Citrus Sinensis ID: 006656


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630------
MKKSKMRSEASSSSNNSNRKGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEMLDPESESDDDEPDTETSCQTVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALGSYL
ccccccccccccccccccccccEEEEcccccccccccccccccccEEEEEEcccccHHHHHHHHHHcccccccEEEccccccccccccEEEEccccccccHHHHHHHHHHHcccccccccccHHHcccccccccccccccccccccccccccccccHHHHHHHHHccccccccHHEEEccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccHHcccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccccccccccccccEEEEEEcccEEEEEEEEEccccccccEEEEEccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHccccc
ccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHccccccccEEEcccccccccccEEEEEccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccHcHHHHHHHcccccccccHHHcccccccHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHccccccccHHHHHcccccccccccccccccHHcccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccccccccccccccccccccEEEEEcccEEEEEEEEcccccccEEEEEEcccHHHccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccEccccccHHccccccEEEEEHHHHHHHHHcccEEEEcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccEEEEEcccccEEEHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccc
mkkskmrseassssnnsnrkgetvvgdcgtcrsscgyckssgrtsithglwaysvtvDDYQDLLDrgwrrsgsflykpdmertccpsytirlrasdfapskeqRRVSRRMQRFLDGTVDVEKKSVElikdpstsncnkvSSSVEnnslshnneennkEEEILQFLSGQIDNAVQLCIVRGqflsgiqlpkaSVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGqsiedtgpspKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKqasldedvhigtvskesaktceskggclknssehpqakRHKLQIRlkrssfdpqefELYRRYQIkvhndkpdqvtetsyrrflvdsplvfvppsgddtvppcgfgsfhqqyliddrlvaVGVIDilprclsskylfwdpdyaflsLGKYSALQEISWVkenqthcptlqyyYLGYYIHSCRKMrykaayhpsellcplryqwvpydiarplldrkpyvvLSDFaslqnesspcisenvmgcqhddigqgdsndvrmdydyddemldpesesdddepdtetscqtvgvedgdisnivirgqgtrvrYKDIQrvfgpiqrRSLESQLRKYMKVVGAELSERMVYALGSYL
mkkskmrseassssnnsnrkgetvvgdcgtcrSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRsgsflykpdmertCCPSytirlrasdfapskeqrrvsrrmqrfldgtvdvekksvelikdpstsncnkvssSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFlsgiqlpkasvkKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGqsiedtgpsPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKEsaktceskggclknssehpqakrhklqirlkrssfdpqeFELYRRYQikvhndkpdqvtETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEMLDPesesdddepdtetscqtvgvedgdisnivirgqgtrvrykdiqrvfgpiqrrslesQLRKYMKVVGAELSERMVYALGSYL
mkkskmrseassssnnsnrkGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTsncnkvsssvennslshnneennkeeeILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYddemldpesesdddepdtetSCQTVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALGSYL
***********************VVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRA******************************************************************ILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASL***VH*********************************************EFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDFASLQ*****CI***V**********************************************VGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYAL****
*************************GDCGTCRSSCGYCKSSGR*SITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTV*************************************************************************************************************************************************************ACNGH************************************************KLQIRLKRSSFDPQEFELYRRYQIKVH**********SYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVL******************************************************************VEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALGSYL
***************************CGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDF*********SRRMQRFLDGTVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFLSGIQLPK********AKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVS***************************LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEML******************TVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALGSYL
********************GETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGT*******************************************ILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKKVSQAK***********L*TSNIAFQLAATLN*********************TGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMK************************************AKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDF******************************************************************GDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALGSYL
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MKKSKMRSEASSSSNNSNRKGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEMLDPESESDDDEPDTETSCQTVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALGSYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query636 2.2.26 [Sep-21-2011]
Q9ZT48632 Arginyl-tRNA--protein tra yes no 0.954 0.960 0.537 0.0
O95260518 Arginyl-tRNA--protein tra yes no 0.281 0.345 0.494 1e-49
Q9Z2A5516 Arginyl-tRNA--protein tra yes no 0.301 0.372 0.472 2e-48
Q2PFX0518 Arginyl-tRNA--protein tra N/A no 0.281 0.345 0.494 9e-48
O96539484 Arginyl-tRNA--protein tra no no 0.286 0.376 0.479 5e-45
Q55EI0629 Arginyl-tRNA--protein tra yes no 0.091 0.092 0.593 2e-38
O14133391 Arginyl-tRNA--protein tra yes no 0.308 0.501 0.350 4e-28
P16639503 Arginyl-tRNA--protein tra yes no 0.264 0.333 0.335 2e-20
Q9I0M0235 Putative arginyl-tRNA--pr yes no 0.210 0.570 0.364 6e-16
Q02NB0235 Putative arginyl-tRNA--pr yes no 0.210 0.570 0.364 6e-16
>sp|Q9ZT48|ATE1_ARATH Arginyl-tRNA--protein transferase 1 OS=Arabidopsis thaliana GN=ATE1 PE=2 SV=2 Back     alignment and function desciption
 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/649 (53%), Positives = 454/649 (69%), Gaps = 42/649 (6%)

Query: 6   MRSEASSSSNN-SNRKGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLL 64
           ++++ASSS +  SNR  E+V+ D G  +S+CGYCKS  R+SI+HGL A ++TV DYQ L+
Sbjct: 3   LKNDASSSHDGGSNR--ESVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALI 60

Query: 65  DRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKS 124
           DRGWRRSG++LYK +M++TCCP YTIRL+ASDF P+KEQ+RVSRR++RFLDG +DV+ + 
Sbjct: 61  DRGWRRSGTYLYKHEMDKTCCPPYTIRLKASDFVPTKEQQRVSRRLERFLDGKLDVQPR- 119

Query: 125 VELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFLS 184
               +    S+   VS +      +  +EEN K E ++  LS  ID AVQLCI  G+F S
Sbjct: 120 ----EQRGASSSGDVSDTRRKTLGAAKSEENKKVEAVMDDLSKNIDQAVQLCIRSGEFPS 175

Query: 185 GIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQS 244
            +Q+PKASVKKV  A+RK L EG E +LYTSNIAF +AA + R Q +EK+         S
Sbjct: 176 NMQIPKASVKKVFCARRKKLAEGTEQILYTSNIAFPIAAAIKRIQTSEKEGIN------S 229

Query: 245 IEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDV-HIGTVSK 303
            E    SP+ I+  L S++ ++ ET  +SI+ C GH+NF S+ K +  D DV   G +S+
Sbjct: 230 AEGNRLSPETISEMLLSAMHKVGETPDVSIKVCKGHINFLSSAKDSFSDRDVVPNGNISR 289

Query: 304 ESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVT 363
            +     S+    K  SE+ QA++ KL+I LKRSSFDP+E ELY+RYQ+KVHNDKP  V 
Sbjct: 290 GANSLDGSETLHAKKDSENHQARKRKLEIHLKRSSFDPEEHELYKRYQLKVHNDKPGHVV 349

Query: 364 ETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYL 423
           E+SYRRFLVDSPL+ V PSGD+ VPPCGFGSFHQQY ID RL+AVGV+DILP+CLSS YL
Sbjct: 350 ESSYRRFLVDSPLIDVQPSGDEKVPPCGFGSFHQQYRIDGRLIAVGVVDILPKCLSSVYL 409

Query: 424 FWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 483
           FWDPDYAFLSLGKYSA+QEI+WV ENQ  CP+LQYYYLGYYIHSC KMRYKAAY PSELL
Sbjct: 410 FWDPDYAFLSLGKYSAIQEINWVIENQARCPSLQYYYLGYYIHSCSKMRYKAAYRPSELL 469

Query: 484 CPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESS--PCISENVM---GCQHDDIGQGD 538
           CPLR+QWVP+++ARP+LD+KPYV+LSD A   N+ S     SE ++     +H+D+ QG+
Sbjct: 470 CPLRFQWVPFEVARPMLDKKPYVILSDIAISHNQCSLLAGASETLVEPAASEHEDMEQGE 529

Query: 539 SNDVRMD---------------YDYDDEMLDPESESDDDEPDTETSCQTVGVEDGDISNI 583
           +ND  M                 D D+EM + ESE    E D        G +D DI+NI
Sbjct: 530 TNDNFMGCSDEDEDEDEDDDDDDDDDEEMYETESEDSHIESDP-------GSKDNDINNI 582

Query: 584 VIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYAL 632
           +I   G++ RYK+++++  P+ R+ LE  L+ Y KVVGAELSERMVY +
Sbjct: 583 LIGLYGSQYRYKEMRQIITPVGRKQLEPMLQSYRKVVGAELSERMVYEI 631




Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Does not arginylate cysteine residues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 2EC: .EC: 8
>sp|O95260|ATE1_HUMAN Arginyl-tRNA--protein transferase 1 OS=Homo sapiens GN=ATE1 PE=1 SV=2 Back     alignment and function description
>sp|Q9Z2A5|ATE1_MOUSE Arginyl-tRNA--protein transferase 1 OS=Mus musculus GN=Ate1 PE=1 SV=2 Back     alignment and function description
>sp|Q2PFX0|ATE1_MACFA Arginyl-tRNA--protein transferase 1 OS=Macaca fascicularis GN=ATE1 PE=2 SV=1 Back     alignment and function description
>sp|O96539|ATE1_DROME Arginyl-tRNA--protein transferase 1 OS=Drosophila melanogaster GN=Ate1 PE=2 SV=3 Back     alignment and function description
>sp|Q55EI0|ATE1_DICDI Arginyl-tRNA--protein transferase 1 OS=Dictyostelium discoideum GN=ate1 PE=3 SV=1 Back     alignment and function description
>sp|O14133|ATE1_SCHPO Arginyl-tRNA--protein transferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.07c PE=3 SV=3 Back     alignment and function description
>sp|P16639|ATE1_YEAST Arginyl-tRNA--protein transferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATE1 PE=1 SV=2 Back     alignment and function description
>sp|Q9I0M0|ATE_PSEAE Putative arginyl-tRNA--protein transferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ate PE=3 SV=1 Back     alignment and function description
>sp|Q02NB0|ATE_PSEAB Putative arginyl-tRNA--protein transferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ate PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query636
225448390640 PREDICTED: arginyl-tRNA--protein transfe 0.952 0.946 0.657 0.0
255571911629 Arginyl-tRNA--protein transferase, putat 0.946 0.957 0.658 0.0
356568461612 PREDICTED: arginyl-tRNA--protein transfe 0.957 0.995 0.638 0.0
224112529596 predicted protein [Populus trichocarpa] 0.893 0.953 0.640 0.0
356539953619 PREDICTED: arginyl-tRNA--protein transfe 0.965 0.991 0.633 0.0
357461181626 Metallocarboxypeptidase inhibitor [Medic 0.962 0.977 0.615 0.0
224098539537 predicted protein [Populus trichocarpa] 0.834 0.988 0.657 0.0
297833912602 hypothetical protein ARALYDRAFT_478464 [ 0.929 0.981 0.542 0.0
449441312636 PREDICTED: arginyl-tRNA--protein transfe 0.979 0.979 0.562 0.0
449526968636 PREDICTED: arginyl-tRNA--protein transfe 0.979 0.979 0.560 0.0
>gi|225448390|ref|XP_002271416.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/624 (65%), Positives = 486/624 (77%), Gaps = 18/624 (2%)

Query: 22  ETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME 81
           E+VV D G  RS+CGYC+S  RTSI+HGLWA+S+TVDDYQDLLDRGWRRSGSFLYKP+ME
Sbjct: 23  ESVVVDVGRRRSTCGYCRSGARTSISHGLWAHSITVDDYQDLLDRGWRRSGSFLYKPEME 82

Query: 82  RTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTSNC----- 136
           RTCCPSYTIRLRA DF PSKEQ RVS+RMQRF DGT+ V+K+  ++   P TS       
Sbjct: 83  RTCCPSYTIRLRADDFVPSKEQLRVSKRMQRFQDGTLSVKKQD-KINDGPKTSKSSGSSI 141

Query: 137 -NKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKK 195
            ++VS S    +L+  +EE NK E  + +LS QIDNAV  C   G+FL  IQLPKASVK 
Sbjct: 142 HHEVSGSAAKGTLAGKDEEKNKVEAFMHYLSDQIDNAVCACTESGEFLCDIQLPKASVKM 201

Query: 196 VSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPS---- 251
           V  AKRKL VEG E+LLY+SNI+FQ+AATL RAQ AEKDV   ++   + E+   S    
Sbjct: 202 VLPAKRKLQVEGSEDLLYSSNISFQIAATLRRAQSAEKDVPHSKLSRHNAEEDVSSIAFL 261

Query: 252 PKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKESAKTCES 311
           PK IA KLASSL  +A+ SG+ IRACNGH+NFYSA K   L E + I   +KES     S
Sbjct: 262 PKTIAEKLASSLNHMAKVSGMLIRACNGHINFYSARKGNFLSEGIQIVNGAKESPTGSGS 321

Query: 312 KGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFL 371
           +GGCLK SSE PQ KR KL+IRLKRSSFDP+EF LYRRYQIKVHND P+ V E+SYRRFL
Sbjct: 322 EGGCLKKSSECPQGKRRKLEIRLKRSSFDPEEFALYRRYQIKVHNDTPEHVMESSYRRFL 381

Query: 372 VDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAF 431
           VD+PLVFVPP+GDDTVPPCGFGSFHQQY+ID RLVAVGVIDILPRCLSSKYLFWDPD AF
Sbjct: 382 VDTPLVFVPPTGDDTVPPCGFGSFHQQYVIDGRLVAVGVIDILPRCLSSKYLFWDPDLAF 441

Query: 432 LSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
           LSLGKYSALQEI W+KENQ HCP+L+YYYLGYYIHSC KMRYKAAY PSELLCPLRYQWV
Sbjct: 442 LSLGKYSALQEIGWIKENQAHCPSLEYYYLGYYIHSCSKMRYKAAYRPSELLCPLRYQWV 501

Query: 492 PYDIARPLLDRKPYVVLSDFASLQN-ESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDD 550
           P+DIARPLLDR+PYVVLSDFA LQN ES+P + EN+M  QH+ + + D+ND+      D+
Sbjct: 502 PFDIARPLLDRQPYVVLSDFAVLQNGESTPHVPENLMEMQHNGLNEEDANDID-----DE 556

Query: 551 EMLDPESESDDDEPDTETSCQT-VGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSL 609
           EM D +  + DDE D+E +  T V +EDGD+SN++I  + + VR+KD+Q  FGP +R  L
Sbjct: 557 EMDDADFVNSDDESDSEANGPTSVEIEDGDVSNVLIGLKRSCVRFKDLQHAFGPSERAYL 616

Query: 610 ESQLRKYMKVVGAELSERMVYALG 633
           E+QLR+YM+ VGAE++ RMVY+LG
Sbjct: 617 ETQLRRYMRAVGAEVAGRMVYSLG 640




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571911|ref|XP_002526898.1| Arginyl-tRNA--protein transferase, putative [Ricinus communis] gi|223533797|gb|EEF35529.1| Arginyl-tRNA--protein transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356568461|ref|XP_003552429.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|224112529|ref|XP_002316221.1| predicted protein [Populus trichocarpa] gi|222865261|gb|EEF02392.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356539953|ref|XP_003538457.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357461181|ref|XP_003600872.1| Metallocarboxypeptidase inhibitor [Medicago truncatula] gi|355489920|gb|AES71123.1| Metallocarboxypeptidase inhibitor [Medicago truncatula] Back     alignment and taxonomy information
>gi|224098539|ref|XP_002311211.1| predicted protein [Populus trichocarpa] gi|222851031|gb|EEE88578.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297833912|ref|XP_002884838.1| hypothetical protein ARALYDRAFT_478464 [Arabidopsis lyrata subsp. lyrata] gi|297330678|gb|EFH61097.1| hypothetical protein ARALYDRAFT_478464 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449441312|ref|XP_004138426.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449526968|ref|XP_004170485.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query636
TAIR|locus:2166454632 ATE1 "arginine-tRNA protein tr 0.941 0.947 0.523 2e-166
TAIR|locus:2074718605 ATE2 "arginine-tRNA protein tr 0.691 0.727 0.537 6.1e-126
UNIPROTKB|F5GXE4511 ATE1 "Arginyl-tRNA--protein tr 0.281 0.350 0.510 6.4e-79
UNIPROTKB|H0Y5C2515 ATE1 "Arginyl-tRNA--protein tr 0.281 0.347 0.494 1.7e-78
UNIPROTKB|O95260518 ATE1 "Arginyl-tRNA--protein tr 0.281 0.345 0.494 1.7e-78
UNIPROTKB|E1BI60518 ATE1 "Arginyl-tRNA--protein tr 0.281 0.345 0.510 3.5e-78
MGI|MGI:1333870516 Ate1 "arginyltransferase 1" [M 0.283 0.348 0.502 2.4e-77
UNIPROTKB|E1BVG9527 ATE1 "Arginyl-tRNA--protein tr 0.281 0.339 0.510 2.4e-77
UNIPROTKB|F1SEH8516 ATE1 "Arginyl-tRNA--protein tr 0.281 0.346 0.505 3e-77
UNIPROTKB|E2RS45522 ATE1 "Arginyl-tRNA--protein tr 0.281 0.342 0.510 4.9e-77
TAIR|locus:2166454 ATE1 "arginine-tRNA protein transferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1619 (575.0 bits), Expect = 2.0e-166, P = 2.0e-166
 Identities = 328/626 (52%), Positives = 424/626 (67%)

Query:    22 ETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME 81
             E+V+ D G  +S+CGYCKS  R+SI+HGL A ++TV DYQ L+DRGWRRSG++LYK +M+
Sbjct:    18 ESVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALIDRGWRRSGTYLYKHEMD 77

Query:    82 RTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTXXXXXXXX 141
             +TCCP YTIRL+ASDF P+KEQ+RVSRR++RFLDG +DV+ +     +            
Sbjct:    78 KTCCPPYTIRLKASDFVPTKEQQRVSRRLERFLDGKLDVQPR-----EQRGASSSGDVSD 132

Query:   142 XXXXXXXXXXXXXXXXXXXILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKKVSQAKR 201
                                ++  LS  ID AVQLCI  G+F S +Q+PKASVKKV  A+R
Sbjct:   133 TRRKTLGAAKSEENKKVEAVMDDLSKNIDQAVQLCIRSGEFPSNMQIPKASVKKVFCARR 192

Query:   202 KLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFG-QSIEDTGPSPKIIAAKLA 260
             K L EG E +LYTSNIAF +AA + R Q +EK+       G  S E    SP+ I+  L 
Sbjct:   193 KKLAEGTEQILYTSNIAFPIAAAIKRIQTSEKE-------GINSAEGNRLSPETISEMLL 245

Query:   261 SSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDV-HIGTVSKESAKTCESKGGCLKNS 319
             S++ ++ ET  +SI+ C GH+NF S+ K +  D DV   G +S+ +     S+    K  
Sbjct:   246 SAMHKVGETPDVSIKVCKGHINFLSSAKDSFSDRDVVPNGNISRGANSLDGSETLHAKKD 305

Query:   320 SEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFV 379
             SE+ QA++ KL+I LKRSSFDP+E ELY+RYQ+KVHNDKP  V E+SYRRFLVDSPL+ V
Sbjct:   306 SENHQARKRKLEIHLKRSSFDPEEHELYKRYQLKVHNDKPGHVVESSYRRFLVDSPLIDV 365

Query:   380 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 439
              PSGD+ VPPCGFGSFHQQY ID RL+AVGV+DILP+CLSS YLFWDPDYAFLSLGKYSA
Sbjct:   366 QPSGDEKVPPCGFGSFHQQYRIDGRLIAVGVVDILPKCLSSVYLFWDPDYAFLSLGKYSA 425

Query:   440 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPL 499
             +QEI+WV ENQ  CP+LQYYYLGYYIHSC KMRYKAAY PSELLCPLR+QWVP+++ARP+
Sbjct:   426 IQEINWVIENQARCPSLQYYYLGYYIHSCSKMRYKAAYRPSELLCPLRFQWVPFEVARPM 485

Query:   500 LDRKPYVVLSDFASLQNESSPCI--SENVM---GCQHDDIGQGDSNDVRM-------DYD 547
             LD+KPYV+LSD A   N+ S     SE ++     +H+D+ QG++ND  M       D D
Sbjct:   486 LDKKPYVILSDIAISHNQCSLLAGASETLVEPAASEHEDMEQGETNDNFMGCSDEDEDED 545

Query:   548 YXXXXXXXXXXXXXXXXXXXXSCQT-VGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQR 606
                                    ++  G +D DI+NI+I   G++ RYK+++++  P+ R
Sbjct:   546 EDDDDDDDDDEEMYETESEDSHIESDPGSKDNDINNILIGLYGSQYRYKEMRQIITPVGR 605

Query:   607 RSLESQLRKYMKVVGAELSERMVYAL 632
             + LE  L+ Y KVVGAELSERMVY +
Sbjct:   606 KQLEPMLQSYRKVVGAELSERMVYEI 631




GO:0004057 "arginyltransferase activity" evidence=IEA;ISS;IMP
GO:0005634 "nucleus" evidence=ISM
GO:0016598 "protein arginylation" evidence=IEA;ISS
GO:0010150 "leaf senescence" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IGI
GO:0010029 "regulation of seed germination" evidence=IGI
GO:0050994 "regulation of lipid catabolic process" evidence=IGI
GO:0006816 "calcium ion transport" evidence=RCA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
TAIR|locus:2074718 ATE2 "arginine-tRNA protein transferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F5GXE4 ATE1 "Arginyl-tRNA--protein transferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y5C2 ATE1 "Arginyl-tRNA--protein transferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O95260 ATE1 "Arginyl-tRNA--protein transferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BI60 ATE1 "Arginyl-tRNA--protein transferase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1333870 Ate1 "arginyltransferase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BVG9 ATE1 "Arginyl-tRNA--protein transferase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SEH8 ATE1 "Arginyl-tRNA--protein transferase 1" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RS45 ATE1 "Arginyl-tRNA--protein transferase 1" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZT48ATE1_ARATH2, ., 3, ., 2, ., 80.53770.95440.9604yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.2LOW CONFIDENCE prediction!
3rd Layer2.3.2.80.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00101842
hypothetical protein (596 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query636
pfam04377128 pfam04377, ATE_C, Arginine-tRNA-protein transferas 1e-55
COG2935253 COG2935, COG2935, Putative arginyl-tRNA:protein ar 7e-36
PRK01305240 PRK01305, PRK01305, arginyl-tRNA-protein transfera 1e-35
pfam0437678 pfam04376, ATE_N, Arginine-tRNA-protein transferas 9e-27
PRK01305240 PRK01305, PRK01305, arginyl-tRNA-protein transfera 1e-10
COG2935253 COG2935, COG2935, Putative arginyl-tRNA:protein ar 8e-08
>gnl|CDD|218050 pfam04377, ATE_C, Arginine-tRNA-protein transferase, C terminus Back     alignment and domain information
 Score =  184 bits (470), Expect = 1e-55
 Identities = 59/149 (39%), Positives = 74/149 (49%), Gaps = 22/149 (14%)

Query: 341 PQEFELYRRYQIKVHNDKP-DQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQY 399
            + + LY RYQ   H D          Y  FL DSPL                G+   +Y
Sbjct: 1   EEHYALYERYQRARHADGGMYPPDREQYASFLEDSPL----------------GTRFLEY 44

Query: 400 LIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYY 459
            +D +L+AV V DILP  LS+ Y F+DPDY+  SLG YS L +I   KE       L Y 
Sbjct: 45  RLDGKLIAVAVTDILPDGLSAVYTFYDPDYSKRSLGTYSILWQIELAKELG-----LPYV 99

Query: 460 YLGYYIHSCRKMRYKAAYHPSELLCPLRY 488
           YLGY+I  C KM YKA + P E+L P  +
Sbjct: 100 YLGYWIKGCPKMNYKARFRPLEILDPGGW 128


This family represents the C terminal region of the enzyme arginine-tRNA-protein transferase (EC 2.3.2.8), which catalyzes the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N-end rule pathway of protein degradation by conjugating a destabilising amino acid to the amino terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N terminal cysteine is sometimes modified. Length = 128

>gnl|CDD|225486 COG2935, COG2935, Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|234939 PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional Back     alignment and domain information
>gnl|CDD|202988 pfam04376, ATE_N, Arginine-tRNA-protein transferase, N terminus Back     alignment and domain information
>gnl|CDD|234939 PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional Back     alignment and domain information
>gnl|CDD|225486 COG2935, COG2935, Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 636
KOG1193511 consensus Arginyl-tRNA-protein transferase [Posttr 100.0
PRK01305240 arginyl-tRNA-protein transferase; Provisional 100.0
COG2935253 Putative arginyl-tRNA:protein arginylyltransferase 100.0
PF04377128 ATE_C: Arginine-tRNA-protein transferase, C termin 100.0
PF0437680 ATE_N: Arginine-tRNA-protein transferase, N termin 99.93
PF13480142 Acetyltransf_6: Acetyltransferase (GNAT) domain 96.63
COG5653406 Protein involved in cellulose biosynthesis (CelD) 87.66
PF0058383 Acetyltransf_1: Acetyltransferase (GNAT) family; I 82.41
>KOG1193 consensus Arginyl-tRNA-protein transferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=6.8e-128  Score=1010.40  Aligned_cols=504  Identities=50%  Similarity=0.848  Sum_probs=413.4

Q ss_pred             CCCCCceEEEecCCCCCCCCCCCCCCCCceeecccccCCCHHHHHHHHHhcccccCCcccccCcccCCCCcceeeccCCC
Q 006656           17 SNRKGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASD   96 (636)
Q Consensus        17 ~~~~~~SiV~~~g~~~~~CgYc~~~~~~s~s~g~~a~~lt~~~Yq~LidrGwRRSG~~~YKP~~~~tCcp~ytIRl~a~~   96 (636)
                      |+.+++|||.++|+..+.||||++ .+.+.+||||++.||+.+||+||||||||||+|+|||+|.+||||+|||||++.+
T Consensus         3 ~~~g~~siv~~~gs~~s~cgyck~-~~~s~ShGm~a~~ltv~dYq~LiD~GWRRSG~YlYKp~~~~TCCp~YTIRl~~~~   81 (511)
T KOG1193|consen    3 GGGGSESIVDYLGSWKSTCGYCKS-ARESISHGMWAEHLTVNDYQRLIDRGWRRSGKYLYKPDMLKTCCPLYTIRLDPLE   81 (511)
T ss_pred             CCCCCHhHHHhcccchhccccccc-ccccccccceeeeeeHHHHHHHHhhccccccceeeccCCCCccCCCeeEeechhc
Confidence            456889999999999999999998 5789999999999999999999999999999999999999999999999999999


Q ss_pred             CccChhHHHHHHHhhhhh-cCcccccchhhhcccCCCCCCCCCCCCcccccccccCCccCchhHHHHHhhhhhhHHHHHH
Q 006656           97 FAPSKEQRRVSRRMQRFL-DGTVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQL  175 (636)
Q Consensus        97 FkpsKsQrrvlkr~~~~L-~g~~~~k~~~~~~~~d~~~~~~~~~s~~~~~~~~~~~~~~~~~~e~i~~~l~~~i~~~~~~  175 (636)
                      |+|||+||||+|||++|| +|+..++.. +++ .|....+            ..++.+..+..++.+..|+.++++++..
T Consensus        82 Fk~SKeqKrv~rr~~rfL~~gk~~~~p~-e~~-~~~~~~~------------~~a~~e~n~~~~~~~~~lSd~i~~~vq~  147 (511)
T KOG1193|consen   82 FKPSKEQKRVIRRMNRFLADGKRPVKPV-ESD-VDGTADD------------GAAKVEMNKKAEEGMKTLSDQIKKAVQS  147 (511)
T ss_pred             ccccHHHHHHHHHHHHHHhcCCCCCCcc-ccc-ccccccc------------ccchhhhcccccccccchhhHHHhhhhh
Confidence            999999999999999999 777665553 221 1110000            1111222223455666677777776542


Q ss_pred             HhhhcccccCCcCcchhhhhhhHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCChHHH
Q 006656          176 CIVRGQFLSGIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPSPKII  255 (636)
Q Consensus       176 ~~~~~~~~~~~q~p~~~~k~v~~~~~kk~~~g~~~l~y~sn~~f~i~~~~~~a~~~~k~~~q~r~~~~~~~~~~~~p~~i  255 (636)
                                     ++++++..++||++++|.   +|+++.++.              .         +....++++.|
T Consensus       148 ---------------~~v~el~sakrkkl~~g~---~~~~~~~~P--------------g---------~n~~rl~~e~~  186 (511)
T KOG1193|consen  148 ---------------ESVAELFSAKRKKLAEGT---LYTSTAPEP--------------G---------SNKNRLSKEEI  186 (511)
T ss_pred             ---------------hhHHHHHhhhcccccccc---eeeeeccCC--------------C---------CCccccChHHH
Confidence                           456677888899998875   677776532              0         12456788999


Q ss_pred             HHHHHHHHHhhhhcccccccccCCccchhhhhhhcccccccccccccccccccccccCCcCCCCCCCccccCCCcEEEE-
Q 006656          256 AAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRL-  334 (636)
Q Consensus       256 ~~kl~~~~~~~~~~~~~~~~~~~g~~n~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~l-  334 (636)
                      .+++...+.+.++...+..+.+.||+||...++.+.+.++..               +++.    ..+...+|++++++ 
T Consensus       187 ~e~~~~~~~k~~~~~~l~~~v~kgh~~~l~~~k~~~~~r~~~---------------sl~~----~~~~~~kh~l~~r~~  247 (511)
T KOG1193|consen  187 SEKKLSKMCKKGEQKNLDPKVAKGHINFLSSTKDASSQRTLE---------------SLID----EKSESNKHKLEVRLI  247 (511)
T ss_pred             hhHhhhhhhhhccccccchhhhccCccccccchhhhcccchh---------------hhhc----ccccchhhhhheeec
Confidence            999999999999998999999999999998777766654421               2211    12334567777664 


Q ss_pred             --ecCCCChHHHHHHHHHHHhHcCCCCCCCCHHHHHHHhhcCCCcccCCCCCCCCCCCCCcceEEEEeeCCeEEEEEEEe
Q 006656          335 --KRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVID  412 (636)
Q Consensus       335 --~~~~~~~E~~~LY~rYq~~~H~d~~~~~s~~~y~~FL~~spl~~~~~~~~~~~~~~~~Gs~h~~YrlDgkLIAVgViD  412 (636)
                        ..+.|++|+|+||+|||+.||+|+|..+++.+|+||||+|||..+.|.|   +|.|||||||||||+|||||||||||
T Consensus       248 hl~~s~F~~EsfeLYKkYQm~VH~D~p~~~~e~sfkRFLcdSPL~~e~~~g---~p~~gyGSfHqqY~lDgkLIAVgViD  324 (511)
T KOG1193|consen  248 HLKRSEFSPESFELYKKYQMKVHNDKPESITEKSFKRFLCDSPLGNEQPGG---GPLCGYGSFHQQYRLDGKLIAVGVID  324 (511)
T ss_pred             cccccccChHHHHHHHHHHHhhhcCCCCCcchhhHHHHhhcCCCccCCCCC---CCcccccchhheeeeCCeEEEEEEee
Confidence              4689999999999999999999999999999999999999999888776   79999999999999999999999999


Q ss_pred             cCCCcccceeeeeCCCcCcCCchhHHHHHHHHHHHHhcccCCCCceeEeeEeecCCCcccccccCCCCccccCCCCceee
Q 006656          413 ILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVP  492 (636)
Q Consensus       413 iLp~~vSSVY~fYDPdy~~~SLGt~saL~EI~~ar~l~~~~P~l~yyYlGYyIh~CpKM~YK~~f~P~elL~p~t~~W~~  492 (636)
                      |||.|||||||||||||+|||||+|||||||+|+++++++||+|+|||||||||+||||||||+|+|++||||+|++|+|
T Consensus       325 ILP~cvSSvYlfyDPDYSflSLG~ySALREI~~vq~~~a~~s~L~YYYmGyYIHSCpKMrYKa~yrPSeLLcp~ty~WvP  404 (511)
T KOG1193|consen  325 ILPKCVSSVYLFYDPDYSFLSLGKYSALREIALVQRLHAKCSNLQYYYMGYYIHSCPKMRYKAKYRPSELLCPETYKWVP  404 (511)
T ss_pred             cCCCccceEEEEECCchhhhccchhHHHHHHHHHHHHHhhCCCceEEEeeeEEecCcccccccccChHHhcCcccceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCceeeccccc-ccCCCCccccccccccccCCCCCCCCCCcccCcCCCcccCCCCCCCCCCCCCcccccc
Q 006656          493 YDIARPLLDRKPYVVLSDFAS-LQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEMLDPESESDDDEPDTETSCQ  571 (636)
Q Consensus       493 l~~~~~~LD~~kY~rls~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~d~~~~d~~~~~~~~~~~~~~~~~  571 (636)
                      |+.|+++||+++|++|+++.- ..+..+++++|.+++-                      ..++.     ..|       
T Consensus       405 ~e~~r~lLd~~~y~~~s~~~~~s~~~~s~~~sE~l~e~----------------------~~~e~-----~~~-------  450 (511)
T KOG1193|consen  405 FEVIRPLLDKKKYTRFSEEPYLSDSQTSEGASETLKEK----------------------VIDEH-----EDM-------  450 (511)
T ss_pred             hhhhhhhhccCcceecccccccCccccccCCccccchh----------------------hHHHH-----Hhh-------
Confidence            999999999999999998752 2222223333322210                      00000     001       


Q ss_pred             ccCCCCCCCCeeEEEeCCeeeechhhhhhhccchhhhHHHHHHHHHHHHhHHHHHHHHhhcc
Q 006656          572 TVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALG  633 (636)
Q Consensus       572 ~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~eYa~lVG~~~a~rml~~~~  633 (636)
                       ..+...+|.+|+|..+|+...|+++.++.++++++++|.+|.+|++|||++||+||||+++
T Consensus       451 -~~G~~~~i~~~li~~~~~~~~~k~~~~i~~~s~~~q~e~~i~~y~klVG~E~s~rm~y~~~  511 (511)
T KOG1193|consen  451 -LGGCTNKIPNILISLNGQSGRYKDLPQINFPSEPPQVEAMIVDYAKLVGAELSERMVYVLS  511 (511)
T ss_pred             -cCceeccchhhhhhhcccccccccchhccCcccchhHHHHHHHHHHHHhHHhhhheeEecC
Confidence             1123345899999999999999999999999999999999999999999999999999864



>PRK01305 arginyl-tRNA-protein transferase; Provisional Back     alignment and domain information
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein Back     alignment and domain information
>PF04376 ATE_N: Arginine-tRNA-protein transferase, N terminus; InterPro: IPR007471 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein Back     alignment and domain information
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain Back     alignment and domain information
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query636
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 56.4 bits (135), Expect = 3e-08
 Identities = 81/661 (12%), Positives = 189/661 (28%), Gaps = 203/661 (30%)

Query: 60  YQDLLD---RGWRRSGSFLYKPDMERTCCPSYTIRLRASDF-----APSKEQRRVSRRM- 110
           Y+D+L      +  +       DM ++        L   +      +        + R+ 
Sbjct: 18  YKDILSVFEDAFVDNFDCKDVQDMPKSI-------LSKEEIDHIIMSKDAVSG--TLRLF 68

Query: 111 -----------QRFLDGTVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEEN---- 155
                      Q+F++   +V + + + +  P  +   + S          +   N    
Sbjct: 69  WTLLSKQEEMVQKFVE---EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 156 ------NKEEEILQFLSG-QIDNAVQLCIVRGQFLSGIQLPKAS-VKKVSQAKR------ 201
                 ++ +  L+           +  ++ G   SG    K      V  + +      
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG----KTWVALDVCLSYKVQCKMD 181

Query: 202 --------------KLLVEGMENLLYT--------SNIAFQLAATLNRAQLAEKDVQQIR 239
                         + ++E ++ LLY         S+ +  +   ++  Q   + + + +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241

Query: 240 VFGQS--IEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVH 297
            +     +     + K   A   S  I L  T    +       +F SA     +  D H
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKI-LLTTRFKQV------TDFLSAATTTHISLDHH 294

Query: 298 IGTVSKESAKTCESKGGCLKNSSEH--PQAKR-HKLQIRL--KRSSFDPQEFELYRRYQI 352
             T++ +  K+   K   L    +    +    +  ++ +  +        ++ ++    
Sbjct: 295 SMTLTPDEVKSLLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 353 KVHNDKPDQVTETS--------YRRFLVDSPLVFVPPSGDDT-VPPCGFGSFHQQYLIDD 403
               DK   + E+S        YR+      L   P       +P               
Sbjct: 353 ----DKLTTIIESSLNVLEPAEYRKMFDR--LSVFP---PSAHIPT-------------- 389

Query: 404 RLVAVGVIDILPRCLSSKYLFW------DPDYAFLSLGKYSALQEISWVKENQTHCPTLQ 457
                 ++ ++          W      D       L KYS +++    KE+        
Sbjct: 390 -----ILLSLI----------WFDVIKSDVMVVVNKLHKYSLVEK--QPKEST------- 425

Query: 458 YYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ----WVPYDIARPLLD------------ 501
                 Y+    K+  + A H   ++    Y     +   D+  P LD            
Sbjct: 426 ISIPSIYLELKVKLENEYALH-RSIVD--HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 502 -----------RKPYVVLSDFASLQNE-SSPCISENVMGCQHDDIGQGDSNDVRM--DYD 547
                      R  ++   DF  L+ +      + N  G   + +       ++    Y 
Sbjct: 483 NIEHPERMTLFRMVFL---DFRFLEQKIRHDSTAWNASGSILNTL-----QQLKFYKPYI 534

Query: 548 YDDEMLDPESESD--DDEPDTETSCQTVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQ 605
            D++       +   D  P  E +   +  +  D+  I +  +   + +++  +    +Q
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENL--ICSKYTDLLRIALMAEDEAI-FEEAHKQ---VQ 588

Query: 606 R 606
           R
Sbjct: 589 R 589


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query636
3i9s_A183 Integron cassette protein; oyster POND, woods HOLE 90.29
1qsm_A152 HPA2 histone acetyltransferase; protein-acetyl coe 89.32
2cnt_A160 Modification of 30S ribosomal subunit protein S18; 84.91
3lod_A162 Putative acyl-COA N-acyltransferase; structural ge 83.62
2fe7_A166 Probable N-acetyltransferase; structural genomics, 82.64
3fyn_A176 Integron gene cassette protein HFX_CASS3; integron 82.57
1s3z_A165 Aminoglycoside 6'-N-acetyltransferase; GNAT, amino 82.56
1bo4_A168 Protein (serratia marcescens aminoglycoside-3-N- a 81.84
1cjw_A166 Protein (serotonin N-acetyltransferase); HET: COT; 81.51
2fia_A162 Acetyltransferase; structural genomics, PSI, prote 80.98
1yx0_A159 Hypothetical protein YSNE; NESG, GFT structral gen 80.5
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} Back     alignment and structure
Probab=90.29  E-value=2.6  Score=37.51  Aligned_cols=114  Identities=11%  Similarity=0.013  Sum_probs=72.1

Q ss_pred             EEEecCCCC--hHHHHHHHHHHHhHcCCCCCCCCHHHHHHHhhcCCCcccCCCCCCCCCCCCCcceEEEEeeCCeEEEEE
Q 006656          332 IRLKRSSFD--PQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVG  409 (636)
Q Consensus       332 v~l~~~~~~--~E~~~LY~rYq~~~H~d~~~~~s~~~y~~FL~~spl~~~~~~~~~~~~~~~~Gs~h~~YrlDgkLIAVg  409 (636)
                      ++|.+...+  ++-.+|+..+.......  ...+.+.+..++........            -+.+..-...||++||++
T Consensus        24 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------------~~~~~~v~~~~g~ivG~~   89 (183)
T 3i9s_A           24 VEIKRVDKHHCLDLVGIFIELERYYFGD--KAASEQDLANYLSHQVFSEH------------SGVKVIAAVEHDKVLGFA   89 (183)
T ss_dssp             CEEEECCGGGGGGGHHHHHHHHHHHHGG--GCCCHHHHHHHHHHTTTSTT------------CCCEEEEEEETTEEEEEE
T ss_pred             eEEEEcCHhHHHHHHHHHHHHHHHhccC--ccccHHHHHHHHHHhhhccC------------CCceEEEEEECCEEEEEE
Confidence            444444432  34466776654433322  24678899998876533210            012344455799999999


Q ss_pred             EEecCCC-----cccce-eeeeCCCcCcCCchhHHHHHHHHHHHHhcccCCCCceeEeeEe
Q 006656          410 VIDILPR-----CLSSK-YLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYY  464 (636)
Q Consensus       410 ViDiLp~-----~vSSV-Y~fYDPdy~~~SLGt~saL~EI~~ar~l~~~~P~l~yyYlGYy  464 (636)
                      .+.....     ..--+ .++-+|+|....+|+..+-.-+++|++.+     +..+++.-.
T Consensus        90 ~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g-----~~~i~l~~~  145 (183)
T 3i9s_A           90 TYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHN-----CQRLDWTAE  145 (183)
T ss_dssp             EEEEESCCGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTT-----EEEEEEEEE
T ss_pred             EEEEecCCCCCCCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHHcC-----CCEEEEEEe
Confidence            8875532     12122 45679999999999998888888998884     676766543



>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A Back     alignment and structure
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* Back     alignment and structure
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 Back     alignment and structure
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} Back     alignment and structure
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* Back     alignment and structure
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Back     alignment and structure
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A Back     alignment and structure
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 Back     alignment and structure
>1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query636
d1lrza3182 Methicillin resistance protein FemA {Staphylococcu 93.42
d1qsma_150 Histone acetyltransferase HPA2 {Baker's yeast (Sac 89.4
d1y7ra1133 Hypothetical protein SA2161 {Staphylococcus aureus 88.68
d1ne9a2171 Peptidyltransferase FemX {Weissella viridescens [T 87.23
d2jdca1145 Probable acetyltransferase YitI {Bacillus lichenif 85.85
d1z4ea1150 Transcriptional regulator BH1968 {Bacillus halodur 81.28
d1ghea_170 Tabtoxin resistance protein {Pseudomonas syringae 80.54
>d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: FemXAB nonribosomal peptidyltransferases
domain: Methicillin resistance protein FemA
species: Staphylococcus aureus [TaxId: 1280]
Probab=93.42  E-value=0.1  Score=46.57  Aligned_cols=136  Identities=9%  Similarity=0.028  Sum_probs=85.2

Q ss_pred             CcEEEEecCCCChHHHHHHHHHHHhHcCCCCCCCCHHHHHHHhhcCCCcccCCCCCCCCCCCCCcceEEEEeeCCeEEEE
Q 006656          329 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAV  408 (636)
Q Consensus       329 ~l~v~l~~~~~~~E~~~LY~rYq~~~H~d~~~~~s~~~y~~FL~~spl~~~~~~~~~~~~~~~~Gs~h~~YrlDgkLIAV  408 (636)
                      .++|+.....--++-++||..-. .+|+-.  ..+.+-|..++..-+=              .  ..-...+.+|++||.
T Consensus        25 gv~i~~~~~~~l~~f~~l~~~~~-~r~g~~--~~~~~~~~~l~~~~~~--------------~--~~l~~a~~~~~~ia~   85 (182)
T d1lrza3          25 GVKVRFLSEEELPIFRSFMEDTS-ESKAFA--DRDDKFYYNRLKYYKD--------------R--VLVPLAYINELPISA   85 (182)
T ss_dssp             SCEEEECCGGGHHHHHHHC---------------CHHHHHHHHHHHGG--------------G--EECEEEEEEEEEEEE
T ss_pred             CCEEEEcCHHHHHHHHHHHHHHH-HhcCCC--CCCHHHHHHHHHhccc--------------c--EeeeeeecCCccEEE
Confidence            46666543222234455555422 334322  3456666666543210              0  233445679999999


Q ss_pred             EEEecCCCcccceeeeeCCCcCcCCchhHHHHHHHHHHHHhcccCCCCceeEeeEeecC--CC------cccccccCCCC
Q 006656          409 GVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHS--CR------KMRYKAAYHPS  480 (636)
Q Consensus       409 gViDiLp~~vSSVY~fYDPdy~~~SLGt~saL~EI~~ar~l~~~~P~l~yyYlGYyIh~--Cp------KM~YK~~f~P~  480 (636)
                      +++=+.++.+--.|.-.||++..++.+.+..-.-|++|++.+     +++|-||= |..  .+      =++||..|.+.
T Consensus        86 ~l~~~~~~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G-----~~~~D~gG-~~~~~~~~~~~~Gl~~FK~~fg~~  159 (182)
T d1lrza3          86 GFFFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHG-----IDRYNFYG-VSGKFTEDAEDAGVVKFKKGYNAE  159 (182)
T ss_dssp             EEEEECSSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTT-----CCEEEEEE-CCSCCSTTCTTHHHHHHHHTTTCE
T ss_pred             EEEEeechhheeeeceeccchhhcCchHHHHHHHHHHHHHcC-----CcEEEecC-cCCCCCCCcccchHHHHHHhcCCc
Confidence            999888888887777899999999999999989999999995     99999964 322  11      24899999887


Q ss_pred             ccccCCCCcee
Q 006656          481 ELLCPLRYQWV  491 (636)
Q Consensus       481 elL~p~t~~W~  491 (636)
                      .+-=+  +.|.
T Consensus       160 ~v~~~--g~~~  168 (182)
T d1lrza3         160 IIEYV--GDFI  168 (182)
T ss_dssp             EEEEC--CCEE
T ss_pred             eeeec--ceEe
Confidence            54222  3575



>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} Back     information, alignment and structure
>d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure