.0
Q ss_pred EEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccC
Q 006570 79 ELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSN 158 (640)
Q Consensus 79 ~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 158 (640)
.+++++++++..... + ...++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~l~ls~n~l~~ip~~---~-~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLIHVPKD---L-SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCSSCCCS---C-CTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCccccccc---c-cccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 578888888642211 1 278999999999999888889999999999999999998888999999999999999999
Q ss_pred cccccCCccccCCCCCCEEEccCccCCcc-CC-CccCcCcCCeeEccCCCCCCCCCCccccc--ceeecccCcc--cccC
Q 006570 159 FIYGEIPMEITSLKNLKSIVLADNLLNGS-VP-DLQRLVLLEELNLGGNDFGPKFPSLSKNI--VSVILRNNSL--RSEI 232 (640)
Q Consensus 159 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L--~~L~l~~N~l--~~~~ 232 (640)
+|+ .+|.. .+++|++|+|++|++++. +| .|+++++|++|+|++|++++.....+++| +.|++++|.+ .+..
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~ 156 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED 156 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCC
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccc
Confidence 999 67766 899999999999999984 45 49999999999999999986443345555 6777777766 5555
Q ss_pred CccccCCC------------------------------------------------------------------------
Q 006570 233 PSGLKNFD------------------------------------------------------------------------ 240 (640)
Q Consensus 233 p~~~~~l~------------------------------------------------------------------------ 240 (640)
|..+..+.
T Consensus 157 ~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~ 236 (520)
T 2z7x_B 157 PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNS 236 (520)
T ss_dssp TTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHH
T ss_pred cccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHH
Confidence 55554432
Q ss_pred -----------CccEEEccCCcccCcCCccc-------------------------------------------------
Q 006570 241 -----------QLKQFDISSNNFVGPIQSFL------------------------------------------------- 260 (640)
Q Consensus 241 -----------~L~~L~Ls~N~l~~~~p~~~------------------------------------------------- 260 (640)
+|+.|++++|+++|.+|..+
T Consensus 237 ~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~ 316 (520)
T 2z7x_B 237 FIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316 (520)
T ss_dssp HHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCC
T ss_pred HHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccc
Confidence 56666666666665555544
Q ss_pred ----cCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc--cCCCCccCCCCCceeeeccccccCcc
Q 006570 261 ----FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG--KLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 261 ----~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~--~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|.+++..
T Consensus 317 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred ccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 567888899999999988888888889999999999999886 56677888889999999999888743
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=258.73 Aligned_cols=180 Identities=22% Similarity=0.244 Sum_probs=146.0
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-Cc-----ccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HR-----HLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~g~~~~~~~ 521 (640)
..++|++.+.||+|+||+||+|+. .+++.||||+++... ...+++.+|+++++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---- 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM---- 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE----
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec----
Confidence 356888999999999999999985 468899999997432 23466778888888874 44 4899998885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec--CCCc
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KALT 599 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~--~~~~ 599 (640)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||.+ ..+|+||||||+|||++ .++.
T Consensus 127 ----~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 127 ----FRNHLCLVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp ----ETTEEEEEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCC
T ss_pred ----cCCceEEEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCc
Confidence 2356899999996 5999999763 234689999999999999999999952 26899999999999994 4788
Q ss_pred eEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 200 ~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 255 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255 (382)
T ss_dssp EEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999765432211 334 89999999999999999984
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-28 Score=280.92 Aligned_cols=225 Identities=21% Similarity=0.236 Sum_probs=203.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeec-ccCcCcCC---------------------------------------
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSL-VSLGLWGP--------------------------------------- 139 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L-~~n~l~~~--------------------------------------- 139 (640)
..++.|+|++|.+.|.+|++|++|++|++|+| ++|.++|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 36888999999999999999999999999999 77765554
Q ss_pred -------------------------------------CCccccCCCCCCEEEcccCcccc-----------------cCC
Q 006570 140 -------------------------------------LPSKINRFWSLEVLNISSNFIYG-----------------EIP 165 (640)
Q Consensus 140 -------------------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p 165 (640)
+|..|+++++|++|+|++|.|+| .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 88889999999999999999998 399
Q ss_pred cccc--CCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCC-CCC-CCCCc---c-------cccceeecccCcccc
Q 006570 166 MEIT--SLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND-FGP-KFPSL---S-------KNIVSVILRNNSLRS 230 (640)
Q Consensus 166 ~~~~--~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~-l~~-~~~~~---~-------~~L~~L~l~~N~l~~ 230 (640)
..++ ++++|++|+|++|.+.+.+|. |.++++|++|+|++|+ +++ .+|.. + ++|+.|+|++|+++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 9988 999999999999999998887 9999999999999998 887 66653 2 48999999999999
Q ss_pred cCCc--cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCC-CCEEeccCccCcccCCCC
Q 006570 231 EIPS--GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAK-LNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 231 ~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-L~~L~ls~N~l~~~~p~~ 307 (640)
.+|. .|+++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~ 637 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI 637 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh
Confidence 8888 8999999999999999999 788 8999999999999999998 78988999998 999999999999 78988
Q ss_pred ccCCCC--CceeeeccccccCccC
Q 006570 308 IGSNSL--NRTVVSTWNCLSGVNT 329 (640)
Q Consensus 308 ~~~~~~--l~~l~l~~N~l~~~~~ 329 (640)
+...+. |+.|++++|.++|.+|
T Consensus 638 ~~~~~~~~L~~L~Ls~N~l~g~ip 661 (876)
T 4ecn_A 638 FNAKSVYVMGSVDFSYNKIGSEGR 661 (876)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTSS
T ss_pred hhccccCCCCEEECcCCcCCCccc
Confidence 887765 9999999999998654
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=259.32 Aligned_cols=180 Identities=14% Similarity=0.223 Sum_probs=148.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-----------CcccceeeeEEEe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----------HRHLVSILGHCIL 518 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~~ 518 (640)
++|++.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5688899999999999999994 578999999997432 23467889999998886 8999999999864
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeec--
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLD-- 595 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~-- 595 (640)
... .+...++||||+ +++|.+++... ....+++..+..++.|++.||+|||+ . +|+||||||+|||++
T Consensus 98 ~~~----~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 98 KGP----NGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EET----TEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEE
T ss_pred cCC----CCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEecc
Confidence 321 234689999999 88999999763 23458999999999999999999998 5 999999999999994
Q ss_pred ----CCCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 ----KALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ----~~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..+.+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 232 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCC
Confidence 4458999999999765432211 334 89999999999999999984
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-28 Score=250.59 Aligned_cols=176 Identities=19% Similarity=0.282 Sum_probs=145.9
Q ss_pred HhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCC--CcccceeeeEEEecccCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~~ 524 (640)
..++|++.+.||+|+||.||+|+..+++.||||++..... ...+.+.+|++++++++ ||||+++++++.
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~------- 98 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI------- 98 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE-------
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee-------
Confidence 3466888999999999999999988899999999975432 23467899999999997 599999999886
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||| +.+|+|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+||++++ +.+||+|
T Consensus 99 -~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 99 -TDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp -CSSEEEEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECC
T ss_pred -cCCEEEEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEee
Confidence 3456899999 557899999975 3468999999999999999999999 69999999999999965 8999999
Q ss_pred CCCCccccCCCC----------c---------c-----------CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L---------S-----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~---------~-----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... . + .. +.++|||||||++|||++|.
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 236 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCC
Confidence 999976532211 0 1 13 77999999999999999984
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=265.21 Aligned_cols=246 Identities=17% Similarity=0.127 Sum_probs=206.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++.. +..+...+.|+.|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEID-TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCC-hHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46889999999886433 22344568999999999999998888999999999999999999866556679999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCc-------------------------------------Cc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRL-------------------------------------VL 196 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l-------------------------------------~~ 196 (640)
|++|.+++..|..|.++++|++|+|++|.+++.... +.++ ++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~ 233 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 233 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCC
Confidence 999999988888999999999999999999876432 2111 23
Q ss_pred CCeeEccCCCCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCC
Q 006570 197 LEELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274 (640)
Q Consensus 197 L~~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 274 (640)
|+.|+|++|.+++. +. .+++|+.|+|++|.+++.+|..|+++++|+.|+|++|++++ +|..+..+++|+.|+|++|
T Consensus 234 L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N 311 (597)
T 3oja_B 234 LTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 311 (597)
T ss_dssp CCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSS
T ss_pred CCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCC
Confidence 55556666666553 22 26899999999999999999999999999999999999996 5777888999999999999
Q ss_pred cCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 275 ~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++++ +|..+..+++|+.|+|++|+|++. | +..+++|+.|++++|.+++.
T Consensus 312 ~l~~-i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 312 HLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCc-cCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 9985 788889999999999999999865 3 66778999999999998864
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-27 Score=249.65 Aligned_cols=247 Identities=16% Similarity=0.104 Sum_probs=205.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|+++.++.. ++..+.....|++|+|++|.+.+..|..|+++++|++|+|++|.++...+..|.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEI-DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEE-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccccc-ChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 4688999999988543 222344568999999999999998889999999999999999999754445579999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcC-------------------cCCeeEccCCCCCCCCCCcc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLV-------------------LLEELNLGGNDFGPKFPSLS 215 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~-------------------~L~~L~L~~N~l~~~~~~~~ 215 (640)
|++|.+++..|..|.++++|++|++++|++++... ..++ +|++|++++|+++......+
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~ 225 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVN 225 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCG--GGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcccc--ccccccceeecccccccccCCCCcceEEECCCCeeeecccccc
Confidence 99999998888889999999999999999987642 3333 45556666666654444446
Q ss_pred cccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEec
Q 006570 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295 (640)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l 295 (640)
++|+.|++++|++++. ..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++ +|..+..+++|+.|++
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 7899999999999864 578899999999999999998889999999999999999999977 6767788899999999
Q ss_pred cCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 296 s~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++|+++ .+|..+..+++|+.|++++|.++..+
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~ 334 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK 334 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC
T ss_pred CCCcce-ecCccccccCcCCEEECCCCccceeC
Confidence 999998 56777888899999999999988753
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-29 Score=261.57 Aligned_cols=182 Identities=13% Similarity=0.164 Sum_probs=142.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--------CCChHHHHHHHHHHhcCC---------Cccccee
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--------RHLPQSLMQHVELLSKLR---------HRHLVSI 512 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 512 (640)
.++|+..+.||+|+||+||+|+. +|+.||||+++... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999998 68999999997643 223478899999998886 7777777
Q ss_pred eeEEEecccCC----------------------CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 006570 513 LGHCILTYQDH----------------------PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570 (640)
Q Consensus 513 ~g~~~~~~~~~----------------------~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 570 (640)
.+++......+ .......|+||||+++|++.+.+.+ ..+++..++.|+.|++.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 77654221100 0125679999999999987777642 458999999999999999
Q ss_pred hhhcc-cCCCCCeeccCCCCCceeecCCC--------------------ceEEeCCCCCccccCCCC------c-----c
Q 006570 571 VQFLH-TGVAPGIFGNNLKTENILLDKAL--------------------TAKLSGYNIPLPSKVRNT------L-----S 618 (640)
Q Consensus 571 L~yLH-~~~~~~iiHrDlk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~------~-----~ 618 (640)
|+||| + .+|+||||||+|||++.++ .+||+|||+|+....... . .
T Consensus 174 L~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 174 LAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGC
T ss_pred HHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhc
Confidence 99999 7 6999999999999999887 899999999987543211 0 2
Q ss_pred CC-CCccceehhhHH-HHHHhhc
Q 006570 619 FH-TDRSSLYKIILI-ICVITLC 639 (640)
Q Consensus 619 ~~-~~~~DvwS~Gvv-l~elltG 639 (640)
.. +.++||||+|++ .+++++|
T Consensus 251 g~~~~~~Diwsl~~~~~~~~~~g 273 (336)
T 2vuw_A 251 GDGDYQFDIYRLMKKENNNRWGE 273 (336)
T ss_dssp CCSSHHHHHHHHHHHHHTTCTTS
T ss_pred CCCccceehhhhhCCCCcccccc
Confidence 23 889999998877 6666655
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=280.05 Aligned_cols=178 Identities=21% Similarity=0.283 Sum_probs=145.0
Q ss_pred cCCCCCCccccCCccceEEEEeC--CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++..... ...
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR---HGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT---TSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC---CCC
Confidence 67889999999999999999964 58999999986432 2234578899999999999999999999864321 112
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+||||+++++|.+++.. .+++.+++.|+.|++.||+|||+ .+|+||||||+|||++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEeccc
Confidence 236999999999999988742 68999999999999999999999 699999999999999886 899999999
Q ss_pred CccccCCCCc-------------cCCCCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-------------SFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-------------~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ +..+.++|||||||++|||++|.
T Consensus 228 a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~ 273 (681)
T 2pzi_A 228 VSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDL 273 (681)
T ss_dssp CEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCC
T ss_pred chhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCC
Confidence 9866433211 12277999999999999999873
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=6e-27 Score=236.00 Aligned_cols=212 Identities=21% Similarity=0.222 Sum_probs=115.5
Q ss_pred CCCCCCCCCCcccEEeCC-CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 57 TNFCYLPSSSSLKIVCTN-SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 57 ~~~C~~~~~~~~gv~C~~-~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
.+.|.|. |+.|+. ..++.+++++++++.. |..+. ++|+.|+|++|.
T Consensus 2 ~~~C~~~-----~~~C~c~~~~~~l~~~~~~l~~i--------------------------p~~~~--~~l~~L~l~~n~ 48 (270)
T 2o6q_A 2 EALCKKD-----GGVCSCNNNKNSVDCSSKKLTAI--------------------------PSNIP--ADTKKLDLQSNK 48 (270)
T ss_dssp CCCBGGG-----TCSBEEETTTTEEECTTSCCSSC--------------------------CSCCC--TTCSEEECCSSC
T ss_pred CccCCCC-----CCCCEeCCCCCEEEccCCCCCcc--------------------------CCCCC--CCCCEEECcCCC
Confidence 4789987 455532 3456677777766321 11111 356666777777
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
+++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++|++++.++. |..+++|++|+|++|++++..+..
T Consensus 49 l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 128 (270)
T 2o6q_A 49 LSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRV 128 (270)
T ss_dssp CSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTT
T ss_pred CCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHH
Confidence 6655555666777777777777777644444456667777777777777666655 566666666666666654433321
Q ss_pred ---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCC
Q 006570 215 ---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291 (640)
Q Consensus 215 ---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 291 (640)
+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+
T Consensus 129 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 208 (270)
T 2o6q_A 129 FDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLK 208 (270)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCC
Confidence 23333333333333333333344455555555555555544444444555555555555555443333444445555
Q ss_pred EEeccCccCc
Q 006570 292 FVEISHNLLI 301 (640)
Q Consensus 292 ~L~ls~N~l~ 301 (640)
.|++++|.+.
T Consensus 209 ~L~l~~N~~~ 218 (270)
T 2o6q_A 209 MLQLQENPWD 218 (270)
T ss_dssp EEECCSSCBC
T ss_pred EEEecCCCee
Confidence 5555555443
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-27 Score=262.69 Aligned_cols=249 Identities=16% Similarity=0.056 Sum_probs=209.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|.++++|++|+|++|.++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELR-MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCC-GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccC-hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 47899999999986443 222445689999999999999988999999999999999999996 67766 899999999
Q ss_pred cccCcccc-cCCccccCCCCCCEEEccCccCCccCCCccCcCcC--CeeEccCCCC--CCCCCCcc--------------
Q 006570 155 ISSNFIYG-EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLL--EELNLGGNDF--GPKFPSLS-------------- 215 (640)
Q Consensus 155 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~-------------- 215 (640)
|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|++ ++..|..+
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 99999996 4578999999999999999999863 45556666 9999999888 55444321
Q ss_pred ----------------------------------------------------------------------cccceeeccc
Q 006570 216 ----------------------------------------------------------------------KNIVSVILRN 225 (640)
Q Consensus 216 ----------------------------------------------------------------------~~L~~L~l~~ 225 (640)
.+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 1677788888
Q ss_pred CcccccCCccc-----------------------------------------------------cCCCCccEEEccCCcc
Q 006570 226 NSLRSEIPSGL-----------------------------------------------------KNFDQLKQFDISSNNF 252 (640)
Q Consensus 226 N~l~~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~N~l 252 (640)
|+++|.+|..+ ..+++|++|++++|++
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCC
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcc
Confidence 88888888765 6788999999999999
Q ss_pred cCcCCccccCCCCCcEEEccCCcCCc--cCCccccCCCCCCEEeccCccCcccCCC-CccCCCCCceeeeccccccCccC
Q 006570 253 VGPIQSFLFSLPSILYLNLAGNQLSE--ALPVNISCSAKLNFVEISHNLLIGKLPS-CIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 253 ~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~~~~L~~L~ls~N~l~~~~p~-~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++.+|..+.++++|++|+|++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|+.+++++|.+++..+
T Consensus 366 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 366 TDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred ccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 99899999999999999999999987 3456789999999999999999985665 47888999999999999987654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-28 Score=253.79 Aligned_cols=177 Identities=15% Similarity=0.251 Sum_probs=145.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CC-cEEEEEEeecccCCChHHHHHHHHHHhcCCCcc------cceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DG-SRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH------LVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~ 521 (640)
.++|++.+.||+|+||+||+|+.. ++ +.||+|+++... ...+.+.+|++++++++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~---- 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN---- 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee----
Confidence 367888999999999999999853 44 689999997432 23467889999999998766 888888774
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee-------
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL------- 594 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl------- 594 (640)
.....++||||+ +|++.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+|||+
T Consensus 93 ----~~~~~~lv~e~~-~~~l~~~l~~-~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 93 ----FHGHMCIAFELL-GKNTFEFLKE-NNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp ----ETTEEEEEEECC-CCBHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEE
T ss_pred ----eCCeEEEEEecc-CCChHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccc
Confidence 345689999999 6688888765 233568999999999999999999998 699999999999999
Q ss_pred ------------cCCCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 595 ------------DKALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 595 ------------~~~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.++.+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 236 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCC
Confidence 66789999999999765432211 334 88999999999999999984
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=242.00 Aligned_cols=237 Identities=21% Similarity=0.204 Sum_probs=207.4
Q ss_pred CCCCCCCcccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCCh--hhhhhcCCCCC
Q 006570 60 CYLPSSSSLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDR--FFTILTKLSNL 126 (640)
Q Consensus 60 C~~~~~~~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~--~~~~l~~l~~L 126 (640)
|.|. +|.|+. ..++.|+|++|.++ .++...+...+.|+.|+|++|.+... .+..+..+++|
T Consensus 7 C~~~-----~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 80 (306)
T 2z66_A 7 CSGT-----EIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSL 80 (306)
T ss_dssp EETT-----EEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCC
T ss_pred eCCC-----EEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCccccccccccc
Confidence 6665 799964 26889999999885 33332234568999999999998743 36778889999
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCC-ccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP-MEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
++|+|++|.++ .+|..+..+++|++|+|++|.+++..+ ..+.++++|++|++++|.+++.++. +..+++|++|+|++
T Consensus 81 ~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 159 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 159 (306)
T ss_dssp CEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCC
Confidence 99999999996 578889999999999999999996555 5799999999999999999998887 89999999999999
Q ss_pred CCCCC-CCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccC
Q 006570 205 NDFGP-KFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280 (640)
Q Consensus 205 N~l~~-~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 280 (640)
|++++ ..|.. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..+..+++|++|+|++|++++..
T Consensus 160 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 239 (306)
T 2z66_A 160 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 239 (306)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCS
T ss_pred CccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccC
Confidence 99986 44543 689999999999999988999999999999999999999888888999999999999999999999
Q ss_pred CccccCCC-CCCEEeccCccCccc
Q 006570 281 PVNISCSA-KLNFVEISHNLLIGK 303 (640)
Q Consensus 281 p~~~~~~~-~L~~L~ls~N~l~~~ 303 (640)
|..+..++ +|+.|++++|.+++.
T Consensus 240 ~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 240 KQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SSSCCCCCTTCCEEECTTCCEECS
T ss_pred HHHHHhhhccCCEEEccCCCeecc
Confidence 99999884 999999999999865
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=266.06 Aligned_cols=246 Identities=16% Similarity=0.113 Sum_probs=193.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.++++++.+.. ++ .....+.|+.|++++|.+ +.+| .+ .+++|+.|++++|...+.+ .+..+++|++|+
T Consensus 285 ~~L~~L~l~~~~~~~-l~--~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 356 (606)
T 3vq2_A 285 ANVSAMSLAGVSIKY-LE--DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLD 356 (606)
T ss_dssp TTCSEEEEESCCCCC-CC--CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEE
T ss_pred CCCCEEEecCccchh-hh--hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEE
Confidence 467788888887733 22 222346788888888887 6677 45 8888888888888655544 567888888888
Q ss_pred cccCccccc--CCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-Cc---ccccceeecccCcc
Q 006570 155 ISSNFIYGE--IPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SL---SKNIVSVILRNNSL 228 (640)
Q Consensus 155 Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~---~~~L~~L~l~~N~l 228 (640)
|++|.+++. +|..+..+++|++|+|++|.+++.++.+..+++|++|++++|++.+..| .. +++|+.|++++|++
T Consensus 357 ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l 436 (606)
T 3vq2_A 357 LSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436 (606)
T ss_dssp CCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCC
T ss_pred CcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCC
Confidence 888888865 3777888888888888888888777668888888888888888877766 22 67888888888888
Q ss_pred cccCCccccCCCCccEEEccCCcccC-cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCC
Q 006570 229 RSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
++..|..+.++++|++|+|++|++++ .+|..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++.+|..
T Consensus 437 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 516 (606)
T 3vq2_A 437 KIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSH 516 (606)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGG
T ss_pred CccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHH
Confidence 88888888888888888888888887 46777888888888888888888877888888888888888888888877888
Q ss_pred ccCCCCCceeeeccccccCcc
Q 006570 308 IGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~~ 328 (640)
+..+++|+.|++++|+++..+
T Consensus 517 ~~~l~~L~~L~l~~N~l~~~p 537 (606)
T 3vq2_A 517 YNQLYSLSTLDCSFNRIETSK 537 (606)
T ss_dssp TTTCTTCCEEECTTSCCCCEE
T ss_pred ccCCCcCCEEECCCCcCcccC
Confidence 888888888888888887544
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=260.98 Aligned_cols=172 Identities=18% Similarity=0.245 Sum_probs=135.1
Q ss_pred CCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++. .+...+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--------~~~~~~ 85 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSET--------TDRFLY 85 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEE--------CSSEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEe--------cCCeEE
Confidence 3446789999999998776667999999998753 246778999999886 8999999998874 456789
Q ss_pred EEEEccCCCCHhHHhhccCCC----CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC----------
Q 006570 532 LVLEHISNGSLRDYLTDWKKK----DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---------- 597 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---------- 597 (640)
+|||||+ |+|.+++...... ....+..++.++.|++.||+|||+ .+|+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccC
Confidence 9999996 6999999753211 112344567899999999999999 699999999999999754
Q ss_pred ---CceEEeCCCCCccccCCCC------------c---------c-------CC-CCccceehhhHHHHHHhh-c
Q 006570 598 ---LTAKLSGYNIPLPSKVRNT------------L---------S-------FH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 598 ---~~~kl~DfGla~~~~~~~~------------~---------~-------~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+.+||+|||+++....... . + .. +.++|||||||++|||+| |
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g 236 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCC
Confidence 5899999999986543210 0 1 23 889999999999999998 5
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-27 Score=271.90 Aligned_cols=138 Identities=20% Similarity=0.132 Sum_probs=123.7
Q ss_pred CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCC-CccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 006570 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPL-PSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 99 ~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
...++.|+|++|.+.+..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+.+..|..|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 368999999999999998999999999999999999777777 7889999999999999999999999999999999999
Q ss_pred EccCccCCccCCC---ccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccc
Q 006570 178 VLADNLLNGSVPD---LQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGL 236 (640)
Q Consensus 178 ~L~~N~l~~~~~~---~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~ 236 (640)
+|++|.+++.+|. |.++++|++|+|++|++++..+. .+++|+.|+|++|.+++..|..+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 9999999986543 89999999999999999887653 27899999999999877665544
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-27 Score=266.26 Aligned_cols=230 Identities=18% Similarity=0.123 Sum_probs=209.0
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..+++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 68999999999999988889999999999999999999999999999999999999999999555557999999999999
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc--CCCCccEEEccCCccc
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK--NFDQLKQFDISSNNFV 253 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~ 253 (640)
++|++++.+|. |.++++|++|+|++|++++..|.. +++|+.|++++|++++..|..+. .+++|+.|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999998876 999999999999999999887764 68999999999999988777654 5689999999999999
Q ss_pred CcCCccccCC---------------------------CCCcEEEccCCcCCccCCccccCCCC--CCEEeccCccCcccC
Q 006570 254 GPIQSFLFSL---------------------------PSILYLNLAGNQLSEALPVNISCSAK--LNFVEISHNLLIGKL 304 (640)
Q Consensus 254 ~~~p~~~~~l---------------------------~~L~~L~l~~N~l~~~~p~~~~~~~~--L~~L~ls~N~l~~~~ 304 (640)
+..|..+..+ ++|+.|++++|++++..|..+..++. |+.|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 9888877654 56788899999999988998988765 999999999999999
Q ss_pred CCCccCCCCCceeeeccccccCccC
Q 006570 305 PSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 305 p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
|..+..+++|+.+++++|.+++..+
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFS 289 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECT
T ss_pred cccccCcccccEeeCCCCccCccCh
Confidence 9999999999999999999988654
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-27 Score=236.12 Aligned_cols=206 Identities=19% Similarity=0.119 Sum_probs=126.1
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45666666666555555556666666666666666655555556666666666666666665555556666666666666
Q ss_pred CccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcc
Q 006570 181 DNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF 259 (640)
Q Consensus 181 ~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 259 (640)
+|.+++..+. +..+++|++|+|++|++++. .+|..|.++++|+.|+|++|++++..+..
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSF--------------------KLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------------------CCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCccccCchhcccCCCCCEEECcCCcccee--------------------cCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 6666655553 55555555555555555431 24666666777777777777776666666
Q ss_pred ccCCCCCc----EEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 260 LFSLPSIL----YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 260 ~~~l~~L~----~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+++|+ .|++++|++++..+..+. ..+|+.|++++|++++..+..+..+++|+.+++++|.+++.
T Consensus 169 ~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp GHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred hhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 66555555 677777777654444333 34677777777777765555566677777777777766654
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-27 Score=263.80 Aligned_cols=245 Identities=16% Similarity=0.083 Sum_probs=184.6
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCC--CCccccCCCCCCE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGP--LPSKINRFWSLEV 152 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~ 152 (640)
..++.|+++++.+ +.++. +..+.|+.|++++|...+.+ .+..+++|++|+|++|.+++. +|..+..+++|++
T Consensus 307 ~~L~~L~l~~n~l-~~lp~---~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 380 (606)
T 3vq2_A 307 FKWQSLSIIRCQL-KQFPT---LDLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRH 380 (606)
T ss_dssp CCCSEEEEESCCC-SSCCC---CCCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCE
T ss_pred ccCCEEEcccccC-ccccc---CCCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccE
Confidence 3577778888777 44432 25677788888877544433 567788888888888887665 4777788888888
Q ss_pred EEcccCcccccCCccccCCCCCCEEEccCccCCccCC--CccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCc
Q 006570 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNS 227 (640)
Q Consensus 153 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~ 227 (640)
|+|++|.+. .+|..+.++++|+.|++++|++++.+| .+..+++|++|++++|++++..|.. +++|+.|++++|+
T Consensus 381 L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 459 (606)
T 3vq2_A 381 LDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNS 459 (606)
T ss_dssp EECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred eECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCc
Confidence 888888877 466777888888888888888887776 3777888888888888887766654 5778888888888
Q ss_pred ccc-cCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCC
Q 006570 228 LRS-EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306 (640)
Q Consensus 228 l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~ 306 (640)
+++ .+|..|..+++|+.|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+++|+.|++++|+|+ .+|.
T Consensus 460 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~ 538 (606)
T 3vq2_A 460 FKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKG 538 (606)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEES
T ss_pred CCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCH
Confidence 876 46777888888888888888888777777888888888888888888777778888888888888888887 5666
Q ss_pred CccCCC-CCceeeeccccccCc
Q 006570 307 CIGSNS-LNRTVVSTWNCLSGV 327 (640)
Q Consensus 307 ~~~~~~-~l~~l~l~~N~l~~~ 327 (640)
.+..++ +|+.+++++|.+.+.
T Consensus 539 ~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 539 ILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CGGGSCTTCCEEECCSCCCCCS
T ss_pred hHhhhcccCcEEEccCCCcccC
Confidence 677775 588888888877653
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-28 Score=260.09 Aligned_cols=172 Identities=18% Similarity=0.246 Sum_probs=135.5
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|...+.||+|+||+||.....+++.||||++.... .+.+.+|+++++++ +||||+++++++. ....
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~--------~~~~ 92 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEK--------DRQF 92 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEE--------ETTE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEe--------cCCE
Confidence 4577789999999999665555578999999996432 23467899999999 7999999998875 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-----CCceEEeC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-----ALTAKLSG 604 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-----~~~~kl~D 604 (640)
.|+|||||+ |+|.+++... .....+..++.++.|++.||+|||+ .+|+||||||+|||++. ...+||+|
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred EEEEEECCC-CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 899999996 5999999752 3345556678999999999999999 69999999999999953 34688999
Q ss_pred CCCCccccCCC-----------Cc------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRN-----------TL------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~-----------~~------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++...... +. ... +.++|||||||++|||+| |
T Consensus 167 FG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g 226 (432)
T 3p23_A 167 FGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEG 226 (432)
T ss_dssp TTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTS
T ss_pred ccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCC
Confidence 99997653221 00 122 668999999999999999 5
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-27 Score=246.78 Aligned_cols=178 Identities=17% Similarity=0.244 Sum_probs=131.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... ..+.+.++..+++.++||||+++++++. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~--------~ 95 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI--------T 95 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------C
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe--------c
Confidence 35678889999999999999996 46899999999754321 1233445556788889999999999986 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+ ++.+..+... ....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg 170 (318)
T 2dyl_A 96 NTDVFIAMELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFG 170 (318)
T ss_dssp SSEEEEEECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCcEEEEEecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECC
Confidence 45689999999 4456555542 245689999999999999999999971 289999999999999999999999999
Q ss_pred CCccccCCCCc---------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL---------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~---------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... ... +.++|||||||++|||++|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (318)
T 2dyl_A 171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226 (318)
T ss_dssp TC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSS
T ss_pred CchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCC
Confidence 99754321110 112 77999999999999999984
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=254.08 Aligned_cols=212 Identities=15% Similarity=0.138 Sum_probs=145.9
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.|+.|+|++|.+.+..|..|..+++|++|+|++|.+++..| ++.+++|++|+|++|.|++..+ .++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 66777777777776666777777777777777777766554 7777777777777777773322 2677777777
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc-CCCCccEEEccCCcccCcC
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK-NFDQLKQFDISSNNFVGPI 256 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~ 256 (640)
+|.|++.++. .+++|++|+|++|++++..|.. +++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|++..
T Consensus 108 ~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 185 (487)
T 3oja_A 108 NNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (487)
T ss_dssp SSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc
Confidence 7777776654 3466777777777777665543 56777777777777776666665 6777777777777777552
Q ss_pred CccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 257 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
+ +..+++|+.|+|++|+|++. |..+..+++|+.|++++|.|++ +|..+..+++|+.+++++|.+.
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 186 G--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp C--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred c--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 2 33467777777777777763 3346677777777777777774 5666777777777777777665
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-26 Score=253.34 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=80.4
Q ss_pred cceeecccCcccccCCccccCCCCccEEEccCCcccCcCC-ccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
|+.|++++|.+++. |..+..+++|+.|++++|++.+..| ..+..+++|++|++++|++++..|..+..+++|+.|+++
T Consensus 375 L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 453 (570)
T 2z63_A 375 LKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453 (570)
T ss_dssp CCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred cCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECc
Confidence 33344444444432 2236667777777777888777655 467788888888888888888778888888888888888
Q ss_pred CccCc-ccCCCCccCCCCCceeeeccccccCccC
Q 006570 297 HNLLI-GKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 297 ~N~l~-~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+|+++ +.+|..+..+++|+.|++++|.+++..+
T Consensus 454 ~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 487 (570)
T 2z63_A 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487 (570)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred CCcCccccchhhhhcccCCCEEECCCCccccCCh
Confidence 88887 5678888888888888888888877644
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=244.51 Aligned_cols=221 Identities=18% Similarity=0.152 Sum_probs=191.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcC-cCCCCcccc-------CCCCCCEEEcccCcccccCCccc--c
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGL-WGPLPSKIN-------RFWSLEVLNISSNFIYGEIPMEI--T 169 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~--~ 169 (640)
..++.+++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ .
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 5788999999998 667766554 99999999999 567887776 89999999999999999999987 8
Q ss_pred CCCCCCEEEccCccCCccCCCccCc-----CcCCeeEccCCCCCCCCCCc---ccccceeecccCccccc--CCccc--c
Q 006570 170 SLKNLKSIVLADNLLNGSVPDLQRL-----VLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSE--IPSGL--K 237 (640)
Q Consensus 170 ~l~~L~~L~L~~N~l~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~--~p~~~--~ 237 (640)
.+++|++|+|++|++++.++.+..+ ++|++|+|++|++++..|.. +++|+.|+|++|++.+. +|..+ .
T Consensus 119 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred cCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 9999999999999999994447777 99999999999999888654 78999999999999876 34445 8
Q ss_pred CCCCccEEEccCCcccCc--CC-ccccCCCCCcEEEccCCcCCccCC-ccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 238 NFDQLKQFDISSNNFVGP--IQ-SFLFSLPSILYLNLAGNQLSEALP-VNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
++++|++|+|++|+|++. ++ ..+..+++|++|+|++|++++.+| ..+..+++|+.|++++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 999999999999999842 22 445688999999999999999775 45677899999999999999 7888877 89
Q ss_pred CceeeeccccccCc
Q 006570 314 NRTVVSTWNCLSGV 327 (640)
Q Consensus 314 l~~l~l~~N~l~~~ 327 (640)
|+.|++++|++++.
T Consensus 276 L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN 289 (312)
T ss_dssp EEEEECCSSCCCSC
T ss_pred ceEEECCCCCCCCC
Confidence 99999999999986
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=256.60 Aligned_cols=179 Identities=21% Similarity=0.149 Sum_probs=150.2
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 68999999999999888999999999999999999999988899999999999999999999777777999999999999
Q ss_pred cCccCCcc--CCCccCcCcCCeeEccCCCCCCCCCC-c---ccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 180 ADNLLNGS--VPDLQRLVLLEELNLGGNDFGPKFPS-L---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 180 ~~N~l~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~-~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
++|.+++. ++.+.++++|++|++++|++.+.+|. . +++|++|++++|++++.+|..++++++|+.|++++|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 99999964 34599999999999999996555542 2 789999999999999999999988777777777766665
Q ss_pred CcCCccccCCCCCcEEEccCCcCCc
Q 006570 254 GPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 254 ~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
...+..+..+++|++|++++|++++
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ccchhhHhhcccccEEEccCCcccc
Confidence 3222223456666666666666655
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-26 Score=254.99 Aligned_cols=247 Identities=16% Similarity=0.126 Sum_probs=207.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
..++.|+++++.++. ++.. .... .++.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|+
T Consensus 282 ~~L~~L~l~~~~l~~-l~~~-~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~ 353 (570)
T 2z63_A 282 TNVSSFSLVSVTIER-VKDF-SYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLD 353 (570)
T ss_dssp TTCSEEEEESCEECS-CCBC-CSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEE
T ss_pred CcccEEEecCccchh-hhhh-hccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEe
Confidence 356677777776642 2211 1223 7788888888775 4443 5778888888888888776664 7889999999
Q ss_pred cccCcccccC--CccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcc
Q 006570 155 ISSNFIYGEI--PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSL 228 (640)
Q Consensus 155 Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l 228 (640)
|++|.+++.. |..+.++++|++|++++|.+++.++.+..+++|++|++++|++++..|. .+++|+.|++++|.+
T Consensus 354 l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l 433 (570)
T 2z63_A 354 LSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 433 (570)
T ss_dssp CCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCC
T ss_pred CcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcc
Confidence 9999998654 7788899999999999999998888899999999999999999877652 268999999999999
Q ss_pred cccCCccccCCCCccEEEccCCccc-CcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCC
Q 006570 229 RSEIPSGLKNFDQLKQFDISSNNFV-GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
++..|..|.++++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++.+|..
T Consensus 434 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 513 (570)
T 2z63_A 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGI 513 (570)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHH
Confidence 9999999999999999999999997 678899999999999999999999988999999999999999999999988888
Q ss_pred ccCCCCCceeeeccccccCccC
Q 006570 308 IGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+..+++|+.+++++|.+++..+
T Consensus 514 ~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 514 FDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TTTCTTCCEEECCSSCBCCCTT
T ss_pred hhcccCCcEEEecCCcccCCCc
Confidence 9999999999999999988654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-25 Score=222.13 Aligned_cols=200 Identities=20% Similarity=0.164 Sum_probs=181.8
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEcc
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLG 203 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~ 203 (640)
+++.+++++|+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.++..++. |.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5788999999996 5787665 6899999999999977777899999999999999999988887 7899999999999
Q ss_pred CCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccC
Q 006570 204 GNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280 (640)
Q Consensus 204 ~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 280 (640)
+|++++..+.. +++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 99999877654 689999999999999888888999999999999999999887778999999999999999999977
Q ss_pred CccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 281 PVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 281 p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..|..+++|+.|++++|++++..+..+..+++|+.+++++|.+...
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 77899999999999999999987777899999999999999987653
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=226.11 Aligned_cols=203 Identities=18% Similarity=0.161 Sum_probs=177.9
Q ss_pred hhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCC
Q 006570 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLE 198 (640)
Q Consensus 119 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 198 (640)
.+.++++|+.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.|++.++. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 3678889999999999995 5776664 6899999999999988888899999999999999999987664 7889999
Q ss_pred eeEccCCCCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 199 ELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 199 ~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
+|+|++|+++..... .+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 999999999754332 268999999999999987788899999999999999999988888889999999999999999
Q ss_pred CccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 277 SEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 277 ~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
++..+..|..+++|+.|+|++|+|+ .+|..+.....++.+++++|.+..
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 9877777888999999999999998 688888888899999999998753
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=251.29 Aligned_cols=254 Identities=18% Similarity=0.187 Sum_probs=206.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++ +++..+...++|++|+|++|.+.+..+..|.+|++|++|+|++|++++..+..|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 76 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 478899999998854 3333345568999999999999888888999999999999999999887777899999999999
Q ss_pred cccCcccc-cCCccccCCCCCCEEEccCccCCccCCC-cc----------------------------------------
Q 006570 155 ISSNFIYG-EIPMEITSLKNLKSIVLADNLLNGSVPD-LQ---------------------------------------- 192 (640)
Q Consensus 155 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~---------------------------------------- 192 (640)
|++|.+++ .+|..++++++|++|+|++|+|++..+. +.
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999985 4688899999999999999987654321 00
Q ss_pred --------------------------------------------------------------------------------
Q 006570 193 -------------------------------------------------------------------------------- 192 (640)
Q Consensus 193 -------------------------------------------------------------------------------- 192 (640)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ------------------------------------------------------CcCcCCeeEccCCCCCCC--C-----
Q 006570 193 ------------------------------------------------------RLVLLEELNLGGNDFGPK--F----- 211 (640)
Q Consensus 193 ------------------------------------------------------~l~~L~~L~L~~N~l~~~--~----- 211 (640)
.+++|+.|++++|.+... .
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 123344444444443100 0
Q ss_pred ------------------------------------------C----CcccccceeecccCcccccCCccccCCCCccEE
Q 006570 212 ------------------------------------------P----SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQF 245 (640)
Q Consensus 212 ------------------------------------------~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 245 (640)
+ ..+.+++.++++.|.+++..|..+..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 0 002455667788888988889999999999999
Q ss_pred EccCCcc-cCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccc
Q 006570 246 DISSNNF-VGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCL 324 (640)
Q Consensus 246 ~Ls~N~l-~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l 324 (640)
+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|++
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 9999985 456788899999999999999999999999999999999999999999998899999999999999999999
Q ss_pred cCccC
Q 006570 325 SGVNT 329 (640)
Q Consensus 325 ~~~~~ 329 (640)
++.++
T Consensus 555 ~~~~~ 559 (635)
T 4g8a_A 555 MTSKK 559 (635)
T ss_dssp CBCCS
T ss_pred CCCCH
Confidence 98766
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=239.40 Aligned_cols=213 Identities=15% Similarity=0.154 Sum_probs=153.4
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
+.++.|+|++|.+.+..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++. | .+++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcCEEEC
Confidence 467777888877777777777788888888888887766544 77777888888888877732 2 2377788888
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc-CCCCccEEEccCCcccCc
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK-NFDQLKQFDISSNNFVGP 255 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 255 (640)
++|++++.++. .+++|++|+|++|++++..+.. +++|+.|+|++|++++..|..+. .+++|++|+|++|++++.
T Consensus 107 ~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 184 (317)
T 3o53_A 107 ANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (317)
T ss_dssp CSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc
Confidence 88877776654 2567778888888877665543 56777788888888776666663 677788888888887754
Q ss_pred CCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 256 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
|. ...+++|++|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|+.+++++|.++
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 185 -KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCB
T ss_pred -cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCcc
Confidence 22 3347778888888888776 4444777777888888888777 45667777777888888877776
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=236.16 Aligned_cols=219 Identities=20% Similarity=0.124 Sum_probs=165.5
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.++++.+.+.......+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 34445566666555555666777788888888888877767778888888888888888876554 7788888888888
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 260 (640)
+|++++.++ .++|++|++++|++++..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..|..+
T Consensus 89 ~n~l~~l~~----~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 89 NNYVQELLV----GPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp SSEEEEEEE----CTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred CCccccccC----CCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 888876553 3788888888888887777777888888888888887777778888888888888888887766666
Q ss_pred c-CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 261 F-SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 261 ~-~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
. .+++|++|+|++|++++. |. ...+++|+.|++++|++++. |..+..+++|+.|++++|.+++.+
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l~ 230 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIE 230 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEEC
T ss_pred hhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccchh
Confidence 3 678888888888888764 32 33478888888888888854 444777888888888888887643
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=242.75 Aligned_cols=228 Identities=17% Similarity=0.133 Sum_probs=189.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.+++. ++..+...+.|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 52 ~~L~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 52 EAVKSLDLSNNRITYI-SNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp TTCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred ccCcEEECCCCcCccc-CHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 4789999999988543 222344568999999999999888888999999999999999999765445589999999999
Q ss_pred cccCcccccCCc--cccCCCCCCEEEccCc-cCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCc
Q 006570 155 ISSNFIYGEIPM--EITSLKNLKSIVLADN-LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNS 227 (640)
Q Consensus 155 Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N-~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~ 227 (640)
|++|.++ .+|. .+.++++|++|++++| .+++.++. |.++++|++|++++|++++..|.. +++|++|++++|+
T Consensus 131 L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 131 LLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp CTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred CCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 9999999 5555 7899999999999999 47777665 899999999999999998877765 5788999999999
Q ss_pred ccccCCccccCCCCccEEEccCCcccCc-------------------------------CCccccCCCCCcEEEccCCcC
Q 006570 228 LRSEIPSGLKNFDQLKQFDISSNNFVGP-------------------------------IQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 228 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-------------------------------~p~~~~~l~~L~~L~l~~N~l 276 (640)
++...+..+..+++|+.|+|++|++++. +|..+..+++|++|+|++|++
T Consensus 210 l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l 289 (353)
T 2z80_A 210 HILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQL 289 (353)
T ss_dssp STTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCC
T ss_pred cccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCC
Confidence 9744434455688999999999999874 345577899999999999999
Q ss_pred CccCCcc-ccCCCCCCEEeccCccCcccCC
Q 006570 277 SEALPVN-ISCSAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 277 ~~~~p~~-~~~~~~L~~L~ls~N~l~~~~p 305 (640)
+. +|.. |..+++|+.|++++|++++..|
T Consensus 290 ~~-i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 290 KS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred Cc-cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 86 5555 6899999999999999987654
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=251.90 Aligned_cols=200 Identities=22% Similarity=0.157 Sum_probs=181.5
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCee
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEEL 200 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 200 (640)
..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.|++.++. ++|++|
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L 104 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETL 104 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEE
Confidence 344589999999999998888899999999999999999997766 99999999999999999987654 899999
Q ss_pred EccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcccc-CCCCCcEEEccCCcCCcc
Q 006570 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF-SLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 201 ~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~ 279 (640)
+|++|.+++..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|+|++.+|..+. .+++|+.|+|++|.|++.
T Consensus 105 ~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 105 HAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp ECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred ECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 9999999998888899999999999999999999999999999999999999998888886 799999999999999886
Q ss_pred CCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
|. +..+++|+.|+|++|.|++.+| .+..+++|+.|++++|.+++.++
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~ 231 (487)
T 3oja_A 185 -KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEK 231 (487)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECT
T ss_pred -cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccch
Confidence 33 4468999999999999997555 58899999999999999998543
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-25 Score=237.12 Aligned_cols=230 Identities=17% Similarity=0.099 Sum_probs=181.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+++++.+++. + .....+.|++|+|++|.+.+. | ++.+++|++|+|++|.+++. | ++++++|++|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp TTCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 5788899999988653 2 233457899999999988774 3 88999999999999999764 4 88999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-CcccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p 233 (640)
|++|.+++ +| ++.+++|++|++++|++++. .+.++++|++|++++|+..+.++ ..+++|+.|++++|++++ +|
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~ 186 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD 186 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec
Confidence 99999986 55 88999999999999999985 38888999999999996555543 337889999999999986 45
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCC-
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNS- 312 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~- 312 (640)
+..+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++++|++++..+..+..+.
T Consensus 187 --l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~ 258 (457)
T 3bz5_A 187 --VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTT 258 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCE
T ss_pred --cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCE
Confidence 78888999999999999875 37888999999999999988 56 78889999999999999886554444433
Q ss_pred ------CCceeeeccccccCc
Q 006570 313 ------LNRTVVSTWNCLSGV 327 (640)
Q Consensus 313 ------~l~~l~l~~N~l~~~ 327 (640)
+++.+++++|.+.|.
T Consensus 259 L~l~~n~L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 259 LHCIQTDLLEIDLTHNTQLIY 279 (457)
T ss_dssp EECTTCCCSCCCCTTCTTCCE
T ss_pred EeccCCCCCEEECCCCccCCc
Confidence 334444454444443
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=225.94 Aligned_cols=214 Identities=20% Similarity=0.184 Sum_probs=166.0
Q ss_pred cccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc
Q 006570 103 SQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182 (640)
Q Consensus 103 ~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 182 (640)
..+++..+.+.+. ..+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + +.+.++++|++|+|++|
T Consensus 22 ~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n 95 (272)
T 3rfs_A 22 IKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGN 95 (272)
T ss_dssp HHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTS
T ss_pred HHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCC
Confidence 3344555444333 23556778888888888874 333 47788888888888888875 3 36788888888888888
Q ss_pred cCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCc
Q 006570 183 LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258 (640)
Q Consensus 183 ~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 258 (640)
.+++.++. |.++++|++|+|++|++++..+.. +++|+.|++++|++++..|..|.++++|+.|+|++|++++..+.
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 175 (272)
T 3rfs_A 96 QLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHH
Confidence 88887776 688888888888888888776653 57888888888888877777788888889999999988887777
Q ss_pred cccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
.+..+++|++|+|++|++++..|..+..+++|+.|++++|.+.+..| .++.+++..|.++|..|
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-------~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 176 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVR 239 (272)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-------TTHHHHHHHHHTGGGBB
T ss_pred HhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-------HHHHHHHHHHhCCCccc
Confidence 78888888999999998888777778888888999998888876544 57888888888888766
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=226.08 Aligned_cols=204 Identities=21% Similarity=0.189 Sum_probs=178.9
Q ss_pred CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 99 ~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
...++.|++++|.+... ..+..+++|++|+|++|.+++ + +.+..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 36788899999887542 358899999999999999976 3 4799999999999999999977777789999999999
Q ss_pred ccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 179 L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
|++|++++.++. |..+++|++|+|++|++++..+.. +++|+.|++++|++++..|..|..+++|+.|+|++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 999999998887 889999999999999999877754 6899999999999998878788999999999999999999
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
..|..+..+++|++|+|++|.+.+. +++|+.|+++.|.++|.+|..++.+..
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 8888889999999999999998763 557889999999999999998876643
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=231.53 Aligned_cols=240 Identities=21% Similarity=0.217 Sum_probs=206.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.++.. + .+...+.|++|+|++|.+.+..+ +..+++|+.|++++|.....++ .+..+++|++|+
T Consensus 88 ~~L~~L~L~~n~i~~~-~--~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~ 161 (347)
T 4fmz_A 88 VKLTNLYIGTNKITDI-S--ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLT 161 (347)
T ss_dssp TTCCEEECCSSCCCCC-G--GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEE
T ss_pred CcCCEEEccCCcccCc-h--HHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEE
Confidence 5789999999988542 1 23445899999999999876544 9999999999999997766555 499999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC-cccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p 233 (640)
+++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+- .+++|+.|++++|++++..+
T Consensus 162 l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~ 238 (347)
T 4fmz_A 162 VTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSP 238 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG
T ss_pred ecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCCcc
Confidence 99999985444 8899999999999999998766 88999999999999999876652 37899999999999986544
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+..+++
T Consensus 239 --~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 312 (347)
T 4fmz_A 239 --LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312 (347)
T ss_dssp --GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTT
T ss_pred --hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhcccc
Confidence 88999999999999999864 4688999999999999999874 35888999999999999999989999999999
Q ss_pred CceeeeccccccCccC
Q 006570 314 NRTVVSTWNCLSGVNT 329 (640)
Q Consensus 314 l~~l~l~~N~l~~~~~ 329 (640)
|+.+++++|++++..+
T Consensus 313 L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 313 LTTLFLSQNHITDIRP 328 (347)
T ss_dssp CSEEECCSSSCCCCGG
T ss_pred CCEEEccCCccccccC
Confidence 9999999999998765
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-25 Score=229.41 Aligned_cols=238 Identities=17% Similarity=0.244 Sum_probs=204.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.++...+ +...+.|++|+|++|.+.+. +.+.++++|++|+|++|.+++ +|. +..+++|++|+
T Consensus 66 ~~L~~L~l~~n~i~~~~~---~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~ 138 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISP---LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLN 138 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCccEEEccCCccccchh---hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccC-chh-hccCCceeEEE
Confidence 579999999998854321 44568999999999988763 469999999999999999965 454 99999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-CcccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p 233 (640)
+++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|++.+..+ ..+++|+.|++++|.+++..+
T Consensus 139 l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~ 216 (347)
T 4fmz_A 139 LGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP 216 (347)
T ss_dssp CTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG
T ss_pred CCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch
Confidence 99997764544 49999999999999999998766 8899999999999999987654 237899999999999986544
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
+..+++|+.|++++|++++..+ +..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..+..+++
T Consensus 217 --~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~ 288 (347)
T 4fmz_A 217 --VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQ 288 (347)
T ss_dssp --GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTT
T ss_pred --hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCC
Confidence 8899999999999999996544 89999999999999999873 4688999999999999999864 45888999
Q ss_pred CceeeeccccccCccC
Q 006570 314 NRTVVSTWNCLSGVNT 329 (640)
Q Consensus 314 l~~l~l~~N~l~~~~~ 329 (640)
|+.+++++|.+++..+
T Consensus 289 L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 289 LNSLFLNNNQLGNEDM 304 (347)
T ss_dssp CSEEECCSSCCCGGGH
T ss_pred CCEEECcCCcCCCcCh
Confidence 9999999999987654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=228.85 Aligned_cols=220 Identities=18% Similarity=0.129 Sum_probs=182.2
Q ss_pred cccccccCccCCCChh-hh--hhcCCCCCcEeecccCcCcCCCCccc--cCCCCCCEEEcccCcccccCC----ccccCC
Q 006570 101 SASQQSLSANFNIDRF-FT--ILTKLSNLKVLSLVSLGLWGPLPSKI--NRFWSLEVLNISSNFIYGEIP----MEITSL 171 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~-~~--~l~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l 171 (640)
.++.+.+.++.+.... .. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4556666666554321 11 22345779999999999999999988 999999999999999998666 345679
Q ss_pred CCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCC-------CCCcccccceeecccCcccccCCc----cccCC
Q 006570 172 KNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPK-------FPSLSKNIVSVILRNNSLRSEIPS----GLKNF 239 (640)
Q Consensus 172 ~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~-------~~~~~~~L~~L~l~~N~l~~~~p~----~~~~l 239 (640)
++|++|+|++|++++.++. |..+++|++|+|++|++.+. ....+++|++|+|++|+++. +|. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999999876 89999999999999998642 22347899999999999973 333 25788
Q ss_pred CCccEEEccCCcccCcCCccccCC---CCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCce
Q 006570 240 DQLKQFDISSNNFVGPIQSFLFSL---PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRT 316 (640)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~ 316 (640)
++|++|||++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999999888888777 69999999999998 5787775 8999999999999964 44 677899999
Q ss_pred eeeccccccC
Q 006570 317 VVSTWNCLSG 326 (640)
Q Consensus 317 l~l~~N~l~~ 326 (640)
|++++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999875
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=235.76 Aligned_cols=233 Identities=18% Similarity=0.101 Sum_probs=195.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++. +....+.|++|+|++|.+.+. + ++++++|++|+|++|.+++ +| ++.+++|++|+
T Consensus 64 ~~L~~L~Ls~n~l~~~----~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~ 133 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL----DLSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLN 133 (457)
T ss_dssp TTCSEEECCSSCCSCC----CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCeE----ccccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEE
Confidence 5789999999998663 244568999999999998875 3 8999999999999999977 55 89999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 234 (640)
|++|.+++ +| ++++++|++|++++|...+.+ .+..+++|++|++++|++++.....+++|+.|++++|++++.
T Consensus 134 l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~--- 206 (457)
T 3bz5_A 134 CARNTLTE-ID--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKL--- 206 (457)
T ss_dssp CTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSCC---
T ss_pred CCCCccce-ec--cccCCcCCEEECCCCCccccc-ccccCCcCCEEECCCCccceeccccCCCCCEEECcCCcCCee---
Confidence 99999996 44 889999999999999766655 588899999999999999986545578999999999999875
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCC-------CCCEEeccCccCcccCCCC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSA-------KLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~-------~L~~L~ls~N~l~~~~p~~ 307 (640)
.++.+++|+.|++++|++++ +| +..+++|++|++++|++++..+..+..+. +|+.|++++|.+.+.+|
T Consensus 207 ~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~-- 281 (457)
T 3bz5_A 207 DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ-- 281 (457)
T ss_dssp CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--
T ss_pred ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--
Confidence 48899999999999999997 56 88899999999999999987666665554 56677777777777776
Q ss_pred ccCCCCCceeeeccccccCccC
Q 006570 308 IGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++.+++|+.+++++|...+..|
T Consensus 282 ~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 282 AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp CTTCTTCCCCCCTTCTTCCEEE
T ss_pred ccccccCCEEECCCCcccceec
Confidence 4567888888888888776654
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=236.99 Aligned_cols=237 Identities=22% Similarity=0.252 Sum_probs=139.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++..+ ......|++|+|++|.+.+..+ +.++++|++|+|++|.+++. |. +.++++|++|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 140 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLE 140 (466)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCEEECCCCccCCchh---hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEE
Confidence 467778888887754321 3345778888888887766554 77888888888888887554 33 77788888888
Q ss_pred cccCcccccCCc--------------------cccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC-
Q 006570 155 ISSNFIYGEIPM--------------------EITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS- 213 (640)
Q Consensus 155 Ls~N~l~~~~p~--------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~- 213 (640)
|++|.+.+ +|. .+.++++|+.|++++|.+++. +.+..+++|++|++++|++++..|.
T Consensus 141 l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~ 218 (466)
T 1o6v_A 141 LSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI-SVLAKLTNLESLIATNNQISDITPLG 218 (466)
T ss_dssp EEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGGGG
T ss_pred CCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-hhhccCCCCCEEEecCCccccccccc
Confidence 88887774 332 134445555555555555443 2355555555555555555544432
Q ss_pred cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEE
Q 006570 214 LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293 (640)
Q Consensus 214 ~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L 293 (640)
.+++|+.|++++|++++. +.+..+++|+.|++++|++++..| +..+++|++|++++|++++..| +..+++|+.|
T Consensus 219 ~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 292 (466)
T 1o6v_A 219 ILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 292 (466)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred ccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeE
Confidence 145555555555555532 245555556666666665554433 5555566666666666554332 5555566666
Q ss_pred eccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 294 EISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 294 ~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++++|++++..| +..+++|+.|++++|++++..
T Consensus 293 ~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCG
T ss_pred EcCCCcccCchh--hcCCCCCCEEECcCCcCCCch
Confidence 666666554333 455556666666666555543
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-26 Score=246.98 Aligned_cols=186 Identities=15% Similarity=0.141 Sum_probs=135.2
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCC-ccccee---------eeEE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRH-RHLVSI---------LGHC 516 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l---------~g~~ 516 (640)
.+|...+.||+|+||+||+|+ ..+|+.||||++..... ...+.+.+|+.+++.++| +|.... ...+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 345667899999999999999 56799999999874322 235789999999999987 322111 1111
Q ss_pred Eecc--------cC-CCCCCCeEEEEEEccCCCCHhHHhhcc----CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCee
Q 006570 517 ILTY--------QD-HPNTGSTVFLVLEHISNGSLRDYLTDW----KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (640)
Q Consensus 517 ~~~~--------~~-~~~~~~~~~lv~Ey~~~GsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 583 (640)
.... .+ ........+++|+++ +|+|.++++.. .....+++..++.++.|+++||+|||+ .+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 1000 00 000123467777776 67999998521 224457888999999999999999998 7999
Q ss_pred ccCCCCCceeecCCCceEEeCCCCCccccCCCC------c---------c------C--C-CCccceehhhHHHHHHhhc
Q 006570 584 GNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------L---------S------F--H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 584 HrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------~---------~------~--~-~~~~DvwS~Gvvl~elltG 639 (640)
||||||+|||++.++.+||+|||+++....... + . . . +.++|||||||++|||+||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 999999999999999999999999875432211 0 0 1 1 5699999999999999998
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 314 ~ 314 (413)
T 3dzo_A 314 D 314 (413)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-26 Score=251.76 Aligned_cols=165 Identities=13% Similarity=0.115 Sum_probs=113.0
Q ss_pred ccccCCccceEEEE-eCCCcEEEEEEeecccC----------CChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR----------HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
..+.|+.|.+..++ ...|+.+|||.+..... ...++|.+|+++|+++ .|+||+++++++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e-------- 312 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE-------- 312 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE--------
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--------
Confidence 35566666666554 33588999999975421 1235799999999999 7999999999884
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
++...||||||++||+|.++|.. ..+++.. +|+.||+.||+|+|+ .+||||||||+|||+++++.+||+||
T Consensus 313 d~~~~yLVMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 313 NAQSGWLVMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp CSSEEEEEEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCC
T ss_pred ECCEEEEEEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeec
Confidence 45679999999999999999974 4456653 588999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|+|+........ .++ ..++|+||+|++++++.+|
T Consensus 384 GlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 384 GSIVTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQP 434 (569)
T ss_dssp TTEESCC---CCSHHHHHHHHHHHHHHC-----------------CCCCTT
T ss_pred ccCeeCCCCCccccCceechhhccHHHhCCCCCCcccccccccchhhhccc
Confidence 999876543321 233 7789999999998887654
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-25 Score=244.33 Aligned_cols=253 Identities=21% Similarity=0.194 Sum_probs=152.2
Q ss_pred CCCCCCCCCCCCCCCC---CcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCC
Q 006570 50 LQGWTDWTNFCYLPSS---SSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNL 126 (640)
Q Consensus 50 l~~W~~~~~~C~~~~~---~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L 126 (640)
+..|....++|.|.+. -...+.|....++.|++++++++ .++. ...+.|+.|+|++|.+.. +|. .+++|
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~---~l~~~L~~L~L~~N~l~~-lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD---CLPAHITTLVIPDNNLTS-LPA---LPPEL 83 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS---CCCTTCSEEEECSCCCSC-CCC---CCTTC
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccCh---hhCCCCcEEEecCCCCCC-CCC---cCCCC
Confidence 3456655677776420 00012343345677777777764 2221 111566666666666543 333 45666
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCcccc-----------------CCCCCCEEEccCccCCccCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT-----------------SLKNLKSIVLADNLLNGSVP 189 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----------------~l~~L~~L~L~~N~l~~~~~ 189 (640)
++|+|++|.++ .+|. .+++|++|+|++|.|++ +|..+. .+++|++|+|++|+|++.++
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l~~ 158 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPA 158 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCCCCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCcCC
Confidence 66666666664 3444 44555555555555552 332110 12455555555555555332
Q ss_pred C---ccCc--------------CcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcc
Q 006570 190 D---LQRL--------------VLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNF 252 (640)
Q Consensus 190 ~---~~~l--------------~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 252 (640)
. +..+ ++|+.|+|++|++++ +|..+++|+.|++++|.++ .+|.. +++|+.|+|++|+|
T Consensus 159 ~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L 233 (622)
T 3g06_A 159 LPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRL 233 (622)
T ss_dssp CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCC
T ss_pred ccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCcc
Confidence 1 1111 444555555555443 2333445555555555554 23322 36788899999988
Q ss_pred cCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 253 VGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 253 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++..+
T Consensus 234 ~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 234 TS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 301 (622)
T ss_dssp SC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHH
T ss_pred Cc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCH
Confidence 86 55 456889999999999975 665 5688999999999999 778889999999999999999987654
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=232.27 Aligned_cols=237 Identities=22% Similarity=0.207 Sum_probs=173.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++.++.+.. ++. ......|++|+|++|.+.+..+ +.++++|++|+|++|.+++..| ++++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-IDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Ccc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 478889999887743 221 2335799999999999877655 9999999999999999976544 99999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCC--------------------CccCcCcCCeeEccCCCCCCCCCC-
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--------------------DLQRLVLLEELNLGGNDFGPKFPS- 213 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--------------------~~~~l~~L~~L~L~~N~l~~~~~~- 213 (640)
|++|.+++. |. +.++++|++|++++|.+++... .+.++++|++|++++|++++...-
T Consensus 119 L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~l~ 196 (466)
T 1o6v_A 119 LFNNQITDI-DP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 196 (466)
T ss_dssp CCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred CCCCCCCCC-hH-HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCChhhc
Confidence 999999954 43 8999999999999999987532 144556666667777766543221
Q ss_pred cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEE
Q 006570 214 LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293 (640)
Q Consensus 214 ~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L 293 (640)
.+++|+.|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|
T Consensus 197 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 270 (466)
T 1o6v_A 197 KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270 (466)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred cCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEE
Confidence 15667777777777765544 56667777777777777643 346677777777777777766444 6677777777
Q ss_pred eccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 294 EISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 294 ~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++++|++++..| +..+++|+.|++++|.+++..
T Consensus 271 ~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 303 (466)
T 1o6v_A 271 KLGANQISNISP--LAGLTALTNLELNENQLEDIS 303 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG
T ss_pred ECCCCccCcccc--ccCCCccCeEEcCCCcccCch
Confidence 777777775443 666777777777777777654
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.8e-24 Score=229.03 Aligned_cols=226 Identities=23% Similarity=0.283 Sum_probs=152.6
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.+++ ++ .+...+.|++|++++|.+.+ +|.. .++|++|+|++|.+++ +| .++++++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 468889999988865 33 24445788888888888765 4433 3578888888888866 56 578888888888
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 234 (640)
+++|.+++ +|... ++|++|++++|.++. +|.+..+++|++|++++|++++ +|..+++|+.|++++|++++ +|.
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~-l~~ 274 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILEE-LPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPE 274 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCC
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCCc-ccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccc-cCc
Confidence 88888774 55432 477777777777773 4457777777777777777765 34445666666666666664 443
Q ss_pred cccCCCCccEEEccCCcccC--cCCccc-------------cCC-CCCcEEEccCCcCCccCCccccCCCCCCEEeccCc
Q 006570 235 GLKNFDQLKQFDISSNNFVG--PIQSFL-------------FSL-PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~--~~p~~~-------------~~l-~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N 298 (640)
. +++|+.|++++|++++ .+|..+ ..+ ++|++|++++|++++ +|.. +++|+.|++++|
T Consensus 275 ~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N 347 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFN 347 (454)
T ss_dssp C---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred c---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCC
Confidence 2 2455555555555554 222211 122 478888888888876 5553 478888888888
Q ss_pred cCcccCCCCccCCCCCceeeeccccccCc
Q 006570 299 LLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 299 ~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+++ .+|. .+++|+.+++++|.+++.
T Consensus 348 ~l~-~lp~---~l~~L~~L~L~~N~l~~l 372 (454)
T 1jl5_A 348 HLA-EVPE---LPQNLKQLHVEYNPLREF 372 (454)
T ss_dssp CCS-CCCC---CCTTCCEEECCSSCCSSC
T ss_pred ccc-cccc---hhhhccEEECCCCCCCcC
Confidence 888 4665 367888888888888873
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-24 Score=228.38 Aligned_cols=222 Identities=22% Similarity=0.272 Sum_probs=172.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.+++ ++.. ...|+.|++++|.+.+ +|. -.++|++|+|++|.+++ +| .|+++++|++|+
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 467788888887765 3221 2578888888887754 221 12689999999999976 77 599999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 234 (640)
+++|++++ +|..+ .+|++|++++|++++. |++.++++|++|++++|++++ +|...++|+.|++++|+++ .+|
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~-~lp- 231 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILE-ELP- 231 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCS-SCC-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCcC-ccccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCC-ccc-
Confidence 99999984 67554 5899999999999984 579999999999999999986 5666679999999999998 677
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l 314 (640)
.++.+++|+.|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|++++. |.. .+++
T Consensus 232 ~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L 299 (454)
T 1jl5_A 232 ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNL 299 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTC
T ss_pred ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcC
Confidence 48899999999999999986 4543 4789999999999987 5653 37889999999998872 211 1467
Q ss_pred ceeeeccccccCc
Q 006570 315 RTVVSTWNCLSGV 327 (640)
Q Consensus 315 ~~l~l~~N~l~~~ 327 (640)
+.+++++|.+++.
T Consensus 300 ~~L~l~~N~l~~i 312 (454)
T 1jl5_A 300 YYLNASSNEIRSL 312 (454)
T ss_dssp CEEECCSSCCSEE
T ss_pred CEEECcCCcCCcc
Confidence 7777777777763
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.2e-25 Score=224.99 Aligned_cols=198 Identities=16% Similarity=0.113 Sum_probs=173.1
Q ss_pred ccccccccCccCCCChhhhhh--cCCCCCcEeecccCcCcCCCC----ccccCCCCCCEEEcccCcccccCCccccCCCC
Q 006570 100 FSASQQSLSANFNIDRFFTIL--TKLSNLKVLSLVSLGLWGPLP----SKINRFWSLEVLNISSNFIYGEIPMEITSLKN 173 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l--~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 173 (640)
..|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|.+.+..|..|.++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 459999999999999999888 999999999999999988766 44567999999999999999888899999999
Q ss_pred CCEEEccCccCCc---cCCC--ccCcCcCCeeEccCCCCCCCCC------CcccccceeecccCcccccCCccccCC---
Q 006570 174 LKSIVLADNLLNG---SVPD--LQRLVLLEELNLGGNDFGPKFP------SLSKNIVSVILRNNSLRSEIPSGLKNF--- 239 (640)
Q Consensus 174 L~~L~L~~N~l~~---~~~~--~~~l~~L~~L~L~~N~l~~~~~------~~~~~L~~L~l~~N~l~~~~p~~~~~l--- 239 (640)
|++|+|++|++.+ .++. +..+++|++|+|++|+++...+ ..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999999876 3333 4789999999999999974332 125899999999999999889888887
Q ss_pred CCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 240 DQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|++++|+|+.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6677664 7999999999999874 44 6788999999999999974
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-24 Score=215.55 Aligned_cols=198 Identities=22% Similarity=0.182 Sum_probs=125.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
..++.+++++++++...... ...++.|+|++|.+.+..+..|.++++|++|+|++|.+++. |. .+.+++|++|+
T Consensus 10 ~~l~~l~~~~~~l~~ip~~~----~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 83 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTALPPDL----PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTLD 83 (290)
T ss_dssp TTCCEEECTTSCCSSCCSCC----CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEEE
T ss_pred CCccEEECCCCCCCcCCCCC----CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEEE
Confidence 45667777777664221111 13555555555555555555555555555555555555432 22 24555555555
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p 233 (640)
|++|+|+ .+|..+.++++|++|+|++|+|++.++. |.++++|++|+|++| ++++..+
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N---------------------~l~~~~~ 141 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN---------------------ELKTLPP 141 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS---------------------CCCCCCT
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC---------------------CCCccCh
Confidence 5555555 4555555555555555555555555544 555555555555555 5555555
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCc
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+. +|..+....+|+.|+|++|.+.
T Consensus 142 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 142 GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred hhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 667788888888888888887666677888888888888888874 7777777888888888888875
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=213.89 Aligned_cols=159 Identities=21% Similarity=0.215 Sum_probs=114.1
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNL 202 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 202 (640)
++|+.|+|++|.+++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++.++. |..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 4677777777777777777777778888888888887776666677777888888888877777665 667777777777
Q ss_pred cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCc
Q 006570 203 GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282 (640)
Q Consensus 203 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 282 (640)
++|++++ ..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|++++..+.
T Consensus 115 ~~N~l~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 115 GGNQLKS---------------------LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CSSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCcCCC---------------------cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 7666643 3334456667777777777777766666677777777777777777766666
Q ss_pred cccCCCCCCEEeccCccCccc
Q 006570 283 NISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 283 ~~~~~~~L~~L~ls~N~l~~~ 303 (640)
.+..+++|+.|++++|++++.
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCTT
T ss_pred HHhCCCCCCEEEeeCCceeCC
Confidence 677777777777777777654
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-24 Score=211.58 Aligned_cols=199 Identities=12% Similarity=0.068 Sum_probs=115.6
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCc-CcCCCCccccCCCCCCEEEccc-CcccccCCccccCCCCCCEEE
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG-LWGPLPSKINRFWSLEVLNISS-NFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 178 (640)
.++.|+|++|.+.+..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |.+++..|..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55566666666555555556666666666666664 5444444556666666666665 666644445555666666666
Q ss_pred ccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccC-cccccCCccccCCCCcc-EEEccCCcccCcC
Q 006570 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNN-SLRSEIPSGLKNFDQLK-QFDISSNNFVGPI 256 (640)
Q Consensus 179 L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~ 256 (640)
+++|++++.+ .+..+++|+ .|+.|++++| ++++..+..|.++++|+ .|++++|+++ .+
T Consensus 112 l~~n~l~~lp-~~~~l~~L~------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i 171 (239)
T 2xwt_C 112 IFNTGLKMFP-DLTKVYSTD------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SV 171 (239)
T ss_dssp EEEECCCSCC-CCTTCCBCC------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EE
T ss_pred CCCCCCcccc-ccccccccc------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-cc
Confidence 6666665532 255555554 0114444555 55545555566777777 7777777776 33
Q ss_pred CccccCCCCCcEEEccCCc-CCccCCccccCC-CCCCEEeccCccCcccCCCCccCCCCCceeeeccc
Q 006570 257 QSFLFSLPSILYLNLAGNQ-LSEALPVNISCS-AKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 257 p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
|......++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++++.|+++++
T Consensus 172 ~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 172 QGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 3333333677777777774 766556666667 7777777777777643333 3455666666543
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.2e-24 Score=210.37 Aligned_cols=181 Identities=16% Similarity=0.141 Sum_probs=151.2
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCc-ccccCCccccCCCCCCEEEccC-ccCCccCCC-ccCcCcCCeeE
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF-IYGEIPMEITSLKNLKSIVLAD-NLLNGSVPD-LQRLVLLEELN 201 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~-~~~l~~L~~L~ 201 (640)
+|++|+|++|++++..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |++++.++. |.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78899999999977777788889999999999996 8766666788899999999988 888888775 78888888888
Q ss_pred ccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCcc---EEEccCC-cccCcCCccccCCCCCc-EEEccCCcC
Q 006570 202 LGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLK---QFDISSN-NFVGPIQSFLFSLPSIL-YLNLAGNQL 276 (640)
Q Consensus 202 L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l 276 (640)
|++|++++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ +|++++|++
T Consensus 112 l~~n~l~~----------------------lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM----------------------FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS----------------------CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc----------------------ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 87777643 444 66677777 9999999 99988888899999999 999999999
Q ss_pred CccCCccccCCCCCCEEeccCcc-CcccCCCCccCC-CCCceeeeccccccCccC
Q 006570 277 SEALPVNISCSAKLNFVEISHNL-LIGKLPSCIGSN-SLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 277 ~~~~p~~~~~~~~L~~L~ls~N~-l~~~~p~~~~~~-~~l~~l~l~~N~l~~~~~ 329 (640)
+...+..+.. ++|+.|++++|+ +++..+..|..+ ++|+.+++++|.+++.++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~ 222 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPS 222 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCC
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCCh
Confidence 8544444544 899999999995 998778889999 999999999999997654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=207.00 Aligned_cols=179 Identities=19% Similarity=0.122 Sum_probs=156.1
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEcc
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLG 203 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~ 203 (640)
+.+.++++++.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.|++.++. |.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3467888888884 5776665 6899999999999988888899999999999999999988876 7888888888887
Q ss_pred CCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcc
Q 006570 204 GNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283 (640)
Q Consensus 204 ~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 283 (640)
+|+++ +..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..
T Consensus 92 ~n~l~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 150 (251)
T 3m19_A 92 NNQLA---------------------SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA 150 (251)
T ss_dssp TSCCC---------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCccc---------------------ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHH
Confidence 77764 344566788999999999999999888888899999999999999999877778
Q ss_pred ccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 284 ISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 284 ~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
|..+++|+.|+|++|++++..|..+..+++|+.+++++|.+++.
T Consensus 151 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999999999999988888999999999999999999875
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=211.40 Aligned_cols=206 Identities=19% Similarity=0.096 Sum_probs=160.0
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|++++|.+++.. +..+...+.|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEEC-TTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccC-HhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 5899999999885433 223445689999999999998888889999999999999999998888889999999999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCcc-CCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCC
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGS-VPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p 233 (640)
++|.+.+..+..+.++++|++|+|++|.+++. +|. +.++++|++|+|++|++++..+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~-------------------- 167 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT-------------------- 167 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG--------------------
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH--------------------
Confidence 99999977777899999999999999999984 354 89999999999999988654433
Q ss_pred ccccCCCCcc----EEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccC
Q 006570 234 SGLKNFDQLK----QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 234 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~ 304 (640)
.+..+.+|+ .|++++|++++..+..+. ..+|++|+|++|++++..+..+..+++|+.|++++|++++..
T Consensus 168 -~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 168 -DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp -GGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred -HhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 333333333 677777777655444333 346777777777777655555667777777777777776543
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-24 Score=216.94 Aligned_cols=196 Identities=18% Similarity=0.241 Sum_probs=154.4
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCe
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEE 199 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~ 199 (640)
+..+++|+.|++++|.+.. +| .+..+++|++|+|++|.+++ +|. +.++++|++|+|++|++++. +.+..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~ 111 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-SAIAGLQSIKT 111 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCE
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-hhhcCCCCCCE
Confidence 4567788888888888854 55 57888888888888888884 444 88888888888888888875 46888888888
Q ss_pred eEccCCCCCCCCC-CcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 200 LNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 200 L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
|+|++|++++..+ ..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 112 L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 112 LDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp EECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred EECCCCCCCCchhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 8888888876543 126788888888888875443 7888889999999998886443 8888889999999998877
Q ss_pred cCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 279 ALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 279 ~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
..+ +..+++|+.|++++|++++..| +..+++|+.+++++|.+++.+
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 443 7788889999999998886553 788888999999998887643
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-24 Score=237.91 Aligned_cols=213 Identities=21% Similarity=0.278 Sum_probs=136.2
Q ss_pred CCCCCCCCCCCCCCCCCcccE-EeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcE
Q 006570 50 LQGWTDWTNFCYLPSSSSLKI-VCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKV 128 (640)
Q Consensus 50 l~~W~~~~~~C~~~~~~~~gv-~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~ 128 (640)
+.+|..+.++|.-....|.++ .|..++++.|+|++|++++ + |..+ +++|++
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-l-------------------------p~~l--~~~L~~ 84 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-L-------------------------PDNL--PPQITV 84 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-C-------------------------CSCC--CTTCSE
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-c-------------------------CHhH--cCCCCE
Confidence 446766678884211123478 7876788888888887743 2 2212 245666
Q ss_pred eecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCC
Q 006570 129 LSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208 (640)
Q Consensus 129 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~ 208 (640)
|+|++|.|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|++|+|+++++ .+++|++|+|++|+|+
T Consensus 85 L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~ 153 (571)
T 3cvr_A 85 LEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE---LPALLEYINADNNQLT 153 (571)
T ss_dssp EECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCS
T ss_pred EECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC---cCccccEEeCCCCccC
Confidence 777777664 455 345667777777777764 555 544 67777777777766433 5667777777777776
Q ss_pred CCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCC-------cEEEccCCcCCccCC
Q 006570 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSI-------LYLNLAGNQLSEALP 281 (640)
Q Consensus 209 ~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~p 281 (640)
+ +|..+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+. +|
T Consensus 154 ~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp 223 (571)
T 3cvr_A 154 M-LPELPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IP 223 (571)
T ss_dssp C-CCCCCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CC
T ss_pred c-CCCcCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cC
Confidence 5 44456677777777777765 555 54 67777777777777 4555 443 55 777777777764 66
Q ss_pred ccccCCCCCCEEeccCccCcccCCCCccCC
Q 006570 282 VNISCSAKLNFVEISHNLLIGKLPSCIGSN 311 (640)
Q Consensus 282 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~ 311 (640)
..+..+++|+.|+|++|+|++.+|..+..+
T Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 224 ENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp GGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 666667777777777777777776665543
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-25 Score=235.58 Aligned_cols=229 Identities=19% Similarity=0.158 Sum_probs=191.5
Q ss_pred ccccccccCccCCCChhh----hhhcCCCCCcEeecccC---cCcCCCCccc-------cCCCCCCEEEcccCcccc---
Q 006570 100 FSASQQSLSANFNIDRFF----TILTKLSNLKVLSLVSL---GLWGPLPSKI-------NRFWSLEVLNISSNFIYG--- 162 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~----~~l~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~~--- 162 (640)
+.++.|+|++|.+.+..+ ..|..+++|++|+|++| .+++.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 578888999988877644 44779999999999996 5556677655 789999999999999997
Q ss_pred -cCCccccCCCCCCEEEccCccCCccCCC-----ccCc---------CcCCeeEccCCCCC-CCCCC------cccccce
Q 006570 163 -EIPMEITSLKNLKSIVLADNLLNGSVPD-----LQRL---------VLLEELNLGGNDFG-PKFPS------LSKNIVS 220 (640)
Q Consensus 163 -~~p~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~l---------~~L~~L~L~~N~l~-~~~~~------~~~~L~~ 220 (640)
.+|..+..+++|++|+|++|.++...+. +..+ ++|++|+|++|+++ +.++. .+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 5888899999999999999999755442 3444 89999999999998 44442 2579999
Q ss_pred eecccCccc--c---cCCccccCCCCccEEEccCCccc----CcCCccccCCCCCcEEEccCCcCCcc----CCcccc--
Q 006570 221 VILRNNSLR--S---EIPSGLKNFDQLKQFDISSNNFV----GPIQSFLFSLPSILYLNLAGNQLSEA----LPVNIS-- 285 (640)
Q Consensus 221 L~l~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~-- 285 (640)
|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. +|..+.
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 271 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhc
Confidence 999999998 3 45558899999999999999996 67888899999999999999999875 566663
Q ss_pred CCCCCCEEeccCccCcc----cCCCCc-cCCCCCceeeeccccccCcc
Q 006570 286 CSAKLNFVEISHNLLIG----KLPSCI-GSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~----~~p~~~-~~~~~l~~l~l~~N~l~~~~ 328 (640)
.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|.+++..
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 48999999999999998 488777 66899999999999998743
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-23 Score=210.63 Aligned_cols=189 Identities=20% Similarity=0.245 Sum_probs=156.0
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.|++++|.+.. ++ .+..+++|++|+|++|.+++ +|. +..+++|++|+|++|.+++ +| .+..+++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECC
Confidence 45555555555443 23 57889999999999999965 444 8999999999999999985 44 68889999999999
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCC-cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF 259 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 259 (640)
+|++++.+ .+..+++|++|+|++|++++..+- .+++|+.|++++|++++. +. +.++++|+.|+|++|++++..+
T Consensus 116 ~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-- 190 (308)
T 1h6u_A 116 STQITDVT-PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP-- 190 (308)
T ss_dssp TSCCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--
T ss_pred CCCCCCch-hhcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--
Confidence 99998864 488999999999999999876542 268899999999999864 43 8999999999999999997544
Q ss_pred ccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 260 LFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 260 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
+..+++|++|+|++|++++..| +..+++|+.|++++|++++
T Consensus 191 l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 8899999999999999987553 8899999999999999985
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-24 Score=229.06 Aligned_cols=246 Identities=18% Similarity=0.121 Sum_probs=180.6
Q ss_pred EEecCCCCCCCCCCCCcCCC-ccccccccCccCCCChhh----hhhcCCC-CCcEeecccCcCcCCCCccccCC-----C
Q 006570 80 LTVIGNKSSPAHSPKPTFGK-FSASQQSLSANFNIDRFF----TILTKLS-NLKVLSLVSLGLWGPLPSKINRF-----W 148 (640)
Q Consensus 80 l~l~~~~~~~~~~~~~~~~~-~~l~~l~l~~n~~~~~~~----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~ 148 (640)
.+++.+++++.++. +... ..++.|+|++|.+.+..+ ..|.+++ +|++|+|++|.+++..+..+..+ +
T Consensus 3 ~~ls~n~~~~~~~~--~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 3 YKLTLHPGSNPVEE--FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EECCCCTTCCHHHH--HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred cccccccchHHHHH--HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 45666666554321 1222 358888999888877666 6788888 89999999999987777777665 8
Q ss_pred CCCEEEcccCcccccCCcccc----CC-CCCCEEEccCccCCccCCC-----ccC-cCcCCeeEccCCCCCCCCCCc---
Q 006570 149 SLEVLNISSNFIYGEIPMEIT----SL-KNLKSIVLADNLLNGSVPD-----LQR-LVLLEELNLGGNDFGPKFPSL--- 214 (640)
Q Consensus 149 ~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~~~-----~~~-l~~L~~L~L~~N~l~~~~~~~--- 214 (640)
+|++|+|++|.+++..+..+. .+ ++|++|+|++|+|++..+. +.. .++|++|+|++|+++...+..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 899999999999876666443 44 8899999999998877663 333 358999999999887544322
Q ss_pred ----c-cccceeecccCcccccCCcccc----CC-CCccEEEccCCcccCc----CCccccC-CCCCcEEEccCCcCCcc
Q 006570 215 ----S-KNIVSVILRNNSLRSEIPSGLK----NF-DQLKQFDISSNNFVGP----IQSFLFS-LPSILYLNLAGNQLSEA 279 (640)
Q Consensus 215 ----~-~~L~~L~l~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~l~~N~l~~~ 279 (640)
. ++|++|+|++|++++..+..+. .+ ++|+.|||++|+|++. ++..+.. .++|++|+|++|++++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 2 4899999999999877665444 44 5899999999998863 4455555 35899999999998764
Q ss_pred CC----ccccCCCCCCEEeccCccCccc-------CCCCccCCCCCceeeeccccccCc
Q 006570 280 LP----VNISCSAKLNFVEISHNLLIGK-------LPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 280 ~p----~~~~~~~~L~~L~ls~N~l~~~-------~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.+ ..+..+++|+.|++++|.+.+. ++..+..++.|+.+++++|.+...
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 43 3456778899999999985533 334677788888999999987764
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-25 Score=228.45 Aligned_cols=253 Identities=14% Similarity=0.102 Sum_probs=197.4
Q ss_pred ccEEeCCCcEEEEEecCCCCCCCCCCCCcCCC--ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCC-CCccc
Q 006570 68 LKIVCTNSRVTELTVIGNKSSPAHSPKPTFGK--FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGP-LPSKI 144 (640)
Q Consensus 68 ~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~--~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~-~p~~~ 144 (640)
.++.|+...++.++++++.+.+.. .... ..++.+++++|.+.+..+. +..+++|++|+|++|.+++. +|..+
T Consensus 40 ~~~~~~~~~~~~l~l~~~~~~~~~----~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~ 114 (336)
T 2ast_B 40 YRLASDESLWQTLDLTGKNLHPDV----TGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGIL 114 (336)
T ss_dssp HHHHTCSTTSSEEECTTCBCCHHH----HHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHH
T ss_pred HHHhcCchhheeeccccccCCHHH----HHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHH
Confidence 367776666888999988763110 1111 5788899999988777665 66799999999999998766 88888
Q ss_pred cCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc-cCCcc-CCC-ccCcCcCCeeEccCC-CCCCC-CCCc---cc
Q 006570 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN-LLNGS-VPD-LQRLVLLEELNLGGN-DFGPK-FPSL---SK 216 (640)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~-~~~l~~L~~L~L~~N-~l~~~-~~~~---~~ 216 (640)
..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++. +.++++|++|+|++| .+++. ++.. ++
T Consensus 115 ~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~ 194 (336)
T 2ast_B 115 SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVS 194 (336)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSC
T ss_pred hhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcc
Confidence 99999999999999999888889999999999999999 68753 444 788999999999999 88754 3332 67
Q ss_pred -ccceeecccC--ccc-ccCCccccCCCCccEEEccCCc-ccCcCCccccCCCCCcEEEccCCc-CCccCCccccCCCCC
Q 006570 217 -NIVSVILRNN--SLR-SEIPSGLKNFDQLKQFDISSNN-FVGPIQSFLFSLPSILYLNLAGNQ-LSEALPVNISCSAKL 290 (640)
Q Consensus 217 -~L~~L~l~~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L 290 (640)
+|++|++++| .++ +.+|..+.++++|+.|+|++|. +++..+..+..+++|++|++++|. ++......+..+++|
T Consensus 195 ~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L 274 (336)
T 2ast_B 195 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL 274 (336)
T ss_dssp TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred cCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCC
Confidence 9999999999 555 5677778889999999999999 777778889999999999999995 322222257889999
Q ss_pred CEEeccCccCcccCCCCccCC-CCCceeeeccccccCccC
Q 006570 291 NFVEISHNLLIGKLPSCIGSN-SLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 291 ~~L~ls~N~l~~~~p~~~~~~-~~l~~l~l~~N~l~~~~~ 329 (640)
+.|++++| ++ ...+..+ ..+..|++++|.+++..|
T Consensus 275 ~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 275 KTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp CEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred CEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccC
Confidence 99999998 33 2233333 246777889999998765
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=221.61 Aligned_cols=181 Identities=23% Similarity=0.264 Sum_probs=158.1
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccC
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGG 204 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~ 204 (640)
+|+.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|+|+++++ +.+ +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEECCC
Confidence 89999999999976 887663 89999999999999 788 457999999999999999655 665 999999999
Q ss_pred CCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc
Q 006570 205 NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (640)
Q Consensus 205 N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 284 (640)
|+|++..+ .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +
T Consensus 130 N~l~~lp~-~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~ 198 (571)
T 3cvr_A 130 NQLTMLPE-LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-V 198 (571)
T ss_dssp SCCSCCCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-C
T ss_pred CcCCCCCC-cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-H
Confidence 99998444 88999999999999996 666 57899999999999997 666 65 89999999999998 4776 6
Q ss_pred cCCCCC-------CEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 285 SCSAKL-------NFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 285 ~~~~~L-------~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
.. +| +.|+|++|+|+ .+|..+..+++|+.|++++|++++..|
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp C----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred HH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 54 77 99999999999 588888889999999999999998654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=194.96 Aligned_cols=162 Identities=19% Similarity=0.181 Sum_probs=115.2
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNL 202 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 202 (640)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++.++. |.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 4677788888888765566677788888888888888755555577788888888888888777666 677777777777
Q ss_pred cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCc
Q 006570 203 GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282 (640)
Q Consensus 203 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 282 (640)
++|++++ ..+..|.++++|+.|+|++|++++..+..+..+++|++|+|++|.+.+
T Consensus 108 ~~N~l~~---------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 108 NTNQLQS---------------------LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CSSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred CCCcCcc---------------------cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 7766643 333445667777777777777776666566777777777777776654
Q ss_pred cccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 283 ~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
.+++|+.|+++.|+++|.+|..++.+..
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456777777777777777777766543
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-22 Score=207.88 Aligned_cols=219 Identities=12% Similarity=0.072 Sum_probs=173.6
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCC-ccccCCCCCCE-EEcccCcccccCCccccCCCCCCEE
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP-SKINRFWSLEV-LNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
.+++.|+|++|.+....+.+|.++++|++|+|++|.+.+.+| ..|.++++|++ ++++.|+|+...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999987767789999999999999999977776 46889998875 6777899997778889999999999
Q ss_pred EccCccCCccCCC-ccCcCcCCeeEccC-CCCCCCCCCc----ccccceeecccCcccccCCccccCCCCccEEEccC-C
Q 006570 178 VLADNLLNGSVPD-LQRLVLLEELNLGG-NDFGPKFPSL----SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISS-N 250 (640)
Q Consensus 178 ~L~~N~l~~~~~~-~~~l~~L~~L~L~~-N~l~~~~~~~----~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~-N 250 (640)
++++|+|++.++. +....++..|++.+ |++....+.. ...++.|+|++|+|+. +|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCC
Confidence 9999999988876 67778889999976 5665444433 3568889999999985 555555667899999985 6
Q ss_pred cccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc
Q 006570 251 NFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 251 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~ 323 (640)
.++...+..|..+++|++|||++|+|+...+..+ .+|+.|.+.++.--..+|. +..+++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 6765555678999999999999999987544444 5566666655543446774 7788899999887654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-22 Score=191.50 Aligned_cols=173 Identities=20% Similarity=0.158 Sum_probs=139.9
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N 205 (640)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++.++. |..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 35666677763 456444 45788888888888866666678888888888888888877766 677777777777776
Q ss_pred CCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 206 ~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
+++ +..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+.
T Consensus 87 ~l~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 145 (208)
T 2o6s_A 87 QLQ---------------------SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD 145 (208)
T ss_dssp CCC---------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cCC---------------------ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhc
Confidence 653 34455678899999999999999988888899999999999999999987777789
Q ss_pred CCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccCC
Q 006570 286 CSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~~ 330 (640)
.+++|+.|++++|.+.+. ++.++.++++.|.++|..|.
T Consensus 146 ~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 146 RLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp TCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBC
T ss_pred cCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeec
Confidence 999999999999988764 45689999999999998763
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-23 Score=219.36 Aligned_cols=224 Identities=22% Similarity=0.204 Sum_probs=185.6
Q ss_pred cccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCC----ccccCCC-CCCEEEcccCcccccCCccccCC-----CCC
Q 006570 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP----SKINRFW-SLEVLNISSNFIYGEIPMEITSL-----KNL 174 (640)
Q Consensus 105 l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 174 (640)
.+|+.|.+.+.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5678899999999988888889999999999977666 7788999 99999999999998878777775 999
Q ss_pred CEEEccCccCCccCCC-----ccCc-CcCCeeEccCCCCCCCCCCc--------ccccceeecccCcccccC----Cccc
Q 006570 175 KSIVLADNLLNGSVPD-----LQRL-VLLEELNLGGNDFGPKFPSL--------SKNIVSVILRNNSLRSEI----PSGL 236 (640)
Q Consensus 175 ~~L~L~~N~l~~~~~~-----~~~l-~~L~~L~L~~N~l~~~~~~~--------~~~L~~L~l~~N~l~~~~----p~~~ 236 (640)
++|+|++|.+++..+. +..+ ++|++|+|++|++++..+.. .++|++|+|++|+++... +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 9999999999987775 4455 89999999999998776543 259999999999998543 3445
Q ss_pred cCCC-CccEEEccCCcccCcCCcccc----CC-CCCcEEEccCCcCCcc----CCccccC-CCCCCEEeccCccCcccCC
Q 006570 237 KNFD-QLKQFDISSNNFVGPIQSFLF----SL-PSILYLNLAGNQLSEA----LPVNISC-SAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 237 ~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~l~~N~l~~~----~p~~~~~-~~~L~~L~ls~N~l~~~~p 305 (640)
..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|+|++. ++..+.. .++|+.|||++|++++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 5665 999999999999987776554 44 6999999999999763 4555555 4699999999999987654
Q ss_pred ----CCccCCCCCceeeeccccccCcc
Q 006570 306 ----SCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 306 ----~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
..+..++.|+.|++++|.+++..
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~ 269 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMS 269 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCC
T ss_pred HHHHHHHhcCCCccEEEeccCCccccC
Confidence 34567789999999999976543
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-23 Score=237.04 Aligned_cols=262 Identities=16% Similarity=0.122 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHhCCCC--CCCCCCCCC-CCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccc
Q 006570 30 TPSETRILFQVQKLLEYP--EVLQGWTDW-TNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQS 106 (640)
Q Consensus 30 ~~~~~~~l~~~k~~~~~~--~~l~~W~~~-~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~ 106 (640)
...+.++|+++......+ ..-..|... +..+.|. ++.++..+++.|+|.++.+.... ...++.++
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~~-------~~~l~~l~ 197 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTAT-----NSAVSTPLTPKIELFANGKDEAN-------QALLQHKK 197 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCC-----CceecCCccceEEeeCCCCCcch-------hhHhhcCc
Confidence 346778899988766322 123356433 3445565 68888889999999988774321 12345555
Q ss_pred cCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCc
Q 006570 107 LSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG 186 (640)
Q Consensus 107 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 186 (640)
|+.|.+.+ ++++.|.+. ..|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+.
T Consensus 198 Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~ 261 (727)
T 4b8c_D 198 LSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTE 261 (727)
T ss_dssp ---------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSC
T ss_pred cCcccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcc
Confidence 66554422 233333332 33444445555555555555554 444444445555555555555553
Q ss_pred cCCCccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCC
Q 006570 187 SVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263 (640)
Q Consensus 187 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 263 (640)
+++.|.+|++|++|+|++|+|+ .+|.. +++|+.|+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|..+..+
T Consensus 262 lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 262 LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp CCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred cChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 3333455555555555555554 22322 345555555555554 678888999999999999999998888887654
Q ss_pred CC-CcEEEccCCcCCccCCccccCCCCCCEEeccCc--------cCcccCCCCccCCCCCceeeeccccccCc
Q 006570 264 PS-ILYLNLAGNQLSEALPVNISCSAKLNFVEISHN--------LLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 264 ~~-L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N--------~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.. +..|+|++|.+++.+|.. |+.|++++| .|.+..+..+.++..+....+++|.+++.
T Consensus 340 ~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 340 SVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp HHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCCGG
T ss_pred chhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 32 234789999998887764 456667766 44444445556666777788888888754
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-22 Score=204.73 Aligned_cols=144 Identities=14% Similarity=0.122 Sum_probs=114.5
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC------------------ChHHHHHHHHHHhcCCC
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH------------------LPQSLMQHVELLSKLRH 506 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~h 506 (640)
.+......|...+.||+|+||.||+|+..+|+.||||.++..... ....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 344445556677999999999999999977999999999643211 2356899999999998
Q ss_pred cccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 507 ~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
| +++.+++. ....++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+|||
T Consensus 163 -~-~~v~~~~~---------~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrD 218 (282)
T 1zar_A 163 -G-LAVPKVYA---------WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGD 218 (282)
T ss_dssp -T-SSSCCEEE---------EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred -C-CCcCeEEe---------ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCC
Confidence 4 66666442 123599999999999988 521 1245799999999999998 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCC
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
|||+|||++ ++.+||+|||+++.....
T Consensus 219 lkp~NILl~-~~~vkl~DFG~a~~~~~~ 245 (282)
T 1zar_A 219 LSQYNVLVS-EEGIWIIDFPQSVEVGEE 245 (282)
T ss_dssp CSTTSEEEE-TTEEEECCCTTCEETTST
T ss_pred CCHHHEEEE-CCcEEEEECCCCeECCCC
Confidence 999999999 999999999999876544
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-21 Score=211.86 Aligned_cols=198 Identities=20% Similarity=0.222 Sum_probs=129.8
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.|++++|.+. .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 5788999999886 6676665 89999999999996 5776 5799999999999999 6776 67999999999
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCcccc-----------------CCCCcc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLK-----------------NFDQLK 243 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~-----------------~l~~L~ 243 (640)
+|.|++.++ .+++|+.|+|++|+++. +|..+++|+.|+|++|++++ +|..+. .+++|+
T Consensus 110 ~N~l~~l~~---~l~~L~~L~L~~N~l~~-lp~~l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~ 184 (622)
T 3g06_A 110 SNPLTHLPA---LPSGLCKLWIFGNQLTS-LPVLPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQ 184 (622)
T ss_dssp SCCCCCCCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCC
T ss_pred CCcCCCCCC---CCCCcCEEECCCCCCCc-CCCCCCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCc
Confidence 999998765 45667777777777665 34445666666666666664 232222 126667
Q ss_pred EEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc
Q 006570 244 QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 244 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~ 323 (640)
.|+|++|+|++ +|.. +++|+.|++++|+++. +|. .+++|+.|++++|+|++ +| ..+++|+.|++++|.
T Consensus 185 ~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~ 252 (622)
T 3g06_A 185 ELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNR 252 (622)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCC
Confidence 77777777764 3322 2344444444444432 222 12455555555555553 33 233445555555555
Q ss_pred ccC
Q 006570 324 LSG 326 (640)
Q Consensus 324 l~~ 326 (640)
++.
T Consensus 253 L~~ 255 (622)
T 3g06_A 253 LTS 255 (622)
T ss_dssp CSC
T ss_pred CCc
Confidence 554
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-22 Score=211.07 Aligned_cols=218 Identities=14% Similarity=0.145 Sum_probs=185.9
Q ss_pred cccccccCccCCCChhhhhhcCC--CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCccccc-CCccccCCCCCCEE
Q 006570 101 SASQQSLSANFNIDRFFTILTKL--SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGE-IPMEITSLKNLKSI 177 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 177 (640)
..+.+++++|.+. +..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4678899988775 5667777 8999999999999887665 67899999999999999876 88889999999999
Q ss_pred EccCccCCccCCC-ccCcCcCCeeEccCC-CCCCC-CCCc---ccccceeecccC-ccccc-CCccccCCC-CccEEEcc
Q 006570 178 VLADNLLNGSVPD-LQRLVLLEELNLGGN-DFGPK-FPSL---SKNIVSVILRNN-SLRSE-IPSGLKNFD-QLKQFDIS 248 (640)
Q Consensus 178 ~L~~N~l~~~~~~-~~~l~~L~~L~L~~N-~l~~~-~~~~---~~~L~~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~Ls 248 (640)
+|++|.+++..+. +..+++|++|+|++| .+++. ++.. +++|++|++++| .+++. ++..+..++ +|++|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 9999999977665 888999999999999 67753 4442 789999999999 99865 677788999 99999999
Q ss_pred CC--ccc-CcCCccccCCCCCcEEEccCCc-CCccCCccccCCCCCCEEeccCcc-CcccCCCCccCCCCCceeeeccc
Q 006570 249 SN--NFV-GPIQSFLFSLPSILYLNLAGNQ-LSEALPVNISCSAKLNFVEISHNL-LIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 249 ~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~L~ls~N~-l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
+| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 99 555 4667788899999999999999 777788889999999999999995 32222225788999999999988
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-23 Score=221.62 Aligned_cols=231 Identities=20% Similarity=0.230 Sum_probs=186.1
Q ss_pred CcEEEEEecCCCCCCCCCC---CCcCCCccccccccCcc---CCCChhhhh-------hcCCCCCcEeecccCcCcC---
Q 006570 75 SRVTELTVIGNKSSPAHSP---KPTFGKFSASQQSLSAN---FNIDRFFTI-------LTKLSNLKVLSLVSLGLWG--- 138 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~---~~~~~~~~l~~l~l~~n---~~~~~~~~~-------l~~l~~L~~L~L~~n~l~~--- 138 (640)
.+++.|+|++|.++..... ......+.|+.|+|++| .+.+.+|.. |..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 4689999999977432110 00123478999999986 444555654 4899999999999999987
Q ss_pred -CCCccccCCCCCCEEEcccCcccccCCcccc----CC---------CCCCEEEccCccCC-ccCC----CccCcCcCCe
Q 006570 139 -PLPSKINRFWSLEVLNISSNFIYGEIPMEIT----SL---------KNLKSIVLADNLLN-GSVP----DLQRLVLLEE 199 (640)
Q Consensus 139 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~~----~~~~l~~L~~ 199 (640)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.++ .+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4788899999999999999999855444443 34 89999999999998 4444 3778899999
Q ss_pred eEccCCCCCC-----CCC-C--cccccceeecccCccc----ccCCccccCCCCccEEEccCCcccCc----CCccc--c
Q 006570 200 LNLGGNDFGP-----KFP-S--LSKNIVSVILRNNSLR----SEIPSGLKNFDQLKQFDISSNNFVGP----IQSFL--F 261 (640)
Q Consensus 200 L~L~~N~l~~-----~~~-~--~~~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~ 261 (640)
|+|++|+++. ..| . .+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++. +|..+ +
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 271 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhc
Confidence 9999999972 233 2 3689999999999996 67888999999999999999999876 56666 3
Q ss_pred CCCCCcEEEccCCcCCc----cCCccc-cCCCCCCEEeccCccCcccCC
Q 006570 262 SLPSILYLNLAGNQLSE----ALPVNI-SCSAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 262 ~l~~L~~L~l~~N~l~~----~~p~~~-~~~~~L~~L~ls~N~l~~~~p 305 (640)
.+++|+.|+|++|++++ .+|..+ .++++|+.|++++|++++..|
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 49999999999999988 478777 668999999999999997654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.2e-22 Score=218.81 Aligned_cols=159 Identities=16% Similarity=0.154 Sum_probs=119.0
Q ss_pred CCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 454 DPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
...+.||+|+||.||+|+. .+..+++|+....... ..+++.+|++++++++||||+++..++..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 410 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------- 410 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------
Confidence 3467899999999999965 4788999987543211 13458999999999999999966655542
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++||||+++|+|.++++. +..++.|+++||+|||+ .+|+||||||+|||+++ .+||+||
T Consensus 411 -~~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DF 473 (540)
T 3en9_A 411 -LDNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDF 473 (540)
T ss_dssp -TTTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCC
T ss_pred -CCccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEEC
Confidence 2235999999999999999953 56899999999999998 79999999999999998 9999999
Q ss_pred CCCccccCCCC----------c--------------c--CC-CCccceehhhHHHHHHh
Q 006570 606 NIPLPSKVRNT----------L--------------S--FH-TDRSSLYKIILIICVIT 637 (640)
Q Consensus 606 Gla~~~~~~~~----------~--------------~--~~-~~~~DvwS~Gvvl~ell 637 (640)
|+++....... . . .. +..+|+||..+-.+|-+
T Consensus 474 Gla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v 532 (540)
T 3en9_A 474 GLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDV 532 (540)
T ss_dssp TTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred ccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99987754211 0 1 12 66789999888777654
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=215.97 Aligned_cols=194 Identities=19% Similarity=0.236 Sum_probs=158.2
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.+..++|..+.+.+..+ +..|++|+.|+|++|.+.. +| .+..+++|+.|+|++|.|++..| +..|++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 44455666666554433 5678889999999999854 55 58899999999999999996554 8899999999999
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 258 (640)
+|.|++. |.+..+++|++|+|++|++++. +.. +++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|
T Consensus 96 ~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 96 ENKIKDL-SSLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp SSCCCCC-TTSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCCCC-hhhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 9999874 5788999999999999999874 333 78899999999999865 678899999999999999997766
Q ss_pred cccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCc
Q 006570 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI 308 (640)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~ 308 (640)
+..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.....+
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~ 217 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQ 217 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCCCCC
T ss_pred -hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCccccc
Confidence 88999999999999999874 4 58889999999999999986544333
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-21 Score=196.83 Aligned_cols=185 Identities=19% Similarity=0.265 Sum_probs=127.1
Q ss_pred ccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCcc
Q 006570 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183 (640)
Q Consensus 104 ~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 183 (640)
.+.+..+.+.+.. .+..+++|+.|++++|.+.. +| .+..+++|++|+|++|++++..| +.++++|++|+|++|+
T Consensus 28 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 3444544443322 24567888889999888854 44 48888899999999998885444 8888899999999998
Q ss_pred CCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcccc
Q 006570 184 LNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261 (640)
Q Consensus 184 l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 261 (640)
+++. |.+..+++|++|+|++|++++. +.. +++|+.|++++|++++. ..+..+++|+.|+|++|++++..| +.
T Consensus 102 l~~~-~~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~ 175 (291)
T 1h6t_A 102 VKDL-SSLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LA 175 (291)
T ss_dssp CCCG-GGGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CCCC-hhhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hc
Confidence 8874 4588888888888888888663 322 56666666666666643 456666666666666666665443 66
Q ss_pred CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 262 ~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
.+++|+.|+|++|++++ +|. +..+++|+.|++++|+++.
T Consensus 176 ~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 176 GLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp TCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEEC
T ss_pred CCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcccC
Confidence 66666666666666655 332 6666666666666666654
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=185.04 Aligned_cols=133 Identities=23% Similarity=0.255 Sum_probs=82.0
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNL 202 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 202 (640)
++|++|+|++|.+++..|..|..+++|++|+|++|+|+...+..|.++++|++|+|++|+|++.++. |..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 5667777777777766677777777777777777777644444566677777777777776666555 455555555555
Q ss_pred cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 203 GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 203 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.++.
T Consensus 120 s~N~l~----------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT----------------------ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC----------------------SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc----------------------ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 555542 344445555556666666666655444455555555555555555543
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=197.84 Aligned_cols=193 Identities=18% Similarity=0.096 Sum_probs=155.6
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCc-cccCCCCCCE-EEccCccCCccCCC-ccCcCcCCee
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKS-IVLADNLLNGSVPD-LQRLVLLEEL 200 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~L~~N~l~~~~~~-~~~l~~L~~L 200 (640)
++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|+. +.++.|+|+.++|+ |..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5799999999999765556899999999999999999877775 5889998875 67788999999887 8999999999
Q ss_pred EccCCCCCCCCCCc---ccccceeeccc-CcccccCCccccCCC-CccEEEccCCcccCcCCccccCCCCCcEEEccC-C
Q 006570 201 NLGGNDFGPKFPSL---SKNIVSVILRN-NSLRSEIPSGLKNFD-QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG-N 274 (640)
Q Consensus 201 ~L~~N~l~~~~~~~---~~~L~~L~l~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N 274 (640)
++++|++....+.. ..++..|++.+ |++....+..|..+. .++.|+|++|+|+. +|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCC
Confidence 99999998766654 34667788855 678766667787775 68999999999995 454555667899999985 6
Q ss_pred cCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCcee
Q 006570 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTV 317 (640)
Q Consensus 275 ~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l 317 (640)
+++...+..|..+++|+.||+++|+|+...+..+.++..|+.+
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l 231 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR 231 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECT
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhc
Confidence 7766555678999999999999999996655556655544443
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=191.83 Aligned_cols=193 Identities=20% Similarity=0.188 Sum_probs=164.9
Q ss_pred CCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEc
Q 006570 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202 (640)
Q Consensus 123 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L 202 (640)
+..+..+++..+.+++..+ +..+++|++|++++|.+. .+| .+..+++|++|+|++|++++.++ +..+++|++|+|
T Consensus 23 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l 97 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred HHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEEC
Confidence 3345556677777755433 567899999999999998 455 48899999999999999999877 999999999999
Q ss_pred cCCCCCCCCC-CcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCC
Q 006570 203 GGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281 (640)
Q Consensus 203 ~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 281 (640)
++|++++..+ ..+++|+.|++++|++++. +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 98 ~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 98 DENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 9999987432 1278999999999999864 5789999999999999999975 578999999999999999988655
Q ss_pred ccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 282 VNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 282 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
+..+++|+.|++++|++++ +| .+..+++|+.|++++|.++..+
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred --hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCCc
Confidence 8999999999999999986 45 4889999999999999988643
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-23 Score=223.74 Aligned_cols=252 Identities=18% Similarity=0.114 Sum_probs=179.1
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCC----hhhhhhcCCCCCcEeecccCcCcCCCCccc-cCCC--
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNID----RFFTILTKLSNLKVLSLVSLGLWGPLPSKI-NRFW-- 148 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~----~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~-- 148 (640)
+++.|+|+++.++.......+...+.++.|+|++|.+.+ .++..+..+++|++|+|++|.+....+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 577888888876422100001123578888888888764 456778888889999998888865444333 3344
Q ss_pred --CCCEEEcccCcccc----cCCccccCCCCCCEEEccCccCCccCCC------ccCcCcCCeeEccCCCCCCCCC----
Q 006570 149 --SLEVLNISSNFIYG----EIPMEITSLKNLKSIVLADNLLNGSVPD------LQRLVLLEELNLGGNDFGPKFP---- 212 (640)
Q Consensus 149 --~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~------~~~l~~L~~L~L~~N~l~~~~~---- 212 (640)
+|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+. ....++|++|+|++|++++...
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 68899999888883 5688888888899999988888754332 2235678888888888876432
Q ss_pred Cc---ccccceeecccCcccccCCcccc-----CCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCccC
Q 006570 213 SL---SKNIVSVILRNNSLRSEIPSGLK-----NFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEAL 280 (640)
Q Consensus 213 ~~---~~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~ 280 (640)
.. +++|++|++++|.++...+..+. .+++|+.|+|++|++++. ++..+..+++|++|+|++|++++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 22 47888888888888765444443 256888888888888763 4667778888888888888886532
Q ss_pred -----CccccCCCCCCEEeccCccCccc----CCCCccCCCCCceeeeccccccCc
Q 006570 281 -----PVNISCSAKLNFVEISHNLLIGK----LPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 281 -----p~~~~~~~~L~~L~ls~N~l~~~----~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+..+++|+.|++++|+++.. +|..+..+++|+.|++++|.++..
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 23334578888888888888764 566677788888888888887643
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=196.85 Aligned_cols=152 Identities=21% Similarity=0.222 Sum_probs=84.5
Q ss_pred CCEEEcccCcccccCCcccc-CCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecc
Q 006570 150 LEVLNISSNFIYGEIPMEIT-SLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILR 224 (640)
Q Consensus 150 L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~ 224 (640)
|+.|+|++|+|++..+..+. ++++|++|+|++|+|++.++. |.++++|++|+|++|+|+...+.. +++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44555555555544444444 455555555555555544443 445555555555555444332221 2344444444
Q ss_pred cCcccccCCccccCCCCccEEEccCCcccCcCCccc---cCCCCCcEEEccCCcCCccCCccccCCCC--CCEEeccCcc
Q 006570 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL---FSLPSILYLNLAGNQLSEALPVNISCSAK--LNFVEISHNL 299 (640)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~~p~~~~~~~~--L~~L~ls~N~ 299 (640)
+|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|.
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 445555556677777777777777777775444444 45777777777777777654455665655 3667777776
Q ss_pred Cc
Q 006570 300 LI 301 (640)
Q Consensus 300 l~ 301 (640)
+.
T Consensus 201 ~~ 202 (361)
T 2xot_A 201 LE 202 (361)
T ss_dssp EE
T ss_pred cc
Confidence 65
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=180.14 Aligned_cols=153 Identities=17% Similarity=0.160 Sum_probs=102.8
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCc-cccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
+.+++++|.++ .+|..+. ..+++|+|++|.|++..|. .|.++++|++|+|++|+|++.++. |.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47778877774 4666553 3457777777777765443 467777777777777777777664 67777776666666
Q ss_pred CCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc
Q 006570 205 NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (640)
Q Consensus 205 N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 284 (640)
|++++ ..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|
T Consensus 91 N~l~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 91 NRLEN---------------------VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp SCCCC---------------------CCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred CccCc---------------------cCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh
Confidence 65543 344456666677777777777776666666677777777777777766666666
Q ss_pred cCCCCCCEEeccCccCccc
Q 006570 285 SCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 285 ~~~~~L~~L~ls~N~l~~~ 303 (640)
..+++|+.|++++|.+.+.
T Consensus 150 ~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTCTTCCEEECCSCCEECS
T ss_pred cCCCCCCEEEecCcCCcCC
Confidence 6677777777777766543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-20 Score=177.71 Aligned_cols=150 Identities=21% Similarity=0.231 Sum_probs=95.7
Q ss_pred EeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCC
Q 006570 128 VLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND 206 (640)
Q Consensus 128 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~ 206 (640)
.+++++|+++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|. |.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4566666663 4565443 5677777777777765555677777777777777777776554 6667777666666666
Q ss_pred CCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccC
Q 006570 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISC 286 (640)
Q Consensus 207 l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 286 (640)
|+. ..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 92 l~~---------------------l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 92 ITE---------------------LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp CCC---------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCc---------------------cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 542 22233455666666666666666666666666666666666666666655555666
Q ss_pred CCCCCEEeccCccCc
Q 006570 287 SAKLNFVEISHNLLI 301 (640)
Q Consensus 287 ~~~L~~L~ls~N~l~ 301 (640)
+++|+.|++++|.+.
T Consensus 151 l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred CCCCCEEEeCCCCcC
Confidence 666666666666654
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-20 Score=205.76 Aligned_cols=168 Identities=23% Similarity=0.231 Sum_probs=141.9
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..|+.|+|++|.+... + .+..|++|+.|+|++|.+++..| +..+++|+.|+|++|.|++ +| .+..|++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 4677778888777543 3 58889999999999999976544 8899999999999999984 44 7889999999999
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (640)
++|+|++. +.+..+++|+.|+|++|++++. +.. +++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. |
T Consensus 117 s~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~ 191 (605)
T 1m9s_A 117 EHNGISDI-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R 191 (605)
T ss_dssp TTSCCCCC-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G
T ss_pred cCCCCCCC-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h
Confidence 99999874 6688999999999999999876 433 7899999999999987666 88999999999999999864 4
Q ss_pred ccccCCCCCcEEEccCCcCCcc
Q 006570 258 SFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 258 ~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
.+..+++|+.|+|++|++++.
T Consensus 192 -~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 192 -ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GGTTCTTCSEEECCSEEEECC
T ss_pred -HHccCCCCCEEEccCCcCcCC
Confidence 588999999999999999774
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-22 Score=220.19 Aligned_cols=251 Identities=18% Similarity=0.109 Sum_probs=146.1
Q ss_pred cEEEEEecCCCCCCCC---CCCCcCCCccccccccCccCCCChhhhhh-----cCCCCCcEeecccCcCcCC----CCcc
Q 006570 76 RVTELTVIGNKSSPAH---SPKPTFGKFSASQQSLSANFNIDRFFTIL-----TKLSNLKVLSLVSLGLWGP----LPSK 143 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~---~~~~~~~~~~l~~l~l~~n~~~~~~~~~l-----~~l~~L~~L~L~~n~l~~~----~p~~ 143 (640)
+++.|+|++|.++..- .+......+.|+.|+|++|.+.+..+..+ ...++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 5778888887764210 00011233577777888777665444332 2355677777777777653 3455
Q ss_pred ccCCCCCCEEEcccCcccccCCcccc-----CCCCCCEEEccCccCCcc----CCC-ccCcCcCCeeEccCCCCCCCC--
Q 006570 144 INRFWSLEVLNISSNFIYGEIPMEIT-----SLKNLKSIVLADNLLNGS----VPD-LQRLVLLEELNLGGNDFGPKF-- 211 (640)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~~~-~~~l~~L~~L~L~~N~l~~~~-- 211 (640)
+..+++|++|+|++|.+.+..+..+. .+++|++|+|++|.+++. ++. +..+++|++|+|++|+++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 66667777777777777654443333 255777777777777653 222 556677777777777665321
Q ss_pred ---C---CcccccceeecccCccccc----CCccccCCCCccEEEccCCcccCcCCccccC-----CCCCcEEEccCCcC
Q 006570 212 ---P---SLSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-----LPSILYLNLAGNQL 276 (640)
Q Consensus 212 ---~---~~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l 276 (640)
+ ..+++|++|++++|+++.. ++..+.++++|+.|+|++|.+++..+..+.. .++|++|+|++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 1 1145667777777766643 4555566666777777777665443333332 24666666666666
Q ss_pred Ccc----CCccccCCCCCCEEeccCccCcccCCCCccC-----CCCCceeeeccccccC
Q 006570 277 SEA----LPVNISCSAKLNFVEISHNLLIGKLPSCIGS-----NSLNRTVVSTWNCLSG 326 (640)
Q Consensus 277 ~~~----~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~-----~~~l~~l~l~~N~l~~ 326 (640)
++. +|..+..+++|+.|++++|++++..+..+.. .+.|+.|++++|.+++
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 543 3444555566666666666665543333321 4556666666666653
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-20 Score=187.64 Aligned_cols=171 Identities=22% Similarity=0.286 Sum_probs=120.5
Q ss_pred CCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeE
Q 006570 122 KLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELN 201 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 201 (640)
++.++..+++++|.++. ++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|+|++.++ +.++++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEE
Confidence 34555666666666643 33 4666777777777777776 455 56667777777777777776665 67777777777
Q ss_pred ccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCC
Q 006570 202 LGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281 (640)
Q Consensus 202 L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 281 (640)
|++|++++..+...++|+.|+|++|++++ + +.+.++++|+.|+|++|++++. | .+..+++|+.|+|++|++++.
T Consensus 92 L~~N~l~~l~~~~~~~L~~L~L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 92 VNRNRLKNLNGIPSACLSRLFLDNNELRD-T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CCSSCCSCCTTCCCSSCCEEECCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CCCCccCCcCccccCcccEEEccCCccCC-C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 77777765332223667777777777765 3 3578888888888888888864 3 578888888888888888775
Q ss_pred ccccCCCCCCEEeccCccCccc
Q 006570 282 VNISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 282 ~~~~~~~~L~~L~ls~N~l~~~ 303 (640)
..+..+++|+.|++++|++++.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHhccCCCCCEEeCCCCcccCC
Confidence 5677888888888888888754
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=175.68 Aligned_cols=152 Identities=16% Similarity=0.190 Sum_probs=132.9
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCccc
Q 006570 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLR 229 (640)
Q Consensus 151 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~ 229 (640)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++.++. |..+++|++|+|++|++ +
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i---------------------~ 69 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQI---------------------S 69 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCC---------------------C
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcC---------------------C
Confidence 57888888888 6777665 6888888888888887775 77777777777776665 4
Q ss_pred ccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCcc
Q 006570 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309 (640)
Q Consensus 230 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~ 309 (640)
+..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+.
T Consensus 70 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 70 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp EECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh
Confidence 56688899999999999999999987777789999999999999999998899999999999999999999998888899
Q ss_pred CCCCCceeeeccccccC
Q 006570 310 SNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 310 ~~~~l~~l~l~~N~l~~ 326 (640)
.+++|+.+++++|.+..
T Consensus 150 ~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEEeCCCCcCC
Confidence 99999999999998864
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=176.00 Aligned_cols=153 Identities=14% Similarity=0.147 Sum_probs=132.4
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC--ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcc
Q 006570 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSL 228 (640)
Q Consensus 151 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l 228 (640)
+.+++++|.++ .+|..+. ..+++|+|++|+|++.++. |..+++|++|+|++|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i--------------------- 69 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKI--------------------- 69 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCC---------------------
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcC---------------------
Confidence 57888888887 5777664 4567888888888887553 67777777777766655
Q ss_pred cccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCc
Q 006570 229 RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI 308 (640)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~ 308 (640)
++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|
T Consensus 70 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 70 TDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred CEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh
Confidence 45566789999999999999999999888889999999999999999999889999999999999999999999999999
Q ss_pred cCCCCCceeeeccccccCc
Q 006570 309 GSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 309 ~~~~~l~~l~l~~N~l~~~ 327 (640)
..+++|+.+++++|.+++.
T Consensus 150 ~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTCTTCCEEECCSCCEECS
T ss_pred cCCCCCCEEEecCcCCcCC
Confidence 9999999999999998864
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=175.86 Aligned_cols=153 Identities=21% Similarity=0.176 Sum_probs=125.9
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N 205 (640)
+.++.+++++ +.+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|+..++. |..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 4577777777 56776554 7899999999999988888888899999999999998877766 678888888877777
Q ss_pred CCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 206 ~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
+|+ +..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+.
T Consensus 99 ~l~---------------------~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 156 (229)
T 3e6j_A 99 QLT---------------------VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156 (229)
T ss_dssp CCC---------------------CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTT
T ss_pred cCC---------------------ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHh
Confidence 664 344556788899999999999998 6788889999999999999999887777788
Q ss_pred CCCCCCEEeccCccCcccC
Q 006570 286 CSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~~ 304 (640)
.+++|+.|++++|.+....
T Consensus 157 ~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 157 RLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TCTTCCEEECTTSCBCTTB
T ss_pred CCCCCCEEEeeCCCccCCc
Confidence 8999999999999887644
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.7e-20 Score=193.61 Aligned_cols=173 Identities=18% Similarity=0.119 Sum_probs=150.3
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-cc-CcCcCCeeEccCCCCCCCCCCc---ccccceeeccc
Q 006570 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQ-RLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRN 225 (640)
Q Consensus 151 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~-~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~ 225 (640)
+.+++++|.++ .+|..+. +.++.|+|++|+|++.++. +. ++++|++|+|++|+|++..+.. +++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888888888 6787664 4699999999999999887 66 9999999999999999877654 68999999999
Q ss_pred CcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc---cCCCCCCEEeccCccCcc
Q 006570 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI---SCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 226 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---~~~~~L~~L~ls~N~l~~ 302 (640)
|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888889999999999999999999889999999999999999999988555555 579999999999999997
Q ss_pred cCCCCccCCCC--CceeeeccccccC
Q 006570 303 KLPSCIGSNSL--NRTVVSTWNCLSG 326 (640)
Q Consensus 303 ~~p~~~~~~~~--l~~l~l~~N~l~~ 326 (640)
..+..+..++. ++.+++++|.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 66667777776 4789999998764
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-22 Score=222.31 Aligned_cols=180 Identities=17% Similarity=0.165 Sum_probs=101.4
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCc-------------ccccCCccccCCCCCCEEE-ccCccCCc
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF-------------IYGEIPMEITSLKNLKSIV-LADNLLNG 186 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 186 (640)
..+++|+.|+|++|.+. .+|..+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 45666666666666663 566666666666666665554 4455666666666666666 45554321
Q ss_pred cCC------CccC--cCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcC
Q 006570 187 SVP------DLQR--LVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (640)
Q Consensus 187 ~~~------~~~~--l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 256 (640)
... .+.. ...|+.|+|++|+|++. |.. +++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~l-p~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-l 501 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-V 501 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCCC-cCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-C
Confidence 110 0000 01355566666655542 322 345555555555555 555566666666666666666664 4
Q ss_pred CccccCCCCCcEEEccCCcCCccC-CccccCCCCCCEEeccCccCcccCC
Q 006570 257 QSFLFSLPSILYLNLAGNQLSEAL-PVNISCSAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 257 p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~~~~L~~L~ls~N~l~~~~p 305 (640)
| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|
T Consensus 502 p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 502 D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 4 5566666666666666666544 5666666666666666666665444
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-20 Score=184.51 Aligned_cols=167 Identities=23% Similarity=0.283 Sum_probs=144.0
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..+..+++++|.+.+.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|.|++..| +.++++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 45667788888876543 5889999999999999995 566 69999999999999999995444 999999999999
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (640)
++|++++.++ +.. ++|++|+|++|++++. +.. +++|+.|+|++|++++. | .+..+++|+.|+|++|++++.
T Consensus 93 ~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 93 NRNRLKNLNG-IPS-ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CSSCCSCCTT-CCC-SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CCCccCCcCc-ccc-CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 9999998654 333 9999999999999875 333 78999999999999864 4 689999999999999999976
Q ss_pred ccccCCCCCcEEEccCCcCCcc
Q 006570 258 SFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 258 ~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
..+..+++|+.|++++|++++.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHhccCCCCCEEeCCCCcccCC
Confidence 6789999999999999999874
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-22 Score=225.11 Aligned_cols=179 Identities=15% Similarity=0.090 Sum_probs=156.2
Q ss_pred cCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCcc-------------CCccCCC-ccCcCcCCeeE-ccCCCCCC
Q 006570 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL-------------LNGSVPD-LQRLVLLEELN-LGGNDFGP 209 (640)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~-~~~l~~L~~L~-L~~N~l~~ 209 (640)
..+++|+.|+|++|+|+ .+|.++++|++|+.|++++|. +.+.+|. +..+++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 67899999999999998 899999999999999998886 5666665 78889999998 66665421
Q ss_pred CCC---------Cc-ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc
Q 006570 210 KFP---------SL-SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 210 ~~~---------~~-~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
... .. ...|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 100 00 2368899999999996 676 999999999999999999 789999999999999999999998
Q ss_pred CCccccCCCCCCEEeccCccCcccC-CCCccCCCCCceeeeccccccCccC
Q 006570 280 LPVNISCSAKLNFVEISHNLLIGKL-PSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~~~~-p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+| .++.+++|+.|+|++|+|++.. |..++.+++|+.|++++|.+++.++
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 67 8999999999999999999887 9999999999999999999998764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-19 Score=180.95 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=107.4
Q ss_pred CCCCCccccCCccceEEEEe-CCCcE--EEEEEeecccCCC------------------------hHHHHHHHHHHhcCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSR--VSVKCLKLKQRHL------------------------PQSLMQHVELLSKLR 505 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~~~~~E~~~l~~l~ 505 (640)
|...+.||+|+||.||+|+. .+|+. ||||+++...... ...+.+|++.|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999997 67888 9999875431110 136789999999998
Q ss_pred Cccc--ceeeeEEEecccCCCCCCCeEEEEEEccCC-C----CHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcc-cC
Q 006570 506 HRHL--VSILGHCILTYQDHPNTGSTVFLVLEHISN-G----SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH-TG 577 (640)
Q Consensus 506 h~ni--v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~-G----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~ 577 (640)
|+++ ..++++ ...++||||+.+ | +|.++... .++.....++.|++.||.||| +
T Consensus 129 ~~~i~~p~~~~~------------~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~- 189 (258)
T 1zth_A 129 EAGVSVPQPYTY------------MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE- 189 (258)
T ss_dssp HTTCCCCCEEEE------------ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCeEEEc------------CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH-
Confidence 8864 333321 125899999942 4 67766532 234567889999999999999 7
Q ss_pred CCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 578 ~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
.+|+||||||+|||+++ .++|+|||+|......
T Consensus 190 --~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~ 222 (258)
T 1zth_A 190 --AELVHADLSEYNIMYID--KVYFIDMGQAVTLRHP 222 (258)
T ss_dssp --SCEECSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred --CCEEeCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence 79999999999999998 9999999999876544
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-19 Score=169.82 Aligned_cols=153 Identities=18% Similarity=0.219 Sum_probs=77.2
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCC-CccCcCcCCe
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEE 199 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~ 199 (640)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..+ .+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34445555555555553 344 3555555555555555443 12244455555555555555544322 2444444444
Q ss_pred eEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc
Q 006570 200 LNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 200 L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
|+|++|+ +++..|..+..+++|+.|+|++|++.+.+| .+..+++|++|++++|++++
T Consensus 117 L~Ls~n~---------------------i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~- 173 (197)
T 4ezg_A 117 LDISHSA---------------------HDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD- 173 (197)
T ss_dssp EECCSSB---------------------CBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-
T ss_pred EEecCCc---------------------cCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-
Confidence 4444433 333445555566666666666665222344 45666666666666666654
Q ss_pred CCccccCCCCCCEEeccCccCc
Q 006570 280 LPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
++ .+..+++|+.|++++|++.
T Consensus 174 ~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 174 YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CT-TGGGCSSCCEEEECBC---
T ss_pred hH-HhccCCCCCEEEeeCcccC
Confidence 33 4555666666666666554
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=166.92 Aligned_cols=157 Identities=17% Similarity=0.208 Sum_probs=125.8
Q ss_pred cccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceee
Q 006570 143 KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI 222 (640)
Q Consensus 143 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ 222 (640)
....+++|++|++++|.++ .+| .+..+++|++|++++|.++.. +.+..+++|++|++++|++
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l--------------- 100 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDV--------------- 100 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTC---------------
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCcc---------------
Confidence 3466778888888888888 666 678888888888888866543 3566666666666666554
Q ss_pred cccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCc-CCccCCccccCCCCCCEEeccCccCc
Q 006570 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQ-LSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 223 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
++..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|+.|++++|+++
T Consensus 101 ------~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 101 ------TSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp ------BGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred ------CcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 55567788999999999999999998889999999999999999998 65 466 6889999999999999998
Q ss_pred ccCCCCccCCCCCceeeeccccccCc
Q 006570 302 GKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 302 ~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+ ++ .+..+++|+.|++++|++.+.
T Consensus 173 ~-~~-~l~~l~~L~~L~l~~N~i~~~ 196 (197)
T 4ezg_A 173 D-YR-GIEDFPKLNQLYAFSQTIGGK 196 (197)
T ss_dssp C-CT-TGGGCSSCCEEEECBC-----
T ss_pred C-hH-HhccCCCCCEEEeeCcccCCc
Confidence 6 44 788999999999999998753
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.7e-18 Score=159.37 Aligned_cols=128 Identities=23% Similarity=0.262 Sum_probs=56.6
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCc-cccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
+.+++++|++ +.+|..+.. +|++|+|++|.|++..|. .|.++++|++|+|++|+|++.+|. |.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 3455555555 334443322 444444444444433332 244444444444444444444332 33333333333333
Q ss_pred CCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 205 NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 205 N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
|+| ++..|..|.++++|++|+|++|+|++.+|..|..+++|++|+|++|.+++
T Consensus 88 N~l---------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKI---------------------KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCC---------------------CEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcC---------------------CccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 332 23333344445555555555555554445445555555555555555443
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=157.45 Aligned_cols=126 Identities=18% Similarity=0.244 Sum_probs=61.2
Q ss_pred CEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccccCCCCccEEEccCC
Q 006570 175 KSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN 250 (640)
Q Consensus 175 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 250 (640)
+.+++++|.++.++..+.. +|++|+|++|++++..+. .+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 5566666666554443322 555666665555544432 1344444444444444444444444444444444444
Q ss_pred cccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 251 NFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 251 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
+|++..|..|.++++|++|+|++|+|++..|..+..+++|+.|++++|.+++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 4444444444444444444444444444444444444444444444444443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-18 Score=198.18 Aligned_cols=188 Identities=19% Similarity=0.122 Sum_probs=83.7
Q ss_pred ccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCC
Q 006570 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLN 185 (640)
Q Consensus 106 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 185 (640)
+++.|.+. ..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33444432 34555666666666666666664 55655566666666666666666 66666666666666666666666
Q ss_pred ccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCC-ccEEEccCCcccCcCCccccC
Q 006570 186 GSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQ-LKQFDISSNNFVGPIQSFLFS 262 (640)
Q Consensus 186 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~ 262 (640)
.+++.|.+|++|++|+|++|.|+.....+ +++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~--- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE--- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---
T ss_pred ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc---
Confidence 44444666666666666666665322222 456666666666666666665544321 223566666666666543
Q ss_pred CCCCcEEEccCC--------cCCccCCccccCCCCCCEEeccCccCcc
Q 006570 263 LPSILYLNLAGN--------QLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 263 l~~L~~L~l~~N--------~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
|..|+++.| .+.+..+..+..+..+....+++|.+.+
T Consensus 361 ---l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 361 ---RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp --------------------------------------------CCCG
T ss_pred ---cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 334444444 3334444445556666667777776653
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=152.55 Aligned_cols=135 Identities=23% Similarity=0.271 Sum_probs=77.9
Q ss_pred CCCCCcEeecccCcCc-CCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCe
Q 006570 122 KLSNLKVLSLVSLGLW-GPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEE 199 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~ 199 (640)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|. +.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3456666666666665 45666666666666666666666643 4555666666666666666654444 334555555
Q ss_pred eEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC---ccccCCCCCcEEEccCCcC
Q 006570 200 LNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ---SFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 200 L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l 276 (640)
|+|++|++++.. .+..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+
T Consensus 100 L~Ls~N~l~~~~--------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 100 LNLSGNKLKDIS--------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EECBSSSCCSSG--------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeccCCccCcch--------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 555555443210 11455566666666666666665444 3566666666666666666
Q ss_pred Cc
Q 006570 277 SE 278 (640)
Q Consensus 277 ~~ 278 (640)
..
T Consensus 160 ~~ 161 (168)
T 2ell_A 160 QE 161 (168)
T ss_dssp CB
T ss_pred hh
Confidence 43
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=4.6e-17 Score=151.07 Aligned_cols=134 Identities=24% Similarity=0.246 Sum_probs=113.0
Q ss_pred ccccccccCccCCC-ChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSANFNI-DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~n~~~-~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
..++.|+|++|.+. +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 68999999999987 68888899999999999999999765 7899999999999999999988898888899999999
Q ss_pred ccCccCCccC--CCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 179 LADNLLNGSV--PDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 179 L~~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
|++|.|++.+ +.+..+++|++|++++|.+++..+. ....+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~------------------~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDY------------------RESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTH------------------HHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHH------------------HHHHHHhCccCcEecCCCCChh
Confidence 9999999975 4588899999988888877433220 0025667777888888888776
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=2e-16 Score=150.29 Aligned_cols=128 Identities=16% Similarity=0.162 Sum_probs=96.7
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCC
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 277 (640)
+++++++|+++..+....++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~ 91 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91 (193)
T ss_dssp TEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccC
Confidence 34555555555433334456666666677776 56777888888888888888888777777888888888888888888
Q ss_pred ccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 278 EALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 278 ~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
+..|..|..+++|+.|+|++|+|++..+..|..+++|+.+++++|.+..
T Consensus 92 ~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8777788888888888888888887666678888888888888887764
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-16 Score=147.11 Aligned_cols=130 Identities=14% Similarity=0.089 Sum_probs=79.3
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCC
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 277 (640)
+.+++++|+++.......++|+.|++++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+
T Consensus 10 ~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 89 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ 89 (177)
T ss_dssp TEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCcc
Confidence 34444444444433333445555555555555544555666666777777777666555555666667777777777776
Q ss_pred ccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 278 EALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 278 ~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+..+..+++|+.|++++|++++..+..+..+++|+.+++++|.+++.
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 90 SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 65555566666777777777776655555556666677777777766654
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-17 Score=147.80 Aligned_cols=128 Identities=25% Similarity=0.293 Sum_probs=68.4
Q ss_pred CCCCcEeecccCcCc-CCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCee
Q 006570 123 LSNLKVLSLVSLGLW-GPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEEL 200 (640)
Q Consensus 123 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L 200 (640)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|.+++.+|. +..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 355666666666665 45665556666666666666666543 4455555555555555555554333 3334455554
Q ss_pred EccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC---ccccCCCCCcEEEcc
Q 006570 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ---SFLFSLPSILYLNLA 272 (640)
Q Consensus 201 ~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~ 272 (640)
++++|++++. ..|..+..+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~--------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDL--------------------STIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSH--------------------HHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCCh--------------------HHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4444444220 112445555556666666666654443 345555555555554
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-16 Score=149.36 Aligned_cols=127 Identities=24% Similarity=0.258 Sum_probs=65.3
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGND 206 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~ 206 (640)
+++++++|+++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|++.++.
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~---------------- 72 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQ---------------- 72 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTT----------------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHh----------------
Confidence 35566666653 4554432 35566666666655 5555555555555555555555544443
Q ss_pred CCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccC
Q 006570 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISC 286 (640)
Q Consensus 207 l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 286 (640)
.|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 73 ----------------------------~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 124 (193)
T 2wfh_A 73 ----------------------------SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFND 124 (193)
T ss_dssp ----------------------------TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT
T ss_pred ----------------------------HccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhc
Confidence 3444444444444444444444444445555555555555554433334555
Q ss_pred CCCCCEEeccCccCc
Q 006570 287 SAKLNFVEISHNLLI 301 (640)
Q Consensus 287 ~~~L~~L~ls~N~l~ 301 (640)
+++|+.|++++|.+.
T Consensus 125 l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 125 LSALSHLAIGANPLY 139 (193)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred CccccEEEeCCCCee
Confidence 555555555555554
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=164.92 Aligned_cols=169 Identities=15% Similarity=0.089 Sum_probs=103.8
Q ss_pred CCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCC-------CCCC-------
Q 006570 147 FWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF-------GPKF------- 211 (640)
Q Consensus 147 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l-------~~~~------- 211 (640)
+++|+.|+|++ .++..-+.+|.+|++|+.|++++|.++.+.+. |.++.++..+.++.+.. ....
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 77777777777 66644455677777777777777777666555 66666666655544211 0000
Q ss_pred ----------------------C---------------------CcccccceeecccCcccccCCccccCCCCccEEEcc
Q 006570 212 ----------------------P---------------------SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDIS 248 (640)
Q Consensus 212 ----------------------~---------------------~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (640)
+ ..+++|+.|+|++|+++...+..|.++.+|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 0 013466666666666665555566666666666666
Q ss_pred CCcccCcCCccccCCCCCc-EEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceee
Q 006570 249 SNNFVGPIQSFLFSLPSIL-YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVV 318 (640)
Q Consensus 249 ~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~ 318 (640)
+| ++...+..|.++++|+ .+++.+ +++.+.+..|.++++|+.+++++|+++...+.+|.++++|+.++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66 5555556666666666 666666 55555556666666666666666666655556666666666654
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.9e-16 Score=145.47 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=38.6
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~ 304 (640)
.|.++++|+.|+|++|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+..
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 3445555555555555555544444555555566666666555544444455566666666666655433
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.1e-18 Score=190.85 Aligned_cols=227 Identities=15% Similarity=0.066 Sum_probs=140.2
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCC-ccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP-SKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
..|+.++++++ ....+|..+..+++|++|+|++|.+++... ..+..+++|++|+|++|...+.++..+..+++|++|+
T Consensus 270 ~~L~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 270 RKLCRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp TTCCEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred ccccccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 34455555543 234456666677777777777777644332 3356677777777773333333444445667777777
Q ss_pred cc-----------CccCCcc-CCC-ccCcCcCCeeEccCCCCCCCCCCc----ccccceeecc----cCccccc-----C
Q 006570 179 LA-----------DNLLNGS-VPD-LQRLVLLEELNLGGNDFGPKFPSL----SKNIVSVILR----NNSLRSE-----I 232 (640)
Q Consensus 179 L~-----------~N~l~~~-~~~-~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~----~N~l~~~-----~ 232 (640)
|+ .|.+++. ++. +..+++|++|+++.|++++..+.. +++|+.|+++ .|.+++. +
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~ 428 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV 428 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH
Confidence 77 3555543 222 345677777777777776543322 5667777775 5666642 3
Q ss_pred CccccCCCCccEEEccCC--cccCcCCcccc-CCCCCcEEEccCCcCCc-cCCccccCCCCCCEEeccCccCccc-CCCC
Q 006570 233 PSGLKNFDQLKQFDISSN--NFVGPIQSFLF-SLPSILYLNLAGNQLSE-ALPVNISCSAKLNFVEISHNLLIGK-LPSC 307 (640)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~L~ls~N~l~~~-~p~~ 307 (640)
+..+.++++|+.|+|++| .+++..+..+. .+++|++|+|++|++++ .++..+..+++|+.|++++|.+++. ++..
T Consensus 429 ~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 508 (592)
T 3ogk_B 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAA 508 (592)
T ss_dssp HHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHH
T ss_pred HHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHH
Confidence 333556777888888643 35554444443 37778888888888765 3444556778888888888887654 3344
Q ss_pred ccCCCCCceeeeccccccCc
Q 006570 308 IGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+++|+.|++++|+++..
T Consensus 509 ~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 509 VTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHCSSCCEEEEESCBCCTT
T ss_pred HHhcCccCeeECcCCcCCHH
Confidence 45677888888888877653
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-18 Score=165.18 Aligned_cols=134 Identities=19% Similarity=0.247 Sum_probs=85.4
Q ss_pred hhcCCCCCcEeecccCcCcCCCCc------cccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCcc
Q 006570 119 ILTKLSNLKVLSLVSLGLWGPLPS------KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQ 192 (640)
Q Consensus 119 ~l~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 192 (640)
.+.....++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++..++.+.
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~ 90 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDA 90 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhh
Confidence 356667788888888888888776 78888888888888888875 66 77788888888888888875544466
Q ss_pred CcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCC-ccccCCCCccEEEccCCcccCc
Q 006570 193 RLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGP 255 (640)
Q Consensus 193 ~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 255 (640)
.+++|++|+|++|++++. |.. +++|+.|++++|++++..+ ..+..+++|++|++++|.+++.
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 667777777777776542 211 3344444444444442111 2344444444444444444433
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-16 Score=143.65 Aligned_cols=129 Identities=19% Similarity=0.197 Sum_probs=108.3
Q ss_pred ccccccccCccCCC-ChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSANFNI-DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~n~~~-~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
..++.|++++|.+. +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 68999999999998 78888899999999999999999776 6799999999999999999987998888899999999
Q ss_pred ccCccCCccC--CCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEcc
Q 006570 179 LADNLLNGSV--PDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDIS 248 (640)
Q Consensus 179 L~~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (640)
+++|.+++.+ +.+..+++|++|++++|++++..+. .+..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~------------------~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDY------------------RENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTH------------------HHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHH------------------HHHHHHHCCCcccccCC
Confidence 9999999864 5588999999998888877543220 00245666677777665
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-16 Score=165.99 Aligned_cols=142 Identities=13% Similarity=0.133 Sum_probs=100.5
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--------------CChHHH--------HHHHHHHhcCCCcc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--------------HLPQSL--------MQHVELLSKLRHRH 508 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~--------~~E~~~l~~l~h~n 508 (640)
.-|.+...||+|+||.||+|...+|+.||||+++.... ...... .+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999988899999999764210 011122 23555555554333
Q ss_pred cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 509 iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
+....-+.. ...+|||||+++++|.++... .....++.|++.+|.|||+ .+|||||||
T Consensus 175 v~vp~p~~~----------~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~---~gIVHrDLK 232 (397)
T 4gyi_A 175 FPVPEPIAQ----------SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAK---HGLIHGDFN 232 (397)
T ss_dssp CSCCCEEEE----------ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred CCCCeeeec----------cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHH---CCCcCCCCC
Confidence 221111111 113799999999888765421 1245688999999999998 699999999
Q ss_pred CCceeecCCC----------ceEEeCCCCCccccCC
Q 006570 589 TENILLDKAL----------TAKLSGYNIPLPSKVR 614 (640)
Q Consensus 589 ~~NILl~~~~----------~~kl~DfGla~~~~~~ 614 (640)
|.|||+++++ .+.|+||+-+.....+
T Consensus 233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp 268 (397)
T 4gyi_A 233 EFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHP 268 (397)
T ss_dssp TTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTST
T ss_pred HHHEEEeCCCCcccccccccceEEEEeCCcccCCCC
Confidence 9999998876 3899999988765433
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-17 Score=186.92 Aligned_cols=112 Identities=10% Similarity=0.083 Sum_probs=66.0
Q ss_pred ccccceeecccCcccccCCccccC-CCCccEEEcc----CCcccCc-----CCccccCCCCCcEEEccCC--cCCccCCc
Q 006570 215 SKNIVSVILRNNSLRSEIPSGLKN-FDQLKQFDIS----SNNFVGP-----IQSFLFSLPSILYLNLAGN--QLSEALPV 282 (640)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~l~~N--~l~~~~p~ 282 (640)
+++|++|+++.|++++..+..++. +++|+.|+|+ .|++++. ++..+.++++|++|+|+++ .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 456666666666666555555544 6666666664 5556543 2333455666777776532 24443333
Q ss_pred ccc-CCCCCCEEeccCccCcc-cCCCCccCCCCCceeeeccccccC
Q 006570 283 NIS-CSAKLNFVEISHNLLIG-KLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 283 ~~~-~~~~L~~L~ls~N~l~~-~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
.+. .+++|+.|++++|++++ .++..+..+++|+.|++++|.+++
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 332 36677777777777765 334445666777777777777653
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.62 E-value=6e-16 Score=144.72 Aligned_cols=131 Identities=19% Similarity=0.229 Sum_probs=74.7
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCC-CCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcC
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW-SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLL 197 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L 197 (640)
+.++++|+.|+|++|.++ .+|. +..+. +|++|+|++|.|++. +.|..+++|++|+|++|+|++.++. +..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455666667777766665 3443 33333 666666666666643 4566666666666666666665555 3555666
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCc--cccCCCCccEEEccCCcccCcCCcc----ccCCCCCcEEEc
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS--GLKNFDQLKQFDISSNNFVGPIQSF----LFSLPSILYLNL 271 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l 271 (640)
++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+
T Consensus 91 ~~L~L~~N~i~----------------------~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 91 TELILTNNSLV----------------------ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CEEECCSCCCC----------------------CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CEEECCCCcCC----------------------cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 66655555552 2222 4555566666666666665 23332 555556666666
Q ss_pred cCCcCC
Q 006570 272 AGNQLS 277 (640)
Q Consensus 272 ~~N~l~ 277 (640)
++|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 555543
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.61 E-value=5.1e-18 Score=162.15 Aligned_cols=135 Identities=22% Similarity=0.262 Sum_probs=95.2
Q ss_pred ccCCCCCCEEEcccCcccccCCc------cccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc---
Q 006570 144 INRFWSLEVLNISSNFIYGEIPM------EITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--- 214 (640)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--- 214 (640)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|.+++. |.+.++++|++|+|++|+++. +|..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~~~~~l~~L~~L~l~~n~l~~-l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-SSLSGMENLRILSLGRNLIKK-IENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-CCHHHHTTCCEEEEEEEEECS-CSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-cccccCCCCCEEECCCCCccc-ccchhhc
Confidence 55667888899999999988887 899999999999999999985 488889999999999988863 3433
Q ss_pred ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC-ccccCCCCCcEEEccCCcCCccCCc
Q 006570 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSEALPV 282 (640)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~ 282 (640)
+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 3566666666666654 33 45556666666666666654222 3455666666666666666554443
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=143.01 Aligned_cols=133 Identities=17% Similarity=0.136 Sum_probs=85.7
Q ss_pred cccCCCCCCEEEcccCcccccCCccccCCC-CCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCccccccee
Q 006570 143 KINRFWSLEVLNISSNFIYGEIPMEITSLK-NLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSV 221 (640)
Q Consensus 143 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L 221 (640)
.+.++.+|++|+|++|.++ .+|. +..+. +|++|+|++|.|++. +.+..+++|++|+|++|++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l-------------- 76 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRI-------------- 76 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCC--------------
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcc--------------
Confidence 3566777777777777777 4443 33333 777777777777665 4566666666666655554
Q ss_pred ecccCcccccCCccccCCCCccEEEccCCcccCcCCc--cccCCCCCcEEEccCCcCCccCCcc----ccCCCCCCEEec
Q 006570 222 ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS--FLFSLPSILYLNLAGNQLSEALPVN----ISCSAKLNFVEI 295 (640)
Q Consensus 222 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~----~~~~~~L~~L~l 295 (640)
++..|..|..+++|+.|+|++|+|+ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.||+
T Consensus 77 -------~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 77 -------CRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp -------CEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETT
T ss_pred -------cccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCC
Confidence 3222333466777777888877775 3454 67777777777777777764 4543 666777777777
Q ss_pred cCccCc
Q 006570 296 SHNLLI 301 (640)
Q Consensus 296 s~N~l~ 301 (640)
++|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 777654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.9e-15 Score=152.08 Aligned_cols=175 Identities=10% Similarity=0.061 Sum_probs=143.1
Q ss_pred hhhcC--------CCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccC----C
Q 006570 118 TILTK--------LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL----N 185 (640)
Q Consensus 118 ~~l~~--------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~ 185 (640)
.+|.+ +++|+.|+|.+ .++..-+.+|.++++|+.|+|++|.+....+..|.++.++..+.+..+.. .
T Consensus 87 ~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 46777 99999999998 88766667899999999999999999867777788888888887766322 0
Q ss_pred ccCCC-c--------------------------------------------------cCcCcCCeeEccCCCCCCCCCCc
Q 006570 186 GSVPD-L--------------------------------------------------QRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 186 ~~~~~-~--------------------------------------------------~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
...+. | ..+++|+.|+|++|+++...+..
T Consensus 166 ~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~a 245 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFT 245 (329)
T ss_dssp TTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTT
T ss_pred cccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhh
Confidence 00000 0 13789999999999987655544
Q ss_pred ---ccccceeecccCcccccCCccccCCCCcc-EEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCC
Q 006570 215 ---SKNIVSVILRNNSLRSEIPSGLKNFDQLK-QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290 (640)
Q Consensus 215 ---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L 290 (640)
+.+|+.|+|.+| ++...+.+|.++.+|+ .|++.+ +++...+..|.++++|+.|++++|+++...+..|.++++|
T Consensus 246 F~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 246 FAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCC
T ss_pred hhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcch
Confidence 679999999998 8877788999999999 999998 7887778999999999999999999998888899999999
Q ss_pred CEEec
Q 006570 291 NFVEI 295 (640)
Q Consensus 291 ~~L~l 295 (640)
+.++.
T Consensus 324 ~~ly~ 328 (329)
T 3sb4_A 324 KLIYK 328 (329)
T ss_dssp CEEEC
T ss_pred hhhcc
Confidence 99864
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=134.61 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 197 LEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 197 L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
.+.+++++|+++.......++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 35566666666544333455666666677777766677788888888888888888877776777888888888888888
Q ss_pred CccCCccccCCCCCCEEeccCccCccc
Q 006570 277 SEALPVNISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 277 ~~~~p~~~~~~~~L~~L~ls~N~l~~~ 303 (640)
++..+..|..+++|+.|+|++|.++..
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 776666677788888888888877644
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.53 E-value=4e-14 Score=131.94 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=69.0
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCC
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 277 (640)
+.+++++|+++..++...++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~ 94 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK 94 (174)
T ss_dssp SEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccc
Confidence 45555555554333333455566666666666666667777777777777777777665556677777777777777777
Q ss_pred ccCCccccCCCCCCEEeccCccCcc
Q 006570 278 EALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 278 ~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
+..+..|..+++|+.|+|++|.+..
T Consensus 95 ~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 95 SIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred eeCHHHhccccCCCEEEeCCCCccc
Confidence 6555557777777777777777663
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.50 E-value=9.7e-14 Score=128.84 Aligned_cols=109 Identities=15% Similarity=0.083 Sum_probs=99.5
Q ss_pred ccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 217 NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 217 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
..+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 5678999999998 5777664 789999999999999999999999999999999999998878888999999999999
Q ss_pred CccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 297 HNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 297 ~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
+|+|++..|..|..+++|+.|++++|.++...
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99999888888999999999999999988653
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.48 E-value=8.5e-13 Score=139.73 Aligned_cols=218 Identities=11% Similarity=0.043 Sum_probs=169.3
Q ss_pred CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 99 ~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
...|+.+.|+.+ +...-..+|.++ +|+.++|.+ .+...-+..|.++++|+.++|++|+++ .+|.....+.+|+.+.
T Consensus 134 ~~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~ 209 (401)
T 4fdw_A 134 NSQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVL 209 (401)
T ss_dssp TCCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEE
T ss_pred cCCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEE
Confidence 347888888776 444555678774 699999985 666666678999999999999999998 4554433368999999
Q ss_pred ccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCccc--
Q 006570 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV-- 253 (640)
Q Consensus 179 L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-- 253 (640)
|..| ++.+... |.++++|+.++|..| ++...... -.+|+.+.+ .|.++..-+.+|.++++|+.+++.+|.+.
T Consensus 210 lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 210 LPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred eCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 9855 7766665 899999999999875 43222222 268889999 56677677889999999999999998875
Q ss_pred ---CcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 254 ---GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 254 ---~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
...+..|.++++|+.++|. |.++..-...|.++.+|+.++|.+| ++..-+.+|.++ +|+.+++.+|.+..
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 3556788999999999999 5587777788999999999999665 666667788888 99999999886554
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.48 E-value=2e-13 Score=127.26 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=97.7
Q ss_pred ccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 217 NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 217 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
.-+.+++++|+++ .+|..+. ++|+.|+|++|+|++.+|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 13 ~~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 13 DQTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp CSSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 3468999999996 6787765 899999999999999999999999999999999999998777778999999999999
Q ss_pred CccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 297 HNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 297 ~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+|+|++..+..|..+++|+.|++++|.+...
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 9999987777799999999999999988864
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-12 Score=138.30 Aligned_cols=237 Identities=11% Similarity=0.043 Sum_probs=181.2
Q ss_pred EEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcc
Q 006570 77 VTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNIS 156 (640)
Q Consensus 77 v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 156 (640)
++.+.+..+ + ..+....+. ...|+.+.|++ .+...-+.+|.+|++|+.++|++|+++..-...|. ..+|+.+.|.
T Consensus 137 L~~i~l~~~-i-~~I~~~aF~-~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 137 IAKVVLNEG-L-KSIGDMAFF-NSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CSEEECCTT-C-CEECTTTTT-TCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred ccEEEeCCC-c-cEECHHhcC-CCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 555555543 2 123333333 35788888886 44455567899999999999999999665556666 6999999999
Q ss_pred cCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCC---cccccceeecccCccc---
Q 006570 157 SNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS---LSKNIVSVILRNNSLR--- 229 (640)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~---~~~~L~~L~l~~N~l~--- 229 (640)
.| +...-...|.++++|+.++|..| ++.+... |.+ .+|+.++|. |.++..... .+++|+.+.+.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 55 77566677999999999999976 5655555 777 799999995 445433333 3689999999998875
Q ss_pred --ccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCC
Q 006570 230 --SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 230 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
...+..|.+|++|+.++|. |.++......|.++++|+.++|..| ++..-+.+|.++ +|+.+++++|.+....+..
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~ 364 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKV 364 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSS
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccccc
Confidence 4667889999999999999 5587677888999999999999665 777777899999 9999999999988777777
Q ss_pred ccCCC-CCceeeecccccc
Q 006570 308 IGSNS-LNRTVVSTWNCLS 325 (640)
Q Consensus 308 ~~~~~-~l~~l~l~~N~l~ 325 (640)
|..++ .+..+++..+.+.
T Consensus 365 F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 365 WYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCCSCTTCCEEEECGGGHH
T ss_pred ccCCCCCccEEEeCHHHHH
Confidence 77764 6777877665543
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-15 Score=169.01 Aligned_cols=179 Identities=11% Similarity=0.031 Sum_probs=103.2
Q ss_pred CCCCCCEEEcccCcccccCCc-cccCCCCCCEEEccCccCCc-cCCC-ccCcCcCCeeEccC---------CCCCCCCC-
Q 006570 146 RFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLADNLLNG-SVPD-LQRLVLLEELNLGG---------NDFGPKFP- 212 (640)
Q Consensus 146 ~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~-~~~~-~~~l~~L~~L~L~~---------N~l~~~~~- 212 (640)
.+++|++|+|++|.+++.... .+.++++|+.|++++| ++. .++. ...+++|++|+|++ |.+++...
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 445666666666665533222 2445666666666665 321 1122 22466677776632 33332111
Q ss_pred ---CcccccceeecccCcccccCCcccc-CCCCccEEEcc--C----CcccCcC-----CccccCCCCCcEEEccCCcCC
Q 006570 213 ---SLSKNIVSVILRNNSLRSEIPSGLK-NFDQLKQFDIS--S----NNFVGPI-----QSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 213 ---~~~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~ 277 (640)
..+++|+.|.++.|.+++..+..+. .+++|+.|+|+ + |++++.. +..+..+++|+.|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 1146777777777777665555554 47778888887 3 4555221 12255667777888766 555
Q ss_pred ccCCccccC-CCCCCEEeccCccCcccCCCCc-cCCCCCceeeeccccccC
Q 006570 278 EALPVNISC-SAKLNFVEISHNLLIGKLPSCI-GSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 278 ~~~p~~~~~-~~~L~~L~ls~N~l~~~~p~~~-~~~~~l~~l~l~~N~l~~ 326 (640)
+..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.+++
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 544444444 6778888888888765544444 457778888888887743
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-15 Score=169.04 Aligned_cols=208 Identities=13% Similarity=0.034 Sum_probs=152.4
Q ss_pred hhhhhcCCCCCcEeecccCcCcCCC-CccccCCCCCCEEEcccCcccc-cCCccccCCCCCCEEEccC---------ccC
Q 006570 116 FFTILTKLSNLKVLSLVSLGLWGPL-PSKINRFWSLEVLNISSNFIYG-EIPMEITSLKNLKSIVLAD---------NLL 184 (640)
Q Consensus 116 ~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~---------N~l 184 (640)
++..+..+++|+.|+|++|.+++.. +..+..+++|++|+|++| +.. .++.....+++|+.|+|++ |.+
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l 359 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVAL 359 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCC
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCC
Confidence 4445557899999999999976443 233678999999999998 442 2333344689999999943 555
Q ss_pred CccCC-Cc-cCcCcCCeeEccCCCCCCCCCC----cccccceeecc--c----Cccccc-----CCccccCCCCccEEEc
Q 006570 185 NGSVP-DL-QRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILR--N----NSLRSE-----IPSGLKNFDQLKQFDI 247 (640)
Q Consensus 185 ~~~~~-~~-~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~--~----N~l~~~-----~p~~~~~l~~L~~L~L 247 (640)
++... .+ ..+++|++|+++.|++++..+. .+++|+.|+++ + |.++.. ++..+..+++|+.|+|
T Consensus 360 ~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L 439 (594)
T 2p1m_B 360 TEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSL 439 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEEC
T ss_pred CHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEee
Confidence 54322 23 3588999999999998765433 26799999999 4 566521 2223667899999999
Q ss_pred cCCcccCcCCccccC-CCCCcEEEccCCcCCccCCccc-cCCCCCCEEeccCccCcccCCC-CccCCCCCceeeeccccc
Q 006570 248 SSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLLIGKLPS-CIGSNSLNRTVVSTWNCL 324 (640)
Q Consensus 248 s~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~~~~L~~L~ls~N~l~~~~p~-~~~~~~~l~~l~l~~N~l 324 (640)
++ ++++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++..+. ....+++|+.|++++|.+
T Consensus 440 ~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 440 SG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 87 776655556665 8999999999999977555444 5689999999999999654443 345578999999999987
Q ss_pred c
Q 006570 325 S 325 (640)
Q Consensus 325 ~ 325 (640)
+
T Consensus 519 ~ 519 (594)
T 2p1m_B 519 S 519 (594)
T ss_dssp B
T ss_pred C
Confidence 4
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=2e-14 Score=150.81 Aligned_cols=87 Identities=18% Similarity=0.214 Sum_probs=48.2
Q ss_pred ccceeecccCcccc----cCCccccCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCcc----CCccc
Q 006570 217 NIVSVILRNNSLRS----EIPSGLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEA----LPVNI 284 (640)
Q Consensus 217 ~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~ 284 (640)
+|+.|+|++|.|+. .++..+..+++|++|||++|.|+.. ++..+...++|+.|+|++|.|+.. ++..+
T Consensus 156 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L 235 (372)
T 3un9_A 156 QITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAA 235 (372)
T ss_dssp CCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHH
T ss_pred ccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHH
Confidence 34444444444432 2333445566677777777776532 234455566677777777776542 23334
Q ss_pred cCCCCCCEEeccCccCccc
Q 006570 285 SCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 285 ~~~~~L~~L~ls~N~l~~~ 303 (640)
...++|++|||++|.|+..
T Consensus 236 ~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 236 REHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHCSSCCEEECTTSSCCHH
T ss_pred HhCCCCCEEeccCCCCCHH
Confidence 4456667777777766543
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-12 Score=133.18 Aligned_cols=92 Identities=23% Similarity=0.139 Sum_probs=80.5
Q ss_pred hhhhhcCCCCCcEeeccc-CcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccC
Q 006570 116 FFTILTKLSNLKVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQR 193 (640)
Q Consensus 116 ~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~ 193 (640)
+|. |..+++|+.|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++|+|+++++. |..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 566 88889999999996 999887778899999999999999999988888899999999999999999998887 555
Q ss_pred cCcCCeeEccCCCCCC
Q 006570 194 LVLLEELNLGGNDFGP 209 (640)
Q Consensus 194 l~~L~~L~L~~N~l~~ 209 (640)
++ |++|+|++|.|.-
T Consensus 103 ~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 103 LS-LQELVLSGNPLHC 117 (347)
T ss_dssp CC-CCEEECCSSCCCC
T ss_pred CC-ceEEEeeCCCccC
Confidence 55 9999999998864
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-12 Score=131.80 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=60.7
Q ss_pred eeEccCC-CCCCCCCCc--ccccceeeccc-CcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCC
Q 006570 199 ELNLGGN-DFGPKFPSL--SKNIVSVILRN-NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274 (640)
Q Consensus 199 ~L~L~~N-~l~~~~~~~--~~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 274 (640)
.+++++| +|+..++ . +++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++.+|..|.++++|++|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 4566666 6654332 3 34566666664 6666655566666666666666666666666666666666666666666
Q ss_pred cCCccCCccccCCCCCCEEeccCccCc
Q 006570 275 QLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 275 ~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
+|++..+..|..++ |+.|+|++|.|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66654444444443 666666666665
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-13 Score=144.94 Aligned_cols=159 Identities=19% Similarity=0.151 Sum_probs=105.1
Q ss_pred CCCCEEEcccCcccccCCccccC-----CCCCCEEEccCccCCccCCC--ccCcCcCCeeEccCCCCCCCCCCcccccce
Q 006570 148 WSLEVLNISSNFIYGEIPMEITS-----LKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLSKNIVS 220 (640)
Q Consensus 148 ~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~ 220 (640)
+.|++|+|++|.|+......+.. .++|+.|+|++|.|+..... ...+.+|++|+|
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~L------------------ 133 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGL------------------ 133 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEEC------------------
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhc------------------
Confidence 45677777777776433333222 24666666666665432211 122344455555
Q ss_pred eecccCcccccCCccc-----cCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCcc----CCccccCC
Q 006570 221 VILRNNSLRSEIPSGL-----KNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEA----LPVNISCS 287 (640)
Q Consensus 221 L~l~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~ 287 (640)
++|.++......+ ...++|+.|+|++|.|+.. ++..+..+++|++|+|++|+|+.. ++..+...
T Consensus 134 ---s~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 134 ---QLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp ---CSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred ---CCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 4454443222222 2467899999999999752 445557889999999999999752 35567778
Q ss_pred CCCCEEeccCccCccc----CCCCccCCCCCceeeeccccccCc
Q 006570 288 AKLNFVEISHNLLIGK----LPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 288 ~~L~~L~ls~N~l~~~----~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++|+.|+|++|.|+.. ++..+...+.|+.|++++|.++..
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 8999999999999853 344455678899999999998764
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.8e-11 Score=121.89 Aligned_cols=148 Identities=9% Similarity=0.022 Sum_probs=112.4
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~ 524 (640)
+......|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~------- 80 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER------- 80 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-------
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-------
Confidence 3445567877788888888999999864 6899999987533233456899999999884 667888888774
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccC---------------------------
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG--------------------------- 577 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~--------------------------- 577 (640)
.....|+||||++|.+|.+.+. +......++.+++++++.||+-
T Consensus 81 -~~~~~~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T 3tm0_A 81 -HDGWSNLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp -ETTEEEEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred -cCCceEEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccc
Confidence 2345799999999999987642 1122346788889999999971
Q ss_pred -----------------------------CCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 578 -----------------------------VAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 578 -----------------------------~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
....++|+|++|.||+++++..+.|+||+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998776678999998754
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.09 E-value=6.9e-11 Score=117.21 Aligned_cols=130 Identities=13% Similarity=0.026 Sum_probs=94.0
Q ss_pred ccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc--cceeeeEEEecccCCCCCCCeEEEEEEcc
Q 006570 460 GEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVSILGHCILTYQDHPNTGSTVFLVLEHI 537 (640)
Q Consensus 460 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~ 537 (640)
+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++.. .++..++||||+
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~--------~~~~~~~v~e~i 97 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT--------EAGRDWLLLGEV 97 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE--------CSSCEEEEEECC
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc--------CCCCCEEEEEec
Confidence 456669999998777888999987643 2356788999998885544 455777653 234479999999
Q ss_pred CCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC---------------------------------------
Q 006570 538 SNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV--------------------------------------- 578 (640)
Q Consensus 538 ~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------------- 578 (640)
+|.++. ... .+ ...++.++++.|+.||+..
T Consensus 98 ~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 98 PGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp SSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred CCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 998884 211 11 2356677777777777521
Q ss_pred ----------------CCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 579 ----------------APGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 579 ----------------~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
...++|+|++|.||+++++..+.|.|||.+...
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999988777789999998653
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.98 E-value=6.9e-11 Score=122.87 Aligned_cols=186 Identities=18% Similarity=0.180 Sum_probs=106.0
Q ss_pred hhhhcCCCCCcEeecccCcC---------cCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCcc
Q 006570 117 FTILTKLSNLKVLSLVSLGL---------WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGS 187 (640)
Q Consensus 117 ~~~l~~l~~L~~L~L~~n~l---------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 187 (640)
..++.++++|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++..
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChH
Confidence 34456778888888865432 1234455677888889988887311 3343 33 78888888888877543
Q ss_pred CCC-c--cCcCcCCeeEccC--CCCCCCCCCcccccceeecccCcccccCCccc--cCCCCccEEEccCCcccCcCCccc
Q 006570 188 VPD-L--QRLVLLEELNLGG--NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGL--KNFDQLKQFDISSNNFVGPIQSFL 260 (640)
Q Consensus 188 ~~~-~--~~l~~L~~L~L~~--N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~ 260 (640)
.-. + ..+++|++|+|+. |...+.. .+. .+...+ ..+++|+.|+|++|.+....+..+
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~---------------~~~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDG---------------DMN-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCS---------------CGG-GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred HHHHHHHccCCCCcEEEEeccccccccch---------------hHH-HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 222 3 3678888888753 2211110 000 000111 245677777777777764333333
Q ss_pred c---CCCCCcEEEccCCcCCcc----CCccccCCCCCCEEeccCccCcccCCCCccC-CCCCceeeecccc
Q 006570 261 F---SLPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNLLIGKLPSCIGS-NSLNRTVVSTWNC 323 (640)
Q Consensus 261 ~---~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~-~~~l~~l~l~~N~ 323 (640)
. .+++|+.|+|+.|++.+. ++..+..+++|+.|++++|.++...-..+.. + ...++++.|.
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 2 466777777777777653 3333345677777888777766432222221 1 2446666655
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.2e-09 Score=112.02 Aligned_cols=144 Identities=12% Similarity=0.154 Sum_probs=104.3
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEee--ccc-CCChHHHHHHHHHHhcCC--CcccceeeeEEEecccCCCCCCCeE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLK--LKQ-RHLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++... ......
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~-----~~~g~~ 116 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE-----SVIGRA 116 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT-----TTTSSC
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC-----CccCCe
Confidence 5678999999999998754 678888775 322 122457888999999886 45577888876421 112346
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC--------------------------------
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-------------------------------- 578 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------- 578 (640)
|+||||+++..+.+.. ...++..++..++.++++.|+.||.-.
T Consensus 117 ~~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 8999999998775422 223678888899999999999999620
Q ss_pred -----------------------CCCeeccCCCCCceeecCCCc--eEEeCCCCCcc
Q 006570 579 -----------------------APGIFGNNLKTENILLDKALT--AKLSGYNIPLP 610 (640)
Q Consensus 579 -----------------------~~~iiHrDlk~~NILl~~~~~--~kl~DfGla~~ 610 (640)
...++|+|+++.||+++.++. +.|.||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999999864
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.6e-10 Score=116.63 Aligned_cols=180 Identities=12% Similarity=0.173 Sum_probs=104.1
Q ss_pred CCCcEeecccCcCcC-C-------CCccccCCCCCCEEEcccCccc---------ccCCccccCCCCCCEEEccCccCCc
Q 006570 124 SNLKVLSLVSLGLWG-P-------LPSKINRFWSLEVLNISSNFIY---------GEIPMEITSLKNLKSIVLADNLLNG 186 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~-~-------~p~~~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~ 186 (640)
+.++.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 345566665444432 1 1223456677888877654321 1122333445555555555542111
Q ss_pred cCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCcccc--CCCCccEEEccC--CcccCc-----CC
Q 006570 187 SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLK--NFDQLKQFDISS--NNFVGP-----IQ 257 (640)
Q Consensus 187 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p 257 (640)
++.+. + ++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +.
T Consensus 187 -l~~~~-~---------------------~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 187 -IGKKP-R---------------------PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp -CCSCB-C---------------------TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred -ecccc-C---------------------CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 11121 3 4455555555544432222332 678888888863 332221 11
Q ss_pred ccc--cCCCCCcEEEccCCcCCccCCccc---cCCCCCCEEeccCccCccc----CCCCccCCCCCceeeeccccccC
Q 006570 258 SFL--FSLPSILYLNLAGNQLSEALPVNI---SCSAKLNFVEISHNLLIGK----LPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 258 ~~~--~~l~~L~~L~l~~N~l~~~~p~~~---~~~~~L~~L~ls~N~l~~~----~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..+ ..+++|+.|+|.+|.+....+..+ ..+++|+.|||+.|.+.+. ++..+..+++|+.|+++.|+++.
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 122 257999999999999975433333 2578999999999999874 44455567899999999998775
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.88 E-value=5e-08 Score=103.00 Aligned_cols=126 Identities=15% Similarity=0.006 Sum_probs=66.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc-------------------
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG------------------- 135 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~------------------- 135 (640)
..++++.|..+ + ..++...+.+...|+.++|+++ +...-..+|.+++.|+.+.+..+-
T Consensus 71 ~~L~~i~lp~~-i-~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPST-V-REIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCTT-C-CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCCC-c-cCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccC
Confidence 35666766533 2 1233334445567777777654 222233456666666665554321
Q ss_pred --CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCC
Q 006570 136 --LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 136 --l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N 205 (640)
....-...|.++++|+.+.+..+... .-...|.++.+|+.+.+..| ++.+... |.++..|+.+.+..+
T Consensus 148 ~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 148 EGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred ccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 00111234666777777777655332 44445667777777777655 3333332 555666665555443
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.9e-08 Score=103.85 Aligned_cols=217 Identities=12% Similarity=0.019 Sum_probs=145.1
Q ss_pred CcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCC
Q 006570 95 PTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174 (640)
Q Consensus 95 ~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 174 (640)
.+.+...|+.+.++++. ...-..+|.++++|+.+++..| +...-...|.++..|+.+.+..+... +.+......+|
T Consensus 157 aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l 232 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGV 232 (394)
T ss_dssp TTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCC
T ss_pred hhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCC
Confidence 34455778888887654 2344567888999999988766 54444567888888888888776543 33444556788
Q ss_pred CEEEccCccCCccCCC-ccCcCcCCeeEccCCCCC--CCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCc
Q 006570 175 KSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251 (640)
Q Consensus 175 ~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~--~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 251 (640)
+.+.+..+ ++.+... |..+..|+.+.+..+... .........++.+....+.+ ....|..+.+|+.+.+..+
T Consensus 233 ~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 233 KNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp CEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-
T ss_pred ceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc-
Confidence 88877644 3333333 777888888888766432 11122245666666655443 2346777888888888654
Q ss_pred ccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccc
Q 006570 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
++..-..+|.++.+|+.++|..+ ++.+-..+|.++.+|+.+++..| ++..-..+|.++.+|+.+++..+
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 55455667778888888888644 66555677888888888888766 66555667888888888887654
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-06 Score=92.44 Aligned_cols=86 Identities=10% Similarity=0.131 Sum_probs=40.2
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
..|.++.+|+.+.+. +.++......|.++.+|+.++|..| ++.+-..+|.++.+|+.+.+..+ ++..-..+|.++++
T Consensus 282 ~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 282 GAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp TTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred cccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 334444444444443 2333333344555555555555433 33333445555555555555433 33233344555555
Q ss_pred Cceeeeccc
Q 006570 314 NRTVVSTWN 322 (640)
Q Consensus 314 l~~l~l~~N 322 (640)
|+.+++.+|
T Consensus 359 L~~i~~~~~ 367 (394)
T 4gt6_A 359 LNNIEYSGS 367 (394)
T ss_dssp CCEEEESSC
T ss_pred CCEEEECCc
Confidence 555555444
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.61 E-value=3.8e-09 Score=104.28 Aligned_cols=92 Identities=27% Similarity=0.309 Sum_probs=54.2
Q ss_pred hcCCCCCcE--eecccCcC---cCCCCccccCCCCCCEEEcccCcccc--cCCccccCCCCCCEEEccCccCCccCCCcc
Q 006570 120 LTKLSNLKV--LSLVSLGL---WGPLPSKINRFWSLEVLNISSNFIYG--EIPMEITSLKNLKSIVLADNLLNGSVPDLQ 192 (640)
Q Consensus 120 l~~l~~L~~--L~L~~n~l---~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 192 (640)
|...+.|.. ++++.|.. .+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. .++.
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~ 215 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELD 215 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhh
Confidence 444444544 55566632 22222222456777888888887776 4556666777777777777777765 2233
Q ss_pred CcC--cCCeeEccCCCCCCCCC
Q 006570 193 RLV--LLEELNLGGNDFGPKFP 212 (640)
Q Consensus 193 ~l~--~L~~L~L~~N~l~~~~~ 212 (640)
.+. +|++|+|++|.+.+.+|
T Consensus 216 ~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 216 KIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGTTSCCSEEECTTSTTGGGCS
T ss_pred hcccCCcceEEccCCcCccccC
Confidence 333 66666666666654443
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.7e-08 Score=99.31 Aligned_cols=168 Identities=15% Similarity=0.161 Sum_probs=110.4
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-Ccc--cceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRH--LVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.++|+.+. +.. +.++++... + .......|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~----~-~~~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGM----P-SETYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECC----C-CSSCSCSCE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecC----C-CCCCCcceE
Confidence 4668999999999874 46888886532 23467899999998873 333 333433321 1 011123589
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhccc------------------------------------
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT------------------------------------ 576 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~------------------------------------ 576 (640)
||||++|.++.+... ..++..++..++.++++.++.||+
T Consensus 94 vm~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP 168 (304)
T ss_dssp EEECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred EEcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence 999999988865332 124566666677777777666664
Q ss_pred -------------------CCCCCeeccCCCCCceeecC--CCceEEeCCCCCccccCC--------C---Cc-------
Q 006570 577 -------------------GVAPGIFGNNLKTENILLDK--ALTAKLSGYNIPLPSKVR--------N---TL------- 617 (640)
Q Consensus 577 -------------------~~~~~iiHrDlk~~NILl~~--~~~~kl~DfGla~~~~~~--------~---~~------- 617 (640)
...+.++|+|++|.||++++ +..+.|.||+.+...... . ..
T Consensus 169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHH
Confidence 11246899999999999998 566889999998643221 0 00
Q ss_pred --cCC-----------CCccceehhhHHHHHHhhc
Q 006570 618 --SFH-----------TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 618 --~~~-----------~~~~DvwS~Gvvl~elltG 639 (640)
... ....+.|++|.+++++.+|
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g 283 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYG 283 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000 1125889999999999887
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.1e-08 Score=98.93 Aligned_cols=79 Identities=27% Similarity=0.368 Sum_probs=66.9
Q ss_pred cCCCCCcEeecccCcCcC--CCCccccCCCCCCEEEcccCcccccCCccccCCC--CCCEEEccCccCCccCCC------
Q 006570 121 TKLSNLKVLSLVSLGLWG--PLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK--NLKSIVLADNLLNGSVPD------ 190 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~------ 190 (640)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 678999999999999988 5677788999999999999999965 3455555 999999999999987662
Q ss_pred --ccCcCcCCeeE
Q 006570 191 --LQRLVLLEELN 201 (640)
Q Consensus 191 --~~~l~~L~~L~ 201 (640)
+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 56788888876
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.5e-06 Score=87.91 Aligned_cols=86 Identities=7% Similarity=0.109 Sum_probs=60.8
Q ss_pred CccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCC
Q 006570 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNS 312 (640)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~ 312 (640)
..+|.++.+|+.+.+..+..+ .....|.++++|+.+.+. +.++..-...|.++.+|+.+++..| ++..-..+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 456777788888888765443 455667778888888885 4565555667888888888888765 5545566788888
Q ss_pred CCceeeecc
Q 006570 313 LNRTVVSTW 321 (640)
Q Consensus 313 ~l~~l~l~~ 321 (640)
+|+.+.+..
T Consensus 335 ~L~~i~ip~ 343 (394)
T 4gt6_A 335 QLERIAIPS 343 (394)
T ss_dssp TCCEEEECT
T ss_pred CCCEEEECc
Confidence 888887753
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.39 E-value=4e-08 Score=92.05 Aligned_cols=121 Identities=19% Similarity=0.200 Sum_probs=80.8
Q ss_pred hhhhhcCCCCCcEeecccC-cCcCC----CCccccCCCCCCEEEcccCccccc----CCccccCCCCCCEEEccCccCCc
Q 006570 116 FFTILTKLSNLKVLSLVSL-GLWGP----LPSKINRFWSLEVLNISSNFIYGE----IPMEITSLKNLKSIVLADNLLNG 186 (640)
Q Consensus 116 ~~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 186 (640)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4556788889999999998 77432 345567778899999999988742 34445556788888888888875
Q ss_pred c-----CCCccCcCcCCeeEc--cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 187 S-----VPDLQRLVLLEELNL--GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 187 ~-----~~~~~~l~~L~~L~L--~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
. ...+...++|++|+| ++|.++..-.. .+...+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~-----------------~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEM-----------------EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH-----------------HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH-----------------HHHHHHHhCCCcCEEeccCCCCC
Confidence 3 223666677888888 66776432110 12233444567777777777764
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.36 E-value=5.9e-08 Score=90.85 Aligned_cols=109 Identities=20% Similarity=0.165 Sum_probs=83.6
Q ss_pred ccccccccCcc-CCCCh----hhhhhcCCCCCcEeecccCcCcCC----CCccccCCCCCCEEEcccCccccc----CCc
Q 006570 100 FSASQQSLSAN-FNIDR----FFTILTKLSNLKVLSLVSLGLWGP----LPSKINRFWSLEVLNISSNFIYGE----IPM 166 (640)
Q Consensus 100 ~~l~~l~l~~n-~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 166 (640)
+.++.|+|++| .+... +...+...+.|++|+|++|.+... +...+...++|++|+|++|.|... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46677777777 66543 455678889999999999998532 345566778999999999999854 566
Q ss_pred cccCCCCCCEEEc--cCccCCccC-----CCccCcCcCCeeEccCCCCC
Q 006570 167 EITSLKNLKSIVL--ADNLLNGSV-----PDLQRLVLLEELNLGGNDFG 208 (640)
Q Consensus 167 ~~~~l~~L~~L~L--~~N~l~~~~-----~~~~~l~~L~~L~L~~N~l~ 208 (640)
.+...++|++|+| ++|.|...- ..+...++|++|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 7788899999999 889997532 12566688999999998874
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.23 E-value=4.4e-05 Score=79.70 Aligned_cols=86 Identities=13% Similarity=0.070 Sum_probs=41.0
Q ss_pred CccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCC
Q 006570 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNS 312 (640)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~ 312 (640)
...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|..+.+|+.+++.++.++..-+.+|.++.
T Consensus 233 ~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 233 DGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp TTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT
T ss_pred cccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCC
Confidence 344455555555555443 33333344445555555555332 3333333445555555555555555444444455555
Q ss_pred CCceeeec
Q 006570 313 LNRTVVST 320 (640)
Q Consensus 313 ~l~~l~l~ 320 (640)
+|+.+.+.
T Consensus 311 ~L~~i~lp 318 (379)
T 4h09_A 311 KLSSVTLP 318 (379)
T ss_dssp TCCEEECC
T ss_pred CCCEEEcC
Confidence 55555543
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=5.6e-06 Score=82.15 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=90.5
Q ss_pred ccccCCcc-ceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 458 LIGEGSQG-QLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 458 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
.+..|..| .||+.... ++..+.+|+-... ...++.+|.+.|+.+. +--+.++++++. ..+..++||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~--------~~~~~~lvm 99 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIR--------TPDDAWLLT 99 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEE--------ETTEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEE--------ECCeEEEEE
Confidence 45556655 58988754 4667899987633 3467888999988774 333667777764 234579999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccC-------------------------------------
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG------------------------------------- 577 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------- 577 (640)
|++++.++.+.... .......++.++++.|+-||.-
T Consensus 100 e~l~G~~~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 100 TAIPGKTAFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp ECCCSEEHHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred EeeCCccccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 99999887765432 1112233444444444444430
Q ss_pred ------------------CCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 578 ------------------VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 578 ------------------~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
..+.++|+|+.+.||++++++.+-|.||+.+...
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 1134799999999999998877789999998653
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=3.4e-06 Score=85.51 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=87.5
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCc---ccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR---HLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.++.|....||+. |..+++|+-.. ......+.+|.++|+.+.+. .+.+++.++. ......++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~-------~~~g~~~~ 90 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK-------RSDGNPFV 90 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE-------CTTSCEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc-------cCCCceEE
Confidence 355778888899987 56788887532 12346789999999998653 3455555543 12234689
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhccc------------------------------------
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT------------------------------------ 576 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~------------------------------------ 576 (640)
||||++|.++.+..-. .++..++..++.++++.|+.||+
T Consensus 91 v~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~ 165 (306)
T 3tdw_A 91 GYRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLD 165 (306)
T ss_dssp EEECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSC
T ss_pred EEeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999887653110 12222333333333333333332
Q ss_pred ---------------------CCCCCeeccCCCCCceeecC---CCc-eEEeCCCCCccc
Q 006570 577 ---------------------GVAPGIFGNNLKTENILLDK---ALT-AKLSGYNIPLPS 611 (640)
Q Consensus 577 ---------------------~~~~~iiHrDlk~~NILl~~---~~~-~kl~DfGla~~~ 611 (640)
...+.++|+|+++.||+++. ++. ..|.||+.+...
T Consensus 166 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 166 ESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred hhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 02256799999999999987 344 589999988654
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.3e-05 Score=83.01 Aligned_cols=82 Identities=6% Similarity=-0.021 Sum_probs=53.9
Q ss_pred Ccc-ccCCccceEEEEeC-------CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCC---cccceeeeEEEecccC
Q 006570 457 NLI-GEGSQGQLYKGFLT-------DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRH---RHLVSILGHCILTYQD 522 (640)
Q Consensus 457 ~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~ 522 (640)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+++++.+.. -.+.++++++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~--- 102 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG--- 102 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS---
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC---
Confidence 456 78888999998764 26678899875432 1123567888888888742 2466777765311
Q ss_pred CCCCCCeEEEEEEccCCCCHh
Q 006570 523 HPNTGSTVFLVLEHISNGSLR 543 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~ 543 (640)
......++||||++|.++.
T Consensus 103 --~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 103 --DVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TTTSSCEEEEECCCCBCCC
T ss_pred --CccCCceEEEEecCCCChh
Confidence 1113458999999987654
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00016 Score=75.40 Aligned_cols=218 Identities=11% Similarity=-0.031 Sum_probs=138.6
Q ss_pred CCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccc------------cCC
Q 006570 98 GKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG------------EIP 165 (640)
Q Consensus 98 ~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------------~~p 165 (640)
....|+.+.++.+.. ..-..+|.+. .|+.+.+..+ ++..-...|..+.+|+.+.+..+.... ...
T Consensus 111 ~~~~L~~i~lp~~~~-~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (379)
T 4h09_A 111 QGTDLDDFEFPGATT-EIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTIL 187 (379)
T ss_dssp TTCCCSEEECCTTCC-EECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEE
T ss_pred ccCCcccccCCCccc-cccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceeccccccee
Confidence 345677777776532 2222345544 5666665543 434445677888888888877654331 122
Q ss_pred ccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCC---CCcccccceeecccCcccccCCccccCCCCc
Q 006570 166 MEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKF---PSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242 (640)
Q Consensus 166 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L 242 (640)
..+.....+..+.+..+.-.-....+....+|+.+.+..+ +.... .....+|+.+.+..+ ++..-...|.++.+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l 265 (379)
T 4h09_A 188 ESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTAL 265 (379)
T ss_dssp EECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred ccccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehh
Confidence 2344555666665544433222223667777877777654 22111 122467777777665 555556778888888
Q ss_pred cEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccc
Q 006570 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
+.+.+..+ +.......|.++++|+.+.+.++.++.+-+..|.++.+|+.++|..+ ++..-..+|.++++|+.+.+..+
T Consensus 266 ~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 266 KTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 88888654 55455567888888999998888887766778888888999888765 55455667888888888877543
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=7.5e-05 Score=78.50 Aligned_cols=75 Identities=12% Similarity=0.097 Sum_probs=48.3
Q ss_pred CCccccCCccceEEEEeC-CCcEEEEEEeecccC-------CChHHHHHHHHHHhcCCC--cc-cceeeeEEEecccCCC
Q 006570 456 TNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-------HLPQSLMQHVELLSKLRH--RH-LVSILGHCILTYQDHP 524 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~g~~~~~~~~~~ 524 (640)
.+.+|.|.++.||+++.. +++.++||....... ...+.+..|.++++.+.. |. +.+++.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------- 106 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------- 106 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--------
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--------
Confidence 457899999999999754 467899998653211 234567889998887732 33 34555432
Q ss_pred CCCCeEEEEEEccCCC
Q 006570 525 NTGSTVFLVLEHISNG 540 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~G 540 (640)
....++||||+++.
T Consensus 107 --~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 107 --TEMAVTVMEDLSHL 120 (397)
T ss_dssp --TTTTEEEECCCTTS
T ss_pred --CCccEEEEEeCCCc
Confidence 11248999999763
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00014 Score=72.75 Aligned_cols=76 Identities=20% Similarity=0.149 Sum_probs=55.9
Q ss_pred CCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC---cccceeeeEEEecccCCCCCCCeEE
Q 006570 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH---RHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
..+.+|.|..+.||+.+..||+.|.+|+...........|..|.+.|+.+.- --+.+++++.. -+
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~------------~~ 86 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD------------RT 86 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET------------TE
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC------------ce
Confidence 3567899999999999999999999998765544445678899998888742 23445554321 37
Q ss_pred EEEEccCCCCH
Q 006570 532 LVLEHISNGSL 542 (640)
Q Consensus 532 lv~Ey~~~GsL 542 (640)
+||||++.+..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999987653
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.62 E-value=7.2e-05 Score=76.70 Aligned_cols=147 Identities=16% Similarity=0.174 Sum_probs=79.3
Q ss_pred CccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCc--ccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR--HLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
+.|+.|..+.||+....+| .+++|+... ..+++..|.++++.+... .+.+++... .+.......+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~--~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNK--KGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCT--TSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecC--CCCEEEEECCEEEEEE
Confidence 3455577889999987554 588998864 234455566666555311 233333210 0000000134578999
Q ss_pred EccCCCCHh--------------HHhhccCC----C-------CCCCHHHHH----------------------------
Q 006570 535 EHISNGSLR--------------DYLTDWKK----K-------DMLKWPQRM---------------------------- 561 (640)
Q Consensus 535 Ey~~~GsL~--------------~~l~~~~~----~-------~~l~~~~~~---------------------------- 561 (640)
||++|.++. ..+|.... . ..-.|....
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 11221100 0 012332211
Q ss_pred ---HHHHHHHHHhhhccc----------CCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 562 ---AIIIGATRGVQFLHT----------GVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 562 ---~i~~~ia~~L~yLH~----------~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
.+...+..++++|+. .....++|+|+++.||+++.++.+.|.||+.+..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011123345666652 0236899999999999998888899999998754
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.38 E-value=4.6e-05 Score=69.64 Aligned_cols=33 Identities=9% Similarity=0.065 Sum_probs=14.6
Q ss_pred ccccccCccCCCChhhhhhcCCCCCcEeecccC
Q 006570 102 ASQQSLSANFNIDRFFTILTKLSNLKVLSLVSL 134 (640)
Q Consensus 102 l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n 134 (640)
|+.|||+++.+++.--..+.++++|+.|+|++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 333344433333332333445555555555555
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.28 E-value=5.9e-05 Score=68.94 Aligned_cols=83 Identities=10% Similarity=0.073 Sum_probs=58.0
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCc-ccccCCccccCC----CCCCEEEccCcc-CCcc-CCCccCcCc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF-IYGEIPMEITSL----KNLKSIVLADNL-LNGS-VPDLQRLVL 196 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~-~~~~~~l~~ 196 (640)
-.|+.|||+++.++..--..+..+++|++|+|+++. |+..-=..++.+ ++|++|+|+++. ++.. +..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468889999888765433457788889999998885 664333345553 368888888874 6643 223667888
Q ss_pred CCeeEccCCC
Q 006570 197 LEELNLGGND 206 (640)
Q Consensus 197 L~~L~L~~N~ 206 (640)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888774
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0036 Score=63.49 Aligned_cols=166 Identities=10% Similarity=0.092 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHhcCCCC-----CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc--cce
Q 006570 439 RGFSLEEIEEATNNFDP-----TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVS 511 (640)
Q Consensus 439 ~~~~~~~l~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 511 (640)
...+.+++......|.. ...++ |....||+....+|+.+++|...... ...+.+..|.+++..+.... +.+
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34555666555554432 23466 77789999887777789999986332 24567778888887774222 344
Q ss_pred eeeEEEecccCCCCCCCeEEEEEEccCCCCHh-----HH---------hhcc-C-----CCCCCCHHHH-----------
Q 006570 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLR-----DY---------LTDW-K-----KKDMLKWPQR----------- 560 (640)
Q Consensus 512 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~-----~~---------l~~~-~-----~~~~l~~~~~----------- 560 (640)
++.. .+......++..+++|||++|.++. .+ +|.. . .....++...
T Consensus 87 ~~~~---~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (328)
T 1zyl_A 87 PVAF---NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDA 163 (328)
T ss_dssp CCCB---TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTC
T ss_pred eeec---CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhc
Confidence 4432 0100000133568899999875432 10 1110 0 0111222211
Q ss_pred -----------HHHHHHHHHHhhh-cccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 561 -----------MAIIIGATRGVQF-LHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 561 -----------~~i~~~ia~~L~y-LH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
...+..++..++- +.......++|+|+++.||+++ + .+.|.||+.+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 164 TLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp SSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 0111111122221 1111235789999999999999 4 8999999887643
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0022 Score=64.72 Aligned_cols=138 Identities=15% Similarity=0.126 Sum_probs=88.8
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC---CcccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR---HRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.|+.|.+..+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.++++++. .....++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~--------~~g~~~l 108 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN--------SQGHSFL 108 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE--------CSSEEEE
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee--------cCCceEE
Confidence 45689999999999986 4678888987643 3567889999888873 356778887764 2345799
Q ss_pred EEEccCCCCHhH-----------HhhccCC-C------------------CCCCHHHHH---HHH--HH-----------
Q 006570 533 VLEHISNGSLRD-----------YLTDWKK-K------------------DMLKWPQRM---AII--IG----------- 566 (640)
Q Consensus 533 v~Ey~~~GsL~~-----------~l~~~~~-~------------------~~l~~~~~~---~i~--~~----------- 566 (640)
||||+++..+.. -||.... . ..-+|.... ++. .+
T Consensus 109 vme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~ 188 (312)
T 3jr1_A 109 LLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGN 188 (312)
T ss_dssp EEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSC
T ss_pred EEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 999999876521 1222111 0 012454321 111 11
Q ss_pred ---HHHH-hhhcc-cCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 567 ---ATRG-VQFLH-TGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 567 ---ia~~-L~yLH-~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+... ...|. ....+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 189 ~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 189 IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 12332 12347899999999999999887 8899984
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0016 Score=66.03 Aligned_cols=166 Identities=11% Similarity=0.095 Sum_probs=89.4
Q ss_pred CCCHHHHHHHhcCCCCC-----CccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc--ccee
Q 006570 440 GFSLEEIEEATNNFDPT-----NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVSI 512 (640)
Q Consensus 440 ~~~~~~l~~~~~~~~~~-----~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l 512 (640)
.++.+++......|... +.|+.|....+|+....+| .+++|..... ...+++..|++++..+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 45667777777777653 3355677789999987655 6788988642 12345667888777663222 2333
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhH--------------HhhccC-C---C--CC---CCHHHHHHH------
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRD--------------YLTDWK-K---K--DM---LKWPQRMAI------ 563 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~--------------~l~~~~-~---~--~~---l~~~~~~~i------ 563 (640)
+... .+.......+..+++|||++|..+.. -+|... . . .. ..|.....-
T Consensus 83 ~~~~--~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 83 LPRK--DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CCBT--TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cCCC--CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 3210 00000001234689999998755321 112110 0 0 00 113221110
Q ss_pred ------HHHHHHHhhhccc----CCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 564 ------IIGATRGVQFLHT----GVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 564 ------~~~ia~~L~yLH~----~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
...+.+.++++++ .....++|+|+.+.||+++++..+.|.||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 0012233334331 1235799999999999999876668999998764
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.002 Score=68.13 Aligned_cols=31 Identities=6% Similarity=0.217 Sum_probs=27.8
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+.++|+|+++.||+++.++ +++.||+.+...
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 6899999999999998876 999999998754
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00084 Score=58.28 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=21.3
Q ss_pred CccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455666666666555555555666666666666655
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.001 Score=57.68 Aligned_cols=35 Identities=31% Similarity=0.469 Sum_probs=18.1
Q ss_pred CCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCC
Q 006570 173 NLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF 207 (640)
Q Consensus 173 ~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l 207 (640)
+|+.|+|++|+|+.++++ |..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455555555555554444 45555555555555543
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.013 Score=59.54 Aligned_cols=32 Identities=6% Similarity=0.031 Sum_probs=27.9
Q ss_pred CCeeccCCCCCceeecCC----CceEEeCCCCCccc
Q 006570 580 PGIFGNNLKTENILLDKA----LTAKLSGYNIPLPS 611 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~----~~~kl~DfGla~~~ 611 (640)
..++|+|+.+.||+++.+ ..+.|.||+.+...
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 689999999999999875 67899999988653
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.00039 Score=64.71 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=49.5
Q ss_pred cccCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCcc----CCccccCCCCCCEEeccCcc---Ccc-
Q 006570 235 GLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNL---LIG- 302 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~---l~~- 302 (640)
.+..-+.|+.|+|++|+|... +-+.+..-+.|+.|+|++|+|... +-..+..-+.|+.|+|++|. +..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 344445677777777777532 223333456677777777777532 22344455667777777552 221
Q ss_pred ---cCCCCccCCCCCceeeecccc
Q 006570 303 ---KLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 303 ---~~p~~~~~~~~l~~l~l~~N~ 323 (640)
.+...+...+.|+.++++.|.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHhCCCcCeEeccCCC
Confidence 122334455667777766554
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0003 Score=65.49 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=48.2
Q ss_pred hhhcCCCCCcEeecccC-cCcC----CCCccccCCCCCCEEEcccCcccccC----CccccCCCCCCEEEccCccCCccC
Q 006570 118 TILTKLSNLKVLSLVSL-GLWG----PLPSKINRFWSLEVLNISSNFIYGEI----PMEITSLKNLKSIVLADNLLNGSV 188 (640)
Q Consensus 118 ~~l~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~ 188 (640)
..+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|.|...- ...+..-+.|+.|+|+.|.|...-
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34566677888888775 6531 13344555667777777777776332 222334456666666666665321
Q ss_pred C-----CccCcCcCCeeEccC
Q 006570 189 P-----DLQRLVLLEELNLGG 204 (640)
Q Consensus 189 ~-----~~~~l~~L~~L~L~~ 204 (640)
- .+..-..|++|+|++
T Consensus 115 a~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHHHhhCCceeEEECCC
Confidence 1 133334455555554
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0071 Score=60.57 Aligned_cols=137 Identities=8% Similarity=-0.048 Sum_probs=73.3
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc-ceeeeEEEecccCCCCCCCeEEEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL-VSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
.+.|+.|....+|+. ..+++|+....... ..+..+|.++++.+....+ .++++++ .+.-++|+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~----------~~~~~~v~ 86 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD----------PATGVMVT 86 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC----------TTTCCEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE----------CCCCEEEE
Confidence 577888999999998 46888887643221 1223567777766642222 3555432 11237899
Q ss_pred Ecc-CCCCHhH--------H----------hhccCCC--CCCCHHH-HHHH---------------------HHHHHHHh
Q 006570 535 EHI-SNGSLRD--------Y----------LTDWKKK--DMLKWPQ-RMAI---------------------IIGATRGV 571 (640)
Q Consensus 535 Ey~-~~GsL~~--------~----------l~~~~~~--~~l~~~~-~~~i---------------------~~~ia~~L 571 (640)
||+ ++.++.. . +|..... ....... ...+ +..+...+
T Consensus 87 e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 87 RYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp ECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred eecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 999 5544421 0 1111100 0011111 1111 11111111
Q ss_pred hhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 572 ~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
.-. .....++|+|+.+.||+ ..++.+.+.||..+...
T Consensus 167 ~~~--~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 167 AAH--PLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp HSS--CCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred Hhc--CCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 111 12356899999999999 56677899999987643
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0098 Score=62.89 Aligned_cols=73 Identities=19% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCccccCCccceEEEEeCC--------CcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc-ceeeeEEEecccCCCCC
Q 006570 456 TNLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL-VSILGHCILTYQDHPNT 526 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~~~~ 526 (640)
.+.|+.|....+|+...++ +..+.+|+.... ...+.+.+|..+++.+...++ .++++.+. .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--------~ 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--------G 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--------T
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--------C
Confidence 3557778889999998653 478999987421 222566789988888743333 56665431 1
Q ss_pred CCeEEEEEEccCCCCH
Q 006570 527 GSTVFLVLEHISNGSL 542 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL 542 (640)
.+||||+++.++
T Consensus 148 ----g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 ----GRLEEYIPSRPL 159 (429)
T ss_dssp ----EEEECCCCEEEC
T ss_pred ----CEEEEEeCCccc
Confidence 389999986443
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.02 Score=60.98 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=45.7
Q ss_pred CccccCCccceEEEEeCC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc-ceeeeEEEecccCCCCCCCeEEEEE
Q 006570 457 NLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL-VSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
+.|+.|-...+|+....+ +..+++|+........ -+..+|..++..+...++ .++++++- . .+||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--------~----G~v~ 180 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--------N----GRIE 180 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--------T----EEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--------C----eEEE
Confidence 567778888999998765 4788898875332211 122578888888864444 46665541 1 3599
Q ss_pred EccCCCCH
Q 006570 535 EHISNGSL 542 (640)
Q Consensus 535 Ey~~~GsL 542 (640)
||+++.++
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99987444
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.035 Score=57.44 Aligned_cols=141 Identities=12% Similarity=0.058 Sum_probs=81.5
Q ss_pred CccccCCccceEEEEeC--------CCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.+..|-...+|+.... +++.+.+|+.... ......+.+|.++++.+. +.-..++++++- .
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--------~- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--------E- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--------T-
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--------C-
Confidence 45666778899999864 2478999986432 224567778999888774 322356665541 1
Q ss_pred CeEEEEEEccCCCCHhHH-----------------hhccCC--CCCCC--HHHHHHHHHHHHH-----------------
Q 006570 528 STVFLVLEHISNGSLRDY-----------------LTDWKK--KDMLK--WPQRMAIIIGATR----------------- 569 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~-----------------l~~~~~--~~~l~--~~~~~~i~~~ia~----------------- 569 (640)
.+||||++|.++..- +|.... ..... |.++.++..++..
T Consensus 126 ---g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 202 (379)
T 3feg_A 126 ---GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL 202 (379)
T ss_dssp ---EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred ---ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence 389999997554311 111100 11122 3444444443322
Q ss_pred --Hhhh----ccc-CCCCCeeccCCCCCceeecCC----CceEEeCCCCCcc
Q 006570 570 --GVQF----LHT-GVAPGIFGNNLKTENILLDKA----LTAKLSGYNIPLP 610 (640)
Q Consensus 570 --~L~y----LH~-~~~~~iiHrDlk~~NILl~~~----~~~kl~DfGla~~ 610 (640)
.+.+ |.. .....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1222 211 123578999999999999876 7899999998864
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0092 Score=61.70 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=42.5
Q ss_pred CccccCCccceEEEEeCC---------CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc-cceeeeEEEecccCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTD---------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH-LVSILGHCILTYQDHPNT 526 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~~~~ 526 (640)
+.++.|....+|+....+ +..+++|+....... ..+...|.++++.+...+ +.++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~---------~ 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF---------N 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec---------C
Confidence 456778888999998654 268888887543211 112467787777774333 34555432 0
Q ss_pred CCeEEEEEEccCCCCH
Q 006570 527 GSTVFLVLEHISNGSL 542 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL 542 (640)
-++||||+++.++
T Consensus 109 ---~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 ---GGRIEEWLYGDPL 121 (369)
T ss_dssp ---TEEEEECCCSEEC
T ss_pred ---CcEEEEEecCCcC
Confidence 2789999987543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.026 Score=57.57 Aligned_cols=32 Identities=9% Similarity=0.250 Sum_probs=28.1
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
..++|+|+.+.||++++++.+.|.||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 57999999999999998888999999877543
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=92.26 E-value=0.35 Score=50.63 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=46.1
Q ss_pred CccccCCccceEEEEeCC--------CcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.+..|-...+|+....+ +..+++|+....... .-+..+|.++++.+. +.-..++++.+ .
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~---------~- 144 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF---------P- 144 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE---------T-
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc---------C-
Confidence 456667788999998753 578999986543221 123457787777774 22234555432 1
Q ss_pred CeEEEEEEccCCCCH
Q 006570 528 STVFLVLEHISNGSL 542 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL 542 (640)
-++||||++|.+|
T Consensus 145 --~~~I~efI~G~~l 157 (424)
T 3mes_A 145 --EGRIEEFIDGEPL 157 (424)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CCEEEEEeCCccC
Confidence 2789999998654
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.57 E-value=0.15 Score=34.24 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=10.4
Q ss_pred eeEeeeehhhhhhhhhheeeeeecccc
Q 006570 367 LGIIGGVVGFVVVFGLLVLVVIRRSKT 393 (640)
Q Consensus 367 i~ii~~~~~~v~l~~~i~~~~~rr~~~ 393 (640)
.++++|+++++ ++++.+++++||++.
T Consensus 15 ~gVVgGv~~~~-ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 15 TGMVGALLLLL-VVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHTTTC
T ss_pred eehhHHHHHHH-HHHHHHHHHhhhhHh
Confidence 34444433333 333344444444443
|
| >2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A | Back alignment and structure |
|---|
Probab=80.88 E-value=0.083 Score=34.32 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=16.7
Q ss_pred ccceeeeEeeeehhhhhhhhhheeeeeec
Q 006570 362 DVGLILGIIGGVVGFVVVFGLLVLVVIRR 390 (640)
Q Consensus 362 ~~~~ii~ii~~~~~~v~l~~~i~~~~~rr 390 (640)
+.+.+.++++++++.+++++.++++++||
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 44556667666666555555555555444
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=80.74 E-value=0.33 Score=51.60 Aligned_cols=64 Identities=13% Similarity=0.029 Sum_probs=20.2
Q ss_pred CCCccccCCccceEEEEeCC-CcEEEE------EEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 455 PTNLIGEGSQGQLYKGFLTD-GSRVSV------KCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
..+.+| ||.||+|.+.. ..+||| |..+... ......+.+|..+++..+|||+++.+++....+.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~~~~ 218 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFR 218 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEECCS
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEeecC
Confidence 345666 99999999754 357888 7665322 2223568889999999999999999998765443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 640 | ||||
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-25 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-25 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-25 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-24 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-24 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-24 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 5e-24 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-23 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-23 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 7e-23 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-22 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-22 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-22 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-21 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-21 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 6e-21 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-21 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-20 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-20 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-20 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-20 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-20 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-19 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-19 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-19 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-19 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-19 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-19 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-19 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-19 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 8e-19 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-18 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-18 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-18 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-17 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-17 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-17 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 4e-17 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 5e-17 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 9e-17 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-16 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-16 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-16 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-15 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-15 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 3e-15 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-15 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-14 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-14 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-14 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-14 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 8e-14 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-13 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-08 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-13 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-13 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-12 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-12 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-12 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 6e-12 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-11 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-11 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 5e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 5e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 7e-10 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-08 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-08 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-05 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 6e-05 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 0.001 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 7e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 3e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-05 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 6e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.003 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.003 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.004 |
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 2e-25
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 436 PPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM 495
P +G + + E + +G+G G+++ G +RV++K LK P++ +
Sbjct: 2 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFL 60
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
Q +++ KLRH LV + + +++V E++S GSL D+L K +
Sbjct: 61 QEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLLDFLKGETGKYL- 110
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ PQ + + G+ ++ +L+ NIL+ + L K++ + +
Sbjct: 111 RLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGL 159
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 3e-25
Identities = 27/157 (17%), Positives = 62/157 (39%), Gaps = 14/157 (8%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+ +G G G + G V++K +K + ++ +++ L H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G C +F++ E+++NG L +YL + + + Q + +
Sbjct: 63 QLYGVCT--------KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEA 112
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+++L + +L N L++ K+S + +
Sbjct: 113 MEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGL 146
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 4e-25
Identities = 32/157 (20%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ T ++++ E++ NGSL D+L L + + + G
Sbjct: 72 RLYAVV---------TQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEG 121
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ F+ +L+ NIL+ L+ K++ + +
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGL 155
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (254), Expect = 1e-24
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 18/162 (11%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELL 501
++ E IG GS G +YKG V+VK L + Q+ V +L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
K RH +++ +G+ T + +V + SL +L + K + + +
Sbjct: 59 RKTRHVNILLFMGYS---------TAPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLI 107
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
I +G+ +LH I +LK+ NI L + LT K+
Sbjct: 108 DIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIG 146
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 1e-24
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+LG + +++V E+++ GSL DYL + + +L + +
Sbjct: 64 QLLGVIV-------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEA 115
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
+++L +L N+L+ + AK
Sbjct: 116 MEYLE---GNNFVHRDLAARNVLVSEDNVAK 143
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 3e-24
Identities = 30/160 (18%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 446 IEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH-LPQSLMQHVELLSK 503
+E ++F+ + +G G+ G ++K G ++ K + L+ + + +++ +++L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
++V G + + + +EH+ GSL L KK + +
Sbjct: 61 CNSPYIVGFYGAFY--------SDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKV 109
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
I +G+ +L I ++K NIL++ KL
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLC 147
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.8 bits (248), Expect = 5e-24
Identities = 28/158 (17%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+ IG G G ++ G+ + +V++K ++ + + ++ E++ KL H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ G C+ + + LV E + +G L DY ++ + + + + G
Sbjct: 64 QLYGVCL--------EQAPICLVFEFMEHGCLSDY--LRTQRGLFAAETLLGMCLDVCEG 113
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608
+ + +L N L+ + K+S + +
Sbjct: 114 ---MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 148
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 99.4 bits (247), Expect = 1e-23
Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 27/181 (14%)
Query: 441 FSLEEIEEATNNFDPT---------NLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQRH 489
F+ E+ EA F +IG G G++ G L + V LK +
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 490 LPQ---SLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ + ++ + H +++ + G + V ++ E + NGSL +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVT--------KSTPVMIITEFMENGSLDSF- 117
Query: 547 TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
+ Q + ++ G G+++L +L NIL++ L K+S +
Sbjct: 118 -LRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173
Query: 607 I 607
+
Sbjct: 174 L 174
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 98.3 bits (244), Expect = 2e-23
Identities = 29/165 (17%), Positives = 70/165 (42%), Gaps = 14/165 (8%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSLMQHVEL 500
+ ++ E + + +G G G++Y+G S V+VK LK + + ++ +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 66
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
+ +++H +LV +LG C +++ E ++ G+L DYL + +
Sbjct: 67 MKEIKHPNLVQLLGVCT--------REPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVL 117
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
+ + + +++L +L N L+ + K++ +
Sbjct: 118 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADF 159
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.0 bits (241), Expect = 7e-23
Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 20/164 (12%)
Query: 447 EEATNNFDPT------NLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVE 499
E T + +P +G+G+ G++YK + + K + K + M ++
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 61
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L+ H ++V +L + +++++E + G++ + + + L Q
Sbjct: 62 ILASCDHPNIVKLLDAFY--------YENNLWILIEFCAGGAVDAVM--LELERPLTESQ 111
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ + +LH I +LK NIL KL+
Sbjct: 112 IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 152
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 96.6 bits (240), Expect = 1e-22
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 21/167 (12%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLP---QSLMQ 496
F ++ E+ F IG GS G +Y + + V++K + + Q +++
Sbjct: 8 FFKDDPEK---LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 497 HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
V L KLRH + + G + T +LV+E+ + K L+
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYL--------REHTAWLVMEYCLGSASDLLE---VHKKPLQ 113
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ A+ GA +G+ +LH + + ++K NILL + KL
Sbjct: 114 EVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLG 157
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.1 bits (236), Expect = 2e-22
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 12/158 (7%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRH 508
+++ IG GS G+ K +DG + K L Q L+ V LL +L+H +
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD-WKKKDMLKWPQRMAIIIGA 567
+V I T +T+++V+E+ G L +T K++ L + ++
Sbjct: 65 IVRYYDRII------DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 118
Query: 568 TRGVQFLH--TGVAPGIFGNNLKTENILLDKALTAKLS 603
T ++ H + + +LK N+ LD KL
Sbjct: 119 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 156
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.9 bits (235), Expect = 5e-22
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVEL--LSKLRHRHLVSILGHC 516
IG+G G++++G G V+VK ++ +S + E+ LRH +++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
T + ++LV ++ +GSL DYL + + + + + G+ LH
Sbjct: 67 ----NKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHM 118
Query: 577 GVA-----PGIFGNNLKTENILLDKALTAKLS 603
+ P I +LK++NIL+ K T ++
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.5 bits (232), Expect = 1e-21
Identities = 35/192 (18%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 443 LEEIEEATNNFDPT------NLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLM 495
LE++ + DP IG+G+ G +Y + G V+++ + L+Q+ + ++
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+ ++ + ++ ++V+ L + G +++V+E+++ GSL D +T+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYL--------VGDELWVVMEYLAGGSLTDVVTETCM---- 113
Query: 556 KWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN 615
Q A+ + ++FLH + + ++K++NILL + KL+ +
Sbjct: 114 DEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 616 TLSFHTDRSSLY 627
+ + +
Sbjct: 171 SKRSTMVGTPYW 182
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.3 bits (229), Expect = 2e-21
Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 439 RGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLK---LKQRHLPQSL 494
R ++LE +F+ +G+G G +Y +++K L L++ + L
Sbjct: 1 RQWALE-------DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 53
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
+ VE+ S LRH +++ + G+ + V+L+LE+ G++ L K
Sbjct: 54 RREVEIQSHLRHPNILRLYGYFH--------DATRVYLILEYAPLGTVYRELQKLSK--- 102
Query: 555 LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+ I + + H+ + ++K EN+LL A K++
Sbjct: 103 FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIA 148
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 92.4 bits (229), Expect = 6e-21
Identities = 26/172 (15%), Positives = 69/172 (40%), Gaps = 14/172 (8%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+++D +G G+ G +++ G+ + K + +++ + ++ +S LRH L
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V++ + + ++ E +S G L + + + + + + + + +
Sbjct: 86 VNLHDAFE--------DDNEMVMIYEFMSGGELFEKV--ADEHNKMSEDEAVEYMRQVCK 135
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFHT 621
G+ +H +LK ENI+ + +L + L + + S
Sbjct: 136 GLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 91.4 bits (226), Expect = 7e-21
Identities = 34/192 (17%), Positives = 73/192 (38%), Gaps = 39/192 (20%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLK-QRHLPQSL 494
L +E NN + IGEG+ G++++ + V+VK LK + +
Sbjct: 4 KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
+ L+++ + ++V +LG C G + L+ E+++ G L ++L +
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCA--------VGKPMCLLFEYMAYGDLNEFLRSMSPHTV 115
Query: 555 ---------------------LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
L +++ I G+ +L +L T N L
Sbjct: 116 CSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCL 172
Query: 594 LDKALTAKLSGY 605
+ + + K++ +
Sbjct: 173 VGENMVVKIADF 184
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.5 bits (224), Expect = 1e-20
Identities = 29/165 (17%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 444 EEIEEATNNFDPTNL-IGEGSQGQLYKGFLTDGSR---VSVKCLKLK-QRHLPQSLMQHV 498
+++ +N ++ +G G+ G + +G + V++K LK ++ + +M+
Sbjct: 1 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+++ +L + ++V ++G C + LV+E G L +L +++ +
Sbjct: 61 QIMHQLDNPYIVRLIGVC---------QAEALMLVMEMAGGGPLHKFLVGKREE--IPVS 109
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
++ + G+++L +L N+LL AK+S
Sbjct: 110 NVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKIS 151
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.0 bits (225), Expect = 1e-20
Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 19/186 (10%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR----VSVKCL-KLKQRHLPQSLMQHVE 499
+F+ +IG G G +Y G L D +VK L ++ +
Sbjct: 23 GPSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 80
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
++ H +++S+LG C+ + + +VL ++ +G LR++ +
Sbjct: 81 IMKDFSHPNVLSLLGICL-------RSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKD 131
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSF 619
+ + +G++FL + +L N +LD+ T K++ + + + S
Sbjct: 132 LIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 188
Query: 620 HTDRSS 625
H +
Sbjct: 189 HNKTGA 194
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.8 bits (222), Expect = 1e-20
Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 21/168 (12%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR----VSVKCLK-LKQRHLPQSLMQHVE 499
EI+ + IGEG G +++G V++K K + + +Q
Sbjct: 3 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+ + H H+V ++G T + V++++E + G LR + +K L
Sbjct: 61 TMRQFDHPHIVKLIGVI---------TENPVWIIMELCTLGELRSF--LQVRKYSLDLAS 109
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ + + +L + ++ N+L+ KL + +
Sbjct: 110 LILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGL 154
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 2e-20
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRH 508
++D +GEG+ G++ V+VK + +K+ P+++ + + + L H +
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V GH G+ +L LE+ S G L D + + + P
Sbjct: 65 VVKFYGHRR--------EGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLM 113
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH GI ++K EN+LLD+ K+S + +
Sbjct: 114 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGL 149
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 87.8 bits (217), Expect = 7e-20
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 25/167 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ---------RHLPQSLMQHVELL 501
N++P ++G G + + +VK + + + L ++ ++ V++L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 502 SKLR-HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
K+ H +++ + T + FLV + + G L DYL +K L +
Sbjct: 64 RKVSGHPNIIQLKDTYE--------TNTFFFLVFDLMKKGELFDYL---TEKVTLSEKET 112
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I+ + LH I +LK ENILLD + KL+ +
Sbjct: 113 RKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 156
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 89.0 bits (220), Expect = 1e-19
Identities = 32/164 (19%), Positives = 60/164 (36%), Gaps = 21/164 (12%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLK------QRHLPQSLMQHVELLSK 503
N+F +IG G G++Y D G ++KCL K L + + L+S
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
+V + T + +L+ ++ G L +L + +
Sbjct: 64 GDCPFIVCMSYAFH--------TPDKLSFILDLMNGGDLHYHL---SQHGVFSEADMRFY 112
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G++ +H + +LK NILLD+ ++S +
Sbjct: 113 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 153
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.4 bits (216), Expect = 1e-19
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 459 IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGH 515
IG GS +YKG T+ V+ L+ ++ + Q + E+L L+H ++V
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ + LV E +++G+L+ YL K+ ++K + +G+QFLH
Sbjct: 77 W----ESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLH 129
Query: 576 TGVAPGIFGNNLKTENILL-DKALTAKLS 603
T P I +LK +NI + + K+
Sbjct: 130 TR-TPPIIHRDLKCDNIFITGPTGSVKIG 157
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.8 bits (214), Expect = 2e-19
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 21/170 (12%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-----VSVKCLKLKQRH-LPQSLMQHV 498
EI + +IG G G++YKG L S V++K LK +
Sbjct: 3 EIH--PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
++ + H +++ + G + + ++ E++ NG+L + +K
Sbjct: 61 GIMGQFSHHNIIRLEGVI--------SKYKPMMIITEYMENGALDKF--LREKDGEFSVL 110
Query: 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608
Q + ++ G G+++L +L NIL++ L K+S + +
Sbjct: 111 QLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLS 157
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.0 bits (212), Expect = 3e-19
Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 21/158 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLK---LKQRHLPQSLMQHVELLSK 503
+ +G+GS G + +G V+VKCLK L Q ++ V +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
L HR+L+ + G + +V E GSL D K +
Sbjct: 68 LDHRNLIRLYGVV---------LTPPMKMVTELAPLGSLLDR--LRKHQGHFLLGTLSRY 116
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
+ G+ +L + +L N+LL K
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVK 151
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 86.0 bits (212), Expect = 3e-19
Identities = 26/158 (16%), Positives = 63/158 (39%), Gaps = 14/158 (8%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLR 505
++ ++ ++G G +++ L V+VK L+ + + + + L
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H +V++ + G ++V+E++ +LRD + + + + +I
Sbjct: 66 HPAIVAVYDTG----EAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIA 118
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
A + + F H GI ++K NI++ K+
Sbjct: 119 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVM 153
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.9 bits (212), Expect = 4e-19
Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVS 511
+G G+ G + KG+ V+VK LK + L L+ ++ +L + ++V
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
++G C + LV+E G L YL + +K + ++ + G+
Sbjct: 73 MIGIC---------EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGM 120
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++L +L N+LL AK+S + +
Sbjct: 121 KYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL 153
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.8 bits (212), Expect = 4e-19
Identities = 28/158 (17%), Positives = 60/158 (37%), Gaps = 18/158 (11%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLRHR 507
+F ++GEGS + L ++K L+ + + + + + +++S+L H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
V + ++ L + NG L Y+
Sbjct: 69 FFVKLYFTFQ--------DDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEI 117
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
+++LH GI +LK ENILL++ + +++ +
Sbjct: 118 VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDF 152
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 87.0 bits (215), Expect = 5e-19
Identities = 24/154 (15%), Positives = 60/154 (38%), Gaps = 14/154 (9%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+ +D +G G+ G +++ G K + ++ + ++++L H L
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+++ + L+LE +S G L D + + + + + + A
Sbjct: 89 INLHDAFE--------DKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINYMRQACE 138
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
G++ +H I ++K ENI+ + + +
Sbjct: 139 GLKHMH---EHSIVHLDIKPENIMCETKKASSVK 169
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.6 bits (211), Expect = 8e-19
Identities = 34/181 (18%), Positives = 72/181 (39%), Gaps = 39/181 (21%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSR------VSVKCLKLK-QRHLPQSLMQHVELLSK 503
N + ++G G+ G++ S+ V+VK LK K ++LM ++++++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96
Query: 504 L-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK---------- 552
L H ++V++LG C ++L+ E+ G L +YL ++K
Sbjct: 97 LGSHENIVNLLGACT--------LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 148
Query: 553 ----------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
++L + + +G++FL +L N+L+ K+
Sbjct: 149 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKI 205
Query: 603 S 603
Sbjct: 206 C 206
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.5 bits (208), Expect = 1e-18
Identities = 32/198 (16%), Positives = 72/198 (36%), Gaps = 32/198 (16%)
Query: 425 PQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRV 478
P+ +A + +P +E E A + +G+GS G +Y+G +RV
Sbjct: 1 PEYFSAADVYVP-------DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV 53
Query: 479 SVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHI 537
++K + + ++ + H+V +LG G +++E +
Sbjct: 54 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--------QGQPTLVIMELM 105
Query: 538 SNGSLRDYLTDWKKK-------DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590
+ G L+ YL + + + + G+ +L+ A +L
Sbjct: 106 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAAR 162
Query: 591 NILLDKALTAKLSGYNIP 608
N ++ + T K+ + +
Sbjct: 163 NCMVAEDFTVKIGDFGMT 180
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.7 bits (206), Expect = 3e-18
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 29/171 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKL-R 505
N+ ++IGEG+ GQ+ K + DG R+ ++K+ +E+L KL
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL-------------TDWKKK 552
H +++++LG C ++L +E+ +G+L D+L
Sbjct: 70 HPNIINLLGACE--------HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 121
Query: 553 DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
L Q + RG+ +L +L NIL+ + AK++
Sbjct: 122 STLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIA 169
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.3 bits (205), Expect = 5e-18
Identities = 34/176 (19%), Positives = 63/176 (35%), Gaps = 34/176 (19%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSK 503
N +G G+ G++ + V+VK LK ++LM +++LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 504 L-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-------- 554
L H ++V++LG C G ++ E+ G L ++L + +
Sbjct: 83 LGNHMNIVNLLGACT--------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 134
Query: 555 -------LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
L ++ +G+ FL + +L NILL K+
Sbjct: 135 MEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKIC 187
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.5 bits (203), Expect = 1e-17
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 452 NFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
++ T +IG GS G +Y+ L D G V++K + +R + ++++ KL H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIV 76
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+ + + + LVL+++ R + K L + R
Sbjct: 77 RLRYFFYSSGEKKDEV--YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDK 596
+ ++H + GI ++K +N+LLD
Sbjct: 135 LAYIH---SFGICHRDIKPQNLLLDP 157
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 81.2 bits (200), Expect = 2e-17
Identities = 27/166 (16%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 444 EEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ-RHLPQSLMQHVELL 501
++ E+ + +D +++G G+ ++ V++KC+ K S+ + +L
Sbjct: 2 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
K++H ++V++ +G ++L+++ +S G L D + +K
Sbjct: 62 HKIKHPNIVALDDIYE--------SGGHLYLIMQLVSGGELFDRI---VEKGFYTERDAS 110
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+I V++LH LD+ +S + +
Sbjct: 111 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 156
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.9 bits (199), Expect = 4e-17
Identities = 27/141 (19%), Positives = 58/141 (41%), Gaps = 15/141 (10%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGH 515
++G G G++ + F + ++K L+ + + VEL + + H+V I+
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVD- 72
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
Y++ + +V+E + G L + D + + I+ +Q+LH
Sbjct: 73 ---VYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 128
Query: 576 TGVAPGIFGNNLKTENILLDK 596
+ I ++K EN+L
Sbjct: 129 ---SINIAHRDVKPENLLYTS 146
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.3 bits (197), Expect = 4e-17
Identities = 34/177 (19%), Positives = 62/177 (35%), Gaps = 29/177 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF------LTDGSRVSVKCLKLKQRHLP-QSLMQHVELLSK 503
+ +G G+ GQ+ + V+VK LK H ++LM +++L
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK------------ 551
+ H V L G + +++E G+L YL +
Sbjct: 73 IGHHLNVVNLLGACTK------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 126
Query: 552 -KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
KD L + +G++FL + +L NILL + K+ + +
Sbjct: 127 YKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGL 180
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.6 bits (198), Expect = 5e-17
Identities = 27/162 (16%), Positives = 65/162 (40%), Gaps = 13/162 (8%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL-KLKQRHLPQSLMQHVELLSKLR 505
+ + + IGEG+ G + + + RV++K + + + Q ++ +++L + R
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H +++ I + ++ H+ L L K L +
Sbjct: 65 HENIIGINDIIRAPTIEQMKD----VYLVTHLMGADLYKLL----KTQHLSNDHICYFLY 116
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
RG++++H+ + +LK N+LL+ K+ + +
Sbjct: 117 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 155
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.6 bits (195), Expect = 9e-17
Identities = 25/156 (16%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHR 507
+ ++ IG+G+ G+++K G +V++K + ++ + P + ++ +++L L+H
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V+++ C + +++LV + + K + + + M +++
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
L+ I ++K N+L+ + KL+
Sbjct: 130 ------LYYIHRNKILHRDMKAANVLITRDGVLKLA 159
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.1 bits (194), Expect = 1e-16
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 453 FDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL--KLKQRHLPQS---LMQHVELLSKLRH 506
F ++G G+ G +YKG + +G +V + +L++ P++ ++ +++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
H+ +LG C+ STV L+ + + G L DY + KD + + +
Sbjct: 71 PHVCRLLGICL---------TSTVQLITQLMPFGCLLDY--VREHKDNIGSQYLLNWCVQ 119
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ +L + +L N+L+ K+
Sbjct: 120 IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKI 152
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.4 bits (192), Expect = 2e-16
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL 504
A ++ IGEG+ G+++K G V++K ++++ + +P S ++ V +L L
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 505 ---RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
H ++V + C ++ D + LV EH+ D + +
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRET---KLTLVFEHVDQDLTT--YLDKVPEPGVPTETIK 119
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
++ RG+ FLH+ + +LK +NIL+ + K
Sbjct: 120 DMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIK 156
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.2 bits (192), Expect = 3e-16
Identities = 23/157 (14%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR 505
+E + +G G G +++ + K +K+K + + + +L+ R
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR 59
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
HR+++ + + + ++ E IS + + + L + ++ +
Sbjct: 60 HRNILHLHESFE--------SMEELVMIFEFISGLDIFERIN--TSAFELNEREIVSYVH 109
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+QFLH + I +++ ENI+ ++ +
Sbjct: 110 QVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTI 143
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.7 bits (185), Expect = 1e-15
Identities = 31/180 (17%), Positives = 74/180 (41%), Gaps = 34/180 (18%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQ-RHLPQSLMQHVELL 501
+ +GEG+ GQ+ ++V+VK LK L+ +E++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 502 SKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM------ 554
+ +H++++++LG C +++++E+ S G+LR+YL + +
Sbjct: 73 KMIGKHKNIINLLGACT--------QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 124
Query: 555 -------LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
L ++ RG+++L + +L N+L+ + K++ + +
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGL 181
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.3 bits (184), Expect = 2e-15
Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 457 NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+ +GEG +YK V++K +KL R + ++ ++ ++LL +L H +++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
+L S + LV + + +L A ++ +G
Sbjct: 64 GLLDAFG--------HKSNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYMLMTLQG 112
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
+++LH I +LK N+LLD+ KL+
Sbjct: 113 LEYLH---QHWILHRDLKPNNLLLDENGVLKLA 142
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.2 bits (184), Expect = 3e-15
Identities = 31/170 (18%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 439 RGFSLEEIEEAT----NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--LKQRHLP 491
GF +E+ + + +G G+ G + G++V++K L +
Sbjct: 2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 61
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + LL +RH +++ +L T + + + +LV+ + G+ L K
Sbjct: 62 KRAYRELRLLKHMRHENVIGLLDVF--TPDETLDDFTDFYLVMPFM--GTDLGKL---MK 114
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
+ L + ++ +G++++H A GI +LK N+ +++ K
Sbjct: 115 HEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELK 161
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.7 bits (183), Expect = 3e-15
Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 18/160 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLRH 506
+F +G GS G+++ +G ++K LK + + + +LS + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++ + G +F+++++I G L L ++ A +
Sbjct: 64 PFIIRMWGTFQ--------DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC- 114
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
L + I +LK ENILLDK K++ +
Sbjct: 115 -----LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG 149
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 73.0 bits (178), Expect = 1e-14
Identities = 28/155 (18%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRH 508
+ IGEG+ G +YK G ++K ++L++ +P + ++ + +L +L+H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V + +T + LV EH+ + + L+ + ++
Sbjct: 62 IVKLYDVI--------HTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLL 110
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+ + H + +LK +N+L+++ K++
Sbjct: 111 NGIAYCH---DRRVLHRDLKPQNLLINREGELKIA 142
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.2 bits (179), Expect = 1e-14
Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 19/158 (12%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLK----LKQRHLPQSLMQHVELLSKLR 505
+F ++G+GS G+++ ++K LK L + ++++ L
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H L + T +F V+E+++ G L ++ + +
Sbjct: 62 HPFLTHMFCTFQ--------TKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAA 110
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
G+QFLH+ GI +LK +NILLDK K++
Sbjct: 111 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIA 145
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.7 bits (175), Expect = 3e-14
Identities = 32/163 (19%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK------QRHLPQS 493
F E ++ + +D +G G + K + G + + K +K + + +
Sbjct: 3 FRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD 553
+ + V +L +++H +++++ + V L+LE ++ G L D+ +K+
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYE--------NKTDVILILELVAGGELFDF---LAEKE 108
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
L + + GV +LH+ I +LK ENI+L
Sbjct: 109 SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 148
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.7 bits (175), Expect = 3e-14
Identities = 29/161 (18%), Positives = 66/161 (40%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLRH 506
N+FD L+G+G+ G++ G ++K L+ + + + +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
L ++ T + V+E+ + G L +L ++ + +
Sbjct: 65 PFLTALKYAFQ--------THDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAE 113
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+++LH+ + ++K EN++LDK K++ + +
Sbjct: 114 IVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGL 151
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.3 bits (171), Expect = 8e-14
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRH 508
NF IGEG+ G +YK G V++K ++L +P + ++ + LL +L H +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
+V D +T + ++LV E + + + P + +
Sbjct: 63 IV--------KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLL 112
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H + + +LK +N+L++ KL+ + +
Sbjct: 113 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGL 148
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 69.4 bits (168), Expect = 2e-13
Identities = 61/305 (20%), Positives = 122/305 (40%), Gaps = 12/305 (3%)
Query: 31 PSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNS----RVTELTVIGNK 86
P + + L Q++K L P L W T+ C + + L ++C RV L + G
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC---NRTWLGVLCDTDTQTYRVNNLDLSGLN 61
Query: 87 SSPAHSPKPTFGKFSA-SQQSLSANFNI-DRFFTILTKLSNLKVLSLVSLGLWGPLPSKI 144
+ + + + N+ + KL+ L L + + G +P +
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNL 202
++ +L L+ S N + G +P I+SL NL I N ++G++PD L + +
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 203 GGNDFGP-KFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261
N P+ + ++ + + ++ S L D+ Q + N + +
Sbjct: 182 SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG 241
Query: 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321
++ L+L N++ LP ++ L+ + +S N L G++P + + +
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
Query: 322 NCLSG 326
CL G
Sbjct: 302 KCLCG 306
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 54.8 bits (130), Expect = 1e-08
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 137 WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVL 196
K+ +L L++ +N IYG +P +T LK L S+ ++ N L G +P L
Sbjct: 233 LAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQR 292
Query: 197 LEELNLGGNDF--GPKFPSLS 215
+ N G P+ +
Sbjct: 293 FDVSAYANNKCLCGSPLPACT 313
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 69.1 bits (168), Expect = 2e-13
Identities = 24/147 (16%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRH 508
+++ +G G ++++ +T+ +V VK LK ++ + + + +++L LR +
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPN 91
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
++++ T LV EH++N + L +
Sbjct: 92 IITLADIV------KDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEIL 139
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLD 595
+ + + H+ GI ++K N+++D
Sbjct: 140 KALDYCHS---MGIMHRDVKPHNVMID 163
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.4 bits (166), Expect = 5e-13
Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
Query: 436 PPFRGFSLEEIE-EATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHL--P 491
P F L + E + + +G G+ G + F G RV+VK L + +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + LL ++H +++ +L T + V+LV G+ + + K
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVF--TPARSLEEFNDVYLVTHL--MGADLN---NIVK 114
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
L +I RG++++H + I +LK N+ +++ K
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 161
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.5 bits (164), Expect = 1e-12
Identities = 26/161 (16%), Positives = 61/161 (37%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+ FD +G GS G++ G+ ++K L K+ + + + +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
LV + + V+E+++ G + +L ++ P
Sbjct: 101 PFLVKLEFSFKDNSNLYM--------VMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQ 149
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++LH + + +LK EN+L+D+ +++ +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.5 bits (161), Expect = 1e-12
Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHR 507
++ IGEG+ G ++K V++K ++L +P S ++ + LL +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + + LV E + + L + +
Sbjct: 62 NIVRLHDVLH--------SDKKLTLVFEFCDQDLKKYF---DSCNGDLDPEIVKSFLFQL 110
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602
+G+ F H+ + +LK +N+L+++ KL
Sbjct: 111 LKGLGFCHS---RNVLHRDLKPQNLLINRNGELKL 142
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 65.6 bits (159), Expect = 3e-12
Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
N + IG GS G +Y G + G V++K +K +H L ++ ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ + C G +V+E + + + +
Sbjct: 65 IPTIRWCG-------AEGDYNVMVMELLGPSLEDLF---NFCSRKFSLKTVLLLADQMIS 114
Query: 570 GVQFLHTGVAPGIFGNNLKTENIL 593
++++H + ++K +N L
Sbjct: 115 RIEYIH---SKNFIHRDVKPDNFL 135
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 64.4 bits (156), Expect = 6e-12
Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 16/147 (10%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
++ IGEGS G +++G L + +V++K + L L
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ + + G LV++ +
Sbjct: 63 IPNVYYFG-------QEGLHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLA 112
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDK 596
VQ +H + ++K +N L+ +
Sbjct: 113 RVQSIH---EKSLVYRDIKPDNFLIGR 136
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.7 bits (154), Expect = 1e-11
Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 21/165 (12%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLK----LKQRHLPQSLMQHVELLS 502
NF+ ++G G+ G+++ G ++K LK +++ + ++L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
+R ++T T + + L+L++I+ G L +L+ ++ + +
Sbjct: 84 HIRQS-------PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG 136
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I+ A L GI ++K ENILLD L+ + +
Sbjct: 137 EIVLA------LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL 175
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (151), Expect = 2e-11
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 18/153 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK------QRHLPQSLMQHVELLSK 503
+ + L+G G G +Y G ++D V++K ++ + + V LL K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
+ ++ D + L+LE ++ L+ +
Sbjct: 64 VSSGF------SGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEELARSF 115
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596
V+ H G+ ++K ENIL+D
Sbjct: 116 FWQVLEAVRHCHN---CGVLHRDIKDENILIDL 145
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.0 bits (152), Expect = 3e-11
Identities = 29/154 (18%), Positives = 61/154 (39%), Gaps = 14/154 (9%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKLRHR 507
+ IG G+QG + + V++K L + + + + + L+ + H+
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+++S+L T Q V+LV+E + + + + ++
Sbjct: 77 NIISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMEL------DHERMSYLLYQM 128
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601
G++ LH + GI +LK NI++ T K
Sbjct: 129 LCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 159
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 62.7 bits (151), Expect = 5e-11
Identities = 34/175 (19%), Positives = 70/175 (40%), Gaps = 10/175 (5%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
+NL LSL L + +L L++++N I P ++ L L + L N
Sbjct: 219 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 274
Query: 184 LNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLK 243
++ P L S KN+ + L N++ P + + +L+
Sbjct: 275 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 332
Query: 244 QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298
+ ++N S L +L +I +L+ NQ+S+ P ++ ++ + ++
Sbjct: 333 RLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 40.4 bits (93), Expect = 5e-04
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI 164
L+ FN + ++ L+ L+ L + + S + ++ L+ N I
Sbjct: 310 TYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLT 367
Query: 165 PMEITSLKNLKSIVLADN 182
P + +L + + L D
Sbjct: 368 P--LANLTRITQLGLNDQ 383
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.9 bits (141), Expect = 7e-10
Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 9/145 (6%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+G G ++ + + + V++K ++ + ++ ++LL ++
Sbjct: 20 KLGWGHFSTVWLAKDMVNNTHVAMKIVR-GDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78
Query: 517 ---ILTYQDHPNT--GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
IL DH N + V +V+ G L + + I G+
Sbjct: 79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138
Query: 572 QFLHTGVAPGIFGNNLKTENILLDK 596
++H GI ++K EN+L++
Sbjct: 139 DYMHRR--CGIIHTDIKPENVLMEI 161
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.0 bits (131), Expect = 1e-08
Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183
+ +L L + + +L L + +N I P L L+ + L+ N
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 184 LNGSVPDLQRLV-LLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS--EIPSGLKNFD 240
L + + + L + ++ V L N L+S +
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 150
Query: 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
+L I+ N Q PS+ L+L GN++++ ++ L + +S N +
Sbjct: 151 KLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 207
Query: 301 IGKLPSCIGSNSLNRTVVSTWNCL 324
+ + R + N L
Sbjct: 208 SAVDNGSLANTPHLRELHLNNNKL 231
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 54.7 bits (130), Expect = 1e-08
Identities = 31/192 (16%), Positives = 72/192 (37%), Gaps = 6/192 (3%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF 207
+L++ +N I + +LKNL +++L +N ++ P LV LE L L N
Sbjct: 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 91
Query: 208 GPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISS--NNFVGPIQSFLFSLPS 265
+ K + + + N + S +Q+ ++ + G +
Sbjct: 92 KELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 151
Query: 266 ILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325
+ Y+ +A ++ +P + S L + + N + + + + + ++N +S
Sbjct: 152 LSYIRIADTNITT-IPQGLPPS--LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 208
Query: 326 GVNTKYQHPYSF 337
V+
Sbjct: 209 AVDNGSLANTPH 220
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 26/210 (12%), Positives = 52/210 (24%), Gaps = 29/210 (13%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L L+ L L L L V + + + + ++
Sbjct: 75 FAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTN 134
Query: 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNF 239
Q + L + + + L ++ + L N + + LK
Sbjct: 135 PLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGL 194
Query: 240 DQLKQFDISSNNFVGPIQSFL-----------------------FSLPSILYLNLAGNQL 276
+ L + +S N+ L I + L N +
Sbjct: 195 NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNI 254
Query: 277 SE------ALPVNISCSAKLNFVEISHNLL 300
S P + A + V + N +
Sbjct: 255 SAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.1 bits (100), Expect = 6e-05
Identities = 19/122 (15%), Positives = 35/122 (28%)
Query: 212 PSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNL 271
L + + L+NN + KN L + +N L + L L
Sbjct: 27 KDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86
Query: 272 AGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTKY 331
+ NQL E +L E + + + + + + N +
Sbjct: 87 SKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF 146
Query: 332 QH 333
Q
Sbjct: 147 QG 148
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.3 bits (90), Expect = 0.001
Identities = 33/233 (14%), Positives = 71/233 (30%), Gaps = 12/233 (5%)
Query: 13 LFLVIFMILVPVSIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVC 72
L + P + L E L + Q ++ + + + +
Sbjct: 62 LINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFN 121
Query: 73 TNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLV 132
+++ + + N + F A+ NI L +L L L
Sbjct: 122 GLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL--PPSLTELHLD 179
Query: 133 SLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQ 192
+ + + +L L +S N I + + +L+ + L +N L L
Sbjct: 180 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLA 239
Query: 193 RLVLLEELNLGGNDF---------GPKFPSLSKNIVSVILRNNSLR-SEIPSG 235
++ + L N+ P + + + V L +N ++ EI
Sbjct: 240 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 292
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 50.9 bits (121), Expect = 7e-08
Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 9/141 (6%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR-HLVSILGH 515
L+GEG + ++ + VK K+ + + +
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
L V V N L + + + + ++ V +
Sbjct: 66 RALQKLQGLA----VPKVYAWEGNAVLMELIDAKELYRVRVENPD-EVLDMILEEVAKFY 120
Query: 576 TGVAPGIFGNNLKTENILLDK 596
GI +L N+L+ +
Sbjct: 121 ---HRGIVHGDLSQYNVLVSE 138
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.4 bits (112), Expect = 3e-07
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKN 238
LA L + L++L+L+ L+L N P+L+ +L+ + E G+ N
Sbjct: 5 LAHKDLT-VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVAN 63
Query: 239 FDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSE 278
+L++ + +N L S P ++ LNL GN L +
Sbjct: 64 LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.4 bits (99), Expect = 2e-05
Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 152 VLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKF 211
VL+++ + + + L + + L+ N L P L L LE L N
Sbjct: 2 VLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 212 PSLSKNIV-SVILRNNSLRS-EIPSGLKNFDQLKQFDISSNNFVGP---IQSFLFSLPSI 266
+ + ++L NN L+ L + +L ++ N+ + LPS+
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119
Query: 267 LYL 269
+
Sbjct: 120 SSI 122
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (107), Expect = 6e-06
Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 8/187 (4%)
Query: 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179
L L L L GL P +L+ L + N + L NL + L
Sbjct: 101 FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160
Query: 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRN---NSLRSEIPSG 235
N ++ + L L+ L L N P +++ ++ N+L +
Sbjct: 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220
Query: 236 LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295
L L+ ++ N +V ++ + + +++ +LP + A + +
Sbjct: 221 LAPLRALQYLRLNDNPWVCDCRARPL-WAWLQKFRGSSSEVPCSLPQRL---AGRDLKRL 276
Query: 296 SHNLLIG 302
+ N L G
Sbjct: 277 AANDLQG 283
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.9 bits (99), Expect = 7e-05
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKN 217
N EI +L+ + +++N L +P L LE L N + P L +N
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL--PPRLERLIASFNHLA-EVPELPQN 325
Query: 218 IVSVILRNNSLRS--EIPSGLKN 238
+ + + N LR +IP +++
Sbjct: 326 LKQLHVEYNPLREFPDIPESVED 348
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.0 bits (94), Expect = 4e-04
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 144 INRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203
+ SLE LN+S+N + E+P L+ L + + N L VP+L L++L++
Sbjct: 280 CDLPPSLEELNVSNNKL-IELPALPPRLERL---IASFNHLA-EVPEL--PQNLKQLHVE 332
Query: 204 GNDFGPKFPSLSKNIVSVILRNNS 227
N +FP + +++ LR NS
Sbjct: 333 YNPL-REFPDIPESVED--LRMNS 353
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.5 bits (85), Expect = 0.003
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282
N+ +EI S L++ ++S+N + P + L + N L+E +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNK----LIELPALPPRLERLIASFNHLAE-VPE 321
Query: 283 NISCSAKLNFVEISHNLL--IGKLPSCIGSNSLN 314
L + + +N L +P + +N
Sbjct: 322 LPQ---NLKQLHVEYNPLREFPDIPESVEDLRMN 352
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.3 bits (97), Expect = 2e-04
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 15/93 (16%)
Query: 197 LEELNLGGNDFGPK-----FPSLSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDI 247
++ L++ + P L + V L + L I S L+ L + ++
Sbjct: 4 IQSLDIQCEELSDARWAELLPLL-QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 248 SSNNF----VGPIQSFLFS-LPSILYLNLAGNQ 275
SN V + L + I L+L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (96), Expect = 2e-04
Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 13/105 (12%)
Query: 135 GLWGPLPSKINRFWSLEVLNISSNFIYGE----IPMEITSLKNLKSIVLADNLLNGSVPD 190
G+ L VL ++ + + + + +L+ + L++N L +
Sbjct: 356 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415
Query: 191 L------QRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLR 229
Q LLE+L L + + + ++ SLR
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYWSEEMEDR---LQALEKDKPSLR 457
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 3e-04
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 149 SLEVLNISSNFIYGEIPMEI-TSLKNLKSIVLADNLLNGSVPD-----LQRLVLLEELNL 202
++ L+I + E+ L+ + + L D L + L+ L ELNL
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 203 GGNDFGPK-FPSLSKNIVSVILRNNSLR 229
N+ G + + + + + L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLS 90
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 4e-04
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 5/91 (5%)
Query: 215 SKNIVSVILRNNSLRSE-IPSGLKNFDQLKQFDISSNNF----VGPIQSFLFSLPSILYL 269
S +I S+ ++ L L Q + + I S L P++ L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 270 NLAGNQLSEALPVNISCSAKLNFVEISHNLL 300
NL N+L + + + +I L
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSL 91
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (85), Expect = 0.004
Identities = 10/91 (10%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 229 RSEIPSGLKNFDQLKQFDISSNNF----VGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284
R + L+ ++ + + + L + S+ L+L+ N L +A + +
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 417
Query: 285 S-----CSAKLNFVEISHNLLIGKLPSCIGS 310
L + + ++ + +
Sbjct: 418 VESVRQPGCLLEQLVLYDIYWSEEMEDRLQA 448
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (85), Expect = 0.003
Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 31/204 (15%)
Query: 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180
+K+++ ++ L LP + + +L++S N +Y + L + L
Sbjct: 7 SKVASHLEVNCDKRNLTA-LPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNL- 62
Query: 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP--------------------------SL 214
D + L +L L+L N
Sbjct: 63 DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122
Query: 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
+ + L+ N L++ P L +L++ +++NN L L ++ L L N
Sbjct: 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182
Query: 275 QLSEALPVNISCSAKLNFVEISHN 298
L +P S L F + N
Sbjct: 183 SLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.3 bits (83), Expect = 0.004
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 163 EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG--PKFPSLSKNIVS 220
++ + ++ + L L S PDL + LN + ++S
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLR-SDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLS 69
Query: 221 VILRNNSLR--SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278
+ L NN L ++ S ++ LK ++S N + + L L GN LS+
Sbjct: 70 LNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD 129
Query: 279 ALP 281
Sbjct: 130 TFR 132
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 640 | |||
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.98 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.98 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.97 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.97 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.97 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.96 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.93 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.93 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.93 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.92 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.91 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.88 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.88 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.87 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.84 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.81 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.8 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.79 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.79 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.78 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.76 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.76 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.68 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.6 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.58 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.57 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.56 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.51 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.47 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.46 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.46 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.44 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.43 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.42 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.31 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.3 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.25 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.2 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.48 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.47 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.34 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.74 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.54 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.5 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.27 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.83 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.68 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.6 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.46 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 95.12 |
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=2e-42 Score=354.83 Aligned_cols=292 Identities=22% Similarity=0.299 Sum_probs=259.1
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC--CCCCCcccEEeCC----CcEEEEEecCCCCCCCCCCCCc-CCCcc
Q 006570 29 LTPSETRILFQVQKLLEYPEVLQGWTDWTNFCY--LPSSSSLKIVCTN----SRVTELTVIGNKSSPAHSPKPT-FGKFS 101 (640)
Q Consensus 29 ~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~--~~~~~~~gv~C~~----~~v~~l~l~~~~~~~~~~~~~~-~~~~~ 101 (640)
|.++|++||++||+.+.+|..+++|..++|||. |. ||+|+. .||++|+|+++.++|..+-++. ...+.
T Consensus 3 c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~w~-----gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~ 77 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCcCC-----CeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcc
Confidence 679999999999999999888999998899995 65 899974 3799999999998775332223 33589
Q ss_pred ccccccCc-cCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 102 ASQQSLSA-NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 102 l~~l~l~~-n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
|++|+|++ |.+.|.+|..|++|++|++|+|++|++.+..|..+..+.+|+++++++|.+.+.+|..+.++++|+.++++
T Consensus 78 L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~ 157 (313)
T d1ogqa_ 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecc
Confidence 99999987 78888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCccCCC-ccCcCcC-CeeEccCCCCCCCCCCccc--ccceeecccCcccccCCccccCCCCccEEEccCCcccCcC
Q 006570 181 DNLLNGSVPD-LQRLVLL-EELNLGGNDFGPKFPSLSK--NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (640)
Q Consensus 181 ~N~l~~~~~~-~~~l~~L-~~L~L~~N~l~~~~~~~~~--~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 256 (640)
+|.+++.+|. +..+..+ +.+++++|++++..|..+. .+..+++++|.+.+.+|..+..+++|+.|++++|.+++.+
T Consensus 158 ~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~ 237 (313)
T d1ogqa_ 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999998886 7777765 8899999999988887643 3456888999999999999999999999999999999876
Q ss_pred CccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc-ccCc
Q 006570 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC-LSGV 327 (640)
Q Consensus 257 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~-l~~~ 327 (640)
| .++.+++|+.|+|++|+|+|.+|..++++++|++|||++|+|+|.+|. ++++++|+.+++++|+ ++|.
T Consensus 238 ~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 238 G-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp G-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEEST
T ss_pred c-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCC
Confidence 6 588899999999999999999999999999999999999999999995 5788899999999996 7775
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-40 Score=328.72 Aligned_cols=175 Identities=22% Similarity=0.324 Sum_probs=147.8
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||+||+|+++ ..||||+++... ....+.|.+|+++|++++|||||+++|++. .
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~---------~ 75 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---------A 75 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------S
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe---------c
Confidence 467899999999999999999874 369999997543 334578999999999999999999999873 2
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|||||++|+|.++++. ....+++..++.|+.|||+||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGl 150 (276)
T d1uwha_ 76 PQLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGL 150 (276)
T ss_dssp SSCEEEEECCCEEEHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCC
T ss_pred cEEEEEEecCCCCCHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccc
Confidence 347999999999999999974 34569999999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ ... +.++|||||||++|||+||+
T Consensus 151 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~ 206 (276)
T d1uwha_ 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206 (276)
T ss_dssp SCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred eeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCC
Confidence 9765321110 122 77899999999999999985
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-40 Score=331.26 Aligned_cols=177 Identities=19% Similarity=0.371 Sum_probs=152.8
Q ss_pred HhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
..++|+..+.||+|+||+||+|++++++.||||+++.. ....++|.+|++++++++|||||+++|++. .+
T Consensus 11 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~---------~~ 80 (272)
T d1qpca_ 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT---------QE 80 (272)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------SS
T ss_pred CHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeec---------cC
Confidence 34678888999999999999999988889999999754 345678999999999999999999999873 23
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++|||||++|+|.+++... ....++|..++.|+.||++||+|||+ .+|+||||||+|||+++++.+||+|||+|
T Consensus 81 ~~~iv~Ey~~~g~L~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla 156 (272)
T d1qpca_ 81 PIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLA 156 (272)
T ss_dssp SCEEEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CeEEEEEeCCCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccce
Confidence 469999999999999988642 23458999999999999999999999 79999999999999999999999999999
Q ss_pred ccccCCCCc------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 609 LPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 609 ~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+........ ... +.++|||||||++|||+||
T Consensus 157 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~ 206 (272)
T d1qpca_ 157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206 (272)
T ss_dssp EECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred EEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhC
Confidence 876432110 334 8999999999999999996
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.8e-40 Score=330.99 Aligned_cols=180 Identities=16% Similarity=0.320 Sum_probs=155.6
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
...++|+..+.||+|+||+||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++|+|. +
T Consensus 14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~--------~ 84 (287)
T d1opja_ 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--------R 84 (287)
T ss_dssp CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--------S
T ss_pred ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEe--------e
Confidence 34567888899999999999999964 58899999997543 45678999999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
++..++|||||++|+|.+++.. .....+++..++.|+.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 85 ~~~~~iv~E~~~~g~l~~~l~~-~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG 160 (287)
T d1opja_ 85 EPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFG 160 (287)
T ss_dssp SSSCEEEEECCTTCBHHHHHHH-SCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred CCeeEEEeecccCcchHHHhhh-ccccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEcccc
Confidence 4568999999999999999975 335678999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++|||||||++|||++|.
T Consensus 161 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~ 213 (287)
T d1opja_ 161 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 213 (287)
T ss_dssp CTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTS
T ss_pred ceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCC
Confidence 99876433211 334 89999999999999999963
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-39 Score=323.86 Aligned_cols=175 Identities=18% Similarity=0.358 Sum_probs=154.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|++++++++|||||++++++. ..+.
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~--------~~~~ 91 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL--------VGDE 91 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ETTE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEE--------ECCE
Confidence 4699999999999999999994 579999999998766666788999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.|+|||||++|+|.+++.+ ..+++.++..|+.|++.||+|||+ .+||||||||+|||++.++++||+|||+|+
T Consensus 92 ~~ivmEy~~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~ 164 (293)
T d1yhwa1 92 LWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (293)
T ss_dssp EEEEEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEEecCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhhe
Confidence 8999999999999998864 358999999999999999999999 799999999999999999999999999998
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++||||+||++|||+||.
T Consensus 165 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~ 213 (293)
T d1yhwa1 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213 (293)
T ss_dssp ECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCC
Confidence 65332211 334 89999999999999999985
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-39 Score=323.19 Aligned_cols=175 Identities=18% Similarity=0.361 Sum_probs=147.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||+||+|++.+++.||||+++.. ....++|.+|++++++++|||||+++|+|. ..+..
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~--------~~~~~ 75 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL--------EQAPI 75 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SSSSC
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceec--------cCCce
Confidence 467778999999999999999888899999999754 345688999999999999999999999985 34558
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++|||||++|+|.+++.. ....++|..++.|+.|+|+||+|||+ .+|+||||||+|||+|+++.+||+|||+++.
T Consensus 76 ~lv~E~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~ 150 (263)
T d1sm2a_ 76 CLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150 (263)
T ss_dssp EEEEECCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC----
T ss_pred EEEEEecCCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchhee
Confidence 999999999999999874 34568999999999999999999999 7999999999999999999999999999986
Q ss_pred ccCCCCc------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 611 SKVRNTL------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 611 ~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
....... +.. +.++|||||||++|||+||
T Consensus 151 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~ 198 (263)
T d1sm2a_ 151 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 198 (263)
T ss_dssp --------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHC
Confidence 5332110 334 8899999999999999985
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-38 Score=317.29 Aligned_cols=176 Identities=18% Similarity=0.291 Sum_probs=154.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+++.||+|++... .....+.+.+|++++++++|||||++++++. +
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~ 77 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH--------D 77 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEE--------E
Confidence 4688889999999999999995 46889999998743 3445678999999999999999999999985 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...|+|||||++|+|.+++.. ...+++..+..|+.|++.||+|||+ .+||||||||+|||++.++.+||+|||
T Consensus 78 ~~~~~ivmEy~~~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG 151 (263)
T d2j4za1 78 ATRVYLILEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFG 151 (263)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCEEEEEEeecCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccc
Confidence 5568999999999999999975 3468999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++|||||||++|||+||.
T Consensus 152 ~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~ 201 (263)
T d2j4za1 152 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 201 (263)
T ss_dssp SCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred eeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCC
Confidence 99876543221 334 89999999999999999984
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-39 Score=322.44 Aligned_cols=176 Identities=23% Similarity=0.367 Sum_probs=149.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+++.+|+++|++++|||||++++++. ++.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~--------~~~ 76 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR--------EGN 76 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEE--------ETT
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeec--------cCc
Confidence 5688899999999999999995 568999999997543 233467899999999999999999999986 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..|+|||||++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+|
T Consensus 77 ~~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a 150 (271)
T d1nvra_ 77 IQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 150 (271)
T ss_dssp EEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eeEEEEeccCCCcHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhh
Confidence 68999999999999999953 4579999999999999999999999 79999999999999999999999999999
Q ss_pred ccccCCC----------Cc---------cCC--CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN----------TL---------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~----------~~---------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... +. +.. +.++||||+||++|||+||+
T Consensus 151 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~ 203 (271)
T d1nvra_ 151 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203 (271)
T ss_dssp EECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred eeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCC
Confidence 8653211 10 222 57899999999999999985
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.4e-39 Score=326.46 Aligned_cols=175 Identities=19% Similarity=0.353 Sum_probs=140.4
Q ss_pred CCCCCCccccCCccceEEEEeC-CC---cEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT-DG---SRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
+|+..+.||+|+||+||+|+.. ++ ..||||++.... ....++|.+|+++|++++|||||+++|+|. .
T Consensus 27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~--------~ 98 (299)
T d1jpaa_ 27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT--------K 98 (299)
T ss_dssp GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--------S
T ss_pred hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEe--------e
Confidence 4556689999999999999964 23 358999886532 223467999999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++|||||++|+|.+++.. ....++|.+++.|+.|||+||+|||+ .+|+||||||+|||++.++++||+|||
T Consensus 99 ~~~~~iv~Ey~~~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG 173 (299)
T d1jpaa_ 99 STPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFG 173 (299)
T ss_dssp SSSCEEEEECCTTEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CCEEEEEEEecCCCcceeeecc--ccCCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcc
Confidence 4568999999999999999874 34569999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCC---------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 607 IPLPSKVRNT---------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 607 la~~~~~~~~---------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+|+....... + +.. +.++|||||||++|||+| |
T Consensus 174 la~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g 230 (299)
T d1jpaa_ 174 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 230 (299)
T ss_dssp ----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCC
Confidence 9986532211 0 334 889999999999999998 5
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-38 Score=311.89 Aligned_cols=176 Identities=16% Similarity=0.300 Sum_probs=154.1
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|++++++++||||++++|+|. +....
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~--------~~~~~ 74 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT--------KQRPI 74 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------CSSSE
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEe--------eCCce
Confidence 5788999999999999999999888899999998643 45688999999999999999999999985 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++.. ....+++..+++++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++.
T Consensus 75 ~iv~Ey~~~g~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~ 149 (258)
T d1k2pa_ 75 FIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 149 (258)
T ss_dssp EEEEECCTTEEHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCB
T ss_pred EEEEEccCCCcHHHhhhc--cccCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhhee
Confidence 999999999999999864 34568999999999999999999999 7999999999999999999999999999976
Q ss_pred ccCCCCc------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 611 SKVRNTL------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 611 ~~~~~~~------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
....... ... +.++|||||||++|||+| |.
T Consensus 150 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~ 199 (258)
T d1k2pa_ 150 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199 (258)
T ss_dssp CSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred ccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCC
Confidence 5432211 334 889999999999999998 53
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-39 Score=323.73 Aligned_cols=177 Identities=15% Similarity=0.272 Sum_probs=152.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|++.+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++. +.+.
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--------~~~~ 83 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY--------YENN 83 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEE--------ETTE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--------eCCe
Confidence 4578889999999999999995 568999999998765556678999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++|||||++|+|.+++.+. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+|+
T Consensus 84 ~~lvmEy~~~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~ 158 (288)
T d2jfla1 84 LWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSA 158 (288)
T ss_dssp EEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhh
Confidence 89999999999999998642 3569999999999999999999999 799999999999999999999999999997
Q ss_pred cccCC--------CCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVR--------NTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~--------~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... .+. ... +.++|||||||++|||+||.
T Consensus 159 ~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~ 212 (288)
T d2jfla1 159 KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 212 (288)
T ss_dssp ECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCC
Confidence 54211 110 122 78999999999999999984
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-39 Score=331.11 Aligned_cols=178 Identities=17% Similarity=0.298 Sum_probs=153.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|++.+.||+|+||+||+|+. .+|+.||+|+++... ....+++.+|+++|++++|||||++++++. +.
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--------~~ 76 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--------SD 76 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE--------CS
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------EC
Confidence 46788999999999999999995 578999999997643 333568999999999999999999999986 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+|||||++|+|.+++++ ...+++..+..++.|++.||+|||+. .+|+||||||+|||+++++.+||+|||+
T Consensus 77 ~~~~iVmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGl 151 (322)
T d1s9ja_ 77 GEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 151 (322)
T ss_dssp SEEEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred CEEEEEEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCC
Confidence 568999999999999999975 34589999999999999999999962 3899999999999999999999999999
Q ss_pred CccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ +.. +.++||||+||++|||+||+
T Consensus 152 a~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~ 200 (322)
T d1s9ja_ 152 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200 (322)
T ss_dssp CHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 9865321111 445 99999999999999999995
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-39 Score=323.26 Aligned_cols=177 Identities=21% Similarity=0.377 Sum_probs=150.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|++.+.||+|+||+||+|+.++++.||||+++.. ....++|.+|++++++++|||||+++|+|. .+.
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~---------~~~ 85 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------EEP 85 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------SSS
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe---------cCC
Confidence 4578889999999999999999988889999999754 345688999999999999999999999873 123
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++|||||++|+|.+++... ....++|.+++.|+.||++||+|||+ .+|+||||||+|||+|+++++||+|||+++
T Consensus 86 ~~lv~Ey~~~g~l~~~~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~ 161 (285)
T d1fmka3 86 IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR 161 (285)
T ss_dssp CEEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred eEEEEEecCCCchhhhhhhc-ccccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhh
Confidence 69999999999999998752 23468999999999999999999999 699999999999999999999999999998
Q ss_pred cccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++|||||||++|||+||+
T Consensus 162 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~ 211 (285)
T d1fmka3 162 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 211 (285)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred hccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCC
Confidence 65322111 334 99999999999999999974
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-38 Score=317.45 Aligned_cols=176 Identities=18% Similarity=0.275 Sum_probs=152.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+++|++++|||||++++++. +
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--------~ 79 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ--------D 79 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE--------C
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE--------E
Confidence 4688899999999999999995 57899999999753 2345678999999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..|+|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+||||||||+|||+++++.+||+|||
T Consensus 80 ~~~~~ivmEy~~gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG 153 (288)
T d1uu3a_ 80 DEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFG 153 (288)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEEccCCCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccc
Confidence 4678999999999999999875 3568999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCC----------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRN----------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~----------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+...... +. +.. +.++||||+||++|||+||+
T Consensus 154 ~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~ 207 (288)
T d1uu3a_ 154 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 207 (288)
T ss_dssp TCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCC
Confidence 998653211 10 334 88999999999999999995
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-39 Score=319.39 Aligned_cols=184 Identities=21% Similarity=0.302 Sum_probs=144.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+. ..
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------~~ 77 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------TN 77 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC---------
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeC------CC
Confidence 5788899999999999999984 5789999999975432 2245689999999999999999999988631 33
Q ss_pred CeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCC--CCCeeccCCCCCceeecCCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGV--APGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
..+|+|||||++|+|.+++.+. +....+++..++.++.|++.||+|||+.. ..+||||||||+|||++.++.+||+|
T Consensus 78 ~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~D 157 (269)
T d2java1 78 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 157 (269)
T ss_dssp -CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECC
T ss_pred CEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEee
Confidence 4589999999999999999643 23467999999999999999999999721 13599999999999999999999999
Q ss_pred CCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|+........ +.. +.++|||||||++|||+||.
T Consensus 158 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~ 211 (269)
T d2java1 158 FGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 211 (269)
T ss_dssp HHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCC
Confidence 9999865432110 334 89999999999999999984
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-38 Score=317.10 Aligned_cols=175 Identities=18% Similarity=0.344 Sum_probs=146.5
Q ss_pred cCCCCCC-ccccCCccceEEEEeC---CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTN-LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|...+ +||+|+||+||+|.++ ++..||||+++.... ...++|.+|+++|++++|||||+++|+|.
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-------- 79 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-------- 79 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec--------
Confidence 3455556 4999999999999753 355799999975432 23468999999999999999999999884
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+..|+|||||++|+|.+++.. ....+++.++..|+.|+++||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 80 -~~~~~lvmE~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DF 153 (285)
T d1u59a_ 80 -AEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDF 153 (285)
T ss_dssp -SSSEEEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCC
T ss_pred -cCeEEEEEEeCCCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccc
Confidence 1247999999999999999864 34569999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 606 NIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 606 Gla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+++........ ... +.++|||||||++|||+| |
T Consensus 154 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G 209 (285)
T d1u59a_ 154 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 209 (285)
T ss_dssp TTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred hhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCC
Confidence 999865432110 234 889999999999999998 6
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-37 Score=310.89 Aligned_cols=179 Identities=21% Similarity=0.282 Sum_probs=147.8
Q ss_pred CCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 454 DPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
...+.||+|+||+||+|+. .+++.||+|++..... ...+.+.+|+++|++++|||||++++++.... .....+
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----~~~~~~ 87 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV----KGKKCI 87 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES----SSCEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecc----ccCCEE
Confidence 3456799999999999995 4688999999975432 23467899999999999999999999986432 234568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec-CCCceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DfGla~ 609 (640)
|+|||||++|+|.+++.+ ...+++..+..++.||++||+|||++ .++|+||||||+|||++ +++.+||+|||+|+
T Consensus 88 ~ivmE~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~ 163 (270)
T d1t4ha_ 88 VLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 163 (270)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEeCCCCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence 999999999999999975 34689999999999999999999983 12399999999999996 57899999999998
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++|||||||++|||+||.
T Consensus 164 ~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~ 209 (270)
T d1t4ha_ 164 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSE 209 (270)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eccCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCC
Confidence 65432211 334 99999999999999999984
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-37 Score=316.73 Aligned_cols=175 Identities=21% Similarity=0.291 Sum_probs=150.1
Q ss_pred CCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.|+..+.||+|+||+||+|+ ..+|+.||||+++..... ..+++.+|+++|++++|||||++++++. +.
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--------~~ 87 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL--------RE 87 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------ET
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEE--------EC
Confidence 47888999999999999999 457899999999754332 2356889999999999999999999986 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+|||||++|+|..++.. ...+++.++..|+.||+.||+|||+ .+||||||||+|||+++++.+||+|||+
T Consensus 88 ~~~~iv~E~~~~g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~ 161 (309)
T d1u5ra_ 88 HTAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGS 161 (309)
T ss_dssp TEEEEEEECCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred CEEEEEEEecCCCchHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeeccc
Confidence 568999999999999877653 4569999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ ... +.++|||||||++|||++|.
T Consensus 162 a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~ 211 (309)
T d1u5ra_ 162 ASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211 (309)
T ss_dssp CBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCC
Confidence 9876443221 123 78999999999999999984
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-37 Score=312.02 Aligned_cols=168 Identities=20% Similarity=0.375 Sum_probs=141.6
Q ss_pred CccccCCccceEEEEeCC---CcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFLTD---GSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
++||+|+||+||+|.+++ ++.||||+++.... ...++|.+|+++|++++|||||+++|+|. .+..+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~---------~~~~~ 83 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE---------AESWM 83 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE---------SSSEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec---------cCCEE
Confidence 469999999999998543 46899999975432 23467999999999999999999999884 12368
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+|||||++|+|.++++. ...++|.+++.|+.||++||+|||+ .+||||||||+|||++.++.+||+|||+++..
T Consensus 84 lvmE~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~ 157 (277)
T d1xbba_ 84 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157 (277)
T ss_dssp EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhc
Confidence 99999999999999975 4569999999999999999999998 69999999999999999999999999999865
Q ss_pred cCCCCc--------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 612 KVRNTL--------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 612 ~~~~~~--------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... ... +.++|||||||++|||+| |
T Consensus 158 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g 207 (277)
T d1xbba_ 158 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 207 (277)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCC
Confidence 332111 333 889999999999999997 5
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2e-37 Score=320.74 Aligned_cols=177 Identities=16% Similarity=0.247 Sum_probs=153.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++. ++..
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--------~~~~ 100 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE--------DKYE 100 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE--------CSSE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------ECCE
Confidence 5688999999999999999994 579999999998654444567889999999999999999999885 4567
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec--CCCceEEeCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KALTAKLSGYNI 607 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~--~~~~~kl~DfGl 607 (640)
.|+|||||++|+|.+++.. ....+++.+++.|+.||+.||+|||+ .+||||||||+|||++ .++.+||+|||+
T Consensus 101 ~~ivmE~~~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGl 175 (352)
T d1koba_ 101 MVLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGL 175 (352)
T ss_dssp EEEEEECCCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTT
T ss_pred EEEEEEcCCCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeeccc
Confidence 8999999999999998863 34569999999999999999999998 7999999999999998 568999999999
Q ss_pred CccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ +.. +.++||||+||++|||+||.
T Consensus 176 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~ 225 (352)
T d1koba_ 176 ATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 225 (352)
T ss_dssp CEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred ceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCC
Confidence 9876543221 333 89999999999999999994
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-37 Score=316.02 Aligned_cols=177 Identities=16% Similarity=0.217 Sum_probs=154.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+++|++++||||+++++++.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------- 75 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-------- 75 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE--------
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec--------
Confidence 35788899999999999999994 57999999999753 2345678899999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+...+|+|||||++|+|.+++.. ...+++..++.++.|++.||+|||+ .+||||||||+|||+++++.+||+||
T Consensus 76 ~~~~~~iv~ey~~gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DF 149 (337)
T d1o6la_ 76 THDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred cccccccceeccCCCchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeec
Confidence 45679999999999999999975 4468999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|+........ +.. +.++||||+||++|||++|.
T Consensus 150 G~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~ 202 (337)
T d1o6la_ 150 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202 (337)
T ss_dssp TTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCC
Confidence 999865432111 333 89999999999999999984
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.1e-37 Score=320.34 Aligned_cols=178 Identities=15% Similarity=0.265 Sum_probs=153.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++. ++.
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~--------~~~ 96 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE--------DDN 96 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE--------ETT
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE--------ECC
Confidence 35799999999999999999995 579999999997654445578899999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--CCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--ALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DfG 606 (640)
..|+|||||++|+|.+++.. ....+++..+..|+.||+.||+|||+ .+||||||||+|||++. ++.+||+|||
T Consensus 97 ~~~ivmE~~~gg~L~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG 171 (350)
T d1koaa2 97 EMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFG 171 (350)
T ss_dssp EEEEEECCCCSCBHHHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEEEcCCCCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecc
Confidence 68999999999999999964 34569999999999999999999999 79999999999999964 5889999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++||||+||++|||+||+
T Consensus 172 ~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~ 222 (350)
T d1koaa2 172 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 222 (350)
T ss_dssp TCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSS
T ss_pred hheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCC
Confidence 99876443211 334 88999999999999999995
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.8e-37 Score=312.91 Aligned_cols=176 Identities=19% Similarity=0.256 Sum_probs=154.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|++++++++|||||++++++. +
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~--------~ 75 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ--------D 75 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE--------C
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEe--------e
Confidence 5688899999999999999995 56999999999743 2345678999999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+||||||||+|||++.++.+||+|||
T Consensus 76 ~~~~~ivmE~~~gg~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG 149 (316)
T d1fota_ 76 AQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFG 149 (316)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CCeeeeEeeecCCccccccccc---cccccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCc
Confidence 5679999999999999999875 4567899999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++||||+||++|||+||.
T Consensus 150 ~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~ 198 (316)
T d1fota_ 150 FAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 198 (316)
T ss_dssp SCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred cceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCC
Confidence 99876443221 334 89999999999999999994
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-37 Score=311.77 Aligned_cols=176 Identities=19% Similarity=0.359 Sum_probs=144.4
Q ss_pred cCCCCCCccccCCccceEEEEeCCC-----cEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDG-----SRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
+.|+..+.||+|+||+||+|++++. ..||||+++.... ...++|.+|++++++++|||||+++|++.
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~------- 79 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS------- 79 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe-------
Confidence 4567788999999999999986532 3799999975432 23457899999999999999999999985
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++|||||++|++.+++.. ....++|.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 80 -~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~D 153 (283)
T d1mqba_ 80 -KYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSD 153 (283)
T ss_dssp -SSSSEEEEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECC
T ss_pred -cCCceEEEEEecccCcchhhhhc--ccccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcc
Confidence 34568999999999999998864 34569999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
||+++....... + ... +.++|||||||++|||+||
T Consensus 154 FGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~ 209 (283)
T d1mqba_ 154 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY 209 (283)
T ss_dssp CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhC
Confidence 999986532211 0 334 8899999999999999986
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.6e-37 Score=313.15 Aligned_cols=177 Identities=19% Similarity=0.331 Sum_probs=141.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+.|++.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++. ++
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--------~~ 79 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE--------SG 79 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEE--------CS
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------EC
Confidence 35688899999999999999995 468999999997543 223466889999999999999999999885 45
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec---CCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl~D 604 (640)
...|+|||||++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+. +++.+||+|
T Consensus 80 ~~~~lvmE~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~D 153 (307)
T d1a06a_ 80 GHLYLIMQLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISD 153 (307)
T ss_dssp SEEEEEECCCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred CEEEEEEeccCCCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEec
Confidence 678999999999999999964 4569999999999999999999999 7999999999999994 578999999
Q ss_pred CCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|+........ +.. +.++|||||||++|||+||.
T Consensus 154 FG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~ 206 (307)
T d1a06a_ 154 FGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 206 (307)
T ss_dssp C------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCC
Confidence 9999866432211 334 99999999999999999985
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-37 Score=308.70 Aligned_cols=176 Identities=20% Similarity=0.308 Sum_probs=152.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
+.|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~------ 83 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE------ 83 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE------
Confidence 5688999999999999999995 5789999999975321 23578999999999999999999999985
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----c
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----T 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~ 599 (640)
+....|+|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .
T Consensus 84 --~~~~~~iv~E~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~ 155 (293)
T d1jksa_ 84 --NKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPR 155 (293)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCC
T ss_pred --ECCEEEEEEEcCCCccccchhcc---ccccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccc
Confidence 45678999999999999999975 3469999999999999999999999 7999999999999998876 4
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|++|||+|+........ +.. +.++|||||||++|||+||+
T Consensus 156 vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~ 213 (293)
T d1jksa_ 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213 (293)
T ss_dssp EEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCC
Confidence 999999999876432211 334 99999999999999999985
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-37 Score=315.60 Aligned_cols=185 Identities=19% Similarity=0.343 Sum_probs=154.9
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEE
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHC 516 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~ 516 (640)
.+++...++|++.+.||+|+||+||+|+.. +++.||||+++.... ...++|.+|+++|++++||||++++++|
T Consensus 6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~ 85 (301)
T d1lufa_ 6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 85 (301)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence 455666788999999999999999999853 457899999975432 2346799999999999999999999998
Q ss_pred EecccCCCCCCCeEEEEEEccCCCCHhHHhhccC---------------------CCCCCCHHHHHHHHHHHHHHhhhcc
Q 006570 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK---------------------KKDMLKWPQRMAIIIGATRGVQFLH 575 (640)
Q Consensus 517 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~L~yLH 575 (640)
. .....++||||+++|+|.++++... ....+++..++.|+.|++.||+|||
T Consensus 86 ~--------~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH 157 (301)
T d1lufa_ 86 A--------VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS 157 (301)
T ss_dssp C--------SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred c--------cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc
Confidence 5 3455899999999999999996421 1235899999999999999999999
Q ss_pred cCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHH
Q 006570 576 TGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICV 635 (640)
Q Consensus 576 ~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~e 635 (640)
+ .+||||||||+|||+|.++.+||+|||+|+........ +.. +.++|||||||++||
T Consensus 158 ~---~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~e 234 (301)
T d1lufa_ 158 E---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 234 (301)
T ss_dssp H---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred c---CCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHH
Confidence 8 79999999999999999999999999999754322110 334 899999999999999
Q ss_pred Hhhc
Q 006570 636 ITLC 639 (640)
Q Consensus 636 lltG 639 (640)
|++|
T Consensus 235 ll~~ 238 (301)
T d1lufa_ 235 IFSY 238 (301)
T ss_dssp HHTT
T ss_pred HHcc
Confidence 9987
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.5e-36 Score=303.95 Aligned_cols=176 Identities=22% Similarity=0.366 Sum_probs=151.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---------ChHHHHHHHHHHhcCC-CcccceeeeEEEec
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---------LPQSLMQHVELLSKLR-HRHLVSILGHCILT 519 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~ 519 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|++++++++ ||||+++++++.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 80 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-- 80 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE--
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc--
Confidence 6788899999999999999994 57899999999754321 1246889999999997 999999999985
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
+....|+|||||++|+|.++++. ...+++.++..++.||++||+|||+ .+|+||||||+|||++.++.
T Consensus 81 ------~~~~~~ivmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ 148 (277)
T d1phka_ 81 ------TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMN 148 (277)
T ss_dssp ------CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCC
T ss_pred ------cCcceEEEEEcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCC
Confidence 45679999999999999999975 3468999999999999999999998 79999999999999999999
Q ss_pred eEEeCCCCCccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ ... +.++||||+||++|||+||.
T Consensus 149 ~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~ 212 (277)
T d1phka_ 149 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212 (277)
T ss_dssp EEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCC
Confidence 999999999876432111 122 78999999999999999984
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-37 Score=314.94 Aligned_cols=180 Identities=19% Similarity=0.380 Sum_probs=147.6
Q ss_pred hcCCCCCCccccCCccceEEEEeCC-C-----cEEEEEEeecc-cCCChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD-G-----SRVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
.++|++.+.||+|+||+||+|+... + ..||||.+... .....+.+.+|+++|.++ +|||||+++|++.
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~---- 111 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT---- 111 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe----
Confidence 4578888999999999999998532 2 36999998653 233457899999999998 8999999999985
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCC--------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCC
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKK--------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPG 581 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 581 (640)
.....++|||||++|+|.++++..+. ...+++..++.|+.||++||+|||+ .+
T Consensus 112 ----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~ 184 (325)
T d1rjba_ 112 ----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KS 184 (325)
T ss_dssp ----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred ----eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence 34568999999999999999975321 2358999999999999999999999 79
Q ss_pred eeccCCCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 582 IFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 582 iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||||||||+|||++.++.+||+|||+|+........ +.. +.++|||||||++|||+| |.
T Consensus 185 IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~ 264 (325)
T d1rjba_ 185 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 264 (325)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred eeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCC
Confidence 999999999999999999999999999865433211 344 899999999999999997 63
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-37 Score=306.76 Aligned_cols=175 Identities=21% Similarity=0.400 Sum_probs=144.1
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+++ |+.||||+++.. ...+++.+|++++++++||||++++|+|.. .....
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~ 76 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGGL 76 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECC-------C--CC
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-------cCCcE
Confidence 45677889999999999999984 789999999743 345789999999999999999999999862 23447
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.++++.. ....++|..+++|+.||+.||+|||+ .+|+||||||+|||++.++.+|++|||+++.
T Consensus 77 ~lv~ey~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~ 152 (262)
T d1byga_ 77 YIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 152 (262)
T ss_dssp EEEECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred EEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeeccccccee
Confidence 9999999999999999752 23358999999999999999999999 7999999999999999999999999999987
Q ss_pred ccCCCCc--------------cCC-CCccceehhhHHHHHHhhc
Q 006570 611 SKVRNTL--------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 611 ~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
....... +.. +.++|||||||++|||+|+
T Consensus 153 ~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~ 196 (262)
T d1byga_ 153 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 196 (262)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHC
Confidence 6433211 344 9999999999999999984
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-36 Score=312.12 Aligned_cols=176 Identities=17% Similarity=0.242 Sum_probs=154.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++|+.++|||||++++++. .
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~ 112 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK--------D 112 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccc--------c
Confidence 4688899999999999999995 57999999999743 2345578999999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+.+|+|.+++.. ...+++..+..|+.|++.||+|||+ .+||||||||+|||++.++.+||+|||
T Consensus 113 ~~~~~~v~e~~~~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG 186 (350)
T d1rdqe_ 113 NSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ccccccccccccccchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeece
Confidence 5568999999999999999975 3468999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++|||||||++|||+||.
T Consensus 187 ~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~ 235 (350)
T d1rdqe_ 187 FAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235 (350)
T ss_dssp TCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCC
Confidence 99876543221 334 89999999999999999995
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-36 Score=309.29 Aligned_cols=177 Identities=15% Similarity=0.202 Sum_probs=151.5
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||+||+|+. .+|+.||||.++... .....+.+|+++|++++|||||++++++. +..
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--------~~~ 74 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE--------SME 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE--------ETT
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEE--------ECC
Confidence 46788999999999999999995 468899999997543 23456889999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC--CceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--LTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--~~~kl~DfG 606 (640)
.+|+|||||++|+|.++++. ....+++.++..|+.|++.||+|||+ .+|+||||||+|||++.+ ..+||+|||
T Consensus 75 ~~~lvmE~~~gg~L~~~i~~--~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG 149 (321)
T d1tkia_ 75 ELVMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccc
Confidence 69999999999999999964 23468999999999999999999998 799999999999999854 589999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||+||++|||++|.
T Consensus 150 ~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~ 200 (321)
T d1tkia_ 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200 (321)
T ss_dssp TCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS
T ss_pred hhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCC
Confidence 99876433211 333 88999999999999999995
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.8e-36 Score=312.74 Aligned_cols=176 Identities=17% Similarity=0.249 Sum_probs=148.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHH---HHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQ---HVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+.+ |+++++.++|||||++++++.
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~------ 77 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH------ 77 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE------
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEE------
Confidence 5788899999999999999995 569999999996432 223333444 467788889999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
..+..|+|||||++|+|.+++.. ...+++..+..++.||+.||+|||+ .+||||||||+|||+++++.+||+
T Consensus 78 --~~~~~~ivmE~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~ 149 (364)
T d1omwa3 78 --TPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRIS 149 (364)
T ss_dssp --CSSEEEEEECCCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEEC
T ss_pred --ECCEEEEEEEecCCCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEe
Confidence 44668999999999999999975 3468899999999999999999999 799999999999999999999999
Q ss_pred CCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+|+........ +.. +.++|||||||++|||+||.
T Consensus 150 DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~ 203 (364)
T d1omwa3 150 DLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 203 (364)
T ss_dssp CCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCC
Confidence 99999866433221 223 88999999999999999995
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-36 Score=305.94 Aligned_cols=176 Identities=20% Similarity=0.301 Sum_probs=150.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHh-cCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLS-KLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|.+.+.||+|+||+||+|+. .+|+.||||+++.. .....+.+..|+.++. .++|||||++++++.
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~-------- 73 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-------- 73 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE--------
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEc--------
Confidence 5788899999999999999995 56899999999753 2344566777777765 689999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
++...|+|||||++|+|.++++. ...+++.++..++.||+.||+|||+ .+|+||||||+|||+++++.+||+||
T Consensus 74 ~~~~~yivmEy~~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DF 147 (320)
T d1xjda_ 74 TKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADF 147 (320)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred cCCceeEEEeecCCCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceecccc
Confidence 45679999999999999999975 3458899999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++||||+||++|||+||.
T Consensus 148 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~ 200 (320)
T d1xjda_ 148 GMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 200 (320)
T ss_dssp TTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred chhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCC
Confidence 999865322111 334 89999999999999999995
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-36 Score=305.26 Aligned_cols=173 Identities=18% Similarity=0.359 Sum_probs=145.3
Q ss_pred CCccccCCccceEEEEeCCC----cEEEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 456 TNLIGEGSQGQLYKGFLTDG----SRVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.++||+|+||+||+|++.++ ..||||+++.. .....++|.+|+++|++++||||++++|+|.. .+...
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~ 104 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR-------SEGSP 104 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE-------TTTEE
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEe-------cCCce
Confidence 46799999999999996432 36999999743 22334779999999999999999999999863 23468
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++|||||++|+|.++++. ....+++..+++++.|+++||.|||+ .+|+||||||+|||+|+++.+||+|||+++.
T Consensus 105 ~lv~E~~~~g~l~~~~~~--~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~ 179 (311)
T d1r0pa_ 105 LVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 179 (311)
T ss_dssp EEEEECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCC
T ss_pred EEEEEEeecCchhhhhcc--ccccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhh
Confidence 999999999999999974 34567899999999999999999998 7999999999999999999999999999986
Q ss_pred ccCCCCc---------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNTL---------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~~---------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... ... +.++||||||+++|||+||.
T Consensus 180 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~ 231 (311)
T d1r0pa_ 180 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 231 (311)
T ss_dssp TTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCC
Confidence 5322110 334 99999999999999999963
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-36 Score=306.67 Aligned_cols=178 Identities=22% Similarity=0.379 Sum_probs=144.0
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHH--HHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ--HVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~--E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||+||+|++ +|+.||||+++... .+++.+ |+..+.+++|||||+++|+|..... ...
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~----~~~ 74 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG----TWT 74 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCC----cce
Confidence 3466678899999999999997 58899999997432 344444 4445567899999999999974322 334
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCCceEEe
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.+|+|||||++|+|.+++++ ..++|.+++.++.|+|.||+|+|+.. .++||||||||+|||+|+++.+||+
T Consensus 75 ~~~lv~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~ 150 (303)
T d1vjya_ 75 QLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEE
Confidence 68999999999999999974 35899999999999999999999621 2699999999999999999999999
Q ss_pred CCCCCccccCCCCc---------------------c------CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL---------------------S------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~---------------------~------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++........ . .. +.++|||||||++|||+||+
T Consensus 151 DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~ 215 (303)
T d1vjya_ 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 215 (303)
T ss_dssp CCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred ecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCC
Confidence 99999865332110 0 12 66899999999999999985
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-36 Score=302.82 Aligned_cols=176 Identities=19% Similarity=0.290 Sum_probs=140.6
Q ss_pred cCCCCCCccccCCccceEEEEeC--CC--cEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--DG--SRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|++.+.||+|+||+||+|++. ++ ..||||+++... ....++|.+|+++|++++||||++++|+|..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~----- 82 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 82 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----
Confidence 46788899999999999999853 22 379999987542 2234689999999999999999999999841
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
...++|||||++|++.+++.. ....+++..++.++.|+|+||+|||+ .+|+||||||+||+++.++++||+
T Consensus 83 ----~~~~lv~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~ 153 (273)
T d1u46a_ 83 ----PPMKMVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIG 153 (273)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHH--HGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEEC
T ss_pred ----cchheeeeeecCcchhhhhhc--ccCCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeec
Confidence 236899999999999998875 23459999999999999999999999 799999999999999999999999
Q ss_pred CCCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 604 GYNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|||+++........ +.. +.++|||||||++|||+| |.
T Consensus 154 DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~ 212 (273)
T d1u46a_ 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212 (273)
T ss_dssp CCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred cchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCC
Confidence 99999876433211 233 889999999999999998 63
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-36 Score=306.68 Aligned_cols=179 Identities=23% Similarity=0.386 Sum_probs=148.5
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCc--EEEEEEeecc-cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS--RVSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||+||+|++. +|. .||||+++.. .....++|.+|+++|+++ +|||||+++|+|.
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-------- 81 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-------- 81 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE--------
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe--------
Confidence 56777899999999999999964 444 4788887643 333457899999999999 7999999999996
Q ss_pred CCCeEEEEEEccCCCCHhHHhhcc-------------CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDW-------------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.+...++||||+++|+|.++++.. .....++|.+++.++.|||+||.|||+ .+|+||||||+||
T Consensus 82 ~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NI 158 (309)
T d1fvra_ 82 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNI 158 (309)
T ss_dssp ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred cCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceE
Confidence 345689999999999999999753 124679999999999999999999999 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++.++.+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 159 L~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~ 223 (309)
T d1fvra_ 159 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 223 (309)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred EEcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcC
Confidence 9999999999999999765322211 334 89999999999999999973
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-36 Score=307.41 Aligned_cols=189 Identities=21% Similarity=0.317 Sum_probs=145.2
Q ss_pred CHHHHHHHhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceee
Q 006570 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSIL 513 (640)
Q Consensus 442 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~ 513 (640)
+..+++...++|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++.+.++ +|+||+.++
T Consensus 4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~ 83 (299)
T d1ywna1 4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 83 (299)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence 34555555678999999999999999999842 346899999975432 2345678888888777 689999999
Q ss_pred eEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCC
Q 006570 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (640)
Q Consensus 514 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 580 (640)
+++.. .+...++|||||++|+|.++++..+ ....+++.+++.++.||++||+|||+ .
T Consensus 84 ~~~~~-------~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~ 153 (299)
T d1ywna1 84 GACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---R 153 (299)
T ss_dssp EEECS-------TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred eeecc-------CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---C
Confidence 98752 3445899999999999999997532 13458999999999999999999999 7
Q ss_pred CeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 581 ~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||||||||+|||+++++.+||+|||+|+........ +.. +.++|||||||++|||+||.
T Consensus 154 ~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~ 233 (299)
T d1ywna1 154 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 233 (299)
T ss_dssp TCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCC
Confidence 9999999999999999999999999999765322110 334 89999999999999999873
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-36 Score=304.52 Aligned_cols=175 Identities=17% Similarity=0.295 Sum_probs=140.3
Q ss_pred hcCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|++.+.||+|+||+||+|++.. +..||||.++.... ...+.+.+|+++|++++|||||+++|++.
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------- 78 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------- 78 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-------
Confidence 4578888999999999999998542 34689998864332 23467999999999999999999999883
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
....++||||+++|+|.+++.. ....+++..++.++.|+++||+|||+ .+||||||||+||++++++.+||+|
T Consensus 79 --~~~~~iv~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~D 151 (273)
T d1mp8a_ 79 --ENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 151 (273)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC
T ss_pred --cCeEEEEEEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEcc
Confidence 2347999999999999998864 34568999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCCc------------------cCC-CCccceehhhHHHHHHhh
Q 006570 605 YNIPLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 605 fGla~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+|+........ ... +.++|||||||++|||+|
T Consensus 152 fG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt 204 (273)
T d1mp8a_ 152 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 204 (273)
T ss_dssp -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred chhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHh
Confidence 9999865422110 234 889999999999999998
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-36 Score=306.88 Aligned_cols=175 Identities=19% Similarity=0.389 Sum_probs=146.3
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCc----EEEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGS----RVSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||+||+|++. +|+ .||+|+++.. .....++|.+|++++++++|||||+++|+|..
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~------ 82 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 82 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES------
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence 35888999999999999999853 444 5889988643 34456889999999999999999999999862
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...+++|||+.+|+|.+++.. ....+++..++.|+.|||.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 83 ---~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~D 154 (317)
T d1xkka_ 83 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 154 (317)
T ss_dssp ---SSEEEEEECCTTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECC
T ss_pred ---CCeeEEEEeccCCcccccccc--cccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeec
Confidence 236899999999999998875 35678999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 605 YNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 605 fGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
||+|+........ +.. +.++|||||||++|||+|+
T Consensus 155 FGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~ 209 (317)
T d1xkka_ 155 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 209 (317)
T ss_dssp CSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHC
Confidence 9999865322111 334 8999999999999999983
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-36 Score=302.98 Aligned_cols=177 Identities=21% Similarity=0.385 Sum_probs=147.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+++.+|+++|++++|||||++++++. ++
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~--------~~ 73 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--------TE 73 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEE--------ET
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccc--------cc
Confidence 5788899999999999999994 679999999996543 234578999999999999999999999986 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+||||+.+ ++.+++.. .....+++..+..++.|++.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~iv~e~~~~-~~~~~~~~-~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~ 148 (298)
T d1gz8a_ 74 NKLYLVFEFLHQ-DLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGL 148 (298)
T ss_dssp TEEEEEEECCSE-EHHHHHHH-TTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTH
T ss_pred cceeEEEeecCC-chhhhhhh-hcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCc
Confidence 568999999976 55555543 335569999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ ... +.++||||+||++|||++|+
T Consensus 149 a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~ 200 (298)
T d1gz8a_ 149 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200 (298)
T ss_dssp HHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred ceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCC
Confidence 9765432211 223 78999999999999999995
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.5e-35 Score=297.61 Aligned_cols=180 Identities=16% Similarity=0.249 Sum_probs=151.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|++++++++||||+++++++.... ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~----~~ 82 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET----PA 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC----SS
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc----CC
Confidence 5688899999999999999994 57999999999754332 2357899999999999999999999886422 13
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++.+++.|+.|++.||+|||+ .+|+||||||+|||++.++..+++|||
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~ 156 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFG 156 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCT
T ss_pred CceEEEEEECCCCCEehhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhh
Confidence 3458999999999999999865 3468999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++........ +.. +.++|||||||++|||+||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~ 211 (277)
T d1o6ya_ 157 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 211 (277)
T ss_dssp TCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred hhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCC
Confidence 98754322110 334 88999999999999999994
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-36 Score=302.92 Aligned_cols=171 Identities=20% Similarity=0.305 Sum_probs=141.9
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccCC-----ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH-----LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||++++++. .+..
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~--------~~~~ 74 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG--------HKSN 74 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC--------CTTC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeec--------cCCc
Confidence 46899999999999995 56899999999754221 2357899999999999999999999985 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.|+||||+++|++..+.. ....+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+|+
T Consensus 75 ~~ivmE~~~~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~ 148 (299)
T d1ua2a_ 75 ISLVFDFMETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAK 148 (299)
T ss_dssp CEEEEECCSEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eeehhhhhcchHHhhhhh---cccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCcccc
Confidence 899999999887776664 35568999999999999999999999 799999999999999999999999999997
Q ss_pred cccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++|||||||++|||+||.
T Consensus 149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~ 198 (299)
T d1ua2a_ 149 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198 (299)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCc
Confidence 65432111 223 88999999999999999984
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-35 Score=304.50 Aligned_cols=178 Identities=19% Similarity=0.319 Sum_probs=147.3
Q ss_pred hcCCCCCC-ccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTN-LIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~-~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|.+.. .||+|+||+||+|+. .+++.||||+++. .+.+.+|++++.++ +|||||++++++.... ..
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~----~~ 80 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY----AG 80 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE----TT
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecc----cC
Confidence 35787764 699999999999994 6789999999863 35678899987655 8999999999875322 13
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~ 603 (640)
...+|+|||||++|+|.+++.. +....+++.++..|+.|++.||+|||+ .+|+||||||+|||+++ ++.+||+
T Consensus 81 ~~~~~ivmEy~~gg~L~~~i~~-~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~ 156 (335)
T d2ozaa1 81 RKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 156 (335)
T ss_dssp EEEEEEEEECCCSEEHHHHHHS-CSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEEC
T ss_pred CCEEEEEEECCCCCcHHHHHHh-cCCCCcCHHHHHHHHHHHHHHHHHHHH---cCCcccccccccccccccccccccccc
Confidence 4568999999999999999975 234569999999999999999999999 79999999999999986 4679999
Q ss_pred CCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+|+........ +.. +.++|||||||++|||+||.
T Consensus 157 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~ 210 (335)
T d2ozaa1 157 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 210 (335)
T ss_dssp CCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSS
T ss_pred ccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCC
Confidence 99999865432211 233 89999999999999999984
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-36 Score=305.11 Aligned_cols=181 Identities=16% Similarity=0.314 Sum_probs=151.4
Q ss_pred HhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
..++|+..+.||+|+||+||+|++. +++.||||+++.... .....|.+|++++++++||||++++|+|.
T Consensus 18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~---- 93 (308)
T d1p4oa_ 18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 93 (308)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC----
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe----
Confidence 3467788899999999999999853 357899999975432 23356899999999999999999999985
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhcc-------CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDW-------KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~-------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
.....++|||||++|+|.++++.. .....+++..+.+|+.|+|+||.|||+ .+|+||||||+|||+
T Consensus 94 ----~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLl 166 (308)
T d1p4oa_ 94 ----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV 166 (308)
T ss_dssp ----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEE
T ss_pred ----cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceee
Confidence 344589999999999999998742 123457999999999999999999999 699999999999999
Q ss_pred cCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 595 DKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++++||+|||+|+........ +.. +.++|||||||++|||+||.
T Consensus 167 d~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~ 232 (308)
T d1p4oa_ 167 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 232 (308)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred cCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCC
Confidence 99999999999999866432211 333 88999999999999999983
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.8e-35 Score=298.61 Aligned_cols=176 Identities=17% Similarity=0.325 Sum_probs=150.6
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||+||+|+.++|+.||||+++... ....+++.+|+.+|++++|||||++++++. ...
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~~~ 73 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH--------TKK 73 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE--------CSS
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecc--------cCC
Confidence 5788899999999999999998889999999996542 334578999999999999999999999886 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..+++|||+.++.+..+.+ ....+++..+..|+.|++.||+|||+ .+||||||||+|||++.++.+|++|||.+
T Consensus 74 ~~~i~~e~~~~~~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a 147 (286)
T d1ob3a_ 74 RLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLA 147 (286)
T ss_dssp CEEEEEECCSEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred ceeEEEEeehhhhHHHHHh---hcCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccc
Confidence 6899999998877766654 35679999999999999999999998 79999999999999999999999999998
Q ss_pred ccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... ... +.++||||+||++|||++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~ 198 (286)
T d1ob3a_ 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198 (286)
T ss_dssp HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred eecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCC
Confidence 765322111 223 89999999999999999985
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-35 Score=302.06 Aligned_cols=180 Identities=19% Similarity=0.246 Sum_probs=145.5
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
+|+..++||+|+||+||+|+. .+|+.||||+++.... ...+|+++|++++||||+++++++...... .....+
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~--~~~~~~ 94 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEK--KDEVYL 94 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--C--CSCCEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCcc--CCceEE
Confidence 477788999999999999995 5699999999975432 234799999999999999999998754332 244568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGla~ 609 (640)
++|||||++|.+..+.+.......+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++
T Consensus 95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~ 171 (350)
T d1q5ka_ 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171 (350)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchh
Confidence 9999999876444443322345679999999999999999999998 7999999999999999775 89999999997
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++||||+||++|||++|.
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~ 220 (350)
T d1q5ka_ 172 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220 (350)
T ss_dssp ECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTS
T ss_pred hccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCC
Confidence 65332211 233 89999999999999999984
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-35 Score=295.34 Aligned_cols=179 Identities=19% Similarity=0.365 Sum_probs=144.9
Q ss_pred hcCCCCCCccccCCccceEEEEeCC--------CcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|.+.+.||+|+||.||+|+... +..||||+++.... ....++.+|...+.++ +|||||+++++|.
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~-- 89 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 89 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc--
Confidence 4578888999999999999998422 34799999975432 2346788899999888 8999999999995
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++|||||++|+|.++++.... ...+++.+++.++.|++.||+|||+ .+|||||
T Consensus 90 ------~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrD 160 (299)
T d1fgka_ 90 ------QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRD 160 (299)
T ss_dssp ------SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred ------cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeee
Confidence 33458999999999999999975321 3468999999999999999999999 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+|||++.++.+||+|||+++........ +.. +.++|||||||++|||+|+
T Consensus 161 iKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~ 233 (299)
T d1fgka_ 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233 (299)
T ss_dssp CSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred ecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccC
Confidence 9999999999999999999999876432211 334 8999999999999999983
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-35 Score=297.67 Aligned_cols=179 Identities=21% Similarity=0.337 Sum_probs=151.0
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
.++|+..+.||+|+||.||+|++ .+++.||||+++.... ....++.+|+++++++ +|||||+++|+|.
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~---- 97 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT---- 97 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe----
Confidence 46778889999999999999974 2467899999975432 2345789999999999 6999999999985
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccC---------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWK---------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~---------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++|||||++|+|.++++... ....+++..+..++.||++||+|||+ ++|||||
T Consensus 98 ----~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrD 170 (311)
T d1t46a_ 98 ----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRD 170 (311)
T ss_dssp ----SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred ----eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeecc
Confidence 3455899999999999999997532 13368999999999999999999999 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhc
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+||+++.++.+|++|||+++........ ... +.++|||||||++|||+|+
T Consensus 171 LKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~ 243 (311)
T d1t46a_ 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243 (311)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhC
Confidence 9999999999999999999999876533221 344 9999999999999999984
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-35 Score=290.69 Aligned_cols=176 Identities=19% Similarity=0.268 Sum_probs=146.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC------CChHHHHHHHHHHhcCC--CcccceeeeEEEeccc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQ 521 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~ 521 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ....++.+|+++|++++ |||||++++++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~---- 79 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE---- 79 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE----
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEe----
Confidence 5688899999999999999994 5789999999975421 12245778999999986 899999999885
Q ss_pred CCCCCCCeEEEEEEccCC-CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-Cc
Q 006570 522 DHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LT 599 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~ 599 (640)
..+..++||||+.+ +++.+++.. ...+++.++..++.|+++||+|||+ .+|+||||||+|||++.+ +.
T Consensus 80 ----~~~~~~lv~e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~ 149 (273)
T d1xwsa_ 80 ----RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGE 149 (273)
T ss_dssp ----CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTE
T ss_pred ----eCCeEEEEEEeccCcchHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCe
Confidence 45678999999975 688888864 4568999999999999999999999 799999999999999865 79
Q ss_pred eEEeCCCCCccccCCCCc---------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL---------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~---------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+|+........ +.. +.++||||+||++|||+||.
T Consensus 150 vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~ 207 (273)
T d1xwsa_ 150 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 207 (273)
T ss_dssp EEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred EEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCC
Confidence 999999999765432211 222 67799999999999999984
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-34 Score=286.87 Aligned_cols=176 Identities=17% Similarity=0.294 Sum_probs=152.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+++.||||+++.... ...+++.+|+.+|+.++||||+++++++. ..
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~--------~~ 73 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH--------SD 73 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------CS
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccc--------cc
Confidence 5788899999999999999994 5789999999975432 33578899999999999999999999886 45
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+.++++..+++. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||.
T Consensus 74 ~~~~iv~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~ 147 (292)
T d1unla_ 74 KKLTLVFEFCDQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp SEEEEEEECCSEEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred cceeEEeeecccccccccccc---ccccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecch
Confidence 568999999999999888764 4568899999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ ... +.++||||+||++|||++|.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~ 199 (292)
T d1unla_ 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_dssp CEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTS
T ss_pred hhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCC
Confidence 9876433211 223 88999999999999999984
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-34 Score=290.41 Aligned_cols=184 Identities=14% Similarity=0.280 Sum_probs=146.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||++... .....+++.+|+++|++++||||+++++++...........
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~ 89 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 89 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence 6788899999999999999995 57999999998644 23345788999999999999999999999864322222234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++++.+..+.. ....++...++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 90 ~~~~iv~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 90 GSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp -CEEEEEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCCCccchhhh---cccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecce
Confidence 56899999998876665543 35568899999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCCCc---------------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL---------------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~---------------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ +. . +.++||||+||++|||++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~ 219 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 219 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCC
Confidence 9755321110 22 3 89999999999999999984
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-34 Score=294.12 Aligned_cols=179 Identities=16% Similarity=0.285 Sum_probs=143.4
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|++.+.||+|+||+||+|+ ..+|+.||||+++.... ...+++.+|+++|++++||||+++++++..... ....
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~---~~~~ 84 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI---EQMK 84 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST---TTCC
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccc---cccc
Confidence 468889999999999999998 46799999999975332 234678899999999999999999999853211 1222
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
.++++||+.+|+|.+++.. ..+++..++.++.|++.||+|||+ .+||||||||+|||++.++.+||+|||++
T Consensus 85 -~~~l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a 156 (345)
T d1pmea_ 85 -DVYLVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLA 156 (345)
T ss_dssp -CEEEEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred -eEEEEEeecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCce
Confidence 3445566779999999964 358999999999999999999999 79999999999999999999999999999
Q ss_pred ccccCCCCc---------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL---------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~---------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ ... +.++||||+||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~ 210 (345)
T d1pmea_ 157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 210 (345)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCC
Confidence 754321110 223 78899999999999999984
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-33 Score=286.97 Aligned_cols=183 Identities=20% Similarity=0.331 Sum_probs=147.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CC-CcEEEEEEeeccc--CCChHHHHHHHHHHhcC---CCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TD-GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~~ 522 (640)
.++|++.+.||+|+||+||+|+. .+ ++.||||+++... ......+.+|+++|+.+ +||||+++++++.....
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~- 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT- 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC-
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc-
Confidence 46899999999999999999985 34 6679999997542 22334567788777665 89999999999864322
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+.....+++|||+++|++..... .....+++..+..++.|++.||+|||+ .+||||||||+|||+++++.+||
T Consensus 85 --~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl 157 (305)
T d1blxa_ 85 --DRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL 157 (305)
T ss_dssp --SSEEEEEEEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred --ccCceEEEEEEeccCCchhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeee
Confidence 23456899999998877655443 345668999999999999999999999 79999999999999999999999
Q ss_pred eCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ +.. +.++||||+||++|||+||+
T Consensus 158 ~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~ 212 (305)
T d1blxa_ 158 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 212 (305)
T ss_dssp CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCC
Confidence 999999865332211 344 99999999999999999985
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-33 Score=291.08 Aligned_cols=181 Identities=15% Similarity=0.299 Sum_probs=145.2
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++... +....
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~--~~~~~ 94 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD--ETLDD 94 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSC--SSTTT
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccC--ccccc
Confidence 45788899999999999999994 5699999999975322 2245788999999999999999999998632 21223
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+ +++|..+++. ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+|++|||
T Consensus 95 ~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg 166 (346)
T d1cm8a_ 95 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 166 (346)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred cceEEEEEecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhccccccccccccc
Confidence 44679999999 5588887753 459999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+......+. + .. +.++||||+||++|||++|.
T Consensus 167 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~ 216 (346)
T d1cm8a_ 167 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 216 (346)
T ss_dssp TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCc
Confidence 99876543322 2 23 89999999999999999984
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=3.9e-34 Score=292.74 Aligned_cols=176 Identities=19% Similarity=0.269 Sum_probs=147.9
Q ss_pred cCCCCCCccccCCccceEEEEe----CCCcEEEEEEeecc----cCCChHHHHHHHHHHhcCCC-cccceeeeEEEeccc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLK----QRHLPQSLMQHVELLSKLRH-RHLVSILGHCILTYQ 521 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~ 521 (640)
++|+..+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|++++++++| |||+++++++.
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~---- 99 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ---- 99 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE----
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeec----
Confidence 5688899999999999999984 24789999998643 22345778899999999976 89999998875
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
+....++||||+.+|+|.+++.. ...++......++.|++.||+|+|+ .+|+||||||+|||++.++.+|
T Consensus 100 ----~~~~~~~v~e~~~~~~L~~~i~~---~~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vk 169 (322)
T d1vzoa_ 100 ----TETKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVV 169 (322)
T ss_dssp ----ETTEEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEE
T ss_pred ----cCCceeeeeecccccHHHHHHHh---cccccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEE
Confidence 34568999999999999999975 3456788999999999999999999 7999999999999999999999
Q ss_pred EeCCCCCccccCCCCc------------------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNTL------------------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~~------------------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++........ . .. +.++||||+||+||||+||.
T Consensus 170 L~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~ 229 (322)
T d1vzoa_ 170 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 229 (322)
T ss_dssp ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred EeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCC
Confidence 9999999765322111 1 22 77999999999999999985
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.98 E-value=5.6e-33 Score=285.88 Aligned_cols=172 Identities=15% Similarity=0.273 Sum_probs=146.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+++|++++ ||||+++++++.. ....
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~------~~~~ 105 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD------PVSR 105 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC------TTTC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEe------cCCC
Confidence 5788999999999999999995 57899999998743 3578999999999995 9999999998752 1335
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGl 607 (640)
..++|||||++|+|.++. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+|||+
T Consensus 106 ~~~~v~e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~ 176 (328)
T d3bqca1 106 TPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176 (328)
T ss_dssp SEEEEEECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGG
T ss_pred ceeEEEeecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeeccccc
Confidence 689999999999997764 248999999999999999999999 7999999999999998654 699999999
Q ss_pred CccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+........ + .. +.++||||+||+++||++|+
T Consensus 177 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~ 227 (328)
T d3bqca1 177 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227 (328)
T ss_dssp CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred ceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCC
Confidence 9765432211 2 23 88999999999999999985
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-32 Score=285.84 Aligned_cols=181 Identities=16% Similarity=0.289 Sum_probs=146.2
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|++.+.||+|+||+||+|+ ..+|+.||||+++..... ..+++.+|+++|++++|||+|++++++.... .. +
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~--~~-~ 93 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR--SL-E 93 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS--ST-T
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecc--cc-c
Confidence 4578889999999999999999 467999999999754322 2357889999999999999999999875321 11 1
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....+++|||+.+|+|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|++|||
T Consensus 94 ~~~~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg 166 (348)
T d2gfsa1 94 EFNDVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 166 (348)
T ss_dssp TCCCCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC-
T ss_pred cCceEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccc
Confidence 2234566778889999999953 459999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... + .. +.++||||+||++|||++|.
T Consensus 167 ~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~ 216 (348)
T d2gfsa1 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216 (348)
T ss_dssp ---CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred hhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCC
Confidence 99776443222 2 23 88999999999999999984
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=4.1e-32 Score=274.37 Aligned_cols=174 Identities=16% Similarity=0.148 Sum_probs=145.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC-cccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH-RHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|++.+.||+|+||+||+|+. .+|+.||||++.... ..+++.+|++.++.++| +|++.+++++. .+.
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--------~~~ 74 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ--------EGL 74 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE--------ETT
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEee--------cCC
Confidence 5788899999999999999994 568999999886533 23567889999999965 89999988774 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-----CCceEEe
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-----ALTAKLS 603 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-----~~~~kl~ 603 (640)
..++||||+ +|+|.++++. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 75 ~~~~vme~~-~~~l~~~~~~--~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~ 148 (293)
T d1csna_ 75 HNVLVIDLL-GPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVV 148 (293)
T ss_dssp EEEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred ccEEEEEec-CCCHHHHHHh--hccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEc
Confidence 689999999 6899999875 34468999999999999999999999 79999999999999975 5789999
Q ss_pred CCCCCccccCCC---------------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRN---------------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~---------------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+|+...... +. +.. +.++|||||||++|||+||+
T Consensus 149 DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~ 210 (293)
T d1csna_ 149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 210 (293)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCC
Confidence 999998653211 00 334 89999999999999999985
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=2.8e-32 Score=276.81 Aligned_cols=175 Identities=16% Similarity=0.258 Sum_probs=143.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|++.+.||+|+||+||+|+. .+|+.||||++..... .+++.+|++++++++|+|++..++.+.. .+..
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~-------~~~~ 77 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA-------EGDY 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEE-------ETTE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEe-------cCCE
Confidence 4688899999999999999984 5689999999875432 3568899999999998887777766642 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSGYN 606 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~DfG 606 (640)
.++||||+ +|++.+.+.. ....+++..+..++.|++.||+|||+ .+||||||||+|||++. +..+||+|||
T Consensus 78 ~~ivme~~-~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG 151 (299)
T d1ckia_ 78 NVMVMELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 151 (299)
T ss_dssp EEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCS
T ss_pred EEEEEEEc-CCchhhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccC
Confidence 89999999 5577776653 34568999999999999999999999 79999999999998754 5679999999
Q ss_pred CCccccCCCC---------------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT---------------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~---------------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+....... . +.. +.++|||||||++|||+||.
T Consensus 152 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~ 210 (299)
T d1ckia_ 152 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 210 (299)
T ss_dssp SCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCC
Confidence 9986543211 0 334 89999999999999999984
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-31 Score=278.69 Aligned_cols=179 Identities=17% Similarity=0.272 Sum_probs=142.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+++.+|+.++++++||||+++++++.... ..+..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~--~~~~~ 94 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK--TLEEF 94 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC--STTTC
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccc--ccccC
Confidence 5788899999999999999995 4699999999975432 22356889999999999999999999886322 22345
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+|||||.+ ++.+.+. ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+|++|||+
T Consensus 95 ~~~~iv~Ey~~~-~l~~~~~-----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~ 165 (355)
T d2b1pa1 95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_dssp CEEEEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred ceeEEEEeccch-HHHHhhh-----cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhh
Confidence 789999999976 4555553 347899999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ +.. ++++||||+||+++||++|.
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~ 215 (355)
T d2b1pa1 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215 (355)
T ss_dssp ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred hhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCC
Confidence 8765432211 334 99999999999999999984
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=4.2e-30 Score=262.48 Aligned_cols=228 Identities=24% Similarity=0.331 Sum_probs=211.3
Q ss_pred cccccccCccCCCC--hhhhhhcCCCCCcEeeccc-CcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 006570 101 SASQQSLSANFNID--RFFTILTKLSNLKVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 101 ~l~~l~l~~n~~~~--~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
.++.|+|++|.+.+ .+|..+++|++|++|+|++ |+++|.+|..|++|++|++|+|++|++.+..|..+..+.+|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 68889999998887 4789999999999999997 89999999999999999999999999999999999999999999
Q ss_pred EccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccc-cceeecccCcccccCCccccCCCCccEEEccCCcc
Q 006570 178 VLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKN-IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNF 252 (640)
Q Consensus 178 ~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~-L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 252 (640)
++++|.+.+.+|. +.+++.|+++++++|.+++.+|.. +.+ ++.+++++|++++..|..+.++..+ .+++++|.+
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 9999999998886 999999999999999999988875 333 4789999999999999999888655 799999999
Q ss_pred cCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccCC
Q 006570 253 VGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330 (640)
Q Consensus 253 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~~ 330 (640)
.+.+|..+..+++|+.+++++|.+++.+| .+..+++|+.|+|++|+|+|.+|..++++++|+.|++++|+++|.+|.
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC
Confidence 99999999999999999999999998665 688899999999999999999999999999999999999999998763
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=2.2e-27 Score=247.26 Aligned_cols=180 Identities=14% Similarity=0.140 Sum_probs=140.6
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-----------CcccceeeeEEEec
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----------HRHLVSILGHCILT 519 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~~~ 519 (640)
+|++.+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 488899999999999999995 579999999997542 22467788998888775 57899999887532
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL- 598 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~- 598 (640)
.....+++|+++..+..............+++..+..++.|++.||+|||+. .+|+||||||+|||++.++
T Consensus 93 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~ 164 (362)
T d1q8ya_ 93 ------GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDS 164 (362)
T ss_dssp ------ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEET
T ss_pred ------cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCc
Confidence 2234667777766554443333334566789999999999999999999974 6899999999999998764
Q ss_pred -----ceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 -----TAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 -----~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+|++|||.+......... ... +.++||||+||+++||++|.
T Consensus 165 ~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~ 226 (362)
T d1q8ya_ 165 PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226 (362)
T ss_dssp TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCC
Confidence 4899999999765432221 333 89999999999999999984
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.93 E-value=1.6e-25 Score=227.28 Aligned_cols=222 Identities=18% Similarity=0.180 Sum_probs=170.5
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
+.+++|+|++|.+....+.+|.++++|++|++++|.+....|..|.++++|++|++++|+++ .+|..+. ..|+.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~~--~~l~~L~~ 107 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 107 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-cCccchh--hhhhhhhc
Confidence 57888999999887766678889999999999999988777888889999999999999888 5665443 57788888
Q ss_pred cCccCCccCC---------------------------CccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccC
Q 006570 180 ADNLLNGSVP---------------------------DLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEI 232 (640)
Q Consensus 180 ~~N~l~~~~~---------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~ 232 (640)
++|.+.+..+ .+..+++|+++++++|+++......+++|+.|++++|..++..
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~ 187 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 187 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred cccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCC
Confidence 8887775443 1556677888888888876654455778888888888888777
Q ss_pred CccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCc----
Q 006570 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI---- 308 (640)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~---- 308 (640)
+..|.+++.++.|++++|++++..+..+.++++|++|+|++|+|+. +|..+..+++|++|+|++|+|+...+..|
T Consensus 188 ~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~ 266 (305)
T d1xkua_ 188 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 266 (305)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred hhHhhccccccccccccccccccccccccccccceeeecccccccc-cccccccccCCCEEECCCCccCccChhhccCcc
Confidence 7888888888888888888887777778888888888888888864 57778888888888888888875433232
Q ss_pred --cCCCCCceeeecccccc
Q 006570 309 --GSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 309 --~~~~~l~~l~l~~N~l~ 325 (640)
....+++.+++++|.++
T Consensus 267 ~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 267 YNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CCTTSCCCSEEECCSSSSC
T ss_pred hhcccCCCCEEECCCCcCc
Confidence 34566777888887765
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.1e-25 Score=226.14 Aligned_cols=201 Identities=16% Similarity=0.107 Sum_probs=119.7
Q ss_pred CcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc-CccCCccCCC-ccCcCcCCeeEcc
Q 006570 126 LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA-DNLLNGSVPD-LQRLVLLEELNLG 203 (640)
Q Consensus 126 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~-~N~l~~~~~~-~~~l~~L~~L~L~ 203 (640)
+++|+|++|+|++..+..|.++++|++|++++|.+....+..+.+++.++.+... .|.++...+. |.++++|++|+++
T Consensus 34 ~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~ 113 (284)
T d1ozna_ 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLD 113 (284)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECT
T ss_pred CCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEecC
Confidence 4555555555544333445555555555555555554444445555555555433 3334444343 5555555555555
Q ss_pred CCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccC
Q 006570 204 GNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280 (640)
Q Consensus 204 ~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 280 (640)
+|.+....+.. ..+|+.+++++|++++..+..|..+++|+.|+|++|+|++..+..|.++++|+++++++|++++..
T Consensus 114 ~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~ 193 (284)
T d1ozna_ 114 RCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193 (284)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccC
Confidence 55554333322 345555556666665555556666667777777777776666666667777777777777777666
Q ss_pred CccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 281 PVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 281 p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
|..|..+++|++||+++|++.+..|..|..+++|+.+++++|.+..
T Consensus 194 ~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred hhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 6777777777777777777776666666677777777777776654
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2.6e-25 Score=223.36 Aligned_cols=231 Identities=18% Similarity=0.137 Sum_probs=197.5
Q ss_pred cEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCC
Q 006570 69 KIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFW 148 (640)
Q Consensus 69 gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 148 (640)
++.|.+..-..++.++.+++.. |..-...+++|+|++|.+....+.+|.++++|++|++++|.+....+..+..+.
T Consensus 5 ~C~C~~~~~~~v~c~~~~L~~i----P~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~ 80 (284)
T d1ozna_ 5 ACVCYNEPKVTTSCPQQGLQAV----PVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (284)
T ss_dssp TCEEECSSSCEEECCSSCCSSC----CTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CCEEcCCCCeEEEcCCCCCCcc----CCCCCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccc
Confidence 3566432222334555555322 111225789999999999877778899999999999999999888888899999
Q ss_pred CCCEEEcc-cCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeec
Q 006570 149 SLEVLNIS-SNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVIL 223 (640)
Q Consensus 149 ~L~~L~Ls-~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l 223 (640)
.++.++.. .|.++...|..|.++++|++|++++|.+....+. +..+.+|+.+++++|+|++..+.. .++|+.|++
T Consensus 81 ~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l 160 (284)
T d1ozna_ 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (284)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhccc
Confidence 99999875 6677766688899999999999999999988776 888999999999999999877654 578999999
Q ss_pred ccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCccc
Q 006570 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~ 303 (640)
++|++++..|..|.++++|+.|++++|++++..|..|..+++|++|++++|++++..|..|..+++|++|++++|.+...
T Consensus 161 ~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~ 240 (284)
T d1ozna_ 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (284)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred ccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCC
Confidence 99999998899999999999999999999999999999999999999999999998888999999999999999999854
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.8e-24 Score=214.83 Aligned_cols=200 Identities=18% Similarity=0.149 Sum_probs=150.4
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCee
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEEL 200 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 200 (640)
.+.+.+...+.++++++ .+|+.+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+.+ |.+..+++|++|
T Consensus 7 ~~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~~~~~l~~L~~L 82 (266)
T d1p9ag_ 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVDGTLPVLGTL 82 (266)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECCSCCTTCCEE
T ss_pred cccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-cccccccccccc
Confidence 34455566677777775 4666554 4677777777777755556677777777777777777754 345667777777
Q ss_pred EccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 201 NLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 201 ~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
+|++|+++...+.. +++|+.|++++|.+.+..+..+..+.+++.|++++|.+++..+..+..+++|+.|++++|+|++
T Consensus 83 ~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 83 DLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp ECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ccccccccccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccc
Confidence 77777776554432 5677777888888777777777888888888888888887777777888888888888888888
Q ss_pred cCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 279 ALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 279 ~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
..+..|..+++|++|||++|+|+ .+|..+..+++|+.|++++|.+.
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 77777888888888888888888 67877888888888888888664
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.8e-24 Score=212.56 Aligned_cols=174 Identities=20% Similarity=0.175 Sum_probs=123.7
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccC
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGG 204 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~ 204 (640)
+|++|+|++|.|++..+..|.++++|++|+|++|+|+ .+| .++.+++|++|+|++|++++.++.+..+++|++|++++
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~ 109 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSF 109 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCS
T ss_pred CCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-cccccccccccccccccccccccccccccccccccccc
Confidence 4566666666665444455666666666666666665 333 24556666666666666666555566666666666666
Q ss_pred CCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCC
Q 006570 205 NDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281 (640)
Q Consensus 205 N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 281 (640)
|.+....+.. +.+++.|++++|.++...+..+..+++|+.|++++|+|++..+..|..+++|++|+|++|+|+ .+|
T Consensus 110 ~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp 188 (266)
T d1p9ag_ 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (266)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred cccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccC
Confidence 6665544433 456667777777777666677778888999999999998888888888899999999999987 578
Q ss_pred ccccCCCCCCEEeccCccCc
Q 006570 282 VNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 282 ~~~~~~~~L~~L~ls~N~l~ 301 (640)
..+..+++|+.|+|++|.+.
T Consensus 189 ~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 189 KGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTTCCCSEEECCSCCBC
T ss_pred hhHCCCCCCCEEEecCCCCC
Confidence 77888888999999998775
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=1e-23 Score=198.43 Aligned_cols=154 Identities=15% Similarity=0.124 Sum_probs=118.3
Q ss_pred CCCccccCCccceEEEEeCCCcEEEEEEeecccCC------------------ChHHHHHHHHHHhcCCCcccceeeeEE
Q 006570 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH------------------LPQSLMQHVELLSKLRHRHLVSILGHC 516 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~h~niv~l~g~~ 516 (640)
+.+.||+|+||+||+|+..+|+.||||+++..... ......+|.+.+.++.|++++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 45789999999999999888999999987532110 012345688899999999999887653
Q ss_pred EecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC
Q 006570 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK 596 (640)
Q Consensus 517 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~ 596 (640)
. .+++|||++++.+.+ +++.....++.|++++++|||+ .+|+||||||+|||+++
T Consensus 84 ~------------~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~ 138 (191)
T d1zara2 84 G------------NAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSE 138 (191)
T ss_dssp T------------TEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEET
T ss_pred C------------CEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeC
Confidence 1 379999998865433 2334456799999999999999 79999999999999986
Q ss_pred CCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHH
Q 006570 597 ALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIIC 634 (640)
Q Consensus 597 ~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ 634 (640)
+ .++|+|||.|.....+... .+. +.++|+||..--++
T Consensus 139 ~-~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~~ 190 (191)
T d1zara2 139 E-GIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRIL 190 (191)
T ss_dssp T-EEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred C-CEEEEECCCcccCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHh
Confidence 5 4899999999776543321 234 88999999865554
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.88 E-value=5e-22 Score=201.16 Aligned_cols=199 Identities=19% Similarity=0.222 Sum_probs=173.1
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEcc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLG 203 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~ 203 (640)
++|++|+|++|+|+...+..|.++++|++|++++|.+....|..|.++++|++|++++|+|+..++.+ ...|+.|+++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~--~~~l~~L~~~ 108 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM--PKTLQELRVH 108 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC--CTTCCEEECC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccch--hhhhhhhhcc
Confidence 57999999999997665668999999999999999999777889999999999999999999877653 3578888888
Q ss_pred CCCCCCCCCC-----------------------------cccccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 204 GNDFGPKFPS-----------------------------LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 204 ~N~l~~~~~~-----------------------------~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
+|.+.+..+. .+++|+.+++++|.++ .+|..+ +++|+.|++++|.+++
T Consensus 109 ~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~ 185 (305)
T d1xkua_ 109 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITK 185 (305)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCE
T ss_pred ccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCC
Confidence 8887532210 1357888999999997 456544 5789999999999999
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
..+..|.+++.++.|++++|++++..|..+..+++|++|+|++|+|+ .+|..+..+++|+.|++++|+++...
T Consensus 186 ~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~ 258 (305)
T d1xkua_ 186 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIG 258 (305)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccC
Confidence 99999999999999999999999988999999999999999999998 57889999999999999999999754
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.87 E-value=1.1e-21 Score=204.70 Aligned_cols=241 Identities=21% Similarity=0.199 Sum_probs=142.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
..++.|++++++++. +.. .-..++|++|+|++|.+.+.. .++++++|++|++++|.+.+. + .++.+++|+.|+
T Consensus 44 ~~l~~L~l~~~~I~~-l~g--l~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~ 116 (384)
T d2omza2 44 DQVTTLQADRLGIKS-IDG--VEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLT 116 (384)
T ss_dssp TTCCEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCC-ccc--cccCCCCCEEeCcCCcCCCCc--cccCCcccccccccccccccc-c-cccccccccccc
Confidence 356677777666532 111 112356777777777665543 267777777777777777543 2 266677777777
Q ss_pred cccCcccccC---------------------------------------------------------------CccccCC
Q 006570 155 ISSNFIYGEI---------------------------------------------------------------PMEITSL 171 (640)
Q Consensus 155 Ls~N~l~~~~---------------------------------------------------------------p~~~~~l 171 (640)
+++|.+++.. +..+..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (384)
T d2omza2 117 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKL 196 (384)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccc
Confidence 7666655311 0123344
Q ss_pred CCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-CcccccceeecccCcccccCCccccCCCCccEEEccCC
Q 006570 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN 250 (640)
Q Consensus 172 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 250 (640)
++++.+++++|.+++..| +..+++|++|++++|+++.... ..+++|+.|++++|.+++..| +..+++|+.|++++|
T Consensus 197 ~~~~~l~l~~n~i~~~~~-~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~ 273 (384)
T d2omza2 197 TNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 273 (384)
T ss_dssp TTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred cccceeeccCCccCCCCc-ccccCCCCEEECCCCCCCCcchhhcccccchhccccCccCCCCc--ccccccCCEeeccCc
Confidence 555555666655555433 3334445555555555443211 113444444444444443221 334444444444444
Q ss_pred cccCcC--------------------CccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccC
Q 006570 251 NFVGPI--------------------QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGS 310 (640)
Q Consensus 251 ~l~~~~--------------------p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~ 310 (640)
++++.. ...+..+++++.|++++|++++..| +..+++|+.|++++|+|++ +| .+..
T Consensus 274 ~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~-l~-~l~~ 349 (384)
T d2omza2 274 QISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-VS-SLAN 349 (384)
T ss_dssp CCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGG
T ss_pred ccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCC-Ch-hHcC
Confidence 443221 1346778889999999999987533 7788999999999999885 44 5888
Q ss_pred CCCCceeeeccccccCccC
Q 006570 311 NSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 311 ~~~l~~l~l~~N~l~~~~~ 329 (640)
+++|+.|++++|++++..|
T Consensus 350 l~~L~~L~l~~N~l~~l~~ 368 (384)
T d2omza2 350 LTNINWLSAGHNQISDLTP 368 (384)
T ss_dssp CTTCCEEECCSSCCCBCGG
T ss_pred CCCCCEEECCCCcCCCChh
Confidence 9999999999999987654
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.84 E-value=2e-20 Score=195.06 Aligned_cols=217 Identities=21% Similarity=0.223 Sum_probs=180.4
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
.+++.|+++++.+... +.+..|++|++|+|++|+|++ +| .++++++|++|++++|.+.+. + .++++++|+.|++
T Consensus 44 ~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~~ 117 (384)
T d2omza2 44 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTL 117 (384)
T ss_dssp TTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCC-Cc-cccCCcccccccccccccccc-c-ccccccccccccc
Confidence 4788999999988653 358899999999999999976 44 399999999999999999954 3 3889999999999
Q ss_pred cCccCCccCC----------------------------------------------------------------CccCcC
Q 006570 180 ADNLLNGSVP----------------------------------------------------------------DLQRLV 195 (640)
Q Consensus 180 ~~N~l~~~~~----------------------------------------------------------------~~~~l~ 195 (640)
++|.+++..+ .+..++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (384)
T d2omza2 118 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLT 197 (384)
T ss_dssp CSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 9998875322 144567
Q ss_pred cCCeeEccCCCCCCCCCCc-ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCC
Q 006570 196 LLEELNLGGNDFGPKFPSL-SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274 (640)
Q Consensus 196 ~L~~L~L~~N~l~~~~~~~-~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 274 (640)
+++.+++++|.+++..|.. .++|+.|++++|+++. + +.+..+++|+.|++++|.+++..+ +..+++|+.|++++|
T Consensus 198 ~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~ 273 (384)
T d2omza2 198 NLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 273 (384)
T ss_dssp TCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred ccceeeccCCccCCCCcccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeeccCc
Confidence 8999999999999877654 6899999999999984 3 468899999999999999997543 788999999999999
Q ss_pred cCCccCC--------------------ccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 275 QLSEALP--------------------VNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 275 ~l~~~~p--------------------~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++++..+ ..+..+++++.|++++|++++..| +..+++|+.|++++|.+++..
T Consensus 274 ~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~l~ 345 (384)
T d2omza2 274 QISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVS 345 (384)
T ss_dssp CCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCG
T ss_pred ccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCCCh
Confidence 9876432 234566889999999999997543 788999999999999998753
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.81 E-value=6.9e-20 Score=176.88 Aligned_cols=204 Identities=18% Similarity=0.196 Sum_probs=166.7
Q ss_pred cccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc
Q 006570 103 SQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182 (640)
Q Consensus 103 ~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 182 (640)
..++++.+.+.+.. .++.|.+|+.|++.+|+++. ++ .+..+++|++|+|++|.+++..| +..+++|+++++++|
T Consensus 22 ~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n 95 (227)
T d1h6ua2 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (227)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccccccc
Confidence 34566666665543 45678899999999999964 54 58999999999999999985544 889999999999999
Q ss_pred cCCccCCCccCcCcCCeeEccCCCCCCCCCC-cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcccc
Q 006570 183 LLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261 (640)
Q Consensus 183 ~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 261 (640)
.++. ++.+.++++|+++++++|...+..+- ..+.+..+.++++.+... ..+.++++|+.|++++|.+++.. .+.
T Consensus 96 ~~~~-i~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~--~l~ 170 (227)
T d1h6ua2 96 PLKN-VSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT--PLA 170 (227)
T ss_dssp CCSC-CGGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG--GGT
T ss_pred cccc-cccccccccccccccccccccccchhccccchhhhhchhhhhchh--hhhccccccccccccccccccch--hhc
Confidence 9885 45688999999999999998766543 367888999999998753 34778899999999999998543 388
Q ss_pred CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecc
Q 006570 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321 (640)
Q Consensus 262 ~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~ 321 (640)
++++|++|+|++|++++ +|. +..+++|++|++++|++++. | .+.++++|+.|++++
T Consensus 171 ~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 171 NLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLTN 226 (227)
T ss_dssp TCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEEE
T ss_pred ccccceecccCCCccCC-Chh-hcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEeeC
Confidence 99999999999999987 443 88899999999999999864 4 388999999999863
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=6.1e-19 Score=171.77 Aligned_cols=194 Identities=16% Similarity=0.076 Sum_probs=102.4
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCc-cccCCCCCCEEEccC-ccCCccCCC-ccCcCcCCeeE
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLAD-NLLNGSVPD-LQRLVLLEELN 201 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~-N~l~~~~~~-~~~l~~L~~L~ 201 (640)
++++|+|++|.++...+..|.++++|++|+|++|.+...+|. .|.+++++++|.+.. |.+....+. |.++++|++|+
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 445555555555433333455555555555555555443332 345555555555432 444444444 45555555555
Q ss_pred ccCCCCCCCCCCc----ccccceeecccCcccccCCccccCCC-CccEEEccCCcccCcCCccccCCCCCcEE-EccCCc
Q 006570 202 LGGNDFGPKFPSL----SKNIVSVILRNNSLRSEIPSGLKNFD-QLKQFDISSNNFVGPIQSFLFSLPSILYL-NLAGNQ 275 (640)
Q Consensus 202 L~~N~l~~~~~~~----~~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~l~~N~ 275 (640)
+++|++....+.. +..+..+..+++.+....+..|..++ .++.|++++|+++...+. ....+++..+ ++++|+
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~-~~~~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNC-AFNGTQLDELNLSDNNN 188 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTT-TTTTCCEEEEECTTCTT
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccc-cccchhhhccccccccc
Confidence 5555554322211 23334444455555544455555543 566677777777643333 3334444433 456666
Q ss_pred CCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeee
Q 006570 276 LSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVS 319 (640)
Q Consensus 276 l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l 319 (640)
++...+..|..+++|+.|++++|+|+...+..|.+++.|+.+++
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred cccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 76544445666777777777777776544455666666665554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=2.3e-19 Score=174.80 Aligned_cols=197 Identities=11% Similarity=0.033 Sum_probs=158.5
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCC-ccccCCCCCCEEEccc-CcccccCCccccCCCCCCEE
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP-SKINRFWSLEVLNISS-NFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 177 (640)
..+++|+|++|.+....+.+|.++++|++|+|++|.+...+| ..|.+++++++|++.. |.+....+..|.++++|+.|
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 478999999999977667789999999999999999977654 5789999999999874 78887888889999999999
Q ss_pred EccCccCCccCCC--ccCcCcCCeeEccCCCCCCCCCCc----ccccceeecccCcccccCCccccCCCCccEE-EccCC
Q 006570 178 VLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSL----SKNIVSVILRNNSLRSEIPSGLKNFDQLKQF-DISSN 250 (640)
Q Consensus 178 ~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L-~Ls~N 250 (640)
++++|.+....+. +..+..|+.+..+++++....+.. ...++.|++++|+++...+. ..+..+++.+ ++++|
T Consensus 109 ~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~-~~~~~~l~~~~~l~~n 187 (242)
T d1xwdc1 109 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNC-AFNGTQLDELNLSDNN 187 (242)
T ss_dssp EEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTT-TTTTCCEEEEECTTCT
T ss_pred ccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccc-cccchhhhcccccccc
Confidence 9999999875543 556677777788888886544443 35788899999999965444 4455665555 67888
Q ss_pred cccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccC
Q 006570 251 NFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (640)
Q Consensus 251 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~ 297 (640)
+++...+..|.++++|++|+|++|+|+...+..|.++++|+.+++.+
T Consensus 188 ~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp TCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred ccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 99866666789999999999999999876666788888887776654
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.79 E-value=8.1e-19 Score=169.22 Aligned_cols=185 Identities=21% Similarity=0.242 Sum_probs=152.8
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
.+++.|++.+|.+.. + ..+.++++|++|+|++|.+++..| +..+++|++|++++|.++ .++ .+.++++|+.+++
T Consensus 41 ~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 41 DGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEEC
T ss_pred CCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccccccc
Confidence 456666666666654 3 348899999999999999976443 899999999999999988 454 5889999999999
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCC-cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCc
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 258 (640)
++|...+.. .+...+.++.+.++++.+....+- ..++|+.|++++|.++.. ..++++++|+.|+|++|++++ +|
T Consensus 115 ~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~-l~- 189 (227)
T d1h6ua2 115 TSTQITDVT-PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISD-IS- 189 (227)
T ss_dssp TTSCCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CG-
T ss_pred ccccccccc-hhccccchhhhhchhhhhchhhhhccccccccccccccccccc--hhhcccccceecccCCCccCC-Ch-
Confidence 999987653 367788999999999998765543 378899999999999753 348899999999999999986 44
Q ss_pred cccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccC
Q 006570 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297 (640)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~ 297 (640)
.+.++++|++|+|++|++++. | .+.++++|+.|++++
T Consensus 190 ~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 190 PLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLTN 226 (227)
T ss_dssp GGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEEE
T ss_pred hhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEeeC
Confidence 388999999999999999874 4 388999999999974
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.78 E-value=4.4e-19 Score=168.90 Aligned_cols=178 Identities=20% Similarity=0.233 Sum_probs=95.0
Q ss_pred ccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCC
Q 006570 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLN 185 (640)
Q Consensus 106 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 185 (640)
++..+.+.+.++. ..+.+|+.|++++|.++. ++ .+..+++|++|+|++|+|++ ++ .++++++|++|++++|+|+
T Consensus 30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC
T ss_pred HhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc
Confidence 4444444443332 245667777777777754 33 36677777777777777774 33 3567777777777777777
Q ss_pred ccCCCccCcCcCCeeEccCCCCCCCCCC-cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCC
Q 006570 186 GSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLP 264 (640)
Q Consensus 186 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 264 (640)
+. |.+.++++|+.|++++|.+....+- .+++++.+++++|.+++ +..+..+++|+.+++++|++++. + .+.+++
T Consensus 104 ~l-~~l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l~ 178 (210)
T d1h6ta2 104 DL-SSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-PLAGLT 178 (210)
T ss_dssp CG-GGGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-GGTTCT
T ss_pred cc-ccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc-c-cccCCC
Confidence 64 3567777777777777766432110 13344444444444432 12233444444444444444432 1 144444
Q ss_pred CCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 265 SILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 265 ~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
+|+.|+|++|+|+. +| .+..+++|++|+|+
T Consensus 179 ~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 179 KLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp TCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred CCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence 44444444444433 22 24444444444443
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.76 E-value=7.4e-19 Score=164.85 Aligned_cols=175 Identities=19% Similarity=0.201 Sum_probs=129.1
Q ss_pred cEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChh-hhhhcCCCCCcEeecccCcCcCCCCccccCC
Q 006570 69 KIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRF-FTILTKLSNLKVLSLVSLGLWGPLPSKINRF 147 (640)
Q Consensus 69 gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 147 (640)
++.|... .++.++++++..+... ...+++|+|++|.++..+ +..|.++++|+.|+|++|.+.+..+..|..+
T Consensus 5 ~C~C~~~---~v~Cs~~~L~~iP~~l----p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~ 77 (192)
T d1w8aa_ 5 MCHCEGT---TVDCTGRGLKEIPRDI----PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA 77 (192)
T ss_dssp TSEEETT---EEECTTSCCSSCCSCC----CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC
T ss_pred CCEEcCC---EEEEeCCCcCccCCCC----CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccc
Confidence 4566432 4566677764332222 257888999999987644 5678899999999999999988888899999
Q ss_pred CCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc--ccccceeecc
Q 006570 148 WSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILR 224 (640)
Q Consensus 148 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~ 224 (640)
++|++|+|++|+|+...|..|.++++|++|+|++|+|++++++ |..+++|++|+|++|.+....... ...++.+.+.
T Consensus 78 ~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~ 157 (192)
T d1w8aa_ 78 SHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLN 157 (192)
T ss_dssp TTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCS
T ss_pred cccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhccc
Confidence 9999999999999977777889999999999999999998887 888999999999999886543322 2345555666
Q ss_pred cCcccccCCccccCCCCccEEEccCCccc
Q 006570 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
.|.++...|..+ ..++.++|+.|.|.
T Consensus 158 ~~~~~c~~p~~l---~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 158 GGAARCGAPSKV---RDVQIKDLPHSEFK 183 (192)
T ss_dssp GGGCBBCSSTTT---TTSBGGGSCTTTCC
T ss_pred CCCeEeCCChhh---cCCEeeecCHhhCc
Confidence 666665555433 34455566666654
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=3e-18 Score=161.62 Aligned_cols=176 Identities=23% Similarity=0.286 Sum_probs=100.9
Q ss_pred cccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccC
Q 006570 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL 184 (640)
Q Consensus 105 l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 184 (640)
+.++.+.+.+.++ ...+.+|++|++++|+++. ++ .+..+++|++|+|++|++++. ++ +.++++|++|++++|.+
T Consensus 23 ~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~ 96 (199)
T d2omxa2 23 TVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQI 96 (199)
T ss_dssp HHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCC
T ss_pred HHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCc-cc-ccCCccccccccccccc
Confidence 3445555444332 2345667777777777743 33 366677777777777777643 32 66777777777777776
Q ss_pred CccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCC
Q 006570 185 NGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLP 264 (640)
Q Consensus 185 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 264 (640)
.... .+.+++.|+.|++++|.+... ..+..+++|+.|++++|++.. ++ .+..++
T Consensus 97 ~~~~-~l~~l~~L~~L~l~~~~~~~~-----------------------~~~~~l~~L~~L~l~~n~l~~-~~-~l~~~~ 150 (199)
T d2omxa2 97 ADIT-PLANLTNLTGLTLFNNQITDI-----------------------DPLKNLTNLNRLELSSNTISD-IS-ALSGLT 150 (199)
T ss_dssp CCCG-GGTTCTTCSEEECCSSCCCCC-----------------------GGGTTCTTCSEEECCSSCCCC-CG-GGTTCT
T ss_pred cccc-ccccccccccccccccccccc-----------------------cccchhhhhHHhhhhhhhhcc-cc-cccccc
Confidence 5543 366666777777766665432 224455566666666666552 22 355556
Q ss_pred CCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCce
Q 006570 265 SILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRT 316 (640)
Q Consensus 265 ~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~ 316 (640)
+|++|++++|++++. + .+.++++|+.|++++|+++. +| .+..+++|+.
T Consensus 151 ~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~ 198 (199)
T d2omxa2 151 SLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD-IS-VLAKLTNLES 198 (199)
T ss_dssp TCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSE
T ss_pred cccccccccccccCC-c-cccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCc
Confidence 666666666666542 2 25556666666666666553 22 3445555543
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.76 E-value=6.2e-19 Score=165.35 Aligned_cols=171 Identities=19% Similarity=0.160 Sum_probs=103.8
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccC-CccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEI-PMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
+.++.++++++ .+|..+. +++++|+|++|+|++.+ +..|.++++|+.|+|++|.+++.++. |..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 45666666664 4555443 46666666666665433 33456666666666666666666555 55566666665555
Q ss_pred CCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc
Q 006570 205 NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (640)
Q Consensus 205 N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 284 (640)
|+| +...|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+....+..+
T Consensus 88 N~l---------------------~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~ 146 (192)
T d1w8aa_ 88 NKI---------------------KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146 (192)
T ss_dssp CCC---------------------CEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH
T ss_pred ccc---------------------cccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH
Confidence 554 44556667777777777777777777777777777777777777777754322111
Q ss_pred cCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 285 SCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 285 ~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
-...++.+.+..|.++...|..+ ..++.++++.|.+.
T Consensus 147 -~~~~l~~~~l~~~~~~c~~p~~l---~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 147 -FAEWLRKKSLNGGAARCGAPSKV---RDVQIKDLPHSEFK 183 (192)
T ss_dssp -HHHHHHHHCCSGGGCBBCSSTTT---TTSBGGGSCTTTCC
T ss_pred -HhhhhhhhcccCCCeEeCCChhh---cCCEeeecCHhhCc
Confidence 11234555666666666556543 33445566666554
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=2.1e-18 Score=164.07 Aligned_cols=184 Identities=21% Similarity=0.185 Sum_probs=152.7
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccC
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGG 204 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~ 204 (640)
++...++..+.+++.++. ..+.+|++|++++|.+.. ++ .+..+++|++|+|++|+|++.. .+..+++|++|++++
T Consensus 25 ~~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~ 99 (210)
T d1h6ta2 25 ETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDE 99 (210)
T ss_dssp HHHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCS
T ss_pred HHHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCcc-ccccCcccccccccc
Confidence 334456777777766653 457799999999999984 44 4888999999999999999865 578999999999999
Q ss_pred CCCCCCCC-CcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcc
Q 006570 205 NDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283 (640)
Q Consensus 205 N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 283 (640)
|++++... ..+++|+.|++++|.+.. + ..+..+++|+.+++++|.+++. ..+..+++|+.+++++|++++. + .
T Consensus 100 n~i~~l~~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~i-~-~ 173 (210)
T d1h6ta2 100 NKVKDLSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI-V-P 173 (210)
T ss_dssp SCCCCGGGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-G-G
T ss_pred ccccccccccccccccccccccccccc-c-cccccccccccccccccccccc--cccccccccccccccccccccc-c-c
Confidence 99986432 227899999999999973 3 4688999999999999999853 4578899999999999999874 4 3
Q ss_pred ccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecc
Q 006570 284 ISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321 (640)
Q Consensus 284 ~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~ 321 (640)
+.++++|+.|++++|+++. +| .+..+++|+.|++++
T Consensus 174 l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 174 LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred ccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 8899999999999999984 55 589999999999874
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=3.2e-18 Score=161.42 Aligned_cols=171 Identities=19% Similarity=0.220 Sum_probs=138.1
Q ss_pred CCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEc
Q 006570 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202 (640)
Q Consensus 123 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L 202 (640)
+.++..+.++.+.+++.++ ...+.+|++|++++|.+. .++ .+..+++|++|+|++|+|++..| +.++++|++|++
T Consensus 17 l~~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l 91 (199)
T d2omxa2 17 LAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILM 91 (199)
T ss_dssp HHHHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred HHHHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccCccc-ccCCcccccccc
Confidence 3344456677788776554 356788999999999998 454 47888999999999999988655 888888888888
Q ss_pred cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCc
Q 006570 203 GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282 (640)
Q Consensus 203 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 282 (640)
++|.+. .+| .+.++++|+.|++++|.+... ..+..+++|+.|++++|++.. +|
T Consensus 92 ~~n~~~----------------------~~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~~- 144 (199)
T d2omxa2 92 NNNQIA----------------------DIT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-IS- 144 (199)
T ss_dssp CSSCCC----------------------CCG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-CG-
T ss_pred cccccc----------------------ccc-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhcc-cc-
Confidence 887763 222 377899999999999999854 347899999999999999975 44
Q ss_pred cccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 283 ~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.+..+++|+.|++++|++++. + .+..+++|+.|++++|+++..
T Consensus 145 ~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 145 ALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSDI 187 (199)
T ss_dssp GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCC
T ss_pred cccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCCC
Confidence 588999999999999999864 3 488999999999999999874
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.68 E-value=1.4e-15 Score=155.68 Aligned_cols=229 Identities=24% Similarity=0.222 Sum_probs=153.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|||++++++. ++. ..++|++|+|++|.+. .+|.. +.+|+.|++++|+++ .++. + .+.|++|+
T Consensus 38 ~~l~~LdLs~~~L~~-lp~----~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~ 104 (353)
T d1jl5a_ 38 RQAHELELNNLGLSS-LPE----LPPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD-L--PPLLEYLG 104 (353)
T ss_dssp HTCSEEECTTSCCSC-CCS----CCTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS-C--CTTCCEEE
T ss_pred cCCCEEEeCCCCCCC-CCC----CCCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhh-h--cccccccc
Confidence 467789999998853 332 1358899999999886 45654 467889999999885 3443 2 14699999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCC-------------------CccCcCcCCeeEccCCCCCCCC----
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-------------------DLQRLVLLEELNLGGNDFGPKF---- 211 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-------------------~~~~l~~L~~L~L~~N~l~~~~---- 211 (640)
|++|.+. .+|. ++.+++|+.|++++|.++..+. .+..++.++.|++++|.+....
T Consensus 105 L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~ 182 (353)
T d1jl5a_ 105 VSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPL 182 (353)
T ss_dssp CCSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCT
T ss_pred ccccccc-cccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceecccccccccccccccc
Confidence 9999998 6774 6789999999999998875443 2556777888999888764321
Q ss_pred ---------------CC--cccccceeecccCcccccCCccccC-----------------CCCccEEEccCCcccCc--
Q 006570 212 ---------------PS--LSKNIVSVILRNNSLRSEIPSGLKN-----------------FDQLKQFDISSNNFVGP-- 255 (640)
Q Consensus 212 ---------------~~--~~~~L~~L~l~~N~l~~~~p~~~~~-----------------l~~L~~L~Ls~N~l~~~-- 255 (640)
+. .++.|+.+++++|.... +|..... ...+...++..|.+.+.
T Consensus 183 ~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 261 (353)
T d1jl5a_ 183 SLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSE 261 (353)
T ss_dssp TCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSEESC
T ss_pred cccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccc
Confidence 11 14667778887777653 3322211 12233333333332211
Q ss_pred --------------CCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecc
Q 006570 256 --------------IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321 (640)
Q Consensus 256 --------------~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~ 321 (640)
++.....+++|++|+|++|+|+. +|.. +++|+.|++++|+|+ .+|.. +.+|+.|++++
T Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~ 333 (353)
T d1jl5a_ 262 LPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEY 333 (353)
T ss_dssp CCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCS
T ss_pred ccchhcccccccCccccccccCCCCCEEECCCCccCc-cccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcC
Confidence 01111234689999999999874 6653 568889999999988 56653 45688899999
Q ss_pred ccccCc
Q 006570 322 NCLSGV 327 (640)
Q Consensus 322 N~l~~~ 327 (640)
|+++..
T Consensus 334 N~L~~l 339 (353)
T d1jl5a_ 334 NPLREF 339 (353)
T ss_dssp SCCSSC
T ss_pred CcCCCC
Confidence 988754
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.60 E-value=3.1e-14 Score=145.32 Aligned_cols=220 Identities=20% Similarity=0.205 Sum_probs=150.7
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCC-CCCcEeecccCcCcCCCCccccCCCCCCEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKL-SNLKVLSLVSLGLWGPLPSKINRFWSLEVL 153 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 153 (640)
.+++.|+|++|+++ .++.. ..+|+.|++++|.+.. +..+ +.|++|++++|.+. .+|. ++.+++|++|
T Consensus 58 ~~L~~L~Ls~N~l~-~lp~~----~~~L~~L~l~~n~l~~-----l~~lp~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L 125 (353)
T d1jl5a_ 58 PHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLKA-----LSDLPPLLEYLGVSNNQLE-KLPE-LQNSSFLKII 125 (353)
T ss_dssp TTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSC-----CCSCCTTCCEEECCSSCCS-SCCC-CTTCTTCCEE
T ss_pred CCCCEEECCCCCCc-ccccc----hhhhhhhhhhhcccch-----hhhhccccccccccccccc-cccc-hhhhccceee
Confidence 46788999999885 33321 2478899999987753 2233 45999999999985 5674 6889999999
Q ss_pred EcccCcccccCC------------------ccccCCCCCCEEEccCccCCccC-------------------CCccCcCc
Q 006570 154 NISSNFIYGEIP------------------MEITSLKNLKSIVLADNLLNGSV-------------------PDLQRLVL 196 (640)
Q Consensus 154 ~Ls~N~l~~~~p------------------~~~~~l~~L~~L~L~~N~l~~~~-------------------~~~~~l~~ 196 (640)
++++|.+....+ ..+..++.++.|++++|.+...+ +.+..++.
T Consensus 126 ~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 205 (353)
T d1jl5a_ 126 DVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPF 205 (353)
T ss_dssp ECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTT
T ss_pred ccccccccccccccccccchhhccccccccccccccccceeccccccccccccccccccccccccccccccccccccccc
Confidence 999988773322 23566788889999888776532 23567788
Q ss_pred CCeeEccCCCCCCCCCCccc--------------------ccceeecccCccccc----------------CCccccCCC
Q 006570 197 LEELNLGGNDFGPKFPSLSK--------------------NIVSVILRNNSLRSE----------------IPSGLKNFD 240 (640)
Q Consensus 197 L~~L~L~~N~l~~~~~~~~~--------------------~L~~L~l~~N~l~~~----------------~p~~~~~l~ 240 (640)
|+.+++++|..... +.... .+...++..|.+.+. ++.....++
T Consensus 206 L~~l~l~~n~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 284 (353)
T d1jl5a_ 206 LTTIYADNNLLKTL-PDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPP 284 (353)
T ss_dssp CCEEECCSSCCSSC-CSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCT
T ss_pred cccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccchhcccccccCccccccccCC
Confidence 99999999886532 22222 233333333333211 111112357
Q ss_pred CccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeee
Q 006570 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVS 319 (640)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l 319 (640)
+|++|+|++|+|+ .+|.. +++|+.|+|++|+|+. +|.. +.+|+.|++++|+|+ .+|.... .++.|.+
T Consensus 285 ~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~~-l~~~---~~~L~~L~L~~N~L~-~lp~~~~---~L~~L~~ 351 (353)
T d1jl5a_ 285 SLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLAE-VPEL---PQNLKQLHVEYNPLR-EFPDIPE---SVEDLRM 351 (353)
T ss_dssp TCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCCCT---TCCEEEC
T ss_pred CCCEEECCCCccC-ccccc---cCCCCEEECCCCcCCc-cccc---cCCCCEEECcCCcCC-CCCcccc---ccCeeEC
Confidence 8999999999998 56653 6789999999999975 6753 468999999999998 6776433 3444443
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=3.1e-15 Score=128.80 Aligned_cols=103 Identities=22% Similarity=0.301 Sum_probs=64.3
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGND 206 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~ 206 (640)
|+|+|++|+++ .+| .+..+++|++|+|++|+|+ .+|+.++.+++|+.|++++|+|++. |++..+++|++|++++|+
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-CccccccccCeEECCCCc
Confidence 46777777774 344 3677777777777777776 5666677777777777777777654 346666666666666665
Q ss_pred CCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 207 l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
++... ....+..+++|+.|++++|.++
T Consensus 77 i~~~~--------------------~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSA--------------------AIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCSSS--------------------TTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCC--------------------CchhhcCCCCCCEEECCCCcCC
Confidence 53211 1123455566666666666665
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.6e-15 Score=137.29 Aligned_cols=128 Identities=18% Similarity=0.180 Sum_probs=67.5
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCC
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLE 198 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~ 198 (640)
+.++..|+.|+|++|+|+ .+|..+..+++|++|||++|.|+ .++ .|..+++|++|++++|+++..++. +..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 445556666666666663 34544455666666666666665 333 355566666666666666655554 34455555
Q ss_pred eeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcC---CccccCCCCCcEEE
Q 006570 199 ELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI---QSFLFSLPSILYLN 270 (640)
Q Consensus 199 ~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---p~~~~~l~~L~~L~ 270 (640)
+|+|++|+++.. . . -..+..+++|+.|++++|.++... +..+..+++|++||
T Consensus 91 ~L~L~~N~i~~~------------------~-~-l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVEL------------------G-D-LDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCG------------------G-G-GGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cceecccccccc------------------c-c-ccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 555555554311 0 0 023445556666666666655321 11344555555554
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.56 E-value=4.9e-15 Score=127.52 Aligned_cols=103 Identities=25% Similarity=0.371 Sum_probs=68.4
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccc
Q 006570 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS 230 (640)
Q Consensus 151 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~ 230 (640)
++|||++|+|+ .+| .+.++++|++|++++|+|+..++.+..+++|++|++++|+|+
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~---------------------- 56 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALE---------------------- 56 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC----------------------
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccCcchhhhhhhhccccccccccccc----------------------
Confidence 46777777776 444 366777777777777777765555666666666666666653
Q ss_pred cCCccccCCCCccEEEccCCcccCcC-CccccCCCCCcEEEccCCcCCc
Q 006570 231 EIPSGLKNFDQLKQFDISSNNFVGPI-QSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 231 ~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
.+| .+.++++|+.|++++|+|+... ...+..+++|+.|++++|+++.
T Consensus 57 ~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 57 NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccC-ccccccccCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 122 3667777777777777776433 2456777777777777777754
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=6.1e-15 Score=133.37 Aligned_cols=128 Identities=17% Similarity=0.120 Sum_probs=85.5
Q ss_pred cccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceee
Q 006570 143 KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI 222 (640)
Q Consensus 143 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ 222 (640)
.+.+..+|++|||++|+|+ .+|..+..+++|+.|+|++|+|+.. +.|..+++|++|++++|+++
T Consensus 13 ~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l-~~~~~l~~L~~L~ls~N~i~-------------- 76 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-------------- 76 (162)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC--------------
T ss_pred hccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc-CCcccCcchhhhhccccccc--------------
Confidence 3566777888888888887 5566666777788888887777754 45666666666666666553
Q ss_pred cccCcccccCCccccCCCCccEEEccCCcccCcCC-ccccCCCCCcEEEccCCcCCccCCc----cccCCCCCCEEe
Q 006570 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSEALPV----NISCSAKLNFVE 294 (640)
Q Consensus 223 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~----~~~~~~~L~~L~ 294 (640)
...+..+..+++|+.|+|++|+|+.... ..+..+++|++|++++|.++. .|. .+..+++|++||
T Consensus 77 -------~l~~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~-~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 77 -------RIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp -------EECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEET
T ss_pred -------CCCccccccccccccceeccccccccccccccccccccchhhcCCCcccc-ccchHHHHHHHCCCcCeeC
Confidence 2233334567778888888888764321 356777888888888887754 332 355667777765
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=1e-14 Score=144.96 Aligned_cols=203 Identities=15% Similarity=0.150 Sum_probs=123.2
Q ss_pred CCCCCcEeecccCcCcCC-CCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc-cCCcc-CCC-ccCcCcC
Q 006570 122 KLSNLKVLSLVSLGLWGP-LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN-LLNGS-VPD-LQRLVLL 197 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~-~~~l~~L 197 (640)
...+|++|||++|.++.. ++..+..+++|++|+|++|.+++..+..++.+++|++|+|+++ .++.. ... +..+++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 445677777777666433 3344566777777777777776666666777777777777763 45421 112 3456777
Q ss_pred CeeEccCC-CCCCCC-C----CcccccceeecccC--cccc-cCCccccCCCCccEEEccCC-cccCcCCccccCCCCCc
Q 006570 198 EELNLGGN-DFGPKF-P----SLSKNIVSVILRNN--SLRS-EIPSGLKNFDQLKQFDISSN-NFVGPIQSFLFSLPSIL 267 (640)
Q Consensus 198 ~~L~L~~N-~l~~~~-~----~~~~~L~~L~l~~N--~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~ 267 (640)
++|+++++ .++... . ...++|+.|+++++ .++. .+...+.++++|++|+|++| .+++.....+.++++|+
T Consensus 124 ~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~ 203 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203 (284)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred cccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCC
Confidence 77777764 333211 1 11356777777654 2332 12223356788888888875 46766677788888888
Q ss_pred EEEccC-CcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 268 YLNLAG-NQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 268 ~L~l~~-N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+|+|++ +.+++.....++++++|+.|+++++--.+.++.....++ .+.+..+.++..
T Consensus 204 ~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp---~L~i~~~~ls~~ 261 (284)
T d2astb2 204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALP---HLQINCSHFTTI 261 (284)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHST---TSEESCCCSCCT
T ss_pred EEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCc---cccccCccCCCC
Confidence 888888 467766666777888888888887621111111112233 344566666654
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.46 E-value=3.2e-15 Score=153.14 Aligned_cols=227 Identities=18% Similarity=0.115 Sum_probs=159.5
Q ss_pred ccccccccCccCCCCh----hhhhhcCCCCCcEeecccCcCcCC----------CCccccCCCCCCEEEcccCccccc--
Q 006570 100 FSASQQSLSANFNIDR----FFTILTKLSNLKVLSLVSLGLWGP----------LPSKINRFWSLEVLNISSNFIYGE-- 163 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~----------~p~~~~~l~~L~~L~Ls~N~l~~~-- 163 (640)
..++.|+|++|.+... +...+...++|+.|+++++..... +...+..+++|++|+|++|.+...
T Consensus 31 ~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 110 (344)
T d2ca6a1 31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 110 (344)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccc
Confidence 4677788888776543 334567788999999987755221 123356778899999999988754
Q ss_pred --CCccccCCCCCCEEEccCccCCccCC--------------CccCcCcCCeeEccCCCCCCCCCC-------cccccce
Q 006570 164 --IPMEITSLKNLKSIVLADNLLNGSVP--------------DLQRLVLLEELNLGGNDFGPKFPS-------LSKNIVS 220 (640)
Q Consensus 164 --~p~~~~~l~~L~~L~L~~N~l~~~~~--------------~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~L~~ 220 (640)
+...+..+++|+.|++++|.+...-. .....+.|+.|++++|+++..... ..+.|+.
T Consensus 111 ~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~ 190 (344)
T d2ca6a1 111 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 190 (344)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred cchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcc
Confidence 34445667899999999998753111 023466889999999988643221 1468999
Q ss_pred eecccCccccc-----CCccccCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCccCCc----ccc--
Q 006570 221 VILRNNSLRSE-----IPSGLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEALPV----NIS-- 285 (640)
Q Consensus 221 L~l~~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~----~~~-- 285 (640)
|+|++|+++.. +...+..+++|+.|+|++|.++.. +...+..+++|++|+|++|.|++.-.. .+.
T Consensus 191 L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~ 270 (344)
T d2ca6a1 191 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 270 (344)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred cccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhc
Confidence 99999998632 344577788999999999998632 345567889999999999998754222 222
Q ss_pred CCCCCCEEeccCccCccc----CCCCcc-CCCCCceeeeccccccC
Q 006570 286 CSAKLNFVEISHNLLIGK----LPSCIG-SNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~----~p~~~~-~~~~l~~l~l~~N~l~~ 326 (640)
....|+.||+++|+|+.. +...+. ..+.|+.+++++|++..
T Consensus 271 ~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 271 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred cCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 236799999999998743 223332 46789999999998864
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.1e-15 Score=162.15 Aligned_cols=110 Identities=17% Similarity=0.128 Sum_probs=71.0
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCC----hhhhhhcCCCCCcEeecccCcCcCC----CCcccc-C
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNID----RFFTILTKLSNLKVLSLVSLGLWGP----LPSKIN-R 146 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~----~~~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~-~ 146 (640)
+++.||+++++++...-.........++.|+|++|.++. .++..+..+++|+.|||++|.|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 477888888877431000000112567788888887763 3445677888888888888887421 222222 2
Q ss_pred CCCCCEEEcccCccccc----CCccccCCCCCCEEEccCccCC
Q 006570 147 FWSLEVLNISSNFIYGE----IPMEITSLKNLKSIVLADNLLN 185 (640)
Q Consensus 147 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 185 (640)
..+|++|+|++|.++.. ++..+..+++|++|+|++|.++
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 34788888888888743 4556777888888888888764
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=7.2e-15 Score=146.09 Aligned_cols=175 Identities=15% Similarity=0.174 Sum_probs=76.0
Q ss_pred CCCCCEEEcccCccccc-CCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCC-CCCCCC----CCcccccc
Q 006570 147 FWSLEVLNISSNFIYGE-IPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN-DFGPKF----PSLSKNIV 219 (640)
Q Consensus 147 l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N-~l~~~~----~~~~~~L~ 219 (640)
..+|++|||+++.++.. ++..+..+++|++|+|++|.+++..+. +..+++|++|+|+++ .++... ...+++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 34555555555554432 223344555555555555555433322 444555555555553 232110 01134555
Q ss_pred eeecccC-ccccc-CCccccC-CCCccEEEccCC--cccCc-CCccccCCCCCcEEEccCC-cCCccCCccccCCCCCCE
Q 006570 220 SVILRNN-SLRSE-IPSGLKN-FDQLKQFDISSN--NFVGP-IQSFLFSLPSILYLNLAGN-QLSEALPVNISCSAKLNF 292 (640)
Q Consensus 220 ~L~l~~N-~l~~~-~p~~~~~-l~~L~~L~Ls~N--~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~~~~L~~ 292 (640)
+|+++++ .++.. ++..+.. .++|+.|+++++ .++.. +...+.++++|++|++++| .+++.....+..+++|++
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~ 204 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 204 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred ccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCE
Confidence 5555543 22211 1111211 234555555543 22211 1122234455555555553 344444444555555555
Q ss_pred EeccC-ccCcccCCCCccCCCCCceeeecc
Q 006570 293 VEISH-NLLIGKLPSCIGSNSLNRTVVSTW 321 (640)
Q Consensus 293 L~ls~-N~l~~~~p~~~~~~~~l~~l~l~~ 321 (640)
|++++ +.++......++.+++|+.+++++
T Consensus 205 L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~ 234 (284)
T d2astb2 205 LSLSRCYDIIPETLLELGEIPTLKTLQVFG 234 (284)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred EECCCCCCCChHHHHHHhcCCCCCEEeeeC
Confidence 55555 244444344444555555555544
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.43 E-value=1.4e-15 Score=142.57 Aligned_cols=114 Identities=25% Similarity=0.290 Sum_probs=62.9
Q ss_pred CCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccc
Q 006570 140 LPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIV 219 (640)
Q Consensus 140 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~ 219 (640)
+|..+..+++|++|+|++|+|+ .++ .+.++++|++|+|++|+|+..++.+..+++|++|++++|+++.
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~---------- 107 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS---------- 107 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCC----------
T ss_pred hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccccccccccccccccccccccccccc----------
Confidence 4455666777777777777766 444 3666666777777766666443223334455555555555532
Q ss_pred eeecccCcccccCCccccCCCCccEEEccCCcccCcCC-ccccCCCCCcEEEccCCcCCc
Q 006570 220 SVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 220 ~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~ 278 (640)
+ +.+.++++|+.|+|++|+|+.... ..+..+++|+.|+|++|++..
T Consensus 108 ------------l-~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 108 ------------L-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp ------------H-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred ------------c-ccccccccccccccccchhccccccccccCCCccceeecCCCcccc
Confidence 1 124445555666666665553211 235555566666666665544
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.42 E-value=1.7e-15 Score=141.98 Aligned_cols=146 Identities=18% Similarity=0.245 Sum_probs=108.1
Q ss_pred cccccccCccC-CCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 101 SASQQSLSANF-NIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 101 ~l~~l~l~~n~-~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..+.+++.++. -...++..+..|++|+.|+|++|+|+ .++ .+..+++|++|+|++|.|+ .+|..+..+++|+.|++
T Consensus 24 ~~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l 100 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWI 100 (198)
T ss_dssp TCSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEEC
T ss_pred ccceeeeecccCchhhhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccc
Confidence 34455555542 12445678999999999999999996 455 5999999999999999998 67776666789999999
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcc
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF 259 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 259 (640)
++|+|+.. +.+..+++|++|+|++|+++.... ...+..+++|+.|+|++|.+....+..
T Consensus 101 ~~N~i~~l-~~~~~l~~L~~L~L~~N~i~~~~~--------------------~~~l~~l~~L~~L~L~~N~l~~~~~~~ 159 (198)
T d1m9la_ 101 SYNQIASL-SGIEKLVNLRVLYMSNNKITNWGE--------------------IDKLAALDKLEDLLLAGNPLYNDYKEN 159 (198)
T ss_dssp SEEECCCH-HHHHHHHHSSEEEESEEECCCHHH--------------------HHHHTTTTTCSEEEECSSHHHHHHCTT
T ss_pred cccccccc-ccccccccccccccccchhccccc--------------------cccccCCCccceeecCCCccccCcccc
Confidence 99999975 458888899999888887743100 024667788888888888776443322
Q ss_pred ----------ccCCCCCcEEE
Q 006570 260 ----------LFSLPSILYLN 270 (640)
Q Consensus 260 ----------~~~l~~L~~L~ 270 (640)
+..+|+|+.||
T Consensus 160 ~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 160 NATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp TTHHHHHHHHHHHCSSCCEES
T ss_pred cchhhHHHHHHHHCCCcCEeC
Confidence 34566666654
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.31 E-value=4.5e-14 Score=144.34 Aligned_cols=211 Identities=18% Similarity=0.206 Sum_probs=155.5
Q ss_pred hhhhhcCCCCCcEeecccCcCcCC----CCccccCCCCCCEEEcccCccccc----------CCccccCCCCCCEEEccC
Q 006570 116 FFTILTKLSNLKVLSLVSLGLWGP----LPSKINRFWSLEVLNISSNFIYGE----------IPMEITSLKNLKSIVLAD 181 (640)
Q Consensus 116 ~~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----------~p~~~~~l~~L~~L~L~~ 181 (640)
+...+.+.+.|+.|+|++|.+... +-..+...++|+.|+++++.+... +...+..+++|+.|+|++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 345677889999999999988432 334577889999999998865421 223356789999999999
Q ss_pred ccCCccCC-----CccCcCcCCeeEccCCCCCCCCC----------------CcccccceeecccCccccc----CCccc
Q 006570 182 NLLNGSVP-----DLQRLVLLEELNLGGNDFGPKFP----------------SLSKNIVSVILRNNSLRSE----IPSGL 236 (640)
Q Consensus 182 N~l~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~----------------~~~~~L~~L~l~~N~l~~~----~p~~~ 236 (640)
|.++..-. .+...++|++|++++|.++..-. ...+.|+.+.+++|+++.. +...+
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l 182 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 182 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred cccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchh
Confidence 99976421 25677899999999998752111 0135788999999988632 23345
Q ss_pred cCCCCccEEEccCCcccCc-----CCccccCCCCCcEEEccCCcCCcc----CCccccCCCCCCEEeccCccCcccCCCC
Q 006570 237 KNFDQLKQFDISSNNFVGP-----IQSFLFSLPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 237 ~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
...+.|+.|+|++|++... +...+..+++|+.|+|++|+++.. +...+..+++|+.|+|++|.|++.-...
T Consensus 183 ~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~ 262 (344)
T d2ca6a1 183 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262 (344)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred hhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHH
Confidence 5678999999999998642 334567889999999999998642 3455678899999999999987542222
Q ss_pred ----cc--CCCCCceeeeccccccC
Q 006570 308 ----IG--SNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 308 ----~~--~~~~l~~l~l~~N~l~~ 326 (640)
+. ....++.|++++|+++.
T Consensus 263 l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 263 VVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHhhhccCCCCCEEECCCCcCCh
Confidence 22 23678999999998764
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=3.4e-12 Score=114.19 Aligned_cols=81 Identities=19% Similarity=0.128 Sum_probs=44.5
Q ss_pred CcEeecccCcCcCCCCccccCCCCCCEEEcccC-cccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEcc
Q 006570 126 LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSN-FIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLG 203 (640)
Q Consensus 126 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~ 203 (640)
...++.+++++. ..|..+..+++|++|++++| .|+..-+..|.++++|+.|+|++|+|+.+.+. |..+++|++|+|+
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 344555555553 34555555666666666544 35533344456666666666666666655554 5555555555555
Q ss_pred CCCC
Q 006570 204 GNDF 207 (640)
Q Consensus 204 ~N~l 207 (640)
+|+|
T Consensus 89 ~N~l 92 (156)
T d2ifga3 89 FNAL 92 (156)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 5554
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=1.7e-11 Score=109.49 Aligned_cols=109 Identities=17% Similarity=0.123 Sum_probs=63.2
Q ss_pred CCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCc
Q 006570 172 KNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251 (640)
Q Consensus 172 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 251 (640)
...+.++.+++.+...+..+..+++|++|++++|+ .++...+.+|.++++|+.|+|++|+
T Consensus 8 ~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~--------------------~l~~i~~~~f~~l~~L~~L~Ls~N~ 67 (156)
T d2ifga3 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQ--------------------HLQHLELRDLRGLGELRNLTIVKSG 67 (156)
T ss_dssp SSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCS--------------------SCCEECGGGSCSCCCCSEEECCSSC
T ss_pred CCCCeEEecCCCCccCcccccCccccCeeecCCCc--------------------cccccCchhhccccccCcceeeccc
Confidence 33444555555555444444444444444443331 2444444566677777777777777
Q ss_pred ccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCc
Q 006570 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
|+...|..|..+++|++|+|++|+|+...+..|. ..+|+.|+|++|.+.
T Consensus 68 l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~-~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 68 LRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ-GLSLQELVLSGNPLH 116 (156)
T ss_dssp CCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTC-SCCCCEEECCSSCCC
T ss_pred cCCcccccccccccccceeccCCCCcccChhhhc-cccccccccCCCccc
Confidence 7766666677777777777777777653333333 335777777777663
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=4.6e-13 Score=141.45 Aligned_cols=156 Identities=21% Similarity=0.188 Sum_probs=99.8
Q ss_pred CCCCCEEEccCccCCcc-----CCC-ccCcCcCCeeEccCCCCCCCCCC-------cccccceeecccCcccccCCccc-
Q 006570 171 LKNLKSIVLADNLLNGS-----VPD-LQRLVLLEELNLGGNDFGPKFPS-------LSKNIVSVILRNNSLRSEIPSGL- 236 (640)
Q Consensus 171 l~~L~~L~L~~N~l~~~-----~~~-~~~l~~L~~L~L~~N~l~~~~~~-------~~~~L~~L~l~~N~l~~~~p~~~- 236 (640)
.+.++.+++++|.+... .+. ......|+.|++++|.+...... ..+.++.+++++|.++......+
T Consensus 225 ~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~ 304 (460)
T d1z7xw1 225 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 304 (460)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred cccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence 34555555555554321 111 34456788888888887643221 14678888888888864322221
Q ss_pred ----cCCCCccEEEccCCcccCcCCc----cccCCCCCcEEEccCCcCCcc----CCcccc-CCCCCCEEeccCccCccc
Q 006570 237 ----KNFDQLKQFDISSNNFVGPIQS----FLFSLPSILYLNLAGNQLSEA----LPVNIS-CSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 237 ----~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~----~p~~~~-~~~~L~~L~ls~N~l~~~ 303 (640)
.....|+.+++++|.++..... .+...++|++|+|++|+|+.. ++..+. ..+.|+.|+|++|+|+..
T Consensus 305 ~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~ 384 (460)
T d1z7xw1 305 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS 384 (460)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred ccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChH
Confidence 2345788899998888754322 334556888999999988642 333332 456788999999988743
Q ss_pred ----CCCCccCCCCCceeeeccccccC
Q 006570 304 ----LPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 304 ----~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
++..+..+++|+.|++++|+++.
T Consensus 385 ~~~~l~~~l~~~~~L~~L~Ls~N~i~~ 411 (460)
T d1z7xw1 385 SCSSLAATLLANHSLRELDLSNNCLGD 411 (460)
T ss_dssp HHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHHHHHhcCCCCCEEECCCCcCCH
Confidence 44456667888899999888864
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=3.1e-09 Score=95.13 Aligned_cols=78 Identities=26% Similarity=0.230 Sum_probs=37.5
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCC--C-ccCcCcCCeeE
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--D-LQRLVLLEELN 201 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~-~~~l~~L~~L~ 201 (640)
..+.|+++++.. .| .+..+..+..|++.+|... .++..+..+++|++|+|++|+|+...+ . +..+++|+.|+
T Consensus 23 ~~~~Ldls~l~~---~~-~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLRS---DP-DLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCSS---CT-TTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCCC---Cc-hhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence 445566655432 12 2444444555555544443 334344455666666666666654322 1 33444444444
Q ss_pred ccCCCC
Q 006570 202 LGGNDF 207 (640)
Q Consensus 202 L~~N~l 207 (640)
|++|++
T Consensus 98 Ls~N~i 103 (162)
T d1koha1 98 LSGNEL 103 (162)
T ss_dssp CTTSCC
T ss_pred cccCcc
Confidence 444444
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=4.9e-09 Score=93.76 Aligned_cols=104 Identities=25% Similarity=0.130 Sum_probs=59.9
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCccccc--CCccccCCCCCCEEE
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGE--IPMEITSLKNLKSIV 178 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~ 178 (640)
+.+.|++++.... ..+..+..+..|++.++.. ..++..+..+++|++|+|++|+|+.. ++..+..+++|+.|+
T Consensus 23 ~~~~Ldls~l~~~----~~l~~~~~~~~l~~~~~~~-~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~ 97 (162)
T d1koha1 23 SQQALDLKGLRSD----PDLVAQNIDVVLNRRSSMA-ATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILN 97 (162)
T ss_dssp SSCCBCCCCCSSC----TTTTTTTCCCCTTSHHHHH-HHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCC
T ss_pred hhCeeecccCCCC----chhhhccchhhcchhhhHh-hhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccc
Confidence 3445566554321 1244444555555554433 33444455677788888888887743 233456677888888
Q ss_pred ccCccCCccCCC-ccCcCcCCeeEccCCCCCC
Q 006570 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFGP 209 (640)
Q Consensus 179 L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~ 209 (640)
|++|.|+...+- +....+|+.|+|++|.+..
T Consensus 98 Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~ 129 (162)
T d1koha1 98 LSGNELKSERELDKIKGLKLEELWLDGNSLSD 129 (162)
T ss_dssp CTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSS
T ss_pred cccCccccchhhhhhhccccceeecCCCCcCc
Confidence 888887765442 2233456666666666644
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.34 E-value=9e-07 Score=85.13 Aligned_cols=151 Identities=10% Similarity=0.047 Sum_probs=96.2
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccC
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQD 522 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~ 522 (640)
.|+....+.|+..+..+-++.+.||+... +++.+.+|+...........+.+|...+..+. +--+.+++.+..
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~----- 80 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER----- 80 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----
T ss_pred HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEe-----
Confidence 35566566666554443344568999875 45677888887655445566788888877663 333556665543
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccC-------------------------
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG------------------------- 577 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------- 577 (640)
.++..++|||++++.++.+.... ......++.++++.++.||+.
T Consensus 81 ---~~~~~~lv~~~l~G~~~~~~~~~--------~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (263)
T d1j7la_ 81 ---HDGWSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNND 149 (263)
T ss_dssp ---ETTEEEEEEECCSSEEHHHHTTT--------CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTT
T ss_pred ---cCCceEEEEEecccccccccccc--------cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHH
Confidence 23457999999999887654421 001122334444444444421
Q ss_pred -------------------------------CCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 578 -------------------------------VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 578 -------------------------------~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
....++|+|+.|.||++++++..-|.||+.+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T d1j7la_ 150 LADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp CSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred hhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcccC
Confidence 0123789999999999998777789999988643
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.74 E-value=9.7e-05 Score=69.89 Aligned_cols=74 Identities=15% Similarity=0.090 Sum_probs=49.0
Q ss_pred cccCCc-cceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC--cccceeeeEEEecccCCCCCCCeEEEEEE
Q 006570 459 IGEGSQ-GQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH--RHLVSILGHCILTYQDHPNTGSTVFLVLE 535 (640)
Q Consensus 459 ig~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~~~~~~~~~lv~E 535 (640)
+..|.. +.||+....++..+.+|...... ...+..|.+.++.+.. -.+.++++++. .+...++|||
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~--------~~~~~~~v~~ 86 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVT--------EAGRDWLLLG 86 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEE--------CSSCEEEEEE
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecc--------cccceEEEEE
Confidence 344443 57899998778888999765432 3456778887776633 23556666543 2345799999
Q ss_pred ccCCCCHh
Q 006570 536 HISNGSLR 543 (640)
Q Consensus 536 y~~~GsL~ 543 (640)
|+++-++.
T Consensus 87 ~i~G~~~~ 94 (255)
T d1nd4a_ 87 EVPGQDLL 94 (255)
T ss_dssp CCSSEETT
T ss_pred eeeccccc
Confidence 99876553
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.54 E-value=7.2e-06 Score=72.86 Aligned_cols=12 Identities=17% Similarity=0.271 Sum_probs=6.4
Q ss_pred CCCCCcEeeccc
Q 006570 122 KLSNLKVLSLVS 133 (640)
Q Consensus 122 ~l~~L~~L~L~~ 133 (640)
+.+.|+.|+|++
T Consensus 13 n~~~L~~L~L~~ 24 (167)
T d1pgva_ 13 DDTDLKEVNINN 24 (167)
T ss_dssp TCSSCCEEECTT
T ss_pred CCCCCcEEEeCC
Confidence 445555555554
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.50 E-value=2e-05 Score=69.90 Aligned_cols=107 Identities=13% Similarity=0.077 Sum_probs=73.0
Q ss_pred ccccccccCcc-CCCCh----hhhhhcCCCCCcEeecccCcCcCC----CCccccCCCCCCEEEcccCccccc----CCc
Q 006570 100 FSASQQSLSAN-FNIDR----FFTILTKLSNLKVLSLVSLGLWGP----LPSKINRFWSLEVLNISSNFIYGE----IPM 166 (640)
Q Consensus 100 ~~l~~l~l~~n-~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 166 (640)
+.|+.|+|+++ .+... +...+...+.|+.|+|++|.+... +...+...+.|++|+|++|.|+.. +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 46777777763 34332 345678889999999999988532 224456678899999999998843 233
Q ss_pred cccCCCCCCEEEccCccCCccCC--------CccCcCcCCeeEccCCC
Q 006570 167 EITSLKNLKSIVLADNLLNGSVP--------DLQRLVLLEELNLGGND 206 (640)
Q Consensus 167 ~~~~l~~L~~L~L~~N~l~~~~~--------~~~~l~~L~~L~L~~N~ 206 (640)
.+...+.|++|+|++|++...-. .+...+.|+.|+++.+.
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 46667889999998887654321 14456778888876654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.27 E-value=0.0006 Score=68.91 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=47.9
Q ss_pred CCccccCCccceEEEEeCC-CcEEEEEEeecc-------cCCChHHHHHHHHHHhcCC-C--cccceeeeEEEecccCCC
Q 006570 456 TNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLK-------QRHLPQSLMQHVELLSKLR-H--RHLVSILGHCILTYQDHP 524 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~-h--~niv~l~g~~~~~~~~~~ 524 (640)
.+.||.|....||+....+ ++.|+||.-... -....++...|.+.|+.+. + ..+.+++.+.
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d-------- 102 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------- 102 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--------
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--------
Confidence 3568999999999998654 678999975421 1123345667888887662 2 3455666543
Q ss_pred CCCCeEEEEEEccCCCC
Q 006570 525 NTGSTVFLVLEHISNGS 541 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~Gs 541 (640)
....++||||+++..
T Consensus 103 --~~~~~lvmE~L~~~~ 117 (392)
T d2pula1 103 --TEMAVTVMEDLSHLK 117 (392)
T ss_dssp --TTTTEEEECCCTTSE
T ss_pred --CCCCEEEEeccCCcc
Confidence 122479999997644
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.83 E-value=0.0017 Score=63.56 Aligned_cols=140 Identities=11% Similarity=0.103 Sum_probs=78.8
Q ss_pred cceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc--ceeeeEEEecccCCCCCCCeEEEEEEccCCCCH
Q 006570 465 GQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL--VSILGHCILTYQDHPNTGSTVFLVLEHISNGSL 542 (640)
Q Consensus 465 g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL 542 (640)
-.||+.+..+|+.|++|+.+.. ....+++..|.+.+..+....+ +..+. . ........+...+.+++|++|..+
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~--~-~g~~~~~~~~~~~~l~~~~~G~~~ 111 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVA--F-NGQTLLNHQGFYFAVFPSVGGRQF 111 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCC--B-TTBSCEEETTEEEEEEECCCCEEC
T ss_pred ceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCcee--c-CCCeeeeeeeEEEEEEeecCCcCC
Confidence 4799999999999999998754 2346778889988887743222 11111 1 111111234567889999976332
Q ss_pred h-----HH---------hhc----c--CCCCCCCHH----------------------HHHHHHHHHHHHhh-hcccCCC
Q 006570 543 R-----DY---------LTD----W--KKKDMLKWP----------------------QRMAIIIGATRGVQ-FLHTGVA 579 (640)
Q Consensus 543 ~-----~~---------l~~----~--~~~~~l~~~----------------------~~~~i~~~ia~~L~-yLH~~~~ 579 (640)
. .+ +|. . ......++. .....+..+...+. +..+...
T Consensus 112 ~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p 191 (325)
T d1zyla1 112 EADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFT 191 (325)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSC
T ss_pred CCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 1 11 010 0 001111111 11122222222222 2223334
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
.++||+|+.+.|||++++ ..+.||+-+..
T Consensus 192 ~~liHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 192 VLRLHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp CEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred ceeecCCCCcccEEEeCC--ceEEechhccc
Confidence 678999999999999754 45899998875
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.68 E-value=0.0043 Score=60.19 Aligned_cols=165 Identities=11% Similarity=0.051 Sum_probs=85.7
Q ss_pred CCHHHHHHHhcCCCCCCccc-----cCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc--ceee
Q 006570 441 FSLEEIEEATNNFDPTNLIG-----EGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL--VSIL 513 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig-----~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~ 513 (640)
.+.+|++....+|.+.+... .|---+.|+.+..+| .+++|+..... ..+++..|++++..+...++ ...+
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence 56788888889998765543 454567899987665 48899886432 23556667777776642221 1111
Q ss_pred eEEEecccCCCCCCCeEEEEEEccCCCCHhH--------------Hhhcc----CC---CCCCC----------------
Q 006570 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRD--------------YLTDW----KK---KDMLK---------------- 556 (640)
Q Consensus 514 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~--------------~l~~~----~~---~~~l~---------------- 556 (640)
... .+..........+.++.+..+..... .++.. .. .....
T Consensus 80 ~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (316)
T d2ppqa1 80 PRK--DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 157 (316)
T ss_dssp CBT--TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred eec--CCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhh
Confidence 100 00000011234566777776532211 00100 00 00000
Q ss_pred -HHHHHHHHHHHHHHhhhc-ccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 557 -WPQRMAIIIGATRGVQFL-HTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 557 -~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
.......+......+.-. ..+...++||+|+.+.||+++.+...-|.||+.+..
T Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 158 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence 001111111122222211 122346899999999999999988778999999863
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.60 E-value=0.00013 Score=64.34 Aligned_cols=42 Identities=10% Similarity=0.062 Sum_probs=19.0
Q ss_pred hcCCCCCcEeeccc-CcCcCC----CCccccCCCCCCEEEcccCccc
Q 006570 120 LTKLSNLKVLSLVS-LGLWGP----LPSKINRFWSLEVLNISSNFIY 161 (640)
Q Consensus 120 l~~l~~L~~L~L~~-n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 161 (640)
..+.+.|++|+|++ +.++.. +-..+...++|++|+|++|.++
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 59 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCccc
Confidence 34455666666654 233211 1122334445555555555544
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.46 E-value=0.00026 Score=62.27 Aligned_cols=108 Identities=19% Similarity=0.138 Sum_probs=73.8
Q ss_pred ccccccccCc-cCCCCh----hhhhhcCCCCCcEeecccCcCcCC----CCccccCCCCCCEEEcccCccccc----CCc
Q 006570 100 FSASQQSLSA-NFNIDR----FFTILTKLSNLKVLSLVSLGLWGP----LPSKINRFWSLEVLNISSNFIYGE----IPM 166 (640)
Q Consensus 100 ~~l~~l~l~~-n~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 166 (640)
+.|+.|+|++ +.+... +..++...++|+.|+|++|.++.. +-..+...+.|+.|++++|.+... +-.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4667777776 334332 445677899999999999998543 223456778999999999988743 334
Q ss_pred cccCCCCCCEEEc--cCccCCcc-----CCCccCcCcCCeeEccCCCC
Q 006570 167 EITSLKNLKSIVL--ADNLLNGS-----VPDLQRLVLLEELNLGGNDF 207 (640)
Q Consensus 167 ~~~~l~~L~~L~L--~~N~l~~~-----~~~~~~l~~L~~L~L~~N~l 207 (640)
.+...++|+.++| ++|.+... ...+...++|+.|+++.|..
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 5667788887655 46666431 12256778888888876653
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.12 E-value=0.025 Score=56.55 Aligned_cols=72 Identities=15% Similarity=0.121 Sum_probs=47.4
Q ss_pred CccccCCccceEEEEeCC--------CcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.|+-|-.-.+|+...++ .+.|.+++.. . .....+..+|.++++.+. +.-..++++++-
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~---------- 115 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFS---------- 115 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEET----------
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcC----------
Confidence 567778888999998653 3456676654 2 233456678888888874 433347777651
Q ss_pred CeEEEEEEccCCCCH
Q 006570 528 STVFLVLEHISNGSL 542 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL 542 (640)
-.+||||+++-++
T Consensus 116 --~g~I~efi~g~~l 128 (395)
T d1nw1a_ 116 --GGRLEEYIPSRPL 128 (395)
T ss_dssp --TEEEECCCCEEEC
T ss_pred --CceEEEEeccccC
Confidence 1689999987443
|