Citrus Sinensis ID: 006595

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------64
Protein Sequence
MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHcccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccHHHHcccccccccccccEEEEcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccHHHHHHcccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEEccHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHccccccccccccccccccccccccccccccHHcccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEcccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHHHHHHHccEHHHcccccEEEEcccHHHHHHHccHHccHHHHccccHHHHHHHHccHHHccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccccccHHHcccccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccHHEcccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHcccccHHHccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
meevgaqvapsILMHQRLssrlceaptmTMTMTMAKKRHLSYQAqsqnhyggeqqnwnpklwdwdsvgfvgkpvvdsdpevlrlggatasespnkttdninynynynnqkkgnttttsavtvgnveddgrldlnlgggltavdveqpeppvvtskpnkrvrsgspgtapypmcqvdnckedlsnakdyhrrhkvceLHSKSTKALVGKQMQRFCqqcsrfhplsefdegkRSCRRRLaghnrrrrktqpeditsrmlihghgnqsnnptanVDIVNLLTALARAQgktedrsiscssvpDREQLLMILSKinslplpadLAAKLhnfgslnrktpvhtstdvqnrlnentsspsTMDLLAVLSStltapspdtlaahsqrsshssdsektkstcpeqatpnflkrttmdfpsvggersstsyqspvedsdgqnqetrvnlplqlfssspeddsppklsssrkyfssdssnpieerspssspvvqtffpmqstsetvkseklsigrevnanvegnrsrgsimplelfrgsnkaadncsfqsfpyqagytsssgsdhspsslnsdaqdcTGRIIFKLfdkdpsqfpgtLRKEIYNWLsnspsemesyirpgcvilslyvsmpyatwEQVSEVLFCTFSISM
Flexible Loop (DISEMBL)
meevgaqvapsilmhqrlsSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLggatasespnkttdnINYNYNynnqkkgntTTTSAVTVGNVEDDGRLDLNLGGGLtavdveqpeppvvtskpnkrvrsgspgtapypmcQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRfhplsefdegkrscrrrlaghnrrrrktqpeditSRMLIhghgnqsnnptANVDIVNLLTALARAqgktedrsiscssvPDREQLLMILSKINSLPLPADLAAKLHNFGSlnrktpvhtstdvqnrlnentsspsTMDLLAVLSSTLTAPSPDTLAAHsqrsshssdsektkstcpeqatpnflkrttmdfpsvggersstsyqspvedsdgqnqETRVNLPLQlfssspeddsppklSSSRKYFSsdssnpieerspssspvvQTFFPMQstsetvkseklsigrevnanvegnrsrgsiMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLfdkdpsqfpgTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM
Low Complexity Region (SEG)
MEEVGAQVAPSILMHQRLSSRLCEAPtmtmtmtmAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPnkttdninynynynnqkkgnttttSAVTVGNVEddgrldlnlggglTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCrrrlaghnrrrrKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHsqrsshssdsektkstCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLsssrkyfssdssNPIEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTsssgsdhspsslnsDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM
Disordered region (IsUnstruct)
*****************************************************QQNWNPKLWDWDSVGFVGKPVVDS**********************INYNYNY*************VTVGNVE**GRLDLNLGGGLT************************************************HRRHKVCELH****KALVGKQMQRFCQQCSRFH*************************************************NVDIVNLLTALAR*******************QLLMILSKINSLPLPADLAAKLHNF***********************************************************************************************************************************************************************************************************************************************CTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSI**
Disordered Region (DISOPRED)
*****AQVAPSILMHQRLSSRL*************************************KLWDWDSVGFV***************************************************************NLGGG***********************************QVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRS********************************************LLTA***************************************************************************************************************************************************************************************************************************************************************************************************IFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM
Disordered Region (DISEMBL)
MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEP***************PGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLA***********EDITSRMLIHGHGNQSNNPTANVDIVNLLTALAR*************SVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPS*************************EQATPNFLKRTTMDFP***********************ETRVNLPLQLFS***********************************VVQTFFPMQ**********LSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAG****************DAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM
Disordered Region (DISPRO)
*****AQVAPSILMHQRLSSRLCEA***************************EQQNWNPKLWDWDSVGFVGKP********************************************SAVTVGNVEDDGRLDLNLGGGLT****************************PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRL*G*******************************NVDIVNLLTALARAQGK****SIS**SVPDREQLLMILSKINSLPLPA**************************************DLLA*L*STLTAPSPDTLAAHS************************************************************NLP**************************************SPVVQT******TSE*******************NRSRGSIMPLELFRG*************************************DCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	639	2.2.26 [Sep-21-2011]
Q8RY95	1035	Squamosa promoter-binding	yes	no	0.884	0.545	0.533	1e-170
Q700C2	988	Squamosa promoter-binding	no	no	0.760	0.491	0.558	1e-141
Q6Z8M8	1140	Squamosa promoter-binding	yes	no	0.940	0.527	0.422	1e-119
A2YX04	1140	Squamosa promoter-binding	N/A	no	0.940	0.527	0.422	1e-119
Q75LH6	969	Squamosa promoter-binding	no	no	0.319	0.210	0.422	6e-40
Q9S7P5	927	Squamosa promoter-binding	no	no	0.258	0.177	0.475	7e-39
Q9SMX9	881	Squamosa promoter-binding	no	no	0.239	0.173	0.467	2e-37
P0DI11	359	Squamosa promoter-binding	no	no	0.136	0.242	0.643	3e-30
B9DI20	359	Squamosa promoter-binding	no	no	0.136	0.242	0.643	3e-30
Q8GXL3	333	Squamosa promoter-binding	no	no	0.173	0.333	0.549	2e-29

>sp|Q8RY95|SPL14_ARATH Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3

 Score =  599 bits (1544), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 347/650 (53%), Positives = 431/650 (66%), Gaps = 85/650 (13%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSY-------QAQSQNHYGGE 53
           M+EVGAQVA  + +HQ                ++ +KR L Y       Q+Q Q      
Sbjct: 1   MDEVGAQVAAPMFIHQ----------------SLGRKRDLYYPMSNRLVQSQPQ-----R 39

Query: 54  QQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGN 113
           +  WN K+WDWDS  F  KPV   D EV                                
Sbjct: 40  RDEWNSKMWDWDSRRFEAKPV---DVEVQEFD---------------------------- 68

Query: 114 TTTTSAVTVGNVEDDGR-LDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPM 172
                 +T+ N   + R LDLNLG GLTAV+        V  +PNK+VRSGSPG   YPM
Sbjct: 69  ------LTLRNRSGEERGLDLNLGSGLTAVEETTTTTQNV--RPNKKVRSGSPG-GNYPM 119

Query: 173 CQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRS 232
           CQVDNC EDLS+AKDYHRRHKVCE+HSK+TKALVGKQMQRFCQQCSRFH LSEFDEGKRS
Sbjct: 120 CQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 179

Query: 233 CRRRLAGHNRRRRKT-QPEDITSRMLIHGHGNQSNN-PTANVDIVNLLTALARAQGKTED 290
           CRRRLAGHNRRRRKT QPE++ S +++ G+ + +NN   AN+D++ LLTALA AQGK   
Sbjct: 180 CRRRLAGHNRRRRKTTQPEEVASGVVVPGNHDTTNNTANANMDLMALLTALACAQGKNAV 239

Query: 291 RS-ISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNEN 349
           +  +   +VPDREQLL IL+KIN+LPLP DL +KL+N GSL RK   H + + QN +N  
Sbjct: 240 KPPVGSPAVPDREQLLQILNKINALPLPMDLVSKLNNIGSLARKNMDHPTVNPQNDMN-- 297

Query: 350 TSSPSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMD 409
            +SPSTMDLLAVLS+TL + SPD LA  SQ    + DSEKTK +  E      L++ T  
Sbjct: 298 GASPSTMDLLAVLSTTLGSSSPDALAILSQGGFGNKDSEKTKLSSYENGVTTNLEKRTFG 357

Query: 410 FPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSS 469
           F SVGGERSS+S QSP +DSD + Q+TR +L LQLF+SSPED+S P ++SSRKY+SS SS
Sbjct: 358 FSSVGGERSSSSNQSPSQDSDSRGQDTRSSLSLQLFTSSPEDESRPTVASSRKYYSSASS 417

Query: 470 NPIEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGS 529
           NP+E+RSPSSSPV+Q  FP+Q++ ET++S+          N + +  R   +PLELF  S
Sbjct: 418 NPVEDRSPSSSPVMQELFPLQASPETMRSK----------NHKNSSPRTGCLPLELFGAS 467

Query: 530 NKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRK 589
           N+ A + +F+ F  Q+GY +SSGSD+SP SLNSDAQD TG+I+FKL DKDPSQ PGTLR 
Sbjct: 468 NRGAADPNFKGFGQQSGY-ASSGSDYSPPSLNSDAQDRTGKIVFKLLDKDPSQLPGTLRS 526

Query: 590 EIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM 639
           EIYNWLSN PSEMESYIRPGCV+LS+YV+M  A WEQ+ + L     + +
Sbjct: 527 EIYNWLSNIPSEMESYIRPGCVVLSVYVAMSPAAWEQLEQKLLQRLGVLL 576

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May play a role in plant development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q700C2|SPL16_ARATH Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2

 Score =  502 bits (1293), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 286/512 (55%), Positives = 365/512 (71%), Gaps = 26/512 (5%)

Query: 131 LDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAP-----YPMCQVDNCKEDLSNA 185
           LDLNL  G    DVE    PV  ++P+K+VRSGSPG+       YP CQVDNCKEDLS A
Sbjct: 39  LDLNLPCGFN--DVEGT--PVDLTRPSKKVRSGSPGSGGGGGGNYPKCQVDNCKEDLSIA 94

Query: 186 KDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRR 245
           KDYHRRHKVCE+HSK+TKALVGKQMQRFCQQCSRFH LSEFDEGKRSCRRRL GHNRRRR
Sbjct: 95  KDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRRR 154

Query: 246 KTQPEDITSRML-IHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQL 304
           KTQP+ ITS+++ +    N SNN   N+D++ LLTAL  AQG+ E  +     VP REQL
Sbjct: 155 KTQPDAITSQVVALENRDNTSNN--TNMDVMALLTALVCAQGRNEATTNGSPGVPQREQL 212

Query: 305 LMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTS-TDVQNRLNENTSSPSTMDLLAVLS 363
           L IL+KI +LPLP +L +KL+N G L RK P   S  + QN +N   SSPSTMDLLA LS
Sbjct: 213 LQILNKIKALPLPMNLTSKLNNIGILARKNPEQPSPMNPQNSMN-GASSPSTMDLLAALS 271

Query: 364 STLTAPSPDTLAAHSQRSSHSSDS-EKTKSTCPEQATPNFLKRTTMDFPSV-GGERSSTS 421
           ++L + +P+ +A  SQ    + +S ++TK T  + +    L++ T++FPS  GGER+S++
Sbjct: 272 ASLGSSAPEAIAFLSQGGFGNKESNDRTKLTSSDHSATTSLEKKTLEFPSFGGGERTSST 331

Query: 422 YQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSP 481
             SP + SD + Q+TR +L LQLF+SSPE++S PK++SS KY+SS SSNP+E+RSPSSSP
Sbjct: 332 NHSPSQYSDSRGQDTRSSLSLQLFTSSPEEESRPKVASSTKYYSSASSNPVEDRSPSSSP 391

Query: 482 VVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAAD-NCSFQS 540
           V+Q  FP+ ++ ET         R  N        R S +PLELF  SN+ A  N ++  
Sbjct: 392 VMQELFPLHTSPET--------RRYNNYKDTSTSPRTSCLPLELFGASNRGATANPNYNV 443

Query: 541 FPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPS 600
             +Q+GY +SSGSD+SP SLNS+AQ+ TG+I FKLF+KDPSQ P TLR EI+ WLS+ PS
Sbjct: 444 LRHQSGY-ASSGSDYSPPSLNSNAQERTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPS 502

Query: 601 EMESYIRPGCVILSLYVSMPYATWEQVSEVLF 632
           +MES+IRPGCVILS+YV+M  + WEQ+ E L 
Sbjct: 503 DMESFIRPGCVILSVYVAMSASAWEQLEENLL 534

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z8M8|SPL15_ORYSJ Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1

 Score =  430 bits (1106), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 291/689 (42%), Positives = 384/689 (55%), Gaps = 88/689 (12%)

Query: 3   EVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSY---QAQSQNHYGGEQQNWNP 59
           EVG QVAP + +HQ           +    T AKKR   +      +    GG   NWNP
Sbjct: 4   EVGPQVAPPMFLHQ--------IQPLPPHATAAKKRGNPWPAAAVAAAEAKGG--GNWNP 53

Query: 60  KLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSA 119
           ++WDWDS     KP  D+    LR+    +     +              ++G   +   
Sbjct: 54  RMWDWDSRALTAKPSSDA----LRVNAGLSHHQQQQQQSPPAAAKAAEALRQGGGGSGGL 109

Query: 120 VTVGNVEDDGRLDLNLGGGLTAVDVEQP--------EPPVVTSKPNKRVRSGSPGTAP-- 169
                + +D    +++    T V             + PVV  +P+KRVRSGSPG+A   
Sbjct: 110 NLQLGLREDAATPMDVSPAATTVSSSPSPPASSAPAQEPVV--RPSKRVRSGSPGSASGG 167

Query: 170 ----------------YPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRF 213
                           YPMCQVD+C+ DL+NAKDYHRRHKVCE+H K+TKALVG QMQRF
Sbjct: 168 GGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRF 227

Query: 214 CQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVD 273
           CQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP D+ S++L+   GNQ N      D
Sbjct: 228 CQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPTDVASQLLL--PGNQENAANRTQD 285

Query: 274 IVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSL-------PLPADLAAKLHN 326
           IVNL+T +AR QG    +  S   +PD++ L+ I+SKINS+         P   A  L+ 
Sbjct: 286 IVNLITVIARLQGSNVGKLPSIPPIPDKDNLVQIISKINSINNGNSASKSPPSEAVDLNA 345

Query: 327 FGSLNRKTPVHTSTDVQNRLN----------------ENTSSPSTMDLLAVLSSTLTAPS 370
             S  + +   T+   + + N                +  + PSTMDLLAVLS+ L   +
Sbjct: 346 SHSQQQDSVQRTTNGFEKQTNGLDKQTNGFDKQADGFDKQAVPSTMDLLAVLSTALATSN 405

Query: 371 PDTLAAHSQRSSHSSDSEKTKSTCPEQA-TPNFLKRTTMDFPSV----GGERSSTSYQSP 425
           PD+  + SQ SS SS + K+KS   E A   N  +++   F +       ERS   Y+ P
Sbjct: 406 PDSNTSQSQGSSDSSGNNKSKSQSTEPANVVNSHEKSIRVFSATRKNDALERSPEMYKQP 465

Query: 426 VEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSS-PVVQ 484
                  +QET   L L+LF S+ E+D P K+ ++ KY SS+SSNP++ERSPSSS PV  
Sbjct: 466 -------DQETPPYLSLRLFGST-EEDVPCKMDTANKYLSSESSNPLDERSPSSSPPVTH 517

Query: 485 TFFPMQSTSETVKSEKLSIGREVNANVEGNRSRG-SIMPLELFRGSNKAADNCSFQSFPY 543
            FFP++S  E  +      G ++ A VE + SR     PLELF+ S +  +N S  +  Y
Sbjct: 518 KFFPIRSVDEDARIA--DYGEDI-ATVEVSTSRAWRAPPLELFKDSERPIENGSPPNPAY 574

Query: 544 QAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEME 603
           Q+ YTS+S SDHSPS+ NSD QD TGRIIFKLF K+PS  PG LR EI NWL +SP+EME
Sbjct: 575 QSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNWLKHSPNEME 634

Query: 604 SYIRPGCVILSLYVSMPYATWEQVSEVLF 632
            YIRPGC++LS+Y+SMP   W+++ E L 
Sbjct: 635 GYIRPGCLVLSMYLSMPAIAWDELEENLL 663

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YX04|SPL15_ORYSI Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1

 Score =  430 bits (1106), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 291/689 (42%), Positives = 384/689 (55%), Gaps = 88/689 (12%)

Query: 3   EVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSY---QAQSQNHYGGEQQNWNP 59
           EVG QVAP + +HQ           +    T AKKR   +      +    GG   NWNP
Sbjct: 4   EVGPQVAPPMFLHQ--------IQPLPPHATAAKKRGNPWPAAAVAAAEAKGG--GNWNP 53

Query: 60  KLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSA 119
           ++WDWDS     KP  D+    LR+    +     +              ++G   +   
Sbjct: 54  RMWDWDSRALTAKPSSDA----LRVNAGLSHHQQQQQQSPPAAAKAAEALRQGGGGSGGL 109

Query: 120 VTVGNVEDDGRLDLNLGGGLTAVDVEQP--------EPPVVTSKPNKRVRSGSPGTAP-- 169
                + +D    +++    T V             + PVV  +P+KRVRSGSPG+A   
Sbjct: 110 NLQLGLREDAATPMDVSPAATTVSSSPSPPASSAPAQEPVV--RPSKRVRSGSPGSASGG 167

Query: 170 ----------------YPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRF 213
                           YPMCQVD+C+ DL+NAKDYHRRHKVCE+H K+TKALVG QMQRF
Sbjct: 168 GGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRF 227

Query: 214 CQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVD 273
           CQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP D+ S++L+   GNQ N      D
Sbjct: 228 CQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPTDVASQLLL--PGNQENAANRTQD 285

Query: 274 IVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSL-------PLPADLAAKLHN 326
           IVNL+T +AR QG    +  S   +PD++ L+ I+SKINS+         P   A  L+ 
Sbjct: 286 IVNLITVIARLQGSNVGKLPSIPPIPDKDNLVQIISKINSINNGNSASKSPPSEAVDLNA 345

Query: 327 FGSLNRKTPVHTSTDVQNRLN----------------ENTSSPSTMDLLAVLSSTLTAPS 370
             S  + +   T+   + + N                +  + PSTMDLLAVLS+ L   +
Sbjct: 346 SHSQQQDSVQRTTNGFEKQTNGLDKQTNGFDKQADGFDKQAVPSTMDLLAVLSTALATSN 405

Query: 371 PDTLAAHSQRSSHSSDSEKTKSTCPEQA-TPNFLKRTTMDFPSV----GGERSSTSYQSP 425
           PD+  + SQ SS SS + K+KS   E A   N  +++   F +       ERS   Y+ P
Sbjct: 406 PDSNTSQSQGSSDSSGNNKSKSQSTEPANVVNSHEKSIRVFSATRKNDALERSPEMYKQP 465

Query: 426 VEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSS-PVVQ 484
                  +QET   L L+LF S+ E+D P K+ ++ KY SS+SSNP++ERSPSSS PV  
Sbjct: 466 -------DQETPPYLSLRLFGST-EEDVPCKMDTANKYLSSESSNPLDERSPSSSPPVTH 517

Query: 485 TFFPMQSTSETVKSEKLSIGREVNANVEGNRSRG-SIMPLELFRGSNKAADNCSFQSFPY 543
            FFP++S  E  +      G ++ A VE + SR     PLELF+ S +  +N S  +  Y
Sbjct: 518 KFFPIRSVDEDARIA--DYGEDI-ATVEVSTSRAWRAPPLELFKDSERPIENGSPPNPAY 574

Query: 544 QAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEME 603
           Q+ YTS+S SDHSPS+ NSD QD TGRIIFKLF K+PS  PG LR EI NWL +SP+EME
Sbjct: 575 QSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNWLKHSPNEME 634

Query: 604 SYIRPGCVILSLYVSMPYATWEQVSEVLF 632
            YIRPGC++LS+Y+SMP   W+++ E L 
Sbjct: 635 GYIRPGCLVLSMYLSMPAIAWDELEENLL 663

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1

 Score =  166 bits (420), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/225 (42%), Positives = 125/225 (55%), Gaps = 21/225 (9%)

Query: 44  AQSQNHYGG------------EQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATAS- 90
           AQS++ YGG                W+   W WDS  FV  PV  ++   L L  + +S 
Sbjct: 8   AQSRHLYGGGLGEPDMDRRDKRLFGWDLNDWRWDSDRFVATPVPAAEASGLALNSSPSSS 67

Query: 91  -ESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNVEDDG--RLDLNLGGGLTAVDVEQP 147
            E+   +  N+N   + + +K+        V    + ++G   L L +GG   A      
Sbjct: 68  EEAGAASVRNVNARGDSDKRKRVVVIDDDDVEDDELVENGGGSLSLRIGGDAVAHGAGVG 127

Query: 148 EPPVVTSKPNKRVR--SGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKAL 205
                  +  K++R   GSP     P CQV+ C  DL+  +DYHRRHKVCE+H+K+T A+
Sbjct: 128 GGADEEDRNGKKIRVQGGSPSG---PACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAV 184

Query: 206 VGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPE 250
           VG  +QRFCQQCSRFHPL EFDEGKRSCRRRLAGHNRRRRKT+PE
Sbjct: 185 VGNTVQRFCQQCSRFHPLQEFDEGKRSCRRRLAGHNRRRRKTRPE 229

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9S7P5|SPL12_ARATH Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1

 Score =  162 bits (410), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/187 (47%), Positives = 111/187 (59%), Gaps = 22/187 (11%)

Query: 109 QKKGNTTTTSAVTVGNVEDDG--RLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPG 166
           +KK    T  A+   N++DD   RL LNLGG              +     K+ + G   
Sbjct: 73  KKKRRAVTVVAMEEDNLKDDDAHRLTLNLGGN------------NIEGNGVKKTKLGGGI 120

Query: 167 TAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEF 226
            +    CQVDNC  DLS  KDYHRRHKVCE+HSK+T ALVG  MQRFCQQCSRFH L EF
Sbjct: 121 PSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEF 180

Query: 227 DEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHG-NQSNNPTANVDIVNLLTALARAQ 285
           DEGKRSCRRRLAGHN+RRRK  P+ I       G+G + S++ T+N  ++ LL  L+   
Sbjct: 181 DEGKRSCRRRLAGHNKRRRKANPDTI-------GNGTSMSDDQTSNYMLITLLKILSNIH 233

Query: 286 GKTEDRS 292
               D++
Sbjct: 234 SNQSDQT 240

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SMX9|SPL1_ARATH Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2

 Score =  157 bits (398), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/186 (46%), Positives = 111/186 (59%), Gaps = 33/186 (17%)

Query: 111 KGNTTTTSAVTVGNVEDDGRLDLNLGG---GLTAVDVEQPEPPVVTSKPNKRVRSGSPGT 167
           +GN     AV +   + +G L LNL G   GL                P K+ +SG+   
Sbjct: 64  EGNDKKRRAVAIQG-DTNGALTLNLNGESDGLF---------------PAKKTKSGA--- 104

Query: 168 APYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 227
               +CQV+NC+ DLS  KDYHRRHKVCE+HSK+T A VG  +QRFCQQCSRFH L EFD
Sbjct: 105 ----VCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFD 160

Query: 228 EGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGK 287
           EGKRSCRRRLAGHN+RRRKT PE          +GN S++ ++N  ++ LL  L+     
Sbjct: 161 EGKRSCRRRLAGHNKRRRKTNPEP-------GANGNPSDDHSSNYLLITLLKILSNMHNH 213

Query: 288 TEDRSI 293
           T D+ +
Sbjct: 214 TGDQDL 219

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Binds specifically to the 5'-GTAC-3' core sequence.

Arabidopsis thaliana (taxid: 3702)

>sp|P0DI11|SP13B_ARATH Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana GN=SPL13B PE=3 SV=1

 Score =  134 bits (336), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 65/87 (74%)

Query: 166 GTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSE 225
           GT   P+C VD C  D SN ++YH+RHKVC++HSK+    +    QRFCQQCSRFH L E
Sbjct: 94  GTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEE 153

Query: 226 FDEGKRSCRRRLAGHNRRRRKTQPEDI 252
           FDEGKRSCR+RL GHNRRRRK QPE I
Sbjct: 154 FDEGKRSCRKRLDGHNRRRRKPQPEHI 180

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|B9DI20|SP13A_ARATH Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana GN=SPL13A PE=2 SV=1

 Score =  134 bits (336), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 65/87 (74%)

Query: 166 GTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSE 225
           GT   P+C VD C  D SN ++YH+RHKVC++HSK+    +    QRFCQQCSRFH L E
Sbjct: 94  GTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEE 153

Query: 226 FDEGKRSCRRRLAGHNRRRRKTQPEDI 252
           FDEGKRSCR+RL GHNRRRRK QPE I
Sbjct: 154 FDEGKRSCRKRLDGHNRRRRKPQPEHI 180

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXL3|SPL8_ARATH Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV=2

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 78/122 (63%), Gaps = 11/122 (9%)

Query: 130 RLDLNLGGG--LTAVDVEQPEPPVVTSKPNKRVRSGSPGTA---PYPMCQVDNCKEDLSN 184
           R+ LNLGG    +A D +        S+  +R R G  G A     P CQ + C  DLS+
Sbjct: 146 RIGLNLGGRTYFSAADDD------FVSRLYRRSRPGESGMANSLSTPRCQAEGCNADLSH 199

Query: 185 AKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRR 244
           AK YHRRHKVCE HSK++  +     QRFCQQCSRFH LSEFD GKRSCR+RLA HNRRR
Sbjct: 200 AKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRR 259

Query: 245 RK 246
           RK
Sbjct: 260 RK 261

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Binds specifically to the 5'-GTAC-3' core sequence. Involved in development and floral organogenesis. Required for ovule differentiation, pollen production, filament elongation, seed formation and siliques elongation. Also seems to play a role in the formation of trichomes on sepals. May positively modulate gibberellin (GA) signaling in flower.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	639
255539362	1073	Squamosa promoter-binding protein, putat	0.943	0.561	0.686	0.0
225457689	1070	PREDICTED: squamosa promoter-binding-lik	0.938	0.560	0.675	0.0
224083384	603	predicted protein [Populus trichocarpa]	0.929	0.985	0.652	0.0
224065627	1044	predicted protein [Populus trichocarpa]	0.754	0.461	0.702	0.0
449455740	1031	PREDICTED: squamosa promoter-binding-lik	0.873	0.541	0.591	1e-180
449531663	1031	PREDICTED: LOW QUALITY PROTEIN: squamosa	0.873	0.541	0.589	1e-180
15218091	1035	squamosa promoter binding-like protein 1	0.884	0.545	0.533	1e-168
297845078	1040	hypothetical protein ARALYDRAFT_472338 [	0.887	0.545	0.546	1e-168
312283549	1035	unnamed protein product [Thellungiella h	0.879	0.542	0.546	1e-165
297745623	921	unnamed protein product [Vitis vinifera]	0.733	0.509	0.556	1e-155

>gi|255539362|ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis] gi|223551447|gb|EEF52933.1| Squamosa promoter-binding protein, putative [Ricinus communis]

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/637 (68%), Positives = 495/637 (77%), Gaps = 34/637 (5%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQQ---NW 57
           MEEVGAQVA  I +HQ LSSR C+A +M      AKKR LSYQ  +  H+   Q    NW
Sbjct: 1   MEEVGAQVASPIFIHQALSSRFCDAASM------AKKRDLSYQTSNFQHHRFPQNPRDNW 54

Query: 58  NPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTT 117
           NPK WDWDSV FV KP+ D+D  VL+LG A+ S+   KT  ++N+N    N         
Sbjct: 55  NPKAWDWDSVRFVAKPL-DADTNVLQLGTAS-SDHQKKTNASVNHNLTLKN--------- 103

Query: 118 SAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDN 177
            A   G+ EDDG L LNL G   AV     E PV  S+PNKRVRSGSPGTA YPMCQVDN
Sbjct: 104 -APPAGD-EDDG-LRLNLAGVFNAV-----EEPV--SRPNKRVRSGSPGTATYPMCQVDN 153

Query: 178 CKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRL 237
           CKEDLSNAKDYHRRHKVCELHSKST+ALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRL
Sbjct: 154 CKEDLSNAKDYHRRHKVCELHSKSTQALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRL 213

Query: 238 AGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSS 297
           AGHNRRRRKTQPED+TSR+L+ G  N+    +AN+DIVNLLTALAR QGK  D+ I+ SS
Sbjct: 214 AGHNRRRRKTQPEDVTSRLLLPG--NRDTASSANLDIVNLLTALARTQGKHADKRINASS 271

Query: 298 VPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMD 357
           +PDR+QL+ ILSKINSLPLP DLAA+L N GSLNRK P   S++ QNRL    SSPSTMD
Sbjct: 272 MPDRDQLIQILSKINSLPLPMDLAAQLSNIGSLNRKNPEQPSSEHQNRLLGTASSPSTMD 331

Query: 358 LLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQ-ATPNFLKRTTMDFPSVGGE 416
           LLAVLS+TL A +PD LA  SQRSS SSDSEK+K TC +Q A PN  KR  +DFPS+  E
Sbjct: 332 LLAVLSATLAASAPDALAFLSQRSSQSSDSEKSKLTCVDQDAGPNLQKRPIVDFPSMALE 391

Query: 417 RSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERS 476
           +SS+ YQSPVE+SD Q QE+  NLPLQLFSSSPE+ SPPKL+SSRKYFSSDSSNP E RS
Sbjct: 392 KSSSCYQSPVEESDCQLQESHPNLPLQLFSSSPEESSPPKLASSRKYFSSDSSNPSEGRS 451

Query: 477 PSSSP-VVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADN 535
           PSSSP V+Q  FP+QS ++TVKSEK+SI REVNAN+EG+RS GSI+PLELFRGS+  A  
Sbjct: 452 PSSSPPVMQKLFPLQSNADTVKSEKVSITREVNANIEGSRSHGSILPLELFRGSDGRAVQ 511

Query: 536 CSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWL 595
            S+QSFPYQAGYTSSSGSDHSPSS NSDAQD TGRIIFKLFDKDPS FPG LR +IYNWL
Sbjct: 512 SSYQSFPYQAGYTSSSGSDHSPSSQNSDAQDRTGRIIFKLFDKDPSHFPGKLRTQIYNWL 571

Query: 596 SNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLF 632
           SNSPSEMESYIRPGCV+LS+Y+SM  A WE++   L 
Sbjct: 572 SNSPSEMESYIRPGCVVLSVYLSMSSAKWERLERNLL 608

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457689|ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis vinifera]

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/640 (67%), Positives = 494/640 (77%), Gaps = 40/640 (6%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSY-----QAQSQNHYGGEQQ 55
           MEEVGAQVAP I +HQ LSSR  EA      + MAKKR L Y     Q Q    +   + 
Sbjct: 1   MEEVGAQVAPPIFIHQTLSSRFHEA------VPMAKKRDLPYPSSNFQHQHPQRFQNPRD 54

Query: 56  NWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTT 115
           NWNPK+WDWDSV FV  P+   + E+LRLG AT  ++  K             +K+  T 
Sbjct: 55  NWNPKVWDWDSVRFVANPL---ESELLRLGTATPVQTELK-------------KKQEGTG 98

Query: 116 TTSAVTVGNV-EDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQ 174
            T+A+    V EDD  L L LGGGL+++     E PV  S+P+KRVRSGSPG++ YPMCQ
Sbjct: 99  ITTALKKNPVDEDDESLRLKLGGGLSSI-----EEPV--SRPSKRVRSGSPGSSSYPMCQ 151

Query: 175 VDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCR 234
           VDNC+EDLSNAKDYHRRHKVCE+HSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCR
Sbjct: 152 VDNCREDLSNAKDYHRRHKVCEMHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCR 211

Query: 235 RRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSIS 294
           RRLAGHNRRRRKTQPED++SR+L+   GN+ N    N+DIVNLLTALAR QG  E +S +
Sbjct: 212 RRLAGHNRRRRKTQPEDVSSRLLL--PGNRDNTGNRNLDIVNLLTALARTQGNNEVKSAN 269

Query: 295 CSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPS 354
            SSVPDR+QL+ ILSK+NSLPLPAD AAKL   GSLNR TP  +S++ QNRLN  TSSPS
Sbjct: 270 NSSVPDRDQLIQILSKLNSLPLPADFAAKLPISGSLNRNTPGQSSSEHQNRLNGKTSSPS 329

Query: 355 TMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQAT-PNFLKRTTMDFPSV 413
           TMDLLAVLS+TL A +PD LA  SQRSS SSDSEKTK TC +QAT P+  KR T++FPSV
Sbjct: 330 TMDLLAVLSATLAASAPDALAFLSQRSSQSSDSEKTKLTCLDQATGPDLQKRQTLEFPSV 389

Query: 414 GGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIE 473
           GGERSSTSYQSP+EDSD Q QET+ NLPLQLFSSS EDDSPPKL S+RKYFSSDSSNP+E
Sbjct: 390 GGERSSTSYQSPMEDSDCQVQETQPNLPLQLFSSSLEDDSPPKLGSARKYFSSDSSNPME 449

Query: 474 ERSPSSS-PVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKA 532
           ERSPSSS PVVQ  FPMQ++ ETVK E++SI  EVN N+   R+ G+   LELFR S++ 
Sbjct: 450 ERSPSSSPPVVQKLFPMQASMETVKPERMSISGEVNGNIGAGRAHGAT-SLELFRRSDRG 508

Query: 533 ADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIY 592
           ADN + QSFPYQAGYTSSSGSDHSPSSLNSDAQD TGRIIFKLFDKDPS FPGTLR EIY
Sbjct: 509 ADNGAVQSFPYQAGYTSSSGSDHSPSSLNSDAQDRTGRIIFKLFDKDPSHFPGTLRTEIY 568

Query: 593 NWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLF 632
           NWL++SPSEMESYIRPGCV+LS+Y SM  A WEQ+ E L 
Sbjct: 569 NWLAHSPSEMESYIRPGCVVLSVYASMSSAAWEQLEENLL 608

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083384|ref|XP_002307005.1| predicted protein [Populus trichocarpa] gi|222856454|gb|EEE94001.1| predicted protein [Populus trichocarpa]

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/638 (65%), Positives = 484/638 (75%), Gaps = 44/638 (6%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQA---QSQNHYGGE---Q 54
           ME+VGAQVA  + +HQ LSSR C+        +MAKKR LSYQ    Q Q H+  E   +
Sbjct: 1   MEKVGAQVAAPMFIHQALSSRYCD------LASMAKKRDLSYQMPNFQLQQHHFLETSLE 54

Query: 55  QNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNT 114
           +NWN K WDWDSVGFV +P      E  RLG A+      K  D  +Y      + K N+
Sbjct: 55  KNWNSKAWDWDSVGFVARP--SDAAETSRLGTASRE---TKKKDESDY------KTKSNS 103

Query: 115 TTTSAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQ 174
                      EDDG     L  G +   VE+P      S+PNKRVRSGSP    YPMCQ
Sbjct: 104 AN---------EDDGL---GLNLGGSLTSVEEP-----VSRPNKRVRSGSPANGSYPMCQ 146

Query: 175 VDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCR 234
           VDNCKE+L+ AKDYHRRHKVCE+HSK+TKALVGKQMQRFCQQCSRFHPL+EFDEGKRSCR
Sbjct: 147 VDNCKENLTTAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHPLTEFDEGKRSCR 206

Query: 235 RRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSIS 294
           RRLAGHNRRRRKTQPED+TSR+L+ G  NQ  N   N+DIVNLLTALAR+QG+ +D+S +
Sbjct: 207 RRLAGHNRRRRKTQPEDVTSRLLVPG--NQDINSNGNLDIVNLLTALARSQGRADDKSTT 264

Query: 295 CSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPS 354
           C++VPD++QL+ ILSKINSLPLP DLAAKL N  SLN K P   S+  QNRL+   SS S
Sbjct: 265 CTTVPDKDQLIQILSKINSLPLPMDLAAKLSNIASLNGKNPDQPSSAHQNRLHGTASSSS 324

Query: 355 TMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFL-KRTTMDFPSV 413
           T+DLLAVLS+TL A +PD LA  SQRSS SSDS+K+K T P Q T + L KR+ ++FPSV
Sbjct: 325 TVDLLAVLSATLAASAPDALAILSQRSSQSSDSDKSKLTGPNQVTGSDLQKRSNIEFPSV 384

Query: 414 GGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIE 473
           GGER S  Y+SPVEDSD Q QE+R N PLQLFSSSPE+DSPPKL+SSRKYFSSDSSNPIE
Sbjct: 385 GGERVSYCYESPVEDSDCQIQESRPNFPLQLFSSSPENDSPPKLASSRKYFSSDSSNPIE 444

Query: 474 ERSPSSSP-VVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKA 532
           +RSPSSSP V Q  FP+QST+ET+KSEK+SI REVNANVEG+RS   ++PLELFRGSN+ 
Sbjct: 445 DRSPSSSPPVAQKLFPLQSTAETMKSEKMSISREVNANVEGSRSHACVLPLELFRGSNRE 504

Query: 533 ADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIY 592
            D+ SFQ+FPYQ GYTSSSGSDHSPSS NSD+QD TGR+IFKLFDKDPS FPGTLR +IY
Sbjct: 505 PDHGSFQNFPYQGGYTSSSGSDHSPSSQNSDSQDRTGRLIFKLFDKDPSHFPGTLRTQIY 564

Query: 593 NWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEV 630
           NWLSNSPSEMESYIRPGCV+LS+Y+SM  A WEQVSE+
Sbjct: 565 NWLSNSPSEMESYIRPGCVVLSVYLSMSSAAWEQVSEL 602

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065627|ref|XP_002301891.1| predicted protein [Populus trichocarpa] gi|222843617|gb|EEE81164.1| predicted protein [Populus trichocarpa]

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/501 (70%), Positives = 404/501 (80%), Gaps = 19/501 (3%)

Query: 144 VEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTK 203
           VE+P      S+PNKRVRSGSPG   YPMCQVDNCKEDLS AKDYHRRHKVC++HSK+TK
Sbjct: 83  VEEP-----VSRPNKRVRSGSPGNGSYPMCQVDNCKEDLSKAKDYHRRHKVCQVHSKATK 137

Query: 204 ALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGN 263
           ALVGKQMQRFCQQCSRFHPL+EFDEGKRSCRRRLAGHNRRRRKTQPED+TSR+L+ G+ +
Sbjct: 138 ALVGKQMQRFCQQCSRFHPLTEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSRLLLPGNPD 197

Query: 264 QSNNPTANVDIVNLLTALARAQGKTEDRSI----------SCSSVPDREQLLMILSKINS 313
            +NN   N+DIVNLLTALAR+QGKT    I          +C +VPD++QL+ IL+KINS
Sbjct: 198 MNNN--GNLDIVNLLTALARSQGKTYLPMIDFYVPPFVLTNCPTVPDKDQLIQILNKINS 255

Query: 314 LPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDT 373
           LPLP DLAAKL N  SLN K P       QNRLN   SSPST DLLAVLS+TL A +PD 
Sbjct: 256 LPLPMDLAAKLSNIASLNVKNPNQPYLGHQNRLNGTASSPSTNDLLAVLSTTLAASAPDA 315

Query: 374 LAAHSQRSSHSSDSEKTKSTCPEQAT-PNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQ 432
           LA  SQRSS SSD++K+K   P Q T P+  KR+ ++FP+VG ER S  Y+SP EDSD Q
Sbjct: 316 LAILSQRSSQSSDNDKSKLPGPNQVTVPHLQKRSNVEFPAVGVERISRCYESPAEDSDYQ 375

Query: 433 NQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSP-VVQTFFPMQS 491
            QE+R NLPLQLFSSSPE++S  K +SS KYFSSDSSNPIEERSPSSSP VVQ  FP+QS
Sbjct: 376 IQESRPNLPLQLFSSSPENESRQKPASSGKYFSSDSSNPIEERSPSSSPPVVQKLFPLQS 435

Query: 492 TSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTSSS 551
           T+ET+KSEK+S+ REVNANVEG+RS G ++PLELFRG N+  D+ SFQSFPY+ GYTSSS
Sbjct: 436 TAETMKSEKMSVSREVNANVEGDRSHGCVLPLELFRGPNREPDHSSFQSFPYRGGYTSSS 495

Query: 552 GSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCV 611
           GSDHSPSS NSD QD TGRIIFKLFDKDPS FPGTLR +IYNWLSNSPSEMESYIRPGCV
Sbjct: 496 GSDHSPSSQNSDPQDRTGRIIFKLFDKDPSHFPGTLRTKIYNWLSNSPSEMESYIRPGCV 555

Query: 612 ILSLYVSMPYATWEQVSEVLF 632
           +LS+Y+SMP A+WEQ+   L 
Sbjct: 556 VLSVYLSMPSASWEQLERNLL 576

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455740|ref|XP_004145609.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Cucumis sativus]

 Score =  639 bits (1647), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 375/634 (59%), Positives = 432/634 (68%), Gaps = 76/634 (11%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPK 60
           M++ GAQV P I +HQ L+SR  + P++       KKR LSY  Q Q H       WNPK
Sbjct: 1   MDDPGAQVVPPIFIHQSLTSRYTDLPSI------PKKRPLSYH-QGQLH----PHTWNPK 49

Query: 61  LWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAV 120
            WDWDS  F+ KP                         N+N           NTT     
Sbjct: 50  AWDWDSSKFLTKP------------------------SNLN-----------NTTLD--- 71

Query: 121 TVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKE 180
                + D  L LNLGG      VE P      SKP K+VR GSP +  YPMCQVDNCKE
Sbjct: 72  -----DHDDTLRLNLGGRY----VEDP-----VSKPPKKVRPGSPASVTYPMCQVDNCKE 117

Query: 181 DLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGH 240
           DLSNAKDYHRRHKVCELHSKS+KALV KQMQRFCQQCSRFHPLSEFD+GKRSCRRRLAGH
Sbjct: 118 DLSNAKDYHRRHKVCELHSKSSKALVAKQMQRFCQQCSRFHPLSEFDDGKRSCRRRLAGH 177

Query: 241 NRRRRKTQPEDITSRMLIHGHGNQSNNP--TANVDIVNLLTALARAQGKTEDRSISCSSV 298
           N RRRKTQPED+TSR+   G    S  P  T N+DIV+LLT LARAQGK ED+S+     
Sbjct: 178 NWRRRKTQPEDVTSRLTRPG----SRGPPSTGNLDIVSLLTVLARAQGKNEDQSVKSLLS 233

Query: 299 PDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDL 358
            + +QL+ IL+KINSLPLPADLAAKL N  +   K P  +S   QN+LN N SSPSTMDL
Sbjct: 234 ANSDQLIQILNKINSLPLPADLAAKLPNLENFKGKAPPQSSLQHQNKLNGNPSSPSTMDL 293

Query: 359 LAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGGERS 418
           L VLS+TL A +PD LA  SQ+SS SSDSEKT+S+CP  +    L+   ++ PSVGGERS
Sbjct: 294 LTVLSATLAASAPDALAMLSQKSSVSSDSEKTRSSCPSGSD---LQNRPLELPSVGGERS 350

Query: 419 STSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPS 478
           STSYQSP+EDSDGQ Q TRV LPLQLF SSPE D+PP L++SRKYFSSDSSNPIEERSPS
Sbjct: 351 STSYQSPMEDSDGQVQGTRVGLPLQLFGSSPEHDAPPNLTASRKYFSSDSSNPIEERSPS 410

Query: 479 SS-PVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCS 537
           SS P++QT FP+QST ET  + K+ I +EVN  VE  +   S +P ELFR  + A  N S
Sbjct: 411 SSPPLLQTLFPVQSTEETTSNGKMPIRKEVNG-VEVRKPPSSNIPFELFRELDGARPN-S 468

Query: 538 FQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSN 597
           FQ+  YQAGYTSS       SSLNSDAQD TGRI FKLF+KDPSQFPGTLR +IYNWLSN
Sbjct: 469 FQTIHYQAGYTSSGSDHSP-SSLNSDAQDRTGRISFKLFEKDPSQFPGTLRTQIYNWLSN 527

Query: 598 SPSEMESYIRPGCVILSLYVSMPYATWEQVSEVL 631
            PSEMESYIRPGCV+LS+Y+SM    WE++ E L
Sbjct: 528 CPSEMESYIRPGCVVLSVYMSMSSIAWERLEENL 561

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531663|ref|XP_004172805.1| PREDICTED: LOW QUALITY PROTEIN: squamosa promoter-binding-like protein 14-like [Cucumis sativus]

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 374/634 (58%), Positives = 431/634 (67%), Gaps = 76/634 (11%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPK 60
           M++ GAQV P I +HQ L+SR  + P++       KKR LSY  Q Q H       WNPK
Sbjct: 1   MDDPGAQVVPPIFIHQSLTSRYTDLPSI------PKKRPLSYH-QGQLH----PHTWNPK 49

Query: 61  LWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAV 120
            WDWDS  F+ KP                         N+N           NTT     
Sbjct: 50  AWDWDSSKFLTKP------------------------SNLN-----------NTTLD--- 71

Query: 121 TVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKE 180
                + D  L LNLGG      VE P      SKP K+VR GSP +  YPMCQVDNCKE
Sbjct: 72  -----DHDDTLRLNLGGRY----VEDP-----VSKPPKKVRPGSPASVTYPMCQVDNCKE 117

Query: 181 DLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGH 240
           DLSNAKDYHRRHKVCELHSKS+KALV KQMQRFCQQCSRFHPLSEFD+GKRSCRRRLAGH
Sbjct: 118 DLSNAKDYHRRHKVCELHSKSSKALVAKQMQRFCQQCSRFHPLSEFDDGKRSCRRRLAGH 177

Query: 241 NRRRRKTQPEDITSRMLIHGHGNQSNNP--TANVDIVNLLTALARAQGKTEDRSISCSSV 298
           N RRRKTQPED+TSR+   G    S  P  T N+DIV+LLT LARAQGK ED+S+     
Sbjct: 178 NWRRRKTQPEDVTSRLTRPG----SRGPPSTGNLDIVSLLTVLARAQGKNEDQSVKSLLS 233

Query: 299 PDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDL 358
            + +QL+ IL+KINSLPLPADLAAKL N  +   K P  +S   QN+LN N SSPSTMDL
Sbjct: 234 ANSDQLIQILNKINSLPLPADLAAKLPNLENFKGKAPPQSSLQHQNKLNGNPSSPSTMDL 293

Query: 359 LAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGGERS 418
           L VLS+TL A +PD LA  SQ+SS SSDSEK +S+CP  +    L+   ++ PSVGGERS
Sbjct: 294 LTVLSATLAASAPDALAMLSQKSSVSSDSEKXRSSCPSGSD---LQNRPLELPSVGGERS 350

Query: 419 STSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPS 478
           STSYQSP+EDSDGQ Q TRV LPLQLF SSPE D+PP L++SRKYFSSDSSNPIEERSPS
Sbjct: 351 STSYQSPMEDSDGQVQGTRVGLPLQLFGSSPEHDAPPNLTASRKYFSSDSSNPIEERSPS 410

Query: 479 SS-PVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCS 537
           SS P++QT FP+QST ET  + K+ I +EVN  VE  +   S +P ELFR  + A  N S
Sbjct: 411 SSPPLLQTLFPVQSTEETTSNGKMPIRKEVNG-VEVRKPPSSNIPFELFRELDGARPN-S 468

Query: 538 FQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSN 597
           FQ+  YQAGYTSS       SSLNSDAQD TGRI FKLF+KDPSQFPGTLR +IYNWLSN
Sbjct: 469 FQTIHYQAGYTSSGSDHSP-SSLNSDAQDRTGRISFKLFEKDPSQFPGTLRTQIYNWLSN 527

Query: 598 SPSEMESYIRPGCVILSLYVSMPYATWEQVSEVL 631
            PSEMESYIRPGCV+LS+Y+SM    WE++ E L
Sbjct: 528 CPSEMESYIRPGCVVLSVYMSMSSIAWERLEENL 561

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218091|ref|NP_173522.1| squamosa promoter binding-like protein 14 [Arabidopsis thaliana] gi|67461574|sp|Q8RY95.3|SPL14_ARATH RecName: Full=Squamosa promoter-binding-like protein 14; AltName: Full=Protein FUMONISIN B1-RESISTANT 6; AltName: Full=SPL1-related protein 2 gi|4836890|gb|AAD30593.1|AC007369_3 Unknown protein [Arabidopsis thaliana] gi|332191929|gb|AEE30050.1| squamosa promoter binding-like protein 14 [Arabidopsis thaliana]

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 347/650 (53%), Positives = 431/650 (66%), Gaps = 85/650 (13%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSY-------QAQSQNHYGGE 53
           M+EVGAQVA  + +HQ                ++ +KR L Y       Q+Q Q      
Sbjct: 1   MDEVGAQVAAPMFIHQ----------------SLGRKRDLYYPMSNRLVQSQPQ-----R 39

Query: 54  QQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGN 113
           +  WN K+WDWDS  F  KPV   D EV                                
Sbjct: 40  RDEWNSKMWDWDSRRFEAKPV---DVEVQEFD---------------------------- 68

Query: 114 TTTTSAVTVGNVEDDGR-LDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPM 172
                 +T+ N   + R LDLNLG GLTAV+        V  +PNK+VRSGSPG   YPM
Sbjct: 69  ------LTLRNRSGEERGLDLNLGSGLTAVEETTTTTQNV--RPNKKVRSGSPG-GNYPM 119

Query: 173 CQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRS 232
           CQVDNC EDLS+AKDYHRRHKVCE+HSK+TKALVGKQMQRFCQQCSRFH LSEFDEGKRS
Sbjct: 120 CQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 179

Query: 233 CRRRLAGHNRRRRKT-QPEDITSRMLIHGHGNQSNN-PTANVDIVNLLTALARAQGKTED 290
           CRRRLAGHNRRRRKT QPE++ S +++ G+ + +NN   AN+D++ LLTALA AQGK   
Sbjct: 180 CRRRLAGHNRRRRKTTQPEEVASGVVVPGNHDTTNNTANANMDLMALLTALACAQGKNAV 239

Query: 291 RS-ISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNEN 349
           +  +   +VPDREQLL IL+KIN+LPLP DL +KL+N GSL RK   H + + QN +N  
Sbjct: 240 KPPVGSPAVPDREQLLQILNKINALPLPMDLVSKLNNIGSLARKNMDHPTVNPQNDMN-- 297

Query: 350 TSSPSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMD 409
            +SPSTMDLLAVLS+TL + SPD LA  SQ    + DSEKTK +  E      L++ T  
Sbjct: 298 GASPSTMDLLAVLSTTLGSSSPDALAILSQGGFGNKDSEKTKLSSYENGVTTNLEKRTFG 357

Query: 410 FPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSS 469
           F SVGGERSS+S QSP +DSD + Q+TR +L LQLF+SSPED+S P ++SSRKY+SS SS
Sbjct: 358 FSSVGGERSSSSNQSPSQDSDSRGQDTRSSLSLQLFTSSPEDESRPTVASSRKYYSSASS 417

Query: 470 NPIEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGS 529
           NP+E+RSPSSSPV+Q  FP+Q++ ET++S+          N + +  R   +PLELF  S
Sbjct: 418 NPVEDRSPSSSPVMQELFPLQASPETMRSK----------NHKNSSPRTGCLPLELFGAS 467

Query: 530 NKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRK 589
           N+ A + +F+ F  Q+GY +SSGSD+SP SLNSDAQD TG+I+FKL DKDPSQ PGTLR 
Sbjct: 468 NRGAADPNFKGFGQQSGY-ASSGSDYSPPSLNSDAQDRTGKIVFKLLDKDPSQLPGTLRS 526

Query: 590 EIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLFCTFSISM 639
           EIYNWLSN PSEMESYIRPGCV+LS+YV+M  A WEQ+ + L     + +
Sbjct: 527 EIYNWLSNIPSEMESYIRPGCVVLSVYVAMSPAAWEQLEQKLLQRLGVLL 576

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845078|ref|XP_002890420.1| hypothetical protein ARALYDRAFT_472338 [Arabidopsis lyrata subsp. lyrata] gi|297336262|gb|EFH66679.1| hypothetical protein ARALYDRAFT_472338 [Arabidopsis lyrata subsp. lyrata]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 350/640 (54%), Positives = 425/640 (66%), Gaps = 73/640 (11%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSY-----QAQSQNHYGGEQQ 55
           M+EVGAQVA  + +H                  M KKR L Y       QSQ        
Sbjct: 1   MDEVGAQVAAPMFIHH----------------PMGKKRDLYYPMSNRLVQSQ----PRSD 40

Query: 56  NWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTT 115
            WN K+WDWDS  F  KPV   D EVLRLG                           N  
Sbjct: 41  EWNSKMWDWDSRRFEAKPV---DVEVLRLG---------------------------NEA 70

Query: 116 TTSAVTVGNVEDDGR-LDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQ 174
               +T+ N   + R LDLNLG GLTAV+ +         +P+K+VRSGSPG   YPMCQ
Sbjct: 71  QEFDLTLRNRSGEERGLDLNLGSGLTAVE-DLTTTTTQNGRPSKKVRSGSPG-GNYPMCQ 128

Query: 175 VDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCR 234
           VDNC EDLS+AKDYHRRHKVCE+HSK+TKALVGKQMQRFCQQCSRFH LSEFDEGKRSCR
Sbjct: 129 VDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCR 188

Query: 235 RRLAGHNRRRRKT-QPEDITSRMLIHGHGNQSNNPTAN-VDIVNLLTALARAQGKTEDRS 292
           RRLAGHNRRRRKT QPE++ S +++ G+ + +NN +   +D++ LLTALA AQGK   + 
Sbjct: 189 RRLAGHNRRRRKTTQPEEVASGVVVPGNRDNNNNTSTTNMDLMALLTALACAQGKNAVKP 248

Query: 293 ISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSS 352
               +VPDREQLL IL+KIN+LPLP DL +KL+N GSL RK   H + + QN +N   +S
Sbjct: 249 AGSPAVPDREQLLQILNKINALPLPMDLVSKLNNIGSLARKNMDHPTVNPQNDMN--GAS 306

Query: 353 PSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPS 412
           PSTMDLLAVLS+TL + SPD LA  SQ    + DSEKTK +  E      L++ T  F S
Sbjct: 307 PSTMDLLAVLSTTLGSSSPDALAILSQGGFGNKDSEKTKLSSYEHGVTTNLEKRTFGFSS 366

Query: 413 VGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPI 472
           VGGERSS+S QSP +DSD + Q+TR +L LQLF+SSPED+S P ++SSRKY+SS SSNP 
Sbjct: 367 VGGERSSSSNQSPSQDSDSRGQDTRSSLSLQLFTSSPEDESRPTVASSRKYYSSASSNPA 426

Query: 473 EERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKA 532
           E+RSPSSSPV+Q  FP+Q++ ET++S+          N      R   +PLELF  SN+ 
Sbjct: 427 EDRSPSSSPVMQELFPLQTSPETMRSK----------NHNNTSPRTGCLPLELFGASNRG 476

Query: 533 ADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIY 592
           A N +F+ F  Q+GY +SSGSD+SP SLNSDAQD TG+I+FKL DKDPSQ PGTLR EIY
Sbjct: 477 AANPNFKGFRQQSGY-ASSGSDYSPPSLNSDAQDRTGKIVFKLLDKDPSQLPGTLRSEIY 535

Query: 593 NWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLF 632
           NWLSN PSEMESYIRPGCV+LS+YV+M  A WEQ+ + L 
Sbjct: 536 NWLSNIPSEMESYIRPGCVVLSVYVAMSPAAWEQLEQNLL 575

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312283549|dbj|BAJ34640.1| unnamed protein product [Thellungiella halophila]

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 350/641 (54%), Positives = 431/641 (67%), Gaps = 79/641 (12%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSYQAQSQNHYGGEQ----QN 56
           M+EVGAQVA  I +HQ LS              M +KR+L YQ  ++      Q      
Sbjct: 1   MDEVGAQVAAPIFIHQSLS-------------PMGRKRNLYYQMSNRVAPSQPQPQRRDE 47

Query: 57  WNPKLWDWDSVGFVGKPVVDSDPEV-LRLGGATASESPNKTTDNINYNYNYNNQKKGNTT 115
           WN K+WDWDS  F  KPV   D EV LRLG  T               ++ N++K+G   
Sbjct: 48  WNSKMWDWDSRRFEAKPV---DAEVHLRLGNET--------------QFDLNSRKEG--- 87

Query: 116 TTSAVTVGNVEDDGRLDLNLGGGLTAV-DVEQPEPPVVTSKPNKRVRSGSPGTAP-YPMC 173
                     E+ G LDLNLG  L AV D+ Q       ++P+K+VRSGSPG+   YP+C
Sbjct: 88  ----------EERG-LDLNLGSCLNAVEDMTQ------ATRPSKKVRSGSPGSGGNYPVC 130

Query: 174 QVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSC 233
           QVDNC +DLS+AKDYHRRHKVCELHSK+TKALVGKQMQRFCQQCSRFH LSEFDEGKRSC
Sbjct: 131 QVDNCTQDLSHAKDYHRRHKVCELHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSC 190

Query: 234 RRRLAGHNRRRRK-TQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRS 292
           RRRLAGHNRRRRK TQPE+I S + +   GN  N    N+D++ LLT LA AQGK E + 
Sbjct: 191 RRRLAGHNRRRRKTTQPEEIASGVGV--PGNSDNTSIPNMDLMALLTTLACAQGKNEVKP 248

Query: 293 ISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSS 352
           +   +VP+REQLL IL+KIN+LPLP DL +KL+N GSL RK       + QN +  N +S
Sbjct: 249 MGSPAVPNREQLLQILNKINALPLPMDLVSKLNNIGSLARKNLDRPMVNPQNDM--NGAS 306

Query: 353 PSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTK-STCPEQATPNFLKRTTMDFP 411
           PSTMDLLAVLS+TL + SPD LA  SQ    + DS+ TK S+    AT N  K+T     
Sbjct: 307 PSTMDLLAVLSATLGSSSPDALAILSQGGFGNKDSDMTKLSSYDHGATTNLEKKT----- 361

Query: 412 SVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNP 471
            VGGERSS+S QSP +DSD   Q+TR +L LQLF+SSPED+S P ++SSRKY+SS SSNP
Sbjct: 362 -VGGERSSSSNQSPSQDSDSHAQDTRSSLSLQLFTSSPEDESRPTVASSRKYYSSASSNP 420

Query: 472 IEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNK 531
           +E+RSPSSSPV+Q  FP+Q++ ET++S+          +   N   G  +PLELF  SN+
Sbjct: 421 VEDRSPSSSPVMQELFPLQTSPETMRSKN---------HKNTNPRTGGCLPLELFGASNR 471

Query: 532 AADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEI 591
            A N +F+ F  Q+GY +SSGSD+SP SLNSDAQD TG+I+FKL DKDPSQ PGTLR EI
Sbjct: 472 GAANPNFKGFGQQSGY-ASSGSDYSPPSLNSDAQDRTGKIVFKLLDKDPSQLPGTLRTEI 530

Query: 592 YNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLF 632
           YNWLS+ PSEMESYIRPGCV+LS+YV+M  A WE++ + L 
Sbjct: 531 YNWLSSIPSEMESYIRPGCVVLSVYVAMSPAAWEELEQNLL 571

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745623|emb|CBI40788.3| unnamed protein product [Vitis vinifera]

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 355/638 (55%), Positives = 397/638 (62%), Gaps = 169/638 (26%)

Query: 1   MEEVGAQVAPSILMHQRLSSRLCEAPTMTMTMTMAKKRHLSY-----QAQSQNHYGGEQQ 55
           MEEVGAQVAP I +HQ LSSR  EA      + MAKKR L Y     Q Q    +   + 
Sbjct: 1   MEEVGAQVAPPIFIHQTLSSRFHEA------VPMAKKRDLPYPSSNFQHQHPQRFQNPRD 54

Query: 56  NWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTT 115
           NWNPK+WDWDSV FV  P+   + E+LRLG AT S                         
Sbjct: 55  NWNPKVWDWDSVRFVANPL---ESELLRLGTATPS------------------------- 86

Query: 116 TTSAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQV 175
                          L L LGGGL+++     E PV  S+P+KRVRSGSPG++ YPMCQV
Sbjct: 87  ---------------LRLKLGGGLSSI-----EEPV--SRPSKRVRSGSPGSSSYPMCQV 124

Query: 176 DNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRR 235
           DNC+EDLSNAKDYHRRHKVCE+HSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRR
Sbjct: 125 DNCREDLSNAKDYHRRHKVCEMHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRR 184

Query: 236 RLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISC 295
           RLAGHNRRRRKTQPED++SR+L+   GN+ N    N+DIVNLLTALAR QG  E +S + 
Sbjct: 185 RLAGHNRRRRKTQPEDVSSRLLL--PGNRDNTGNRNLDIVNLLTALARTQGNNEVKSANN 242

Query: 296 SSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPST 355
           SSVPDR+QL+ ILSK+NSLPLPAD AAKL   GSLNR TP  +S++ QNRLN  TSSPST
Sbjct: 243 SSVPDRDQLIQILSKLNSLPLPADFAAKLPISGSLNRNTPGQSSSEHQNRLNGKTSSPST 302

Query: 356 MDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGG 415
           MDLLAVLS+TL A +PD LA  SQRSS SSDSEK                          
Sbjct: 303 MDLLAVLSATLAASAPDALAFLSQRSSQSSDSEK-------------------------- 336

Query: 416 ERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEER 475
               T+YQSP+EDSD Q                              YFSSDSSNP+EER
Sbjct: 337 ----TNYQSPMEDSDCQ------------------------------YFSSDSSNPMEER 362

Query: 476 SPSSS-PVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAAD 534
           SPSSS PVVQ                                                AD
Sbjct: 363 SPSSSPPVVQKL---------------------------------------------GAD 377

Query: 535 NCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNW 594
           N + QSFPYQAGYTSSSGSDHSPSSLNSDAQD TGRIIFKLFDKDPS FPGTLR EIYNW
Sbjct: 378 NGAVQSFPYQAGYTSSSGSDHSPSSLNSDAQDRTGRIIFKLFDKDPSHFPGTLRTEIYNW 437

Query: 595 LSNSPSEMESYIRPGCVILSLYVSMPYATWEQVSEVLF 632
           L++SPSEMESYIRPGCV+LS+Y SM  A WEQ+ E L 
Sbjct: 438 LAHSPSEMESYIRPGCVVLSVYASMSSAAWEQLEENLL 475

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	639
TAIR|locus:2037355	1035	SPL14 "squamosa promoter bindi	0.741	0.457	0.533	2.2e-135
TAIR|locus:2011706	988	AT1G76580 [Arabidopsis thalian	0.740	0.478	0.493	4.2e-115
TAIR|locus:2041329	881	SPL1 "squamosa promoter bindin	0.194	0.140	0.463	2.1e-43
TAIR|locus:2101402	927	SPL12 "squamosa promoter-bindi	0.176	0.121	0.512	1.3e-41
TAIR|locus:2159717	359	SPL13A "SQUAMOSA PROMOTER-BIND	0.164	0.292	0.485	2.1e-23
TAIR|locus:2832472	359	SPL13B "SQUAMOSA PROMOTER-BIND	0.164	0.292	0.485	2.1e-23
TAIR|locus:504956101	333	SPL8 "squamosa promoter bindin	0.125	0.240	0.578	1.8e-20
TAIR|locus:2087105	181	SPL5 "squamosa promoter bindin	0.123	0.436	0.569	6.4e-20
TAIR|locus:2026428	405	AT1G69170 [Arabidopsis thalian	0.120	0.190	0.576	7.1e-19
TAIR|locus:2016014	396	SPL10 "squamosa promoter bindi	0.140	0.227	0.521	1.9e-18

TAIR|locus:2037355 SPL14 "squamosa promoter binding protein-like 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 1250 (445.1 bits), Expect = 2.2e-135, Sum P(2) = 2.2e-135
 Identities = 262/491 (53%), Positives = 324/491 (65%)

Query:   144 VEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTK 203
             VE+        +PNK+VRSGSPG   YPMCQVDNC EDLS+AKDYHRRHKVCE+HSK+TK
Sbjct:    92 VEETTTTTQNVRPNKKVRSGSPG-GNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATK 150

Query:   204 ALVGKQMQRFCQQCSRFHPLSEFDEGKRSCXXXXXXXXXXXXKT-QPEDITSRMLIHG-H 261
             ALVGKQMQRFCQQCSRFH LSEFDEGKRSC            KT QPE++ S +++ G H
Sbjct:   151 ALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEVASGVVVPGNH 210

Query:   262 GNQSNNPTANVDIVNLLTALARAQGKTEDRS-ISCSSVPDREQLLMILSKINSLPLPADL 320
                +N   AN+D++ LLTALA AQGK   +  +   +VPDREQLL IL+KIN+LPLP DL
Sbjct:   211 DTTNNTANANMDLMALLTALACAQGKNAVKPPVGSPAVPDREQLLQILNKINALPLPMDL 270

Query:   321 AAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHXXX 380
              +KL+N GSL RK   H + + QN +N   +SPSTMDLLAVLS+TL + SPD LA     
Sbjct:   271 VSKLNNIGSLARKNMDHPTVNPQNDMNG--ASPSTMDLLAVLSTTLGSSSPDALAILSQG 328

Query:   381 XXXXXXXXXXXXXCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNL 440
                            E      L++ T  F SVGGERSS+S QSP +DSD + Q+TR +L
Sbjct:   329 GFGNKDSEKTKLSSYENGVTTNLEKRTFGFSSVGGERSSSSNQSPSQDSDSRGQDTRSSL 388

Query:   441 PLQLFSSSPEDDSPPKLXXXXXXXXXXXXNPIEERSPSSSPVVQTFFPMQSTSETVKSEK 500
              LQLF+SSPED+S P +            NP+E+RSPSSSPV+Q  FP+Q++ ET++S+ 
Sbjct:   389 SLQLFTSSPEDESRPTVASSRKYYSSASSNPVEDRSPSSSPVMQELFPLQASPETMRSK- 447

Query:   501 LSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTXXXXXXXXXXXX 560
                      N + +  R   +PLELF  SN+ A + +F+ F  Q+GY             
Sbjct:   448 ---------NHKNSSPRTGCLPLELFGASNRGAADPNFKGFGQQSGYASSGSDYSPPSLN 498

Query:   561 XXDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMP 620
               DAQD TG+I+FKL DKDPSQ PGTLR EIYNWLSN PSEMESYIRPGCV+LS+YV+M 
Sbjct:   499 S-DAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAMS 557

Query:   621 YATWEQVSEVL 631
              A WEQ+ + L
Sbjct:   558 PAAWEQLEQKL 568

GO:0003677 "DNA binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2011706 AT1G76580 [Arabidopsis thaliana (taxid:3702)]

 Score = 1117 (398.3 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
 Identities = 247/501 (49%), Positives = 320/501 (63%)

Query:   143 DVEQPEPPVVTSKPNKRVRSGSPGTAP-----YPMCQVDNCKEDLSNAKDYHRRHKVCEL 197
             DVE    PV  ++P+K+VRSGSPG+       YP CQVDNCKEDLS AKDYHRRHKVCE+
Sbjct:    49 DVEGT--PVDLTRPSKKVRSGSPGSGGGGGGNYPKCQVDNCKEDLSIAKDYHRRHKVCEV 106

Query:   198 HSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCXXXXXXXXXXXXKTQPEDITSRML 257
             HSK+TKALVGKQMQRFCQQCSRFH LSEFDEGKRSC            KTQP+ ITS+++
Sbjct:   107 HSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRRRKTQPDAITSQVV 166

Query:   258 -IHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPL 316
              +    N SNN   N+D++ LLTAL  AQG+ E  +     VP REQLL IL+KI +LPL
Sbjct:   167 ALENRDNTSNN--TNMDVMALLTALVCAQGRNEATTNGSPGVPQREQLLQILNKIKALPL 224

Query:   317 PADLAAKLHNFGSLNRKTPVHTST-DVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLA 375
             P +L +KL+N G L RK P   S  + QN +N   SSPSTMDLLA LS++L + +P+ +A
Sbjct:   225 PMNLTSKLNNIGILARKNPEQPSPMNPQNSMN-GASSPSTMDLLAALSASLGSSAPEAIA 283

Query:   376 --AHXXXXXXXXXXXXXXXXCPEQATPNFLKRTTMDFPSVGG-ERSSTSYQSPVEDSDGQ 432
               +                     AT + L++ T++FPS GG ER+S++  SP + SD +
Sbjct:   284 FLSQGGFGNKESNDRTKLTSSDHSATTS-LEKKTLEFPSFGGGERTSSTNHSPSQYSDSR 342

Query:   433 NQETRVNLPLQLFSSSPEDDSPPKLXXXXXXXXXXXXNPIEERSPSSSPVVQTFFPMQST 492
              Q+TR +L LQLF+SSPE++S PK+            NP+E+RSPSSSPV+Q  FP+ ++
Sbjct:   343 GQDTRSSLSLQLFTSSPEEESRPKVASSTKYYSSASSNPVEDRSPSSSPVMQELFPLHTS 402

Query:   493 SETVKSEKLSIGREVNANVEGNRS-RGSIMPLELFRGSNKAAD-NCSFQSFPYQAGYTXX 550
              ET         R  N   + + S R S +PLELF  SN+ A  N ++    +Q+GY   
Sbjct:   403 PET---------RRYNNYKDTSTSPRTSCLPLELFGASNRGATANPNYNVLRHQSGYASS 453

Query:   551 XXXXXXXXXXXXDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGC 610
                         +AQ+ TG+I FKLF+KDPSQ P TLR EI+ WLS+ PS+MES+IRPGC
Sbjct:   454 GSDYSPPSLNS-NAQERTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESFIRPGC 512

Query:   611 VILSLYVSMPYATWEQVSEVL 631
             VILS+YV+M  + WEQ+ E L
Sbjct:   513 VILSVYVAMSASAWEQLEENL 533

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2041329 SPL1 "squamosa promoter binding protein-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 307 (113.1 bits), Expect = 2.1e-43, Sum P(3) = 2.1e-43
 Identities = 64/138 (46%), Positives = 83/138 (60%)

Query:   156 PNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQ 215
             P K+ +SG+       +CQV+NC+ DLS  KDYHRRHKVCE+HSK+T A VG  +QRFCQ
Sbjct:    96 PAKKTKSGA-------VCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQ 148

Query:   216 QCSRFHPLSEFDEGKRSCXXXXXXXXXXXXKTQPEDITSRMLIHGHGNQSNNPTANVDIV 275
             QCSRFH L EFDEGKRSC            KT PE          +GN S++ ++N  ++
Sbjct:   149 QCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPEP-------GANGNPSDDHSSNYLLI 201

Query:   276 NLLTALARAQGKTEDRSI 293
              LL  L+     T D+ +
Sbjct:   202 TLLKILSNMHNHTGDQDL 219

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

TAIR|locus:2101402 SPL12 "squamosa promoter-binding protein-like 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
 Identities = 62/121 (51%), Positives = 75/121 (61%)

Query:   173 CQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRS 232
             CQVDNC  DLS  KDYHRRHKVCE+HSK+T ALVG  MQRFCQQCSRFH L EFDEGKRS
Sbjct:   127 CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRS 186

Query:   233 CXXXXXXXXXXXXKTQPEDITSRMLIHGHG-NQSNNPTANVDIVNLLTALARAQGKTEDR 291
             C            K  P+ I       G+G + S++ T+N  ++ LL  L+       D+
Sbjct:   187 CRRRLAGHNKRRRKANPDTI-------GNGTSMSDDQTSNYMLITLLKILSNIHSNQSDQ 239

Query:   292 S 292
             +
Sbjct:   240 T 240

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2159717 SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 2.1e-23, P = 2.1e-23
 Identities = 51/105 (48%), Positives = 61/105 (58%)

Query:   148 EPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVG 207
             +P    S  +KR R    GT   P+C VD C  D SN ++YH+RHKVC++HSK+    + 
Sbjct:    76 KPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 135

Query:   208 KQMQRFCQQCSRFHPLSEFDEGKRSCXXXXXXXXXXXXKTQPEDI 252
                QRFCQQCSRFH L EFDEGKRSC            K QPE I
Sbjct:   136 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2832472 SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 2.1e-23, P = 2.1e-23
 Identities = 51/105 (48%), Positives = 61/105 (58%)

Query:   148 EPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVG 207
             +P    S  +KR R    GT   P+C VD C  D SN ++YH+RHKVC++HSK+    + 
Sbjct:    76 KPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 135

Query:   208 KQMQRFCQQCSRFHPLSEFDEGKRSCXXXXXXXXXXXXKTQPEDI 252
                QRFCQQCSRFH L EFDEGKRSC            K QPE I
Sbjct:   136 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHI 180

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0048653 "anther development" evidence=IMP

TAIR|locus:504956101 SPL8 "squamosa promoter binding protein-like 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 1.8e-20, P = 1.8e-20
 Identities = 48/83 (57%), Positives = 55/83 (66%)

Query:   154 SKPNKRVRSGSPGTA---PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQM 210
             S+  +R R G  G A     P CQ + C  DLS+AK YHRRHKVCE HSK++  +     
Sbjct:   166 SRLYRRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLS 225

Query:   211 QRFCQQCSRFHPLSEFDEGKRSC 233
             QRFCQQCSRFH LSEFD GKRSC
Sbjct:   226 QRFCQQCSRFHLLSEFDNGKRSC 248

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0009554 "megasporogenesis" evidence=IMP

GO:0009556 "microsporogenesis" evidence=IMP

GO:0048653 "anther development" evidence=IGI

TAIR|locus:2087105 SPL5 "squamosa promoter binding protein-like 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 244 (91.0 bits), Expect = 6.4e-20, P = 6.4e-20
 Identities = 45/79 (56%), Positives = 55/79 (69%)

Query:   155 KPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFC 214
             K  +RVR  S    P  +CQVD C  +L+ AK Y+RRH+VCE+H+K++ A V    QRFC
Sbjct:    45 KVMERVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFC 104

Query:   215 QQCSRFHPLSEFDEGKRSC 233
             QQCSRFH L EFDE KRSC
Sbjct:   105 QQCSRFHELPEFDEAKRSC 123

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010321 "regulation of vegetative phase change" evidence=IMP

TAIR|locus:2026428 AT1G69170 [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 7.1e-19, P = 7.1e-19
 Identities = 45/78 (57%), Positives = 60/78 (76%)

Query:   156 PNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQ 215
             P+K+ R+ +   +  P+CQV  C +DLS++KDYH+RH+VCE HSK++  +V    QRFCQ
Sbjct:   108 PSKKSRASNL-CSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQ 166

Query:   216 QCSRFHPLSEFDEGKRSC 233
             QCSRFH LSEFD+GKRSC
Sbjct:   167 QCSRFHFLSEFDDGKRSC 184

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2016014 SPL10 "squamosa promoter binding protein-like 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 1.9e-18, P = 1.9e-18
 Identities = 49/94 (52%), Positives = 61/94 (64%)

Query:   140 TAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHS 199
             +AV +    P VV  K  K    G   +   P CQ+D C+ DLS++KDYHR+H+VCE HS
Sbjct:   147 SAVSMNLLTPSVVARKKTKSC--GQ--SMQVPRCQIDGCELDLSSSKDYHRKHRVCETHS 202

Query:   200 KSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSC 233
             K  K +V    +RFCQQCSRFH +SEFDE KRSC
Sbjct:   203 KCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSC 236

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010358 "leaf shaping" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00051637 hypothetical protein (603 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	639
pfam03110	79	pfam03110, SBP, SBP domain	1e-53

>gnl|CDD|190527 pfam03110, SBP, SBP domain

 Score =  177 bits (451), Expect = 1e-53
 Identities = 61/79 (77%), Positives = 65/79 (82%)

Query: 172 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKR 231
            CQV+ C  DLSNAKDYHRRHKVCE+HSK+   LV    QRFCQQCSRFH LSEFDEGKR
Sbjct: 1   RCQVEGCGADLSNAKDYHRRHKVCEVHSKAPVVLVSGLEQRFCQQCSRFHLLSEFDEGKR 60

Query: 232 SCRRRLAGHNRRRRKTQPE 250
           SCRRRLAGHN RRRK QP+
Sbjct: 61  SCRRRLAGHNERRRKPQPD 79

SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands. Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	639
PF03110	79	SBP: SBP domain; InterPro: IPR004333 The SBP plant	100.0

>PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain []

Probab=100.00  E-value=1.1e-37  Score=265.36  Aligned_cols=78  Identities=65%  Similarity=1.119  Sum_probs=63.1

Q ss_pred             ccccCCCchhhcccchhhcccccchhhcccceeeeCCchhhhhhhhccccCCCccccccchHHHHHHHHHHhhccCCC
Q 006595          172 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP  249 (639)
Q Consensus       172 ~CQVdGC~adLs~~K~YhrRhrVCe~H~KA~~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rLa~Hn~RRRk~qp  249 (639)
                      +||||||++||+.+|.||+||||||.|+||++|+++|+.+||||||+|||+|+||||+|||||++|++||+||||.++
T Consensus         1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~   78 (79)
T PF03110_consen    1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ   78 (79)
T ss_dssp             C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred             CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999999865

Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	639
1wj0_A	60	Solution Structure Of The Dna-Binding Domain Of Squ		1e-22
1ul4_A	94	Solution Structure Of The Dna-Binding Domain Of Squ		6e-21
1ul5_A	88	Solution Structure Of The Dna-binding Domain Of Squ		2e-13

>pdb|1WJ0|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 12 Lacking The Second Zinc- Binding Site Length = 60

Iteration: 1
 Score =  105 bits (261), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/55 (80%), Positives = 46/55 (83%)
Query: 173 CQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 227
           CQVDNC  DLS  KDYHRRHKVCE+HSK+T ALVG  MQRFCQQCSRFH L EFD
Sbjct: 6   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

>pdb|1UL4|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 Length = 94

Iteration: 1
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/71 (59%), Positives = 51/71 (71%)
Query: 163 GSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHP 222
           GS G++   +CQVD C  D+  AK YHRRHKVCE+H+K++   +    QRFCQQCSRFH 
Sbjct: 1   GSSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHD 60
Query: 223 LSEFDEGKRSC 233
           L EFDE KRSC
Sbjct: 61  LQEFDEAKRSC 71

>pdb|1UL5|A Chain A, Solution Structure Of The Dna-binding Domain Of Squamosa Promoter Binding Protein-like 7 Length = 88

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 173 CQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRS 232
           CQV +C+ D+S  K YH+RH+VC   + ++  ++  + +R+CQQC +FH L +FDEGKRS
Sbjct: 6   CQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRS 65
Query: 233 C 233
           C
Sbjct: 66  C 66

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	639
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	3e-42
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	2e-39
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	2e-33

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 94

 Score =  146 bits (370), Expect = 3e-42
 Identities = 56/93 (60%), Positives = 66/93 (70%)

Query: 163 GSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHP 222
           GS G++   +CQVD C  D+  AK YHRRHKVCE+H+K++   +    QRFCQQCSRFH 
Sbjct: 1   GSSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHD 60

Query: 223 LSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSR 255
           L EFDE KRSCRRRLAGHN RRRK+  E   S 
Sbjct: 61  LQEFDEAKRSCRRRLAGHNERRRKSSGESGPSS 93

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 88

 Score =  138 bits (349), Expect = 2e-39
 Identities = 36/83 (43%), Positives = 55/83 (66%)

Query: 168 APYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 227
                CQV +C+ D+S  K YH+RH+VC   + ++  ++  + +R+CQQC +FH L +FD
Sbjct: 1   GSVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFD 60

Query: 228 EGKRSCRRRLAGHNRRRRKTQPE 250
           EGKRSCRR+L  HN RR++   +
Sbjct: 61  EGKRSCRRKLERHNNRRKRKPVD 83

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 60

 Score =  121 bits (305), Expect = 2e-33
 Identities = 44/57 (77%), Positives = 46/57 (80%)

Query: 171 PMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 227
             CQVDNC  DLS  KDYHRRHKVCE+HSK+T ALVG  MQRFCQQCSRFH L EFD
Sbjct: 4   ICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	639
1ul4_A	94	SPL4, squamosa promoter binding protein-like 4; tr	100.0
1ul5_A	88	SPL7, squamosa promoter binding protein-like 7; tr	100.0
1wj0_A	60	Squamosa promoter-binding protein-like 12; DNA-bin	99.96

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=1.5e-41  Score=295.70  Aligned_cols=91  Identities=60%  Similarity=1.044  Sum_probs=80.4

Q ss_pred             CCCCCCCCccccCCCchhhcccchhhcccccchhhcccceeeeCCchhhhhhhhccccCCCccccccchHHHHHHHHHHh
Q 006595          164 SPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRR  243 (639)
Q Consensus       164 ~~g~~~~~~CQVdGC~adLs~~K~YhrRhrVCe~H~KA~~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rLa~Hn~R  243 (639)
                      ++|+++.++||||||.+||+.+|+||+||||||.|+||++|+|+|+++||||||+|||+|+|||++|||||+||++||+|
T Consensus         2 ~~~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~R   81 (94)
T 1ul4_A            2 SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNER   81 (94)
T ss_dssp             ------CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCC
T ss_pred             CCCCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHH
Confidence            34557889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCchhhc
Q 006595          244 RRKTQPEDITS  254 (639)
Q Consensus       244 RRk~qp~~~~~  254 (639)
                      |||++++...+
T Consensus        82 RRk~~~~~~~~   92 (94)
T 1ul4_A           82 RRKSSGESGPS   92 (94)
T ss_dssp             CCSCCCC----
T ss_pred             hccCCCCcCCC
Confidence            99999987653

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=100.00  E-value=9.8e-40  Score=281.54  Aligned_cols=82  Identities=44%  Similarity=0.928  Sum_probs=78.0

Q ss_pred             CCCccccCCCchhhcccchhhcccccchhhcccceeeeCCchhhhhhhhccccCCCccccccchHHHHHHHHHHhhccCC
Q 006595          169 PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQ  248 (639)
Q Consensus       169 ~~~~CQVdGC~adLs~~K~YhrRhrVCe~H~KA~~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rLa~Hn~RRRk~q  248 (639)
                      ..++||||||++||+.+|+||+||||||.|+||++|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++
T Consensus         2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~   81 (88)
T 1ul5_A            2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP   81 (88)
T ss_dssp             -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred             CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999988765


Q ss_pred             Cc
Q 006595          249 PE  250 (639)
Q Consensus       249 p~  250 (639)
                      .+
T Consensus        82 ~~   83 (88)
T 1ul5_A           82 VD   83 (88)
T ss_dssp             CS
T ss_pred             cc
Confidence            55

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1

Probab=99.96  E-value=8.7e-31  Score=212.31  Aligned_cols=59  Identities=75%  Similarity=1.229  Sum_probs=57.1

Q ss_pred             CCCccccCCCchhhcccchhhcccccchhhcccceeeeCCchhhhhhhhccccCCCccc
Q 006595          169 PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD  227 (639)
Q Consensus       169 ~~~~CQVdGC~adLs~~K~YhrRhrVCe~H~KA~~V~v~G~~qRFCQQCsRFH~L~EFD  227 (639)
                      +.++||||||++||+.+|+|||||||||.|+||++|+++|+++||||||+|||+|+|||
T Consensus         2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD   60 (60)
T 1wj0_A            2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   60 (60)
T ss_dssp             -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence            56799999999999999999999999999999999999999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	639
d1ul4a_	81	g.72.1.1 (A:) Squamosa promoter binding protein-li	8e-47
d1ul5a_	86	g.72.1.1 (A:) Squamosa promoter binding protein-li	1e-46
d1wj0a_	58	g.72.1.1 (A:) Squamosa-promoter binding-like prote	2e-33

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 81

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  157 bits (398), Expect = 8e-47
 Identities = 52/80 (65%), Positives = 60/80 (75%)

Query: 171 PMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGK 230
            +CQVD C  D+  AK YHRRHKVCE+H+K++   +    QRFCQQCSRFH L EFDE K
Sbjct: 2   RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAK 61

Query: 231 RSCRRRLAGHNRRRRKTQPE 250
           RSCRRRLAGHN RRRK+  E
Sbjct: 62  RSCRRRLAGHNERRRKSSGE 81

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  157 bits (398), Expect = 1e-46
 Identities = 36/80 (45%), Positives = 55/80 (68%)

Query: 171 PMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGK 230
             CQV +C+ D+S  K YH+RH+VC   + ++  ++  + +R+CQQC +FH L +FDEGK
Sbjct: 2   ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGK 61

Query: 231 RSCRRRLAGHNRRRRKTQPE 250
           RSCRR+L  HN RR++   +
Sbjct: 62  RSCRRKLERHNNRRKRKPVD 81

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 58

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  119 bits (300), Expect = 2e-33
 Identities = 44/56 (78%), Positives = 46/56 (82%)

Query: 172 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 227
            CQVDNC  DLS  KDYHRRHKVCE+HSK+T ALVG  MQRFCQQCSRFH L EFD
Sbjct: 3   CCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	639
d1ul4a_	81	Squamosa promoter binding protein-like 4, DNA-bind	100.0
d1ul5a_	86	Squamosa promoter binding protein-like 7, DNA-bind	100.0
d1wj0a_	58	Squamosa-promoter binding-like protein 12, DNA-bin	99.96

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.3e-40  Score=277.97  Aligned_cols=80  Identities=65%  Similarity=1.152  Sum_probs=78.1

Q ss_pred             CccccCCCchhhcccchhhcccccchhhcccceeeeCCchhhhhhhhccccCCCccccccchHHHHHHHHHHhhccCCCc
Q 006595          171 PMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPE  250 (639)
Q Consensus       171 ~~CQVdGC~adLs~~K~YhrRhrVCe~H~KA~~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rLa~Hn~RRRk~qp~  250 (639)
                      .+||||||++||+.+|+||+||||||.|+||++|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++++
T Consensus         2 ~~CqVdgC~~dls~~k~YhrRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~   81 (81)
T d1ul4a_           2 RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE   81 (81)
T ss_dssp             CCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC
T ss_pred             CeeeeCCCcchHHhhHHhhhhhHHHHHHcCCCeEEECCeechHHHHhcccccHHHhccccccHHHHHHHHhHHhccCCCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999875

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.1e-40  Score=281.39  Aligned_cols=83  Identities=43%  Similarity=0.900  Sum_probs=80.7

Q ss_pred             CccccCCCchhhcccchhhcccccchhhcccceeeeCCchhhhhhhhccccCCCccccccchHHHHHHHHHHhhccCCCc
Q 006595          171 PMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPE  250 (639)
Q Consensus       171 ~~CQVdGC~adLs~~K~YhrRhrVCe~H~KA~~V~v~G~~qRFCQQCsRFH~L~EFDg~KRSCR~rLa~Hn~RRRk~qp~  250 (639)
                      ++||||||++||+.+|+||+||||||.|+||++|+|+|+++||||||+|||+|+|||++|||||+||++||+||||++++
T Consensus         2 ~rCqV~gC~~dls~~k~Y~rRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~~   81 (86)
T d1ul5a_           2 ARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVD   81 (86)
T ss_dssp             CSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSCS
T ss_pred             CeeeeCCCcchhhhCHHhhhhhHHHHHhcCCCeEEECCeechHHHHhccccChhhhccccccHHHHHHHHHHHhccCCcc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hhh
Q 006595          251 DIT  253 (639)
Q Consensus       251 ~~~  253 (639)
                      ++.
T Consensus        82 ~~g   84 (86)
T d1ul5a_          82 KGG   84 (86)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            654

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa-promoter binding-like protein 12, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=7.5e-31  Score=209.54  Aligned_cols=57  Identities=77%  Similarity=1.282  Sum_probs=55.8

Q ss_pred             CccccCCCchhhcccchhhcccccchhhcccceeeeCCchhhhhhhhccccCCCccc
Q 006595          171 PMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD  227 (639)
Q Consensus       171 ~~CQVdGC~adLs~~K~YhrRhrVCe~H~KA~~V~v~G~~qRFCQQCsRFH~L~EFD  227 (639)
                      .+||||||++||+.+|+|||||||||.|+||++|+|+|++|||||||+|||+|+|||
T Consensus         2 ~~CqV~gC~~dl~~~k~YhrRhkvCe~H~ka~~V~v~G~~~RFCQQCsrFH~L~eFD   58 (58)
T d1wj0a_           2 ICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD   58 (58)
T ss_dssp             EECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred             ceeEeCCcchhhhhhHHhcchhhHHHHhcCCCeEEECCcccccccccCCcccccccC
Confidence            369999999999999999999999999999999999999999999999999999998