Citrus Sinensis ID: 006656
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 636 | ||||||
| 225448390 | 640 | PREDICTED: arginyl-tRNA--protein transfe | 0.952 | 0.946 | 0.657 | 0.0 | |
| 255571911 | 629 | Arginyl-tRNA--protein transferase, putat | 0.946 | 0.957 | 0.658 | 0.0 | |
| 356568461 | 612 | PREDICTED: arginyl-tRNA--protein transfe | 0.957 | 0.995 | 0.638 | 0.0 | |
| 224112529 | 596 | predicted protein [Populus trichocarpa] | 0.893 | 0.953 | 0.640 | 0.0 | |
| 356539953 | 619 | PREDICTED: arginyl-tRNA--protein transfe | 0.965 | 0.991 | 0.633 | 0.0 | |
| 357461181 | 626 | Metallocarboxypeptidase inhibitor [Medic | 0.962 | 0.977 | 0.615 | 0.0 | |
| 224098539 | 537 | predicted protein [Populus trichocarpa] | 0.834 | 0.988 | 0.657 | 0.0 | |
| 297833912 | 602 | hypothetical protein ARALYDRAFT_478464 [ | 0.929 | 0.981 | 0.542 | 0.0 | |
| 449441312 | 636 | PREDICTED: arginyl-tRNA--protein transfe | 0.979 | 0.979 | 0.562 | 0.0 | |
| 449526968 | 636 | PREDICTED: arginyl-tRNA--protein transfe | 0.979 | 0.979 | 0.560 | 0.0 |
| >gi|225448390|ref|XP_002271416.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/624 (65%), Positives = 486/624 (77%), Gaps = 18/624 (2%)
Query: 22 ETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME 81
E+VV D G RS+CGYC+S RTSI+HGLWA+S+TVDDYQDLLDRGWRRSGSFLYKP+ME
Sbjct: 23 ESVVVDVGRRRSTCGYCRSGARTSISHGLWAHSITVDDYQDLLDRGWRRSGSFLYKPEME 82
Query: 82 RTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTSNC----- 136
RTCCPSYTIRLRA DF PSKEQ RVS+RMQRF DGT+ V+K+ ++ P TS
Sbjct: 83 RTCCPSYTIRLRADDFVPSKEQLRVSKRMQRFQDGTLSVKKQD-KINDGPKTSKSSGSSI 141
Query: 137 -NKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKK 195
++VS S +L+ +EE NK E + +LS QIDNAV C G+FL IQLPKASVK
Sbjct: 142 HHEVSGSAAKGTLAGKDEEKNKVEAFMHYLSDQIDNAVCACTESGEFLCDIQLPKASVKM 201
Query: 196 VSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPS---- 251
V AKRKL VEG E+LLY+SNI+FQ+AATL RAQ AEKDV ++ + E+ S
Sbjct: 202 VLPAKRKLQVEGSEDLLYSSNISFQIAATLRRAQSAEKDVPHSKLSRHNAEEDVSSIAFL 261
Query: 252 PKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKESAKTCES 311
PK IA KLASSL +A+ SG+ IRACNGH+NFYSA K L E + I +KES S
Sbjct: 262 PKTIAEKLASSLNHMAKVSGMLIRACNGHINFYSARKGNFLSEGIQIVNGAKESPTGSGS 321
Query: 312 KGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFL 371
+GGCLK SSE PQ KR KL+IRLKRSSFDP+EF LYRRYQIKVHND P+ V E+SYRRFL
Sbjct: 322 EGGCLKKSSECPQGKRRKLEIRLKRSSFDPEEFALYRRYQIKVHNDTPEHVMESSYRRFL 381
Query: 372 VDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAF 431
VD+PLVFVPP+GDDTVPPCGFGSFHQQY+ID RLVAVGVIDILPRCLSSKYLFWDPD AF
Sbjct: 382 VDTPLVFVPPTGDDTVPPCGFGSFHQQYVIDGRLVAVGVIDILPRCLSSKYLFWDPDLAF 441
Query: 432 LSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 491
LSLGKYSALQEI W+KENQ HCP+L+YYYLGYYIHSC KMRYKAAY PSELLCPLRYQWV
Sbjct: 442 LSLGKYSALQEIGWIKENQAHCPSLEYYYLGYYIHSCSKMRYKAAYRPSELLCPLRYQWV 501
Query: 492 PYDIARPLLDRKPYVVLSDFASLQN-ESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDD 550
P+DIARPLLDR+PYVVLSDFA LQN ES+P + EN+M QH+ + + D+ND+ D+
Sbjct: 502 PFDIARPLLDRQPYVVLSDFAVLQNGESTPHVPENLMEMQHNGLNEEDANDID-----DE 556
Query: 551 EMLDPESESDDDEPDTETSCQT-VGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSL 609
EM D + + DDE D+E + T V +EDGD+SN++I + + VR+KD+Q FGP +R L
Sbjct: 557 EMDDADFVNSDDESDSEANGPTSVEIEDGDVSNVLIGLKRSCVRFKDLQHAFGPSERAYL 616
Query: 610 ESQLRKYMKVVGAELSERMVYALG 633
E+QLR+YM+ VGAE++ RMVY+LG
Sbjct: 617 ETQLRRYMRAVGAEVAGRMVYSLG 640
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255571911|ref|XP_002526898.1| Arginyl-tRNA--protein transferase, putative [Ricinus communis] gi|223533797|gb|EEF35529.1| Arginyl-tRNA--protein transferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356568461|ref|XP_003552429.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224112529|ref|XP_002316221.1| predicted protein [Populus trichocarpa] gi|222865261|gb|EEF02392.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356539953|ref|XP_003538457.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357461181|ref|XP_003600872.1| Metallocarboxypeptidase inhibitor [Medicago truncatula] gi|355489920|gb|AES71123.1| Metallocarboxypeptidase inhibitor [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224098539|ref|XP_002311211.1| predicted protein [Populus trichocarpa] gi|222851031|gb|EEE88578.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297833912|ref|XP_002884838.1| hypothetical protein ARALYDRAFT_478464 [Arabidopsis lyrata subsp. lyrata] gi|297330678|gb|EFH61097.1| hypothetical protein ARALYDRAFT_478464 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|449441312|ref|XP_004138426.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449526968|ref|XP_004170485.1| PREDICTED: arginyl-tRNA--protein transferase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 636 | ||||||
| TAIR|locus:2166454 | 632 | ATE1 "arginine-tRNA protein tr | 0.941 | 0.947 | 0.523 | 2e-166 | |
| TAIR|locus:2074718 | 605 | ATE2 "arginine-tRNA protein tr | 0.691 | 0.727 | 0.537 | 6.1e-126 | |
| UNIPROTKB|F5GXE4 | 511 | ATE1 "Arginyl-tRNA--protein tr | 0.281 | 0.350 | 0.510 | 6.4e-79 | |
| UNIPROTKB|H0Y5C2 | 515 | ATE1 "Arginyl-tRNA--protein tr | 0.281 | 0.347 | 0.494 | 1.7e-78 | |
| UNIPROTKB|O95260 | 518 | ATE1 "Arginyl-tRNA--protein tr | 0.281 | 0.345 | 0.494 | 1.7e-78 | |
| UNIPROTKB|E1BI60 | 518 | ATE1 "Arginyl-tRNA--protein tr | 0.281 | 0.345 | 0.510 | 3.5e-78 | |
| MGI|MGI:1333870 | 516 | Ate1 "arginyltransferase 1" [M | 0.283 | 0.348 | 0.502 | 2.4e-77 | |
| UNIPROTKB|E1BVG9 | 527 | ATE1 "Arginyl-tRNA--protein tr | 0.281 | 0.339 | 0.510 | 2.4e-77 | |
| UNIPROTKB|F1SEH8 | 516 | ATE1 "Arginyl-tRNA--protein tr | 0.281 | 0.346 | 0.505 | 3e-77 | |
| UNIPROTKB|E2RS45 | 522 | ATE1 "Arginyl-tRNA--protein tr | 0.281 | 0.342 | 0.510 | 4.9e-77 |
| TAIR|locus:2166454 ATE1 "arginine-tRNA protein transferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1619 (575.0 bits), Expect = 2.0e-166, P = 2.0e-166
Identities = 328/626 (52%), Positives = 424/626 (67%)
Query: 22 ETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME 81
E+V+ D G +S+CGYCKS R+SI+HGL A ++TV DYQ L+DRGWRRSG++LYK +M+
Sbjct: 18 ESVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALIDRGWRRSGTYLYKHEMD 77
Query: 82 RTCCPSYTIRLRASDFAPSKEQRRVSRRMQRFLDGTVDVEKKSVELIKDPSTXXXXXXXX 141
+TCCP YTIRL+ASDF P+KEQ+RVSRR++RFLDG +DV+ + +
Sbjct: 78 KTCCPPYTIRLKASDFVPTKEQQRVSRRLERFLDGKLDVQPR-----EQRGASSSGDVSD 132
Query: 142 XXXXXXXXXXXXXXXXXXXILQFLSGQIDNAVQLCIVRGQFLSGIQLPKASVKKVSQAKR 201
++ LS ID AVQLCI G+F S +Q+PKASVKKV A+R
Sbjct: 133 TRRKTLGAAKSEENKKVEAVMDDLSKNIDQAVQLCIRSGEFPSNMQIPKASVKKVFCARR 192
Query: 202 KLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFG-QSIEDTGPSPKIIAAKLA 260
K L EG E +LYTSNIAF +AA + R Q +EK+ G S E SP+ I+ L
Sbjct: 193 KKLAEGTEQILYTSNIAFPIAAAIKRIQTSEKE-------GINSAEGNRLSPETISEMLL 245
Query: 261 SSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDV-HIGTVSKESAKTCESKGGCLKNS 319
S++ ++ ET +SI+ C GH+NF S+ K + D DV G +S+ + S+ K
Sbjct: 246 SAMHKVGETPDVSIKVCKGHINFLSSAKDSFSDRDVVPNGNISRGANSLDGSETLHAKKD 305
Query: 320 SEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFV 379
SE+ QA++ KL+I LKRSSFDP+E ELY+RYQ+KVHNDKP V E+SYRRFLVDSPL+ V
Sbjct: 306 SENHQARKRKLEIHLKRSSFDPEEHELYKRYQLKVHNDKPGHVVESSYRRFLVDSPLIDV 365
Query: 380 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 439
PSGD+ VPPCGFGSFHQQY ID RL+AVGV+DILP+CLSS YLFWDPDYAFLSLGKYSA
Sbjct: 366 QPSGDEKVPPCGFGSFHQQYRIDGRLIAVGVVDILPKCLSSVYLFWDPDYAFLSLGKYSA 425
Query: 440 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPL 499
+QEI+WV ENQ CP+LQYYYLGYYIHSC KMRYKAAY PSELLCPLR+QWVP+++ARP+
Sbjct: 426 IQEINWVIENQARCPSLQYYYLGYYIHSCSKMRYKAAYRPSELLCPLRFQWVPFEVARPM 485
Query: 500 LDRKPYVVLSDFASLQNESSPCI--SENVM---GCQHDDIGQGDSNDVRM-------DYD 547
LD+KPYV+LSD A N+ S SE ++ +H+D+ QG++ND M D D
Sbjct: 486 LDKKPYVILSDIAISHNQCSLLAGASETLVEPAASEHEDMEQGETNDNFMGCSDEDEDED 545
Query: 548 YXXXXXXXXXXXXXXXXXXXXSCQT-VGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQR 606
++ G +D DI+NI+I G++ RYK+++++ P+ R
Sbjct: 546 EDDDDDDDDDEEMYETESEDSHIESDPGSKDNDINNILIGLYGSQYRYKEMRQIITPVGR 605
Query: 607 RSLESQLRKYMKVVGAELSERMVYAL 632
+ LE L+ Y KVVGAELSERMVY +
Sbjct: 606 KQLEPMLQSYRKVVGAELSERMVYEI 631
|
|
| TAIR|locus:2074718 ATE2 "arginine-tRNA protein transferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F5GXE4 ATE1 "Arginyl-tRNA--protein transferase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H0Y5C2 ATE1 "Arginyl-tRNA--protein transferase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O95260 ATE1 "Arginyl-tRNA--protein transferase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BI60 ATE1 "Arginyl-tRNA--protein transferase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1333870 Ate1 "arginyltransferase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BVG9 ATE1 "Arginyl-tRNA--protein transferase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SEH8 ATE1 "Arginyl-tRNA--protein transferase 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RS45 ATE1 "Arginyl-tRNA--protein transferase 1" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00101842 | hypothetical protein (596 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 636 | |||
| pfam04377 | 128 | pfam04377, ATE_C, Arginine-tRNA-protein transferas | 1e-55 | |
| COG2935 | 253 | COG2935, COG2935, Putative arginyl-tRNA:protein ar | 7e-36 | |
| PRK01305 | 240 | PRK01305, PRK01305, arginyl-tRNA-protein transfera | 1e-35 | |
| pfam04376 | 78 | pfam04376, ATE_N, Arginine-tRNA-protein transferas | 9e-27 | |
| PRK01305 | 240 | PRK01305, PRK01305, arginyl-tRNA-protein transfera | 1e-10 | |
| COG2935 | 253 | COG2935, COG2935, Putative arginyl-tRNA:protein ar | 8e-08 |
| >gnl|CDD|218050 pfam04377, ATE_C, Arginine-tRNA-protein transferase, C terminus | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 1e-55
Identities = 59/149 (39%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 341 PQEFELYRRYQIKVHNDKP-DQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQY 399
+ + LY RYQ H D Y FL DSPL G+ +Y
Sbjct: 1 EEHYALYERYQRARHADGGMYPPDREQYASFLEDSPL----------------GTRFLEY 44
Query: 400 LIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYY 459
+D +L+AV V DILP LS+ Y F+DPDY+ SLG YS L +I KE L Y
Sbjct: 45 RLDGKLIAVAVTDILPDGLSAVYTFYDPDYSKRSLGTYSILWQIELAKELG-----LPYV 99
Query: 460 YLGYYIHSCRKMRYKAAYHPSELLCPLRY 488
YLGY+I C KM YKA + P E+L P +
Sbjct: 100 YLGYWIKGCPKMNYKARFRPLEILDPGGW 128
|
This family represents the C terminal region of the enzyme arginine-tRNA-protein transferase (EC 2.3.2.8), which catalyzes the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N-end rule pathway of protein degradation by conjugating a destabilising amino acid to the amino terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N terminal cysteine is sometimes modified. Length = 128 |
| >gnl|CDD|225486 COG2935, COG2935, Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|234939 PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|202988 pfam04376, ATE_N, Arginine-tRNA-protein transferase, N terminus | Back alignment and domain information |
|---|
| >gnl|CDD|234939 PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|225486 COG2935, COG2935, Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 636 | |||
| KOG1193 | 511 | consensus Arginyl-tRNA-protein transferase [Posttr | 100.0 | |
| PRK01305 | 240 | arginyl-tRNA-protein transferase; Provisional | 100.0 | |
| COG2935 | 253 | Putative arginyl-tRNA:protein arginylyltransferase | 100.0 | |
| PF04377 | 128 | ATE_C: Arginine-tRNA-protein transferase, C termin | 100.0 | |
| PF04376 | 80 | ATE_N: Arginine-tRNA-protein transferase, N termin | 99.93 | |
| PF13480 | 142 | Acetyltransf_6: Acetyltransferase (GNAT) domain | 96.63 | |
| COG5653 | 406 | Protein involved in cellulose biosynthesis (CelD) | 87.66 | |
| PF00583 | 83 | Acetyltransf_1: Acetyltransferase (GNAT) family; I | 82.41 |
| >KOG1193 consensus Arginyl-tRNA-protein transferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-128 Score=1010.40 Aligned_cols=504 Identities=50% Similarity=0.848 Sum_probs=413.4
Q ss_pred CCCCCceEEEecCCCCCCCCCCCCCCCCceeecccccCCCHHHHHHHHHhcccccCCcccccCcccCCCCcceeeccCCC
Q 006656 17 SNRKGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASD 96 (636)
Q Consensus 17 ~~~~~~SiV~~~g~~~~~CgYc~~~~~~s~s~g~~a~~lt~~~Yq~LidrGwRRSG~~~YKP~~~~tCcp~ytIRl~a~~ 96 (636)
|+.+++|||.++|+..+.||||++ .+.+.+||||++.||+.+||+||||||||||+|+|||+|.+||||+|||||++.+
T Consensus 3 ~~~g~~siv~~~gs~~s~cgyck~-~~~s~ShGm~a~~ltv~dYq~LiD~GWRRSG~YlYKp~~~~TCCp~YTIRl~~~~ 81 (511)
T KOG1193|consen 3 GGGGSESIVDYLGSWKSTCGYCKS-ARESISHGMWAEHLTVNDYQRLIDRGWRRSGKYLYKPDMLKTCCPLYTIRLDPLE 81 (511)
T ss_pred CCCCCHhHHHhcccchhccccccc-ccccccccceeeeeeHHHHHHHHhhccccccceeeccCCCCccCCCeeEeechhc
Confidence 456889999999999999999998 5789999999999999999999999999999999999999999999999999999
Q ss_pred CccChhHHHHHHHhhhhh-cCcccccchhhhcccCCCCCCCCCCCCcccccccccCCccCchhHHHHHhhhhhhHHHHHH
Q 006656 97 FAPSKEQRRVSRRMQRFL-DGTVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQL 175 (636)
Q Consensus 97 FkpsKsQrrvlkr~~~~L-~g~~~~k~~~~~~~~d~~~~~~~~~s~~~~~~~~~~~~~~~~~~e~i~~~l~~~i~~~~~~ 175 (636)
|+|||+||||+|||++|| +|+..++.. +++ .|....+ ..++.+..+..++.+..|+.++++++..
T Consensus 82 Fk~SKeqKrv~rr~~rfL~~gk~~~~p~-e~~-~~~~~~~------------~~a~~e~n~~~~~~~~~lSd~i~~~vq~ 147 (511)
T KOG1193|consen 82 FKPSKEQKRVIRRMNRFLADGKRPVKPV-ESD-VDGTADD------------GAAKVEMNKKAEEGMKTLSDQIKKAVQS 147 (511)
T ss_pred ccccHHHHHHHHHHHHHHhcCCCCCCcc-ccc-ccccccc------------ccchhhhcccccccccchhhHHHhhhhh
Confidence 999999999999999999 777665553 221 1110000 1111222223455666677777776542
Q ss_pred HhhhcccccCCcCcchhhhhhhHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCChHHH
Q 006656 176 CIVRGQFLSGIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQIRVFGQSIEDTGPSPKII 255 (636)
Q Consensus 176 ~~~~~~~~~~~q~p~~~~k~v~~~~~kk~~~g~~~l~y~sn~~f~i~~~~~~a~~~~k~~~q~r~~~~~~~~~~~~p~~i 255 (636)
++++++..++||++++|. +|+++.++. . +....++++.|
T Consensus 148 ---------------~~v~el~sakrkkl~~g~---~~~~~~~~P--------------g---------~n~~rl~~e~~ 186 (511)
T KOG1193|consen 148 ---------------ESVAELFSAKRKKLAEGT---LYTSTAPEP--------------G---------SNKNRLSKEEI 186 (511)
T ss_pred ---------------hhHHHHHhhhcccccccc---eeeeeccCC--------------C---------CCccccChHHH
Confidence 456677888899998875 677776532 0 12456788999
Q ss_pred HHHHHHHHHhhhhcccccccccCCccchhhhhhhcccccccccccccccccccccccCCcCCCCCCCccccCCCcEEEE-
Q 006656 256 AAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVHIGTVSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRL- 334 (636)
Q Consensus 256 ~~kl~~~~~~~~~~~~~~~~~~~g~~n~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~l- 334 (636)
.+++...+.+.++...+..+.+.||+||...++.+.+.++.. +++. ..+...+|++++++
T Consensus 187 ~e~~~~~~~k~~~~~~l~~~v~kgh~~~l~~~k~~~~~r~~~---------------sl~~----~~~~~~kh~l~~r~~ 247 (511)
T KOG1193|consen 187 SEKKLSKMCKKGEQKNLDPKVAKGHINFLSSTKDASSQRTLE---------------SLID----EKSESNKHKLEVRLI 247 (511)
T ss_pred hhHhhhhhhhhccccccchhhhccCccccccchhhhcccchh---------------hhhc----ccccchhhhhheeec
Confidence 999999999999998999999999999998777766654421 2211 12334567777664
Q ss_pred --ecCCCChHHHHHHHHHHHhHcCCCCCCCCHHHHHHHhhcCCCcccCCCCCCCCCCCCCcceEEEEeeCCeEEEEEEEe
Q 006656 335 --KRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVID 412 (636)
Q Consensus 335 --~~~~~~~E~~~LY~rYq~~~H~d~~~~~s~~~y~~FL~~spl~~~~~~~~~~~~~~~~Gs~h~~YrlDgkLIAVgViD 412 (636)
..+.|++|+|+||+|||+.||+|+|..+++.+|+||||+|||..+.|.| +|.|||||||||||+|||||||||||
T Consensus 248 hl~~s~F~~EsfeLYKkYQm~VH~D~p~~~~e~sfkRFLcdSPL~~e~~~g---~p~~gyGSfHqqY~lDgkLIAVgViD 324 (511)
T KOG1193|consen 248 HLKRSEFSPESFELYKKYQMKVHNDKPESITEKSFKRFLCDSPLGNEQPGG---GPLCGYGSFHQQYRLDGKLIAVGVID 324 (511)
T ss_pred cccccccChHHHHHHHHHHHhhhcCCCCCcchhhHHHHhhcCCCccCCCCC---CCcccccchhheeeeCCeEEEEEEee
Confidence 4689999999999999999999999999999999999999999888776 79999999999999999999999999
Q ss_pred cCCCcccceeeeeCCCcCcCCchhHHHHHHHHHHHHhcccCCCCceeEeeEeecCCCcccccccCCCCccccCCCCceee
Q 006656 413 ILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVP 492 (636)
Q Consensus 413 iLp~~vSSVY~fYDPdy~~~SLGt~saL~EI~~ar~l~~~~P~l~yyYlGYyIh~CpKM~YK~~f~P~elL~p~t~~W~~ 492 (636)
|||.|||||||||||||+|||||+|||||||+|+++++++||+|+|||||||||+||||||||+|+|++||||+|++|+|
T Consensus 325 ILP~cvSSvYlfyDPDYSflSLG~ySALREI~~vq~~~a~~s~L~YYYmGyYIHSCpKMrYKa~yrPSeLLcp~ty~WvP 404 (511)
T KOG1193|consen 325 ILPKCVSSVYLFYDPDYSFLSLGKYSALREIALVQRLHAKCSNLQYYYMGYYIHSCPKMRYKAKYRPSELLCPETYKWVP 404 (511)
T ss_pred cCCCccceEEEEECCchhhhccchhHHHHHHHHHHHHHhhCCCceEEEeeeEEecCcccccccccChHHhcCcccceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCceeeccccc-ccCCCCccccccccccccCCCCCCCCCCcccCcCCCcccCCCCCCCCCCCCCcccccc
Q 006656 493 YDIARPLLDRKPYVVLSDFAS-LQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEMLDPESESDDDEPDTETSCQ 571 (636)
Q Consensus 493 l~~~~~~LD~~kY~rls~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~d~~~~d~~~~~~~~~~~~~~~~~ 571 (636)
|+.|+++||+++|++|+++.- ..+..+++++|.+++- ..++. ..|
T Consensus 405 ~e~~r~lLd~~~y~~~s~~~~~s~~~~s~~~sE~l~e~----------------------~~~e~-----~~~------- 450 (511)
T KOG1193|consen 405 FEVIRPLLDKKKYTRFSEEPYLSDSQTSEGASETLKEK----------------------VIDEH-----EDM------- 450 (511)
T ss_pred hhhhhhhhccCcceecccccccCccccccCCccccchh----------------------hHHHH-----Hhh-------
Confidence 999999999999999998752 2222223333322210 00000 001
Q ss_pred ccCCCCCCCCeeEEEeCCeeeechhhhhhhccchhhhHHHHHHHHHHHHhHHHHHHHHhhcc
Q 006656 572 TVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYALG 633 (636)
Q Consensus 572 ~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~eYa~lVG~~~a~rml~~~~ 633 (636)
..+...+|.+|+|..+|+...|+++.++.++++++++|.+|.+|++|||++||+||||+++
T Consensus 451 -~~G~~~~i~~~li~~~~~~~~~k~~~~i~~~s~~~q~e~~i~~y~klVG~E~s~rm~y~~~ 511 (511)
T KOG1193|consen 451 -LGGCTNKIPNILISLNGQSGRYKDLPQINFPSEPPQVEAMIVDYAKLVGAELSERMVYVLS 511 (511)
T ss_pred -cCceeccchhhhhhhcccccccccchhccCcccchhHHHHHHHHHHHHhHHhhhheeEecC
Confidence 1123345899999999999999999999999999999999999999999999999999864
|
|
| >PRK01305 arginyl-tRNA-protein transferase; Provisional | Back alignment and domain information |
|---|
| >COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein | Back alignment and domain information |
|---|
| >PF04376 ATE_N: Arginine-tRNA-protein transferase, N terminus; InterPro: IPR007471 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein | Back alignment and domain information |
|---|
| >PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
| >COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 636 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 3e-08
Identities = 81/661 (12%), Positives = 189/661 (28%), Gaps = 203/661 (30%)
Query: 60 YQDLLD---RGWRRSGSFLYKPDMERTCCPSYTIRLRASDF-----APSKEQRRVSRRM- 110
Y+D+L + + DM ++ L + + + R+
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSI-------LSKEEIDHIIMSKDAVSG--TLRLF 68
Query: 111 -----------QRFLDGTVDVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEEN---- 155
Q+F++ +V + + + + P + + S + N
Sbjct: 69 WTLLSKQEEMVQKFVE---EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 156 ------NKEEEILQFLSG-QIDNAVQLCIVRGQFLSGIQLPKAS-VKKVSQAKR------ 201
++ + L+ + ++ G SG K V + +
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG----KTWVALDVCLSYKVQCKMD 181
Query: 202 --------------KLLVEGMENLLYT--------SNIAFQLAATLNRAQLAEKDVQQIR 239
+ ++E ++ LLY S+ + + ++ Q + + + +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241
Query: 240 VFGQS--IEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDVH 297
+ + + K A S I L T + +F SA + D H
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKI-LLTTRFKQV------TDFLSAATTTHISLDHH 294
Query: 298 IGTVSKESAKTCESKGGCLKNSSEH--PQAKR-HKLQIRL--KRSSFDPQEFELYRRYQI 352
T++ + K+ K L + + + ++ + + ++ ++
Sbjct: 295 SMTLTPDEVKSLLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352
Query: 353 KVHNDKPDQVTETS--------YRRFLVDSPLVFVPPSGDDT-VPPCGFGSFHQQYLIDD 403
DK + E+S YR+ L P +P
Sbjct: 353 ----DKLTTIIESSLNVLEPAEYRKMFDR--LSVFP---PSAHIPT-------------- 389
Query: 404 RLVAVGVIDILPRCLSSKYLFW------DPDYAFLSLGKYSALQEISWVKENQTHCPTLQ 457
++ ++ W D L KYS +++ KE+
Sbjct: 390 -----ILLSLI----------WFDVIKSDVMVVVNKLHKYSLVEK--QPKEST------- 425
Query: 458 YYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ----WVPYDIARPLLD------------ 501
Y+ K+ + A H ++ Y + D+ P LD
Sbjct: 426 ISIPSIYLELKVKLENEYALH-RSIVD--HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
Query: 502 -----------RKPYVVLSDFASLQNE-SSPCISENVMGCQHDDIGQGDSNDVRM--DYD 547
R ++ DF L+ + + N G + + ++ Y
Sbjct: 483 NIEHPERMTLFRMVFL---DFRFLEQKIRHDSTAWNASGSILNTL-----QQLKFYKPYI 534
Query: 548 YDDEMLDPESESD--DDEPDTETSCQTVGVEDGDISNIVIRGQGTRVRYKDIQRVFGPIQ 605
D++ + D P E + + + D+ I + + + +++ + +Q
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENL--ICSKYTDLLRIALMAEDEAI-FEEAHKQ---VQ 588
Query: 606 R 606
R
Sbjct: 589 R 589
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 636 | |||
| 3i9s_A | 183 | Integron cassette protein; oyster POND, woods HOLE | 90.29 | |
| 1qsm_A | 152 | HPA2 histone acetyltransferase; protein-acetyl coe | 89.32 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 84.91 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 83.62 | |
| 2fe7_A | 166 | Probable N-acetyltransferase; structural genomics, | 82.64 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 82.57 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 82.56 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 81.84 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 81.51 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 80.98 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 80.5 |
| >3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=90.29 E-value=2.6 Score=37.51 Aligned_cols=114 Identities=11% Similarity=0.013 Sum_probs=72.1
Q ss_pred EEEecCCCC--hHHHHHHHHHHHhHcCCCCCCCCHHHHHHHhhcCCCcccCCCCCCCCCCCCCcceEEEEeeCCeEEEEE
Q 006656 332 IRLKRSSFD--PQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVG 409 (636)
Q Consensus 332 v~l~~~~~~--~E~~~LY~rYq~~~H~d~~~~~s~~~y~~FL~~spl~~~~~~~~~~~~~~~~Gs~h~~YrlDgkLIAVg 409 (636)
++|.+...+ ++-.+|+..+....... ...+.+.+..++........ -+.+..-...||++||++
T Consensus 24 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------------~~~~~~v~~~~g~ivG~~ 89 (183)
T 3i9s_A 24 VEIKRVDKHHCLDLVGIFIELERYYFGD--KAASEQDLANYLSHQVFSEH------------SGVKVIAAVEHDKVLGFA 89 (183)
T ss_dssp CEEEECCGGGGGGGHHHHHHHHHHHHGG--GCCCHHHHHHHHHHTTTSTT------------CCCEEEEEEETTEEEEEE
T ss_pred eEEEEcCHhHHHHHHHHHHHHHHHhccC--ccccHHHHHHHHHHhhhccC------------CCceEEEEEECCEEEEEE
Confidence 444444432 34466776654433322 24678899998876533210 012344455799999999
Q ss_pred EEecCCC-----cccce-eeeeCCCcCcCCchhHHHHHHHHHHHHhcccCCCCceeEeeEe
Q 006656 410 VIDILPR-----CLSSK-YLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYY 464 (636)
Q Consensus 410 ViDiLp~-----~vSSV-Y~fYDPdy~~~SLGt~saL~EI~~ar~l~~~~P~l~yyYlGYy 464 (636)
.+..... ..--+ .++-+|+|....+|+..+-.-+++|++.+ +..+++.-.
T Consensus 90 ~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g-----~~~i~l~~~ 145 (183)
T 3i9s_A 90 TYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHN-----CQRLDWTAE 145 (183)
T ss_dssp EEEEESCCGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTT-----EEEEEEEEE
T ss_pred EEEEecCCCCCCCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHHcC-----CCEEEEEEe
Confidence 8875532 12122 45679999999999998888888998884 676766543
|
| >1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A | Back alignment and structure |
|---|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* | Back alignment and structure |
|---|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 | Back alignment and structure |
|---|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} | Back alignment and structure |
|---|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* | Back alignment and structure |
|---|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A | Back alignment and structure |
|---|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 636 | |||
| d1lrza3 | 182 | Methicillin resistance protein FemA {Staphylococcu | 93.42 | |
| d1qsma_ | 150 | Histone acetyltransferase HPA2 {Baker's yeast (Sac | 89.4 | |
| d1y7ra1 | 133 | Hypothetical protein SA2161 {Staphylococcus aureus | 88.68 | |
| d1ne9a2 | 171 | Peptidyltransferase FemX {Weissella viridescens [T | 87.23 | |
| d2jdca1 | 145 | Probable acetyltransferase YitI {Bacillus lichenif | 85.85 | |
| d1z4ea1 | 150 | Transcriptional regulator BH1968 {Bacillus halodur | 81.28 | |
| d1ghea_ | 170 | Tabtoxin resistance protein {Pseudomonas syringae | 80.54 |
| >d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Methicillin resistance protein FemA species: Staphylococcus aureus [TaxId: 1280]
Probab=93.42 E-value=0.1 Score=46.57 Aligned_cols=136 Identities=9% Similarity=0.028 Sum_probs=85.2
Q ss_pred CcEEEEecCCCChHHHHHHHHHHHhHcCCCCCCCCHHHHHHHhhcCCCcccCCCCCCCCCCCCCcceEEEEeeCCeEEEE
Q 006656 329 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAV 408 (636)
Q Consensus 329 ~l~v~l~~~~~~~E~~~LY~rYq~~~H~d~~~~~s~~~y~~FL~~spl~~~~~~~~~~~~~~~~Gs~h~~YrlDgkLIAV 408 (636)
.++|+.....--++-++||..-. .+|+-. ..+.+-|..++..-+= . ..-...+.+|++||.
T Consensus 25 gv~i~~~~~~~l~~f~~l~~~~~-~r~g~~--~~~~~~~~~l~~~~~~--------------~--~~l~~a~~~~~~ia~ 85 (182)
T d1lrza3 25 GVKVRFLSEEELPIFRSFMEDTS-ESKAFA--DRDDKFYYNRLKYYKD--------------R--VLVPLAYINELPISA 85 (182)
T ss_dssp SCEEEECCGGGHHHHHHHC---------------CHHHHHHHHHHHGG--------------G--EECEEEEEEEEEEEE
T ss_pred CCEEEEcCHHHHHHHHHHHHHHH-HhcCCC--CCCHHHHHHHHHhccc--------------c--EeeeeeecCCccEEE
Confidence 46666543222234455555422 334322 3456666666543210 0 233445679999999
Q ss_pred EEEecCCCcccceeeeeCCCcCcCCchhHHHHHHHHHHHHhcccCCCCceeEeeEeecC--CC------cccccccCCCC
Q 006656 409 GVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHS--CR------KMRYKAAYHPS 480 (636)
Q Consensus 409 gViDiLp~~vSSVY~fYDPdy~~~SLGt~saL~EI~~ar~l~~~~P~l~yyYlGYyIh~--Cp------KM~YK~~f~P~ 480 (636)
+++=+.++.+--.|.-.||++..++.+.+..-.-|++|++.+ +++|-||= |.. .+ =++||..|.+.
T Consensus 86 ~l~~~~~~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G-----~~~~D~gG-~~~~~~~~~~~~Gl~~FK~~fg~~ 159 (182)
T d1lrza3 86 GFFFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHG-----IDRYNFYG-VSGKFTEDAEDAGVVKFKKGYNAE 159 (182)
T ss_dssp EEEEECSSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTT-----CCEEEEEE-CCSCCSTTCTTHHHHHHHHTTTCE
T ss_pred EEEEeechhheeeeceeccchhhcCchHHHHHHHHHHHHHcC-----CcEEEecC-cCCCCCCCcccchHHHHHHhcCCc
Confidence 999888888887777899999999999999989999999995 99999964 322 11 24899999887
Q ss_pred ccccCCCCcee
Q 006656 481 ELLCPLRYQWV 491 (636)
Q Consensus 481 elL~p~t~~W~ 491 (636)
.+-=+ +.|.
T Consensus 160 ~v~~~--g~~~ 168 (182)
T d1lrza3 160 IIEYV--GDFI 168 (182)
T ss_dssp EEEEC--CCEE
T ss_pred eeeec--ceEe
Confidence 54222 3575
|
| >d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} | Back information, alignment and structure |
|---|
| >d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|