Citrus Sinensis ID: 006687

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-----
MLSNQEVSEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTLDLNPTSEKDKSATSNELGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
ccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccccEEEEEEEcccccccEEEEEEEEEcccccccccHHHHHHHHHHHHHHcccccccccEEEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEEEEccccccccEEEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEcccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccc
cccccEccHHHccccHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccEEcccccccccEEEEEEEEcccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHccHHcccEEEEEccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHEEEEEcccccccEEEEEEEEEccccccccHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccc
MLSNQEVSEANKLIKELNnlhsnplgatteSHGIIAKYMSNlgaqvnnhkfhpqlnqfhplhffsgpdsgvmqenstrslygintvgiiraprgdgkeAIVLVTpynavkggVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVadsqygeyapvaawlrdyhtpafsnldslntetchvgnnnfeskisygIRRSGTMAAALVLGVAygnenedtLGIYaeasngqmpnldlINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKtlnpdwklgISAADYVEGAATLASSLYHqalgvptgphgafrdyQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKtldlnptsekdksatsneLGSVLQSWKWLNSVKTVFVVHFWGATVSLLpyfisqipdsdpttnFSVWILLSILSLEILRWILVspsshiyglpqgewatlksaTISSFFIGLGLMSVINFATAEIGALLMVPMALMahplkldvRGQSLRSILRMICNLVLgvisfppatfFVFKGViegfsginagdFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
MLSNQEVSEANKLIKElnnlhsnplGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGiiraprgdgkEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTLDLnptsekdksatsnELGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
MLSNQEVSEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFallvaplpvvaaSLYAKTLDLNPTSEKDKSATSNELGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVwillsilsleilrwilVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
******************************SHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSG**********TRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTLDL***************GSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLH**
**SNQEVSEANKLIKELNN*************GIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFS***************NFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTLDL*****************VLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
*********ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTLDLNP*************GSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
*LSNQEVSEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGN*NFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTLD*******************LQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
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MLSNQEVSEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTLDLNPTSEKDKSATSNELGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query635 2.2.26 [Sep-21-2011]
Q9WTK3621 Glycosylphosphatidylinosi yes no 0.639 0.653 0.264 8e-27
O43292621 Glycosylphosphatidylinosi yes no 0.642 0.657 0.259 2e-24
Q9US48581 GPI transamidase componen yes no 0.516 0.564 0.267 3e-24
P39012614 GPI transamidase componen yes no 0.437 0.452 0.274 1e-18
>sp|Q9WTK3|GPAA1_MOUSE Glycosylphosphatidylinositol anchor attachment 1 protein OS=Mus musculus GN=Gpaa1 PE=1 SV=3 Back     alignment and function desciption
 Score =  122 bits (306), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 206/473 (43%), Gaps = 67/473 (14%)

Query: 82  GINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIW 141
           G N  GI+RAPR    E++VL  P          + ++G+  ++ +      + AKDII+
Sbjct: 126 GTNVYGILRAPRSASTESLVLTVPCGP---DATNSQAVGLLLALAAHFRGQIYWAKDIIF 182

Query: 142 LVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAA 201
           LV D    +     AWL  YH    + + S   +                  R+G + AA
Sbjct: 183 LVTDH---DLLGTEAWLEAYHDINVTGIQSSPLQG-----------------RAGAIQAA 222

Query: 202 LVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSKW 261
           + L ++  ++   +L +  E  NGQ+PNLDL+N+       + GL   ++          
Sbjct: 223 VALELS--SDVVTSLDVTVEGLNGQLPNLDLLNLFQTFC-QKGGLLCTLQ---------- 269

Query: 262 VKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDY 321
                      GK+      DW    S    ++G  TL   +  QA G P GPHG F  Y
Sbjct: 270 -----------GKLQPQ---DWT---SLEGPLQGLQTLLLMVLRQASGRPHGPHGLFLRY 312

Query: 322 QVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSK 381
            V+A+TL        +   +    L   G+ +EG+ R +N+LLE+ HQSFF YLL + S+
Sbjct: 313 GVEALTLR-----GINSFRQYKYDLATVGKALEGMFRKLNHLLERLHQSFFFYLLPALSR 367

Query: 382 FVSVGVYMIAFALLVAPLPVVAASLYAKTLDLNPTSEKDKSATSNELGSVLQSWKWLNSV 441
           FVS+G+YM A   L+  L + A  L+ +        E+   A S     +      L S+
Sbjct: 368 FVSIGLYMPATGFLLLVLGLKALELWMQLHQAGVNPEEAGKAPSPGTPLLPTQGVGLASL 427

Query: 442 KTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSV----WILLSILSLEILRWILVSPSSH 497
               ++      + L  YF+  +     T +F V     ++L++L++ +    L   +  
Sbjct: 428 TAPLLI---SQAMGLALYFLPVLGQHLATQHFPVAEAEAVVLTLLAIYVAGLALPHNTHR 484

Query: 498 IYG--LPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHP 548
           +    +P   W  LK   +    + LG ++++NF+   + A  MVP A +A P
Sbjct: 485 VVNSQVPDRGWMALKLVALIYLALQLGCIALLNFSLGFLLAATMVPAAALAKP 537
Essential for GPI-anchoring of precursor proteins but not for GPI synthesis. Acts before or during formation of the carbonyl intermediate.
Mus musculus (taxid: 10090)
>sp|O43292|GPAA1_HUMAN Glycosylphosphatidylinositol anchor attachment 1 protein OS=Homo sapiens GN=GPAA1 PE=1 SV=3 Back     alignment and function description
>sp|Q9US48|GAA1_SCHPO GPI transamidase component gaa1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gaa1 PE=3 SV=1 Back     alignment and function description
>sp|P39012|GAA1_YEAST GPI transamidase component GAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAA1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
224060139716 predicted protein [Populus trichocarpa] 0.998 0.885 0.666 0.0
356511698705 PREDICTED: glycosylphosphatidylinositol 0.982 0.885 0.636 0.0
356573335707 PREDICTED: glycosylphosphatidylinositol 0.990 0.889 0.632 0.0
357520045701 GPI transamidase component gaa1 [Medicag 0.981 0.888 0.637 0.0
359488887701 PREDICTED: glycosylphosphatidylinositol 0.976 0.884 0.636 0.0
296087611690 unnamed protein product [Vitis vinifera] 0.966 0.889 0.639 0.0
449483788714 PREDICTED: glycosylphosphatidylinositol 1.0 0.889 0.64 0.0
449450074714 PREDICTED: LOW QUALITY PROTEIN: glycosyl 1.0 0.889 0.638 0.0
147783377 1027 hypothetical protein VITISV_026168 [Viti 0.946 0.585 0.630 0.0
297812099699 hypothetical protein ARALYDRAFT_488797 [ 0.973 0.884 0.587 0.0
>gi|224060139|ref|XP_002300056.1| predicted protein [Populus trichocarpa] gi|222847314|gb|EEE84861.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/651 (66%), Positives = 515/651 (79%), Gaps = 17/651 (2%)

Query: 1   MLSNQEVSEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHP 60
           M+SN+++SEAN+L  +L+ L+  P  A     GI+ KYMS+LGA+V+ HKFH + NQFHP
Sbjct: 67  MISNRDISEANRLASDLSGLNFEPQDAAA-FRGILTKYMSDLGAEVSYHKFHHKPNQFHP 125

Query: 61  LHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLG 120
           LHFFS PDS    +N + S +G+NTVGIIRAPRGDGKEAIVLVTPY   K G  ETLSL 
Sbjct: 126 LHFFSSPDSTSSVKNFSCSAHGVNTVGIIRAPRGDGKEAIVLVTPYKFGKSGAAETLSLS 185

Query: 121 IAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVG 180
           IAY+VFSLL+RVTWLAKDIIW VADSQYGEYAPV AWLRDYHTP F+ L +LN +TC   
Sbjct: 186 IAYTVFSLLSRVTWLAKDIIWFVADSQYGEYAPVEAWLRDYHTPVFTGLGTLNADTCVKI 245

Query: 181 NNNF--------ESKISYGIRRSGTMAAALVLGVAYGNEN-EDTLGIYAEASNGQMPNLD 231
           ++ +        + KIS G RR+GTMAAAL+L VA  NE  EDTL IYAEASNGQMPNLD
Sbjct: 246 DDLYVFEQKSIVQRKISDGFRRAGTMAAALILKVADRNELLEDTLNIYAEASNGQMPNLD 305

Query: 232 LINIVHYLAVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAAD 291
           LINIV+YLAVHRQGLRVKVE+   LL+ +W++ LGE+FE LGK+ ++LNP WK GISAAD
Sbjct: 306 LINIVNYLAVHRQGLRVKVEKVLTLLDLRWLEILGEMFELLGKVARSLNPGWKFGISAAD 365

Query: 292 YVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGR 351
           Y+EG+ATLASSLY+QALG+PTGPHGAFRD+QVDAITLE S ++      R N+FLL GGR
Sbjct: 366 YIEGSATLASSLYYQALGIPTGPHGAFRDFQVDAITLEISPKVFPHNKARHNEFLLRGGR 425

Query: 352 LIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKT- 410
           L+EGVIRS+NNLLEKFHQSFFLY+LTSPSKFVSVGVYMIAFALLVAPLP+VAASLYA   
Sbjct: 426 LVEGVIRSINNLLEKFHQSFFLYMLTSPSKFVSVGVYMIAFALLVAPLPLVAASLYADAN 485

Query: 411 -LDLNPTSEKD--KSATSNELGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDS 467
            LDL   + K    +  S+EL    +SWKWL + K VF++H WGA VSLLPYFI QIP+ 
Sbjct: 486 QLDLGVKNTKSTPTATASDELDITFRSWKWLYAAKEVFLIHVWGAAVSLLPYFICQIPNC 545

Query: 468 DPTTNFSVWILLSILSLEILRWILVSPSSHI-YGLPQ--GEWATLKSATISSFFIGLGLM 524
            PT++  +W+ LS+LSL IL  I+ SPS+H+    P+  GEWA LKSATIS+ FIGL +M
Sbjct: 546 SPTSSSVIWVFLSMLSLLILYLIVGSPSTHVSISQPEEKGEWAILKSATISAVFIGLLVM 605

Query: 525 SVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFK 584
           SV+NFA AEIGALL+VPM LMA PLKLD++   LRS LR+ICN+VLG ++FPPA FFV K
Sbjct: 606 SVVNFAAAEIGALLLVPMCLMAQPLKLDMKAGKLRSFLRIICNVVLGFVAFPPAAFFVVK 665

Query: 585 GVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHPC 635
            + EGF  IN GDFWNW+ESLWAWNSATY+YIGMVHLPCWVLC+ ILLH C
Sbjct: 666 TIFEGFDSINMGDFWNWMESLWAWNSATYIYIGMVHLPCWVLCLHILLHSC 716

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356511698|ref|XP_003524560.1| PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356573335|ref|XP_003554817.1| PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein-like [Glycine max] Back     alignment and taxonomy information
>gi|357520045|ref|XP_003630311.1| GPI transamidase component gaa1 [Medicago truncatula] gi|355524333|gb|AET04787.1| GPI transamidase component gaa1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|359488887|ref|XP_002274196.2| PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|296087611|emb|CBI34867.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449483788|ref|XP_004156691.1| PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449450074|ref|XP_004142789.1| PREDICTED: LOW QUALITY PROTEIN: glycosylphosphatidylinositol anchor attachment 1 protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147783377|emb|CAN59886.1| hypothetical protein VITISV_026168 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297812099|ref|XP_002873933.1| hypothetical protein ARALYDRAFT_488797 [Arabidopsis lyrata subsp. lyrata] gi|297319770|gb|EFH50192.1| hypothetical protein ARALYDRAFT_488797 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
TAIR|locus:2182197699 AT5G19130 "AT5G19130" [Arabido 0.968 0.879 0.572 3.1e-186
DICTYBASE|DDB_G0287287752 DDB_G0287287 "Glycosylphosphat 0.130 0.110 0.489 3.8e-26
FB|FBgn0029818674 CG3033 [Drosophila melanogaste 0.163 0.154 0.380 8.4e-26
MGI|MGI:1202392621 Gpaa1 "GPI anchor attachment p 0.459 0.470 0.277 4.6e-24
UNIPROTKB|Q6PA87615 gpaa1 "MGC68658 protein" [Xeno 0.492 0.508 0.240 4.9e-24
UNIPROTKB|E2REN2621 GPAA1 "Uncharacterized protein 0.462 0.473 0.272 2.1e-23
UNIPROTKB|Q6AYM8621 Gpaa1 "Glycosylphosphatidylino 0.462 0.473 0.269 2.6e-23
UNIPROTKB|Q58CZ3568 GPAA1 "Uncharacterized protein 0.453 0.507 0.267 3.4e-22
UNIPROTKB|G4N7S2606 MGG_03523 "GPI transamidase co 0.143 0.150 0.414 4e-22
ASPGD|ASPL0000014407631 AN10439 [Emericella nidulans ( 0.141 0.142 0.387 3.6e-21
TAIR|locus:2182197 AT5G19130 "AT5G19130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1806 (640.8 bits), Expect = 3.1e-186, P = 3.1e-186
 Identities = 367/641 (57%), Positives = 449/641 (70%)

Query:     1 MLSNQEVSEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHP 60
             MLSN++VS+ +KL+K++ N   N  G   E   +I KYMS++GA+V+  KFHP+ NQFHP
Sbjct:    77 MLSNRDVSDGSKLVKDIKNFRLNHEGQGVEVQKLIGKYMSDMGAEVSYQKFHPEGNQFHP 136

Query:    61 LHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLG 120
             LHFFSGPDS  + EN + + YG+N  GIIRAPRGDGKE+IVLVTPY+ + GG  E LSLG
Sbjct:   137 LHFFSGPDSYTLLENVSCASYGVNVAGIIRAPRGDGKESIVLVTPYDFINGGDYEDLSLG 196

Query:   121 IAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVG 180
             I  S+FSLL+RVTWL+KDIIWLVADS+YG+Y PVAAWL +YH+P+F   D L  +  +  
Sbjct:   197 IVSSLFSLLSRVTWLSKDIIWLVADSRYGDYRPVAAWLTEYHSPSFKVSDLLKCDEQNTA 256

Query:   181 NNNFESKISYGIRRSGTMAAALVLGVAYGNEN-EDTLGIYAEASNGQMPNLDLINIVHYL 239
             +N          RR+GTMAAALVL V   +E  EDTL IYAEASNGQMPNLDLIN+V+YL
Sbjct:   257 DN---------FRRAGTMAAALVLKVDGRSEKFEDTLSIYAEASNGQMPNLDLINVVNYL 307

Query:   240 AVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATL 299
             AVHRQG  VKVE+   LL+S W+K  GE+FE++GK+   LNPDW  GI AADY+EG+ATL
Sbjct:   308 AVHRQGFYVKVEKVVSLLSSSWLKIFGEIFEAVGKLAHMLNPDWNFGIPAADYLEGSATL 367

Query:   300 ASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRS 359
             ASSLY QALG+PTGPHGAFRDYQVDAITL+ S R   D   R++DF L G RL+EG IRS
Sbjct:   368 ASSLYSQALGIPTGPHGAFRDYQVDAITLKVSPRFPPDSKTRQHDFFLRGARLLEGTIRS 427

Query:   360 VNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFXXXXXXXXXXXXSLYAKTLDLNPTSEK 419
             VNNLLEKFHQSFFLY+LTSPSKF+SVGVYMIAF            SLY         +  
Sbjct:   428 VNNLLEKFHQSFFLYMLTSPSKFISVGVYMIAFALLVAPLPMVAASLYID--GCKSLTNS 485

Query:   420 DKSATSNELGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDPTTNFSVXXXX 479
               + T N      +SWKWL++ K VF +H  G  V+LLPYFI Q+P     TN S+    
Sbjct:   486 THNPTEN-----FKSWKWLDAAKQVFTLHLLGFIVTLLPYFICQVPGQHSPTNRSIMWGT 540

Query:   480 XXXXXXXXXXXXV---SP-SSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIG 535
                         +   SP SS ++G     WA LKS TIS+ FIGL LMS+INFATAEIG
Sbjct:   541 TSSSLLLITFVTMPGCSPFSSRLHGT---NWAILKSVTISAAFIGLCLMSIINFATAEIG 597

Query:   536 ALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVI-EGFSGIN 594
             ALL+VP  LMA P+K  +R + L+S+L   C++VL  I FP   F + KG++ EG  G++
Sbjct:   598 ALLLVPTCLMAQPIKPALRSRRLKSLLGAFCSIVLLTIGFPVMFFAISKGLLGEGLVGLS 657

Query:   595 -AGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHP 634
               G+FW W+ESLWAW SATYLYIGMVHLPCW+LC+ IL HP
Sbjct:   658 LGGEFWTWLESLWAWKSATYLYIGMVHLPCWLLCLCILFHP 698
GO:0003923 "GPI-anchor transamidase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0042765 "GPI-anchor transamidase complex" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
DICTYBASE|DDB_G0287287 DDB_G0287287 "Glycosylphosphatidylinositol anchor attachment 1 protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0029818 CG3033 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:1202392 Gpaa1 "GPI anchor attachment protein 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q6PA87 gpaa1 "MGC68658 protein" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|E2REN2 GPAA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q6AYM8 Gpaa1 "Glycosylphosphatidylinositol anchor attachment protein 1 homolog (Yeast)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q58CZ3 GPAA1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|G4N7S2 MGG_03523 "GPI transamidase component GAA1" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000014407 AN10439 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
pfam04114498 pfam04114, Gaa1, Gaa1-like, GPI transamidase compo 5e-48
>gnl|CDD|217905 pfam04114, Gaa1, Gaa1-like, GPI transamidase component Back     alignment and domain information 
 Score =  175 bits (445), Expect = 5e-48
 Identities = 136/571 (23%), Positives = 224/571 (39%), Gaps = 105/571 (18%)

Query: 81  YGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDII 140
           YG N  GI+RAPRGD  E++VL  P+            + +  S+     R  + +KDII
Sbjct: 2   YGENLYGILRAPRGDSTESLVLAVPWFNSDSETNSA-GVALLLSLARFFRRWPYWSKDII 60

Query: 141 WLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAA 200
           +++ ++       + +WL  YH      +     +                  R+G++ A
Sbjct: 61  FVITEN---PRLGLRSWLEAYHDSTTPYISYTPLDL-----------------RAGSIQA 100

Query: 201 ALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSK 260
           A+VL ++   +  + + +  E  NGQ+PNLDL N+   +  H   ++             
Sbjct: 101 AVVLELSSTEDFSEYVEVSYEGLNGQLPNLDLFNLAQRITEHEGFMKYS----------- 149

Query: 261 WVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRD 320
            +        S     + L                   L   +  QA    TGPHG F  
Sbjct: 150 -LHLQPSDQHSNSGFWQRLK-----------------ILLLGILDQASSGVTGPHGLFSR 191

Query: 321 YQVDAITLEFS--LRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTS 378
           Y++DA+TL        S D        +   G+ IEG+ RS+NNLLE+FHQSFF YLL +
Sbjct: 192 YRIDALTLRMKAHGNSSHD--------ITAFGKAIEGMFRSLNNLLERFHQSFFFYLLLA 243

Query: 379 PSKFVSVGVYMIAFALLVAPLPVVA----ASLYAKTLDLNPTSEKDKSATSNELGSVLQS 434
           P +FVS+G YM +   L A   + A     +L+   + L   S     A    L S++ S
Sbjct: 244 PRRFVSIGSYMPSAVALSAAFALKALNAWINLHEANISLE--SPYGLVALLVWLVSLVIS 301

Query: 435 WK----WLNSVKTVFVVHFWGATVSLLP----YFISQIPDSDPTTNFSVWILLSILSLEI 486
           +     +L+    + +    GA+  +L      F      S    N    + LS++S   
Sbjct: 302 FVVSLAFLSIPAYLLLSTISGASCFVLLILSQKFHIIEFLSARLKN-VALLYLSLVST-- 358

Query: 487 LRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMA 546
                        GL    +A L    + +F + L ++ ++NF+   + A L VP+A   
Sbjct: 359 -------------GLLLPNFAMLLLIGLLAFPLTLVVIILLNFSLGFVTAQLSVPIATEP 405

Query: 547 HP------LKLDVRGQSLRSILRMICNLVLGVISFP--PATFF--VFKGVIEGFSGINAG 596
                     + +   +L    + +  LVL +++ P  P T F          F  +  G
Sbjct: 406 KDENERVENHMTLTPATLVQQSQKLKLLVLLILTNPFIPETPFGLFADDEFLFFDALAKG 465

Query: 597 DFWNWVESLWAWNSATYLYIGMVHLPCWVLC 627
                    W +       + +  LPCW+L 
Sbjct: 466 VSAWLDLGCWLF-----FVLCIGFLPCWLLI 491

GPI (glycosyl phosphatidyl inositol) transamidase is a multi-protein complex. Gpi16, Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase that adds glycosylphosphatidylinositols (GPIs) to newly synthesised proteins. Length = 498

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 635
PF04114504 Gaa1: Gaa1-like, GPI transamidase component ; Inte 100.0
KOG3566617 consensus Glycosylphosphatidylinositol anchor atta 100.0
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 98.58
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 97.42
PRK06133410 glutamate carboxypeptidase; Reviewed 96.9
PRK08596421 acetylornithine deacetylase; Validated 96.82
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 96.8
TIGR01883361 PepT-like peptidase T-like protein. This model rep 96.71
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 96.7
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 96.53
PRK09133472 hypothetical protein; Provisional 96.45
PRK12892412 allantoate amidohydrolase; Reviewed 96.43
PRK12891414 allantoate amidohydrolase; Reviewed 96.41
PRK12890414 allantoate amidohydrolase; Reviewed 96.4
PRK05111383 acetylornithine deacetylase; Provisional 96.09
PRK07473376 carboxypeptidase; Provisional 96.07
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 96.07
PRK09290413 allantoate amidohydrolase; Reviewed 95.97
PRK07522385 acetylornithine deacetylase; Provisional 95.97
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 95.87
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 95.77
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 95.72
PRK07906426 hypothetical protein; Provisional 95.65
PRK08652347 acetylornithine deacetylase; Provisional 95.64
PRK12893412 allantoate amidohydrolase; Reviewed 95.63
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 95.54
PRK13983400 diaminopimelate aminotransferase; Provisional 95.37
PRK06837427 acetylornithine deacetylase; Provisional 95.36
PRK06915422 acetylornithine deacetylase; Validated 95.33
PRK06446436 hypothetical protein; Provisional 95.12
PRK13381404 peptidase T; Provisional 95.11
PRK13004399 peptidase; Reviewed 95.01
PRK07907449 hypothetical protein; Provisional 95.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 94.94
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 94.85
PRK07338402 hypothetical protein; Provisional 94.64
PRK04443348 acetyl-lysine deacetylase; Provisional 94.54
PRK09104464 hypothetical protein; Validated 94.51
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 94.23
PRK05469408 peptidase T; Provisional 94.08
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 94.04
PLN02693437 IAA-amino acid hydrolase 93.98
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 93.96
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 93.95
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 93.94
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 93.77
PRK00466346 acetyl-lysine deacetylase; Validated 93.63
PRK08201456 hypothetical protein; Provisional 93.58
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 93.53
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 92.79
PRK07205444 hypothetical protein; Provisional 92.77
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 92.71
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 92.65
TIGR01891363 amidohydrolases amidohydrolase. This model represe 92.63
PRK08262486 hypothetical protein; Provisional 91.85
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 91.7
COG2234435 Iap Predicted aminopeptidases [General function pr 90.3
PRK07318466 dipeptidase PepV; Reviewed 90.15
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 90.14
PLN02280478 IAA-amino acid hydrolase 89.98
PRK08554438 peptidase; Reviewed 89.78
PRK07079469 hypothetical protein; Provisional 87.79
KOG2526555 consensus Predicted aminopeptidases - M20/M25/M40 85.38
COG4187553 RocB Arginine degradation protein (predicted deacy 84.48
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 83.26
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 82.43
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 81.75
PRK06156520 hypothetical protein; Provisional 80.68
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins Back     alignment and domain information 
Probab=100.00  E-value=5.7e-108  Score=908.60  Aligned_cols=487  Identities=37%  Similarity=0.563  Sum_probs=364.9

Q ss_pred             cccceEEEEEcCCCCCCceeEEEEEEeccCCCCCcchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHH
Q 006687           80 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLR  159 (635)
Q Consensus        80 ~~G~NvygIlrApRgdgtEAiVL~ap~~~~~~~~~~~~~valaLaLa~y~~r~~~wAKDIIfl~~D~~~~~~~G~~AWL~  159 (635)
                      ++|+|||||+|||||||||||||+|||++.+++.| ..|+++++||+||+||++||||||||||+|+   +..|+|||||
T Consensus         1 ~~G~nvy~i~rapR~d~tEaivl~~~~~~~~~~~n-~~~v~l~lal~~~~~~~~~wsKDii~l~~~~---~~~g~~awl~   76 (504)
T PF04114_consen    1 YSGTNVYGILRAPRGDGTEAIVLVVPWRDSDGEYN-AGGVALALALARYFRRQSYWSKDIIFLFTDD---ELAGMQAWLE   76 (504)
T ss_pred             CCceEEEEEEecCCCCCceeEEEEEecCCCCcccc-hhhHHHHHHHHHHhhhchhhhccEEEEecCC---cchHHHHHHH
Confidence            37999999999999999999999999998887666 7799999999999999999999999999996   5789999999


Q ss_pred             hhcCCCCCCCCccccccccCCCCCcccccccccccchheeeeeEEeecCCCCCcceEEEEeecCCCCCCchhHHHHHHHH
Q 006687          160 DYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYL  239 (635)
Q Consensus       160 aYh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~raG~IqaAl~le~~~~~~~~~~l~I~~eG~NGqLPNLDLiN~v~~i  239 (635)
                      |||+++.++...                 ...+.|+|+||||+++|++++  .+++++|++||+|||||||||||+++++
T Consensus        77 ~Yh~~~~~~~~~-----------------~~l~~~~G~i~aAl~le~~~~--~~~~v~i~~eG~NGqLPNLDL~N~~~~i  137 (504)
T PF04114_consen   77 AYHDSNTKGLSS-----------------SPLPLRAGSIQAALVLEYPSD--SFSSVEIKYEGLNGQLPNLDLVNTVVRI  137 (504)
T ss_pred             HHhCCCCccccc-----------------cCCCCCCcceeEEEEEEecCC--CccEEEEEEecCCCCCCCchHHHHHHHH
Confidence            999975322111                 123469999999999999976  5677999999999999999999999999


Q ss_pred             HhhccCceeEEeeeccccchhhhhhhhhhHhhhhhhhhccCCCcccCCChhhHHHHHHHHHHHHHHhhcCCCCCcccccc
Q 006687          240 AVHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFR  319 (635)
Q Consensus       240 a~~~~g~~v~l~~~~~~~~~~w~~~~~~i~e~~g~~~~~~~p~~~~~~~~~~Y~~~l~tll~~m~~qa~G~ptg~Hg~F~  319 (635)
                      ++ ++|++++++....                        .++|.   +.++|.+++++|+++|.+||+|.|+|+||+|+
T Consensus       138 ~~-~~gi~~~~~~~~~------------------------~~~~~---~~~~~~~~l~~l~~~~~~~a~g~p~g~H~~f~  189 (504)
T PF04114_consen  138 AE-KEGIPMGVSLHLQ------------------------PSDWH---SNSDYESRLKTLLRGMLNQALGGPTGPHGAFL  189 (504)
T ss_pred             HH-hcCCCcccccccc------------------------ccccc---cccchHHHHHHHHHHHHHhccCCCCCCchhhh
Confidence            97 6887776543111                        01111   34589999999999999999999999999999


Q ss_pred             ccccceEEEEeeccccccccccchhhHhhhHHHHHHHHHhhchhhhhhhcceeeeeeCCCCceEeechhHHHHHHHHhch
Q 006687          320 DYQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPL  399 (635)
Q Consensus       320 ~y~IdAiTL~~~~~~~~~~~~~~~~~~~~lGr~iE~~~RSlNNLLErlHqSfFfYlL~s~~rFVSIg~Ylpp~~Ll~a~l  399 (635)
                      +||||||||++.+..++   +. .+ +.++||++|+++||+||||||||||||||+|++|+||||||+||||++++++++
T Consensus       190 ~y~I~aiTl~~~~~~~~---~~-~~-~~~~gr~~E~~~RslNNLlE~~HqSff~Yll~~~~~fvsig~Ylp~~~ll~~~~  264 (504)
T PF04114_consen  190 RYRIDAITLRGVKSTGP---GP-HD-FTAFGRILEGIFRSLNNLLERFHQSFFFYLLLSPSRFVSIGTYLPAAVLLAASL  264 (504)
T ss_pred             hcCccEEEEecccCCCC---CC-cC-HHHHHHHHHHHHHHHHHHHHhHhheeeEeEecCCceEeehHHHHHHHHHHHHHH
Confidence            99999999987654321   12 22 468999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCccCCCCCc--cc----ccccccccchhhhHHHHHHHHHHHHHHHhHhHHhhhcCCCCC---c
Q 006687          400 PVVAASLYAKTLDLNPTSEKDKSATS--NE----LGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDP---T  470 (635)
Q Consensus       400 ~i~a~~l~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~v~~~h~~G~~~~~lp~~~~~~~~~~~---~  470 (635)
                      +++|+.+|.+.+......+++++..+  ..    .........+......+++.|+.|+.++++|....++.....   .
T Consensus       265 ~i~a~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~  344 (504)
T PF04114_consen  265 LISALSLWLKSGASDISLESEYGSSAPSFWFVSLLESFGFSLPFLSVLSPLLVSHLIGFLLFLLPYLGQYIASQHFPSFR  344 (504)
T ss_pred             HHHHHHHHHhCCccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhh
Confidence            99999999986532221111111000  00    111111234677788888999999998888755444432111   1


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhCCCccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 006687          471 TNFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLK  550 (635)
Q Consensus       471 ~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~lk~~~Ll~~~~~l~~la~lNFsLa~~~al~~vPl~l~~~p~~  550 (635)
                      ....++..++++..++       |....  .|+++|.++|+++|++++++|++++++|||||+++|+++||+|++++|.+
T Consensus       345 ~~~~~~~~lsl~~l~l-------~~~~~--~~~~~~~llk~~~Ll~~~~~L~~la~lNFSLa~l~all~vPl~~~~~~~~  415 (504)
T PF04114_consen  345 LESVVLLYLSLISLLL-------PFRVV--LPPQQWALLKSFSLLLLGMFLSALATLNFSLAFLVALLLVPLCFIPRPSK  415 (504)
T ss_pred             HHHHHHHHHHHHHHHh-------ccccc--CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceecccCCc
Confidence            1122233333311111       32111  35579999999999999999999999999999999999999999888765


Q ss_pred             cccccch-hHHHHH-----HHHHHHHhhhcChhhHHHHhhhhhhccccccHHHHHHHHhhh-hhccchhhhhhhhhhHhH
Q 006687          551 LDVRGQS-LRSILR-----MICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESL-WAWNSATYLYIGMVHLPC  623 (635)
Q Consensus       551 ~~~~~~~-~~~~~~-----~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~~v~~v~~P~  623 (635)
                      ++...++ ++..+.     .++++++.++.+|+......+...+ .+... .+.++.+.++ |+||+|||++||||||||
T Consensus       416 ~~s~~r~~~~~a~L~l~~~~v~~l~ll~ls~~~~~~~~~~~~~~-~~~~~-~~~l~~~v~~~~v~G~Wt~~vv~lv~lP~  493 (504)
T PF04114_consen  416 QRSTLRSSLRSAVLLLNPPAVVLLVLLFLSFPFFPELLLKLFLD-GWQAV-MDALTFAVFDWWVYGNWTFFVVCLVWLPC  493 (504)
T ss_pred             chhhhhHHHHHHHhcccchHHHHHHHHHhhcchHHHHHHHHHhh-hhhhH-HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            4311222 122211     1233344455455555544442222 22222 3455555555 599999999999999999


Q ss_pred             HHHHHHHhcc
Q 006687          624 WVLCVQILLH  633 (635)
Q Consensus       624 W~~~~~~~~~  633 (635)
                      |++||+++|.
T Consensus       494 Wll~w~i~f~  503 (504)
T PF04114_consen  494 WLLCWNILFW  503 (504)
T ss_pred             HHHHHHHHcc
Confidence            9999999984

Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.5 bits (112), Expect = 1e-05
 Identities = 55/330 (16%), Positives = 105/330 (31%), Gaps = 85/330 (25%)

Query: 255 WLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGP 314
           W L SK  + + + F     + + L  ++K  +S     +   ++ + +Y +        
Sbjct: 69  WTLLSKQ-EEMVQKF-----VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122

Query: 315 HGAFRDYQVDAITLEFSLRISFDRLDRRNDFLLHG----GR--LIEGVIRSVNNLLEKFH 368
           +  F  Y V  +     LR +   L    + L+ G    G+  +   V  S      K  
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS-----YKVQ 177

Query: 369 QSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVA--ASLYAKTLDLNPTSEKDKSAT-- 424
                             ++ +      +P  V+     L  + +D N TS  D S+   
Sbjct: 178 CKM------------DFKIFWLNLKNCNSPETVLEMLQKLLYQ-IDPNWTSRSDHSSNIK 224

Query: 425 ------SNELGSVLQSWKWLNSVKTVFVV--HFWGATVSLLPYFISQIPDSDPTTNFSVW 476
                   EL  +L+S  + N +    +V  +   A       F           N S  
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCL----LVLLNVQNAKA--WNAF-----------NLSCK 267

Query: 477 ILLSILSLEILRWILVSPSSHIY------GLPQGEWATLKSATISSFFIGLGLMSVINFA 530
           ILL+    ++  ++  + ++HI        L   E                 L+    + 
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE--------------VKSLLL--KYL 311

Query: 531 TAEIGALLMVPM-ALMAHPLKLDVRGQSLR 559
                 L   P   L  +P +L +  +S+R
Sbjct: 312 DCRPQDL---PREVLTTNPRRLSIIAESIR 338

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.12
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 98.91
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 98.86
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 98.86
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 98.81
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 98.8
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 98.66
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 98.3
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 98.24
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 97.82
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 97.72
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 97.47
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 97.39
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 97.16
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 97.14
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 96.93
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 96.85
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 96.84
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 96.74
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 96.72
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 96.68
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 96.49
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 96.48
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 96.43
3kas_A640 Transferrin receptor protein 1; transferrin recept 96.43
3k9t_A435 Putative peptidase; structural genomics, joint cen 96.41
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 96.36
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 96.34
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 96.28
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 96.01
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 95.97
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 95.91
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 95.82
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 95.74
1ylo_A348 Hypothetical protein SF2450; structural genomics, 95.67
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 95.62
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 95.59
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 95.55
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 95.5
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 95.42
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 95.31
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 95.19
1vho_A346 Endoglucanase; structural genomics, unknown functi 95.17
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 95.0
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 94.94
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 94.87
2gre_A349 Deblocking aminopeptidase; structural genomi prote 94.67
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 94.51
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 94.37
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 93.5
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 93.49
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 92.39
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 87.16
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
Probab=99.12  E-value=2.3e-09  Score=111.46  Aligned_cols=134  Identities=12%  Similarity=0.114  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHhhhcCCCCC-ccchHHHHHHHHHhcCCeeeeeccccCCccCCCccccCCCCCcccccCCccccccceEE
Q 006687            8 SEANKLIKELNNLHSNPLGA-TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV   86 (635)
Q Consensus         8 ~~a~~~~~ei~~l~~~~~~~-~~~~~~~i~~~l~~lGle~~~~~f~~~~~~f~~l~f~~~~~~~~~~~~~~~~~~G~Nvy   86 (635)
                      ..-++++++|-. -+.+++. .+++++||.++|+++|+++..|+|+....                 ..  ....+.||+
T Consensus        11 ~~~~~~l~~il~-PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~-----------------~~--~~~~~~Nii   70 (312)
T 4f9u_A           11 VHFNRTLDSILV-PRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVP-----------------VF--GELTFANVV   70 (312)
T ss_dssp             HHHHHHHHHHCS-CCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEET-----------------TT--EEEEEEEEE
T ss_pred             HHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecC-----------------CC--CceeEEEEE
Confidence            344555666521 1223332 55789999999999999999999976410                 01  135789999


Q ss_pred             EEEcCCCCCCceeEEEEEEeccCC--------CCCcchhhHHHHHHHHHHHhcC------CccccceEEEeeCCCCCC--
Q 006687           87 GIIRAPRGDGKEAIVLVTPYNAVK--------GGVRETLSLGIAYSVFSLLTRV------TWLAKDIIWLVADSQYGE--  150 (635)
Q Consensus        87 gIlrApRgdgtEAiVL~ap~~~~~--------~~~~~~~~valaLaLa~y~~r~------~~wAKDIIfl~~D~~~~~--  150 (635)
                      |.++.   ...|.|||.+.||+..        |..++++|+|.+|-+||.|+..      .--.|+|+|++.|+|+.+  
T Consensus        71 ~~~~~---~~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~  147 (312)
T 4f9u_A           71 GTINP---QAQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKE  147 (312)
T ss_dssp             EEEST---TSSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSS
T ss_pred             EEECC---CCCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCcccccc
Confidence            99976   3569999999999852        4556789999999999999631      224789999999997644  


Q ss_pred             ------chhHHHHHHhhcCC
Q 006687          151 ------YAPVAAWLRDYHTP  164 (635)
Q Consensus       151 ------~~G~~AWL~aYh~~  164 (635)
                            +.|.++|.+.|...
T Consensus       148 ~~~~~~L~GS~~~a~~~~~~  167 (312)
T 4f9u_A          148 WTDADSVYGSKHLAAKLASK  167 (312)
T ss_dssp             CSSSSSCHHHHHHHHHHHHC
T ss_pred             CCccccccChHHHHHHHHhh
Confidence                  78999999998653
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.12
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 98.89
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 98.77
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 98.65
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 98.51
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 98.49
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 98.4
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 98.2
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 98.11
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 98.0
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 97.87
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 96.99
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 96.83
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 96.62
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 96.61
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 95.43
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 94.22
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 92.98
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Aminopeptidase
species: Streptomyces griseus [TaxId: 1911]

Probab=99.12  E-value=1.5e-09  Score=109.27  Aligned_cols=109  Identities=8%  Similarity=0.057  Sum_probs=90.2

Q ss_pred             cchHHHHHHHHHhcCCeeeeeccccCCccCCCccccCCCCCcccccCCccccccceEEEEEcCCCCCCceeEEEEEEecc
Q 006687           29 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA  108 (635)
Q Consensus        29 ~~~~~~i~~~l~~lGle~~~~~f~~~~~~f~~l~f~~~~~~~~~~~~~~~~~~G~NvygIlrApRgdgtEAiVL~ap~~~  108 (635)
                      +.+++||.++|+++|+++..|.|+..                        ...+.||+|.+++++  ..|.|||.++||+
T Consensus        35 ~~a~~yi~~~l~~~G~~~~~~~~~~~------------------------~~~~~Nvi~~~~g~~--~~~~i~~~aH~D~   88 (277)
T d1tkja1          35 KASVDYVKAKLDAAGYTTTLQQFTSG------------------------GATGYNLIANWPGGD--PNKVLMAGAHLDS   88 (277)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEEEEEET------------------------TEEEEEEEEECSCSE--EEEEEEEEEECCC
T ss_pred             HHHHHHHHHHHHHCCCeEEEEeeecc------------------------CccccCeEEEECCCC--CCCEEEEEccccc
Confidence            35789999999999999999998653                        246889999997653  4588999999987


Q ss_pred             CC---CCCcchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCchhHHHHHHhhcC
Q 006687          109 VK---GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDYHT  163 (635)
Q Consensus       109 ~~---~~~~~~~~valaLaLa~y~~r~~~-wAKDIIfl~~D~~~~~~~G~~AWL~aYh~  163 (635)
                      ..   +..++++|++.+|.++|.|++..+ ..|+|+|++.|+++.+..|.++|++.+..
T Consensus        89 ~~~~~Ga~D~~sgva~~le~ar~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~  147 (277)
T d1tkja1          89 VSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPS  147 (277)
T ss_dssp             CTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCH
T ss_pred             cccccccCCCccchHHHHHHHHHHHhhcCCCCcceEEeecccccccccccHHHHHHhhc
Confidence            54   445668899999999999997654 47899999999887788999999987643
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure