Citrus Sinensis ID: 006694

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-----
MKKWFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQDSANQVISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR
ccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEccccccccEEEEEEcccccccEEEEEEEcccccccccccEEEEEEccccccccccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEccccccEEEEEcccEEcccccccccccccEEEEEEcccccccccccccccccccHHccccHHHHHcccccccccccEEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHccccccccccc
ccccHHHHHHHHHHHHHHHHcHHcccccccccccEcccccccccHHHcccccccccccccccccccccccEcccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcccHHcccccEEEEEccccEcccEEEEEEccccHHcEEEEEEEcccccccccccEEEEEcccccccccccccEEEEcccEccccccccHccccccccccHHccccHHHHHHHccccccccccccccHHHHcccccccccccccccccccccEEEEEEEEccccEEEEEcccEEEcccccccccHHHcccccccccccEHHHHHccccccccHHHHHHHHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHHHcHHcccccEEEEEEEEccccHHHHHHHHHHHHHHccEEEEccHcHHHHHHHHHHHHHHHcccccccEEEEEccccEEEcHHHHHHHHHcccccccEEEEEEEccccccccccccEEEcHHHccccccccccccccEEEcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccEEEccccccccccccccEEEEEcccHHHHHHHHHHHHcccccHHcccc
mkkwfggglIGFFLVLLVLRHAvlenpfgestlfvpvtinstdpleshqdavpptiepqdsanqvisADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMdsfgkdqhgdlngssvhkvkekqcphflsninatgfgdsgyrlripcgliqgssitiigipngllgdfridltgeptpgeadpplvlhynvrlhgdkvtenpvivQNTWtatqdwgeeercpspvpgknkkvdELKQCNEivgnnegrkltgnESSYISLRSSMERNktrasqyfpfkqGYLSVMTLRlgeegiqmtvdgkhitSFAFRESLEPWLVSEVRISGDLELISVLAsglptsevldeivdledlrsvplplhhrLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQtyrdiqlmpfVDYYSIITWKTVAICIFGTEVVSAKyvmktdddaFVRVDEVLASLNRANVTQGLLYGLinadarphrspdskwyispeewpessyppwahgpgyvVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMqvsyineprvynegcrDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR
MKKWFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQDSANQVISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWtatqdwgeeercpspvpgknkkvdeLKQCNeivgnnegrkltgneSSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLInadarphrspdSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR
MKKWfgggligfflvllvlRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQDSANQVISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKwyispeewpessyppwAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR
***WFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTIN************************VISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFG**************VKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGE******DPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDW*********************************************************QYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADA********KWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKC****
***WFGGGLIGFFLVLLVLRHAVLENPFGE*************************************************************WNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSF************************************GYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEP***EADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEEER***********VDELKQC*********************************SQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGL**********WTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERL*KCC***
MKKWFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQDSANQVISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR
*KKWFGGGLIGFFLVLLVLRHAVLENPFG*STLFVPVTINSTDPLESHQD******************DTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNG********KQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNN*********SSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLA******
iiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKKWFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQDSANQVISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query635 2.2.26 [Sep-21-2011]
Q8L7F9643 Beta-1,3-galactosyltransf yes no 0.995 0.982 0.585 0.0
Q9ASW1619 Probable beta-1,3-galacto no no 0.850 0.872 0.461 1e-142
Q8RX55672 Probable beta-1,3-galacto no no 0.963 0.910 0.322 1e-90
A7XDQ9684 Probable beta-1,3-galacto no no 0.963 0.894 0.32 3e-88
Q9LV16681 Probable beta-1,3-galacto no no 0.738 0.688 0.368 2e-87
Q8GXG6673 Probable beta-1,3-galacto no no 0.763 0.720 0.347 6e-86
Q9MYM7326 Beta-1,3-galactosyltransf N/A no 0.382 0.745 0.309 1e-25
Q7JK26326 Beta-1,3-galactosyltransf yes no 0.382 0.745 0.309 1e-25
Q7JK25326 Beta-1,3-galactosyltransf N/A no 0.382 0.745 0.309 1e-25
O54904326 Beta-1,3-galactosyltransf yes no 0.382 0.745 0.309 1e-25
>sp|Q8L7F9|B3GTF_ARATH Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1 Back     alignment and function desciption
 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/640 (58%), Positives = 481/640 (75%), Gaps = 8/640 (1%)

Query: 1   MKKWFGGGLI-GFFLVLLVLRHAVL----ENPFGESTLFVPVTINSTDPLESHQDAVPPT 55
           MK+++GG L+    + L V R+  L    E P+  +   V VT N+T P+E  +  +P  
Sbjct: 1   MKRFYGGLLVVSMCMFLTVYRYVDLNTPVEKPYITAAASVVVTPNTTLPMEWLRITLPDF 60

Query: 56  IEPQDSANQVISAD--TLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFR 113
           ++   +  + IS D   +VSGLF+ +N S+E +  L+TWNR++ L+  +Q L N V+A +
Sbjct: 61  MKEARNTQEAISGDDIAVVSGLFVEQNVSKEEREPLLTWNRLESLVDNAQSLVNGVDAIK 120

Query: 114 EAGVAWDNLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLI 173
           EAG+ W++L+ +    +  D+N +   K KE+ CP FLS +NAT    S  +L+IPCGL 
Sbjct: 121 EAGIVWESLVSAVEAKKLVDVNENQTRKGKEELCPQFLSKMNATEADGSSLKLQIPCGLT 180

Query: 174 QGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWT 233
           QGSSIT+IGIP+GL+G FRIDLTG+P PGE DPP+++HYNVRL GDK TE+PVIVQN+WT
Sbjct: 181 QGSSITVIGIPDGLVGSFRIDLTGQPLPGEPDPPIIVHYNVRLLGDKSTEDPVIVQNSWT 240

Query: 234 ATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTR 293
           A+QDWG EERCP   P  NKKVD+L +CN++VG    R  + +  S  S    + R  ++
Sbjct: 241 ASQDWGAEERCPKFDPDMNKKVDDLDECNKMVGGEINRTSSTSLQSNTSRGVPVAREASK 300

Query: 294 ASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELIS 353
             +YFPFKQG+LSV TLR+G EG+QMTVDGKHITSFAFR++LEPWLVSE+RI+GD  LIS
Sbjct: 301 HEKYFPFKQGFLSVATLRVGTEGMQMTVDGKHITSFAFRDTLEPWLVSEIRITGDFRLIS 360

Query: 354 VLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPA 413
           +LASGLPTSE  + +VDLE L+S  L     LDL IGVFSTANNFKRRMAVRR WMQY  
Sbjct: 361 ILASGLPTSEESEHVVDLEALKSPTLSPLRPLDLVIGVFSTANNFKRRMAVRRTWMQYDD 420

Query: 414 VKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEV 473
           V++G VAVRFFVGLHK+ +VN ELW E +TY D+QLMPFVDYYS+I+WKT+AICIFGTEV
Sbjct: 421 VRSGRVAVRFFVGLHKSPLVNLELWNEARTYGDVQLMPFVDYYSLISWKTLAICIFGTEV 480

Query: 474 VSAKYVMKTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWP 533
            SAK++MKTDDDAFVRVDEVL SL+  N T+GL+YGLIN+D++P R+PDSKWYIS EEWP
Sbjct: 481 DSAKFIMKTDDDAFVRVDEVLLSLSMTNNTRGLIYGLINSDSQPIRNPDSKWYISYEEWP 540

Query: 534 ESSYPPWAHGPGYVVSYDIAKAVAKRHK-GHLKMFKLEDVAMGIWIAQLKKLGMQVSYIN 592
           E  YPPWAHGPGY+VS DIA++V K  K G+LKMFKLEDVAMGIWIA+L K G++  Y N
Sbjct: 541 EEKYPPWAHGPGYIVSRDIAESVGKLFKEGNLKMFKLEDVAMGIWIAELTKHGLEPHYEN 600

Query: 593 EPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKCC 632
           + R+ ++GC+D +VVAHYQSP EM CLW+K +E + + CC
Sbjct: 601 DGRIISDGCKDGYVVAHYQSPAEMTCLWRKYQETKRSLCC 640
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of N-glycans containing Lewis a structures (with the combination of FUT13).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9ASW1|B3GTG_ARATH Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1 Back     alignment and function description
>sp|Q8RX55|B3GTI_ARATH Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1 Back     alignment and function description
>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1 Back     alignment and function description
>sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2 Back     alignment and function description
>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2 Back     alignment and function description
>sp|Q9MYM7|B3GT1_PONPY Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|Q7JK26|B3GT1_PANTR Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|Q7JK25|B3GT1_PANPA Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1 Back     alignment and function description
>sp|O54904|B3GT1_MOUSE Beta-1,3-galactosyltransferase 1 OS=Mus musculus GN=B3galt1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
296082924635 unnamed protein product [Vitis vinifera] 0.998 0.998 0.726 0.0
225452833639 PREDICTED: beta-1,3-galactosyltransferas 0.998 0.992 0.720 0.0
225425664636 PREDICTED: beta-1,3-galactosyltransferas 0.998 0.996 0.702 0.0
224112259632 predicted protein [Populus trichocarpa] 0.993 0.998 0.691 0.0
357487041639 Beta-1,3-galactosyltransferase [Medicago 0.996 0.990 0.669 0.0
255562878631 transferase, transferring glycosyl group 0.988 0.995 0.658 0.0
356499817639 PREDICTED: beta-1,3-galactosyltransferas 0.993 0.987 0.658 0.0
224098882647 predicted protein [Populus trichocarpa] 0.988 0.970 0.651 0.0
356498304613 PREDICTED: beta-1,3-galactosyltransferas 0.957 0.991 0.667 0.0
255582127612 transferase, transferring glycosyl group 0.957 0.993 0.643 0.0
>gi|296082924|emb|CBI22225.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  961 bits (2483), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/636 (72%), Positives = 527/636 (82%), Gaps = 2/636 (0%)

Query: 1   MKKWFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQD 60
           MKK  GG L+G   +LLVLR+ V+++P G   +      N ++PLE  Q   PP ++  +
Sbjct: 1   MKKCAGGLLVGSLFMLLVLRYGVMKSPIGFEPIQSSFIFNVSNPLEWVQPRAPPAVQNPE 60

Query: 61  SANQVISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWD 120
           ++N+ +S DT  SGLF RRNFS EV SSL TWN MKHL  +S+GLPNA+EA REAG AW 
Sbjct: 61  NSNKSVSPDTF-SGLFSRRNFSSEVLSSLQTWNCMKHLTNHSRGLPNALEAIREAGAAWV 119

Query: 121 NLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITI 180
           NLM S  K+Q GD N SS+ + KEKQCPHFL+ +NAT  GD+ Y+LRIPCGL+QGSS+TI
Sbjct: 120 NLMVSVEKEQQGDTNESSLGQSKEKQCPHFLNKMNATELGDNSYKLRIPCGLVQGSSVTI 179

Query: 181 IGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGE 240
           IGIPNGLLG+FRIDLTGEP PGE DP ++LHYNVRLHGDK+TE+PVIVQNTWTA  DWGE
Sbjct: 180 IGIPNGLLGNFRIDLTGEPHPGEPDPSIILHYNVRLHGDKITEDPVIVQNTWTAAHDWGE 239

Query: 241 EERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPF 300
           EERCPS VP  NK VD+L QCNE+VG N+  KLT +ES  IS  S++  N+ RA +YFPF
Sbjct: 240 EERCPSTVPSSNKTVDDLIQCNEMVGKNDSNKLTASESPKISTHSTLSWNRARARRYFPF 299

Query: 301 KQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLP 360
           KQGYLSVMTLR+GEEGIQMTVDGKH TSFA+RESLEPWLVSEVRISGD++LISV+ASGLP
Sbjct: 300 KQGYLSVMTLRVGEEGIQMTVDGKHTTSFAYRESLEPWLVSEVRISGDIKLISVVASGLP 359

Query: 361 TSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVA 420
           TSE L+ IVDLE LRSVP+     +DLFIGVFSTANNFKRRMAVRR WMQY AV++GAVA
Sbjct: 360 TSEDLEHIVDLETLRSVPVRPRQPVDLFIGVFSTANNFKRRMAVRRTWMQYLAVRSGAVA 419

Query: 421 VRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVM 480
           VRFFVGLHKNQ+VNEELW E+QTY DIQLMPFVDYYS+ITWKT+AICIFGTE VSAKYVM
Sbjct: 420 VRFFVGLHKNQMVNEELWKEVQTYGDIQLMPFVDYYSLITWKTIAICIFGTEAVSAKYVM 479

Query: 481 KTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPW 540
           KTDDD+FVRVDEVLASL +  VT GLLYGLIN+DARPHRS DSKWYISPEEW   +YPPW
Sbjct: 480 KTDDDSFVRVDEVLASLKKTKVTHGLLYGLINSDARPHRSSDSKWYISPEEWAGETYPPW 539

Query: 541 AHGPGYVVSYDIAKAVAKRHK-GHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNE 599
           AHGPGYVVS DIAK V KRHK GHLKMFKLEDVAMGIWIA++KK GM+VSYI E RVYNE
Sbjct: 540 AHGPGYVVSNDIAKTVYKRHKEGHLKMFKLEDVAMGIWIAEMKKGGMEVSYIKEERVYNE 599

Query: 600 GCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR 635
           GC D +VVAHYQSPREMLCLWQKL+    AKCCG+R
Sbjct: 600 GCNDGYVVAHYQSPREMLCLWQKLQLGNGAKCCGNR 635

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225452833|ref|XP_002283624.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225425664|ref|XP_002269607.1| PREDICTED: beta-1,3-galactosyltransferase 15 [Vitis vinifera] gi|296086360|emb|CBI31949.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224112259|ref|XP_002316134.1| predicted protein [Populus trichocarpa] gi|222865174|gb|EEF02305.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357487041|ref|XP_003613808.1| Beta-1,3-galactosyltransferase [Medicago truncatula] gi|355515143|gb|AES96766.1| Beta-1,3-galactosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|255562878|ref|XP_002522444.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223538329|gb|EEF39936.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356499817|ref|XP_003518733.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Glycine max] Back     alignment and taxonomy information
>gi|224098882|ref|XP_002311304.1| predicted protein [Populus trichocarpa] gi|222851124|gb|EEE88671.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356498304|ref|XP_003517993.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Glycine max] Back     alignment and taxonomy information
>gi|255582127|ref|XP_002531858.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223528508|gb|EEF30536.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
TAIR|locus:2200660643 GALT1 "galactosyltransferase1" 0.959 0.947 0.576 5.4e-189
TAIR|locus:2081071619 AT3G06440 [Arabidopsis thalian 0.751 0.770 0.468 9.4e-114
TAIR|locus:2133094741 GALT2 "AGP galactosyltransfera 0.694 0.595 0.345 1.7e-78
TAIR|locus:2172219681 AT5G62620 [Arabidopsis thalian 0.696 0.649 0.371 2e-77
TAIR|locus:2027290672 AT1G74800 [Arabidopsis thalian 0.914 0.864 0.323 5.5e-77
TAIR|locus:2205774673 AT1G27120 [Arabidopsis thalian 0.703 0.664 0.346 2.1e-70
UNIPROTKB|E1C4T5326 B3GALT1 "Uncharacterized prote 0.382 0.745 0.281 2.3e-19
UNIPROTKB|F1N0D5326 B3GALT1 "Uncharacterized prote 0.382 0.745 0.281 5.8e-19
UNIPROTKB|F1PGN6326 B3GALT1 "Uncharacterized prote 0.382 0.745 0.281 1.9e-18
UNIPROTKB|Q9Y5Z6326 B3GALT1 "Beta-1,3-galactosyltr 0.382 0.745 0.281 1.9e-18
TAIR|locus:2200660 GALT1 "galactosyltransferase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1832 (650.0 bits), Expect = 5.4e-189, P = 5.4e-189
 Identities = 353/612 (57%), Positives = 454/612 (74%)

Query:    24 LENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQDSANQVISADTL--VSGLFLRRNF 81
             +E P+  +   V VT N+T P+E  +  +P  ++   +  + IS D +  VSGLF+ +N 
Sbjct:    29 VEKPYITAAASVVVTPNTTLPMEWLRITLPDFMKEARNTQEAISGDDIAVVSGLFVEQNV 88

Query:    82 SEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNGSSVHK 141
             S+E +  L+TWNR++ L+  +Q L N V+A +EAG+ W++L+ +    +  D+N +   K
Sbjct:    89 SKEEREPLLTWNRLESLVDNAQSLVNGVDAIKEAGIVWESLVSAVEAKKLVDVNENQTRK 148

Query:   142 VKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTP 201
              KE+ CP FLS +NAT    S  +L+IPCGL QGSSIT+IGIP+GL+G FRIDLTG+P P
Sbjct:   149 GKEELCPQFLSKMNATEADGSSLKLQIPCGLTQGSSITVIGIPDGLVGSFRIDLTGQPLP 208

Query:   202 GEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQC 261
             GE DPP+++HYNVRL GDK TE+PVIVQN+WTA+QDWG EERCP   P  NKKVD+L +C
Sbjct:   209 GEPDPPIIVHYNVRLLGDKSTEDPVIVQNSWTASQDWGAEERCPKFDPDMNKKVDDLDEC 268

Query:   262 NEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTV 321
             N++VG    R  + +  S  S    + R  ++  +YFPFKQG+LSV TLR+G EG+QMTV
Sbjct:   269 NKMVGGEINRTSSTSLQSNTSRGVPVAREASKHEKYFPFKQGFLSVATLRVGTEGMQMTV 328

Query:   322 DGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPL 381
             DGKHITSFAFR++LEPWLVSE+RI+GD  LIS+LASGLPTSE  + +VDLE L+S  L  
Sbjct:   329 DGKHITSFAFRDTLEPWLVSEIRITGDFRLISILASGLPTSEESEHVVDLEALKSPTLSP 388

Query:   382 HHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTEL 441
                LDL IGVFSTANNFKRRMAVRR WMQY  V++G VAVRFFVGLHK+ +VN ELW E 
Sbjct:   389 LRPLDLVIGVFSTANNFKRRMAVRRTWMQYDDVRSGRVAVRFFVGLHKSPLVNLELWNEA 448

Query:   442 QTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLNRAN 501
             +TY D+QLMPFVDYYS+I+WKT+AICIFGTEV SAK++MKTDDDAFVRVDEVL SL+  N
Sbjct:   449 RTYGDVQLMPFVDYYSLISWKTLAICIFGTEVDSAKFIMKTDDDAFVRVDEVLLSLSMTN 508

Query:   502 VTQGLLYGLINADARPHRSPDSKXXXXXXXXXXXXXXXXAHGPGYVVSYDIAKAVAKRHK 561
              T+GL+YGLIN+D++P R+PDSK                AHGPGY+VS DIA++V K  K
Sbjct:   509 NTRGLIYGLINSDSQPIRNPDSKWYISYEEWPEEKYPPWAHGPGYIVSRDIAESVGKLFK 568

Query:   562 -GHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLW 620
              G+LKMFKLEDVAMGIWIA+L K G++  Y N+ R+ ++GC+D +VVAHYQSP EM CLW
Sbjct:   569 EGNLKMFKLEDVAMGIWIAELTKHGLEPHYENDGRIISDGCKDGYVVAHYQSPAEMTCLW 628

Query:   621 QKLKEERLAKCC 632
             +K +E + + CC
Sbjct:   629 RKYQETKRSLCC 640
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0010488 "UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity" evidence=IDA
GO:0010493 "Lewis a epitope biosynthetic process" evidence=IMP
TAIR|locus:2081071 AT3G06440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133094 GALT2 "AGP galactosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172219 AT5G62620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027290 AT1G74800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205774 AT1G27120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N0D5 B3GALT1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PGN6 B3GALT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y5Z6 B3GALT1 "Beta-1,3-galactosyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8L7F9B3GTF_ARATH2, ., 4, ., 1, ., -0.58590.99520.9828yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 4e-35
pfam00337129 pfam00337, Gal-bind_lectin, Galactoside-binding le 1e-23
cd00070127 cd00070, GLECT, Galectin/galactose-binding lectin 2e-22
smart00908122 smart00908, Gal-bind_lectin, Galactoside-binding l 3e-20
smart00276128 smart00276, GLECT, Galectin 5e-12
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 2e-06
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score = 1165 bits (3016), Expect = 0.0
 Identities = 451/636 (70%), Positives = 530/636 (83%), Gaps = 1/636 (0%)

Query: 1   MKKWFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQD 60
           MKKW+GG L+    +LLVLR+ +L+NP GES L      N+T+PLE      PP ++  +
Sbjct: 1   MKKWYGGVLVVSLFMLLVLRYVLLKNPIGESYLQSVFPSNTTNPLEWLDPTNPPAVQNPE 60

Query: 61  SANQVISADTLVSGLFLRRNFSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWD 120
           +++QVIS DT+VS LF  RN S E Q SL+TWN +KHL+ ++Q LPN VEA +EAGVAW+
Sbjct: 61  NSSQVISTDTIVSSLFATRNISNEEQQSLLTWNHLKHLVDHAQVLPNGVEAIKEAGVAWE 120

Query: 121 NLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFGDSGYRLRIPCGLIQGSSITI 180
           +LM S  +++ G  N SS+ K KEKQCP+FL+ +NAT  GDSGY+L+IPCGL QGSSITI
Sbjct: 121 SLMASVEEEKLGYTNESSLRKSKEKQCPYFLNKMNATELGDSGYKLKIPCGLTQGSSITI 180

Query: 181 IGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGE 240
           IGIP+GLLG+FRIDLTGEP PGE DPP++LHYNVRL GDK+TE+PVIVQNTWTA  DWGE
Sbjct: 181 IGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLLGDKITEDPVIVQNTWTAAHDWGE 240

Query: 241 EERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPF 300
           EERCPSP P KNKKVD+L QCN++VG ++ R L+ +  S  S RS M +  T+A +YFPF
Sbjct: 241 EERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSLHSNGSRRSPMSQEATKARRYFPF 300

Query: 301 KQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLP 360
           KQGYLSV TLR+G EGIQMTVDGKHITSFA+RE+LEPWLVSEVRISGDL+LISVLASGLP
Sbjct: 301 KQGYLSVATLRVGTEGIQMTVDGKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLP 360

Query: 361 TSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKRRMAVRRAWMQYPAVKAGAVA 420
           TSE  + ++DLE L+S PL     LDLFIGVFSTANNFKRRMAVRR WMQY AV++GAVA
Sbjct: 361 TSEDSEHVIDLEALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVA 420

Query: 421 VRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVM 480
           VRFFVGLHKNQ+VNEELW E +TY DIQLMPFVDYYS+ITWKT+AICIFGTEVVSAKYVM
Sbjct: 421 VRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVM 480

Query: 481 KTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPW 540
           KTDDDAFVRVDEVLASL R NV+ GLLYGLIN+D++PHR+PDSKWYISPEEWPE +YPPW
Sbjct: 481 KTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPW 540

Query: 541 AHGPGYVVSYDIAKAVAKRHK-GHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNE 599
           AHGPGYVVS DIAK V KRHK G LKMFKLEDVAMGIWIA++KK G++V Y N+ R+YNE
Sbjct: 541 AHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNE 600

Query: 600 GCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR 635
           GC+D +VVAHYQSPREMLCLWQKL+E + A CCG+ 
Sbjct: 601 GCKDGYVVAHYQSPREMLCLWQKLQEGKRATCCGEW 636

Length = 636
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215865 pfam00337, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|238025 cd00070, GLECT, Galectin/galactose-binding lectin Back     alignment and domain information
>gnl|CDD|214904 smart00908, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|214596 smart00276, GLECT, Galectin Back     alignment and domain information
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 635
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
smart00276128 GLECT Galectin. Galectin - galactose-binding lecti 99.97
cd00070127 GLECT Galectin/galactose-binding lectin. This doma 99.97
PF00337133 Gal-bind_lectin: Galactoside-binding lectin; Inter 99.97
KOG3587143 consensus Galectin, galactose-binding lectin [Extr 99.94
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.71
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.48
PLN03153 537 hypothetical protein; Provisional 98.96
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.52
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 95.03
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 93.93
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 93.81
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 93.35
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 91.71
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 91.66
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 91.44
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 91.38
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 89.62
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 89.57
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 88.96
PRK11204 420 N-glycosyltransferase; Provisional 88.76
cd06423180 CESA_like CESA_like is the cellulose synthase supe 88.02
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 87.91
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 87.86
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 87.53
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 87.4
PRK14583 444 hmsR N-glycosyltransferase; Provisional 86.86
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 86.63
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 86.44
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 84.07
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 83.58
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 83.29
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 81.83
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 81.46
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 81.33
COG1215 439 Glycosyltransferases, probably involved in cell wa 80.82
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 80.61
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 80.38
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 80.05
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.8e-164  Score=1364.71  Aligned_cols=635  Identities=71%  Similarity=1.185  Sum_probs=607.5

Q ss_pred             CccccchHHHHHHHHHHHHHHhhccCCCCCcccccccccCCCCCCccccCCCCCCCCCCCCccceeeccccccccccCCC
Q 006694            1 MKKWFGGGLIGFFLVLLVLRHAVLENPFGESTLFVPVTINSTDPLESHQDAVPPTIEPQDSANQVISADTLVSGLFLRRN   80 (635)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (635)
                      ||||+||++|++|||+|+|||.++++|.++++.+.++..|+|+||+|+.++.+|++++|++++++++.++++|+||+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (636)
T PLN03133          1 MKKWYGGVLVVSLFMLLVLRYVLLKNPIGESYLQSVFPSNTTNPLEWLDPTNPPAVQNPENSSQVISTDTIVSSLFATRN   80 (636)
T ss_pred             CceeeeeehHHHHHHHHHHHHHHhcCCCCCCCcccccccccCCchhhcccCCCccccCCCccceeeccccchhhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCcCCcCCccccccCCCCcc
Q 006694           81 FSEEVQSSLMTWNRMKHLIKYSQGLPNAVEAFREAGVAWDNLMDSFGKDQHGDLNGSSVHKVKEKQCPHFLSNINATGFG  160 (635)
Q Consensus        81 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~v~~~~~~~~~  160 (635)
                      +|+|++++|++|++||+|+++|++||+|++||+||+.||++|+++++++++++.++++..+.++++||++|+.|++++++
T Consensus        81 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~aw~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~~~~~~~~~~~  160 (636)
T PLN03133         81 ISNEEQQSLLTWNHLKHLVDHAQVLPNGVEAIKEAGVAWESLMASVEEEKLGYTNESSLRKSKEKQCPYFLNKMNATELG  160 (636)
T ss_pred             CchhhhhhhhHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCCchhhhhccccccc
Confidence            99999999999999999999999999999999999999999999999888888888877677889999999999999998


Q ss_pred             cCCeeeeeCCCCCCCcEEEEEEEeCCCCCceEEEccCCCCCCCCCCCeEEEEEeEeCCCCCCCCCEEEEeCCcCCCCCCC
Q 006694          161 DSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGE  240 (635)
Q Consensus       161 ~~p~~~~lp~gL~~Gs~ItV~G~p~~~~~~F~I~L~~~~~~~~~~~~i~LH~NpR~~~~~~~~~pvIv~Nt~~~~~~WG~  240 (635)
                      ..+|.+.|||||.+|++|||+|+|++++++|+|||+|+..++++++||||||||||++|+++++|+||||||+.+|+||.
T Consensus       161 ~~~~~~~iP~GL~~Gs~ItI~G~p~~~~~~F~InL~g~~~~g~~~~~iaLHfNpRf~gd~~t~~~vIV~NT~~~~~~WG~  240 (636)
T PLN03133        161 DSGYKLKIPCGLTQGSSITIIGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLLGDKITEDPVIVQNTWTAAHDWGE  240 (636)
T ss_pred             CCceEEecCCcCCCCCEEEEEEEeCCCCCeEEEEEeecCcCCCCCCCEEEEEcCccCCCccccCCEEEeCCCcCCCcccH
Confidence            89999999999999999999999999999999999999887877889999999999999999999999999994489999


Q ss_pred             ceecCCCCCCCCccccchhhhhhhccCCccccccCCccccccccccccccccccCcCCCCCCCcEEEEEEEeeCceEEEE
Q 006694          241 EERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMT  320 (635)
Q Consensus       241 EeRc~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~l~i~~~~egf~i~  320 (635)
                      ||||++|+|.++++||||++||||+|++++++++++++++..+-.+.++++++..++|||++|++|++||+||.|||||+
T Consensus       241 EERc~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~lti~~g~egf~v~  320 (636)
T PLN03133        241 EERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSLHSNGSRRSPMSQEATKARRYFPFKQGYLSVATLRVGTEGIQMT  320 (636)
T ss_pred             hhhcCCCCccccccccchhhhhhhhcccccccccccccccccccccccccccccccCCCCCCCCcEEEEEEecCCEEEEE
Confidence            99999999999999999999999999999999999877755443333488899999999999999999999999999999


Q ss_pred             ECCeEEEEEEeccCCCccceeEEEEcCcceeeeecccCCCCCcccccccCcccccCCCCCCCCCeeEEEEEecCcCcHHH
Q 006694          321 VDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTSEVLDEIVDLEDLRSVPLPLHHRLDLFIGVFSTANNFKR  400 (635)
Q Consensus       321 VnG~h~~sF~~R~~l~~~~v~~l~i~Gdv~l~sv~~~~lP~~~~~~~~~~~~~l~~p~~~~~~~~~LlI~V~Sap~~~~r  400 (635)
                      |||+|+|+|+||++++||.|++|+|+|||+|+||.+.++|+++++.++++++.|++||++++++++|+|+|+|+|+|++|
T Consensus       321 VnG~H~tsF~yR~~lep~~V~~l~V~GDv~l~SV~a~~~p~~~~~~~~~d~e~lkAppL~~~~~~~LlI~V~Sap~nf~r  400 (636)
T PLN03133        321 VDGKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLPTSEDSEHVIDLEALKSPPLSPKKPLDLFIGVFSTANNFKR  400 (636)
T ss_pred             ECCeEEEeeeCCCCCCccceeEEEEeCcEEEEEEEeeCCCCCCchhcccchHHhcCCCCCCCCceEEEEEEeCCcccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHhcCCcccCCCceEEEEEEeecCChhhHHHHHHHHhhCCCEEEeeccccCCchhHHHHHHHHhhhcccCceEEE
Q 006694          401 RMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSIITWKTVAICIFGTEVVSAKYVM  480 (635)
Q Consensus       401 R~aIR~TW~~~~~~~~~~v~v~FvvG~~~~~~~~~~L~~Ea~~ygDII~~df~DsY~nLtlKtl~~~~~~~~~~~a~fvm  480 (635)
                      |+|||+|||+....+++.++++|++|.+.++.++..|++|+++|||||++||+|+|+|||+||+++++|+.+|++++|+|
T Consensus       401 R~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFil  480 (636)
T PLN03133        401 RMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVM  480 (636)
T ss_pred             HHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEE
Confidence            99999999998766777899999999999988999999999999999999999999999999999999999999999999


Q ss_pred             eeCCceeecHHHHHHHHHhcCCCCceEEEEeecCCCCcCCCCCCcccCCCCCCCCCCCCCCCCCceeeCHHHHHHHHHHh
Q 006694          481 KTDDDAFVRVDEVLASLNRANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRH  560 (635)
Q Consensus       481 KvDDDtfVnv~~Ll~~L~~~~~~~~ly~G~~~~~~~P~Rd~~~KwyV~~~eyp~~~YPpY~~G~GYVlSrdla~~I~~~~  560 (635)
                      |+|||+|||+++|+++|+.....+.+|+|++..++.|+|++.+|||||+++||.+.|||||+|+|||||+|+|++|+.++
T Consensus       481 K~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~eyp~~~YPpYasG~gYVlS~Dla~~L~~~s  560 (636)
T PLN03133        481 KTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRH  560 (636)
T ss_pred             EcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHHHCCCCCCCCCCCcCEEEEcHHHHHHHHHhh
Confidence            99999999999999999887777789999999999999999999999999999999999999999999999999999876


Q ss_pred             c-ccCCCCCcchhhHHHHHHHhhcCCceecccCCCcccCCCcccceEEEEcCCHHHHHHHHHHhhccCCCCCcCCC
Q 006694          561 K-GHLKMFKLEDVAMGIWIAQLKKLGMQVSYINEPRVYNEGCRDQFVVAHYQSPREMLCLWQKLKEERLAKCCGDR  635 (635)
Q Consensus       561 ~-~~~~~f~~EDV~iGi~l~~l~~~gi~v~~~~d~rf~~~~C~~~~i~~H~~sP~~M~~lW~~l~~~~~~~C~~~~  635 (635)
                      + ..+++|++||||||+|++++++.|+++.|.++.|++..+|..+++++|+++|++|.++|+++++++.++||+++
T Consensus       561 ~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~~~~C~~~~i~~H~~sP~eM~~lW~~l~~~~~~~Cc~~~  636 (636)
T PLN03133        561 KEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNEGCKDGYVVAHYQSPREMLCLWQKLQEGKRATCCGEW  636 (636)
T ss_pred             hhcccCcCChhhHhHHHHHHHhcccCCCceeeCCCcccCCcCCCCeEEEecCCHHHHHHHHHHHhccCCCCccCCC
Confidence            4 58999999999999999999999999999999999999999999999999999999999999999889999975

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00276 GLECT Galectin Back     alignment and domain information
>cd00070 GLECT Galectin/galactose-binding lectin Back     alignment and domain information
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements Back     alignment and domain information
>KOG3587 consensus Galectin, galactose-binding lectin [Extracellular structures] Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 2e-24
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 1e-22
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 4e-22
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 6e-21
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 8e-21
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 1e-20
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 4e-20
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 4e-20
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 5e-19
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 1e-18
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 2e-18
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 9e-17
1is3_A135 Congerin II; complex with lactose and MES, sugar b 2e-18
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 2e-17
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 5e-17
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 6e-17
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 1e-13
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 2e-16
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 8e-15
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 8e-14
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 1e-13
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 1e-13
2wkk_A150 Galectin-2; sugar-binding protein, secreted, cell 2e-08
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 5e-06
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 7e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
1ww7_A160 Galectin; carbohydrate recognition domain,X-RAY cr 8e-04
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
 Score = 98.9 bits (246), Expect = 2e-24
 Identities = 37/199 (18%), Positives = 63/199 (31%), Gaps = 63/199 (31%)

Query: 164 YRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTE 223
           +  R+   +  G ++ + G  N     F +DL            + LH N RL+      
Sbjct: 19  FAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGK-----SKDIALHLNPRLN------ 67

Query: 224 NPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISL 283
               V+N++   + WGEEER  +                                     
Sbjct: 68  IKAFVRNSFLQ-ESWGEEERNIT------------------------------------- 89

Query: 284 RSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEV 343
                         FPF  G    M +       ++ V+G H   +  R   E   +  +
Sbjct: 90  -------------SFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFK-ELSSIDTL 135

Query: 344 RISGDLELISVLASGLPTS 362
            I+GD+ L+ V +   P+S
Sbjct: 136 EINGDIHLLEVRSWSGPSS 154
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Length = 138 Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Length = 154 Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Length = 138 Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Length = 148 Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Length = 164 Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 164 Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Length = 159 Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Length = 144 Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} PDB: 3nv2_A* 3nv3_A* 3nv4_A* Length = 138 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Length = 135 Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Length = 142 Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Length = 134 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Length = 137 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} Length = 135 Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Length = 129 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Length = 132 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Length = 134 Back     alignment and structure
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A* Length = 150 Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Length = 164 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A Length = 160 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 100.0
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 100.0
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 100.0
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 100.0
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 100.0
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 100.0
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 100.0
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 100.0
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 100.0
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 100.0
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 100.0
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 99.98
1is3_A135 Congerin II; complex with lactose and MES, sugar b 99.98
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 99.98
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 99.97
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.97
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 99.97
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 99.97
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 99.97
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.97
2wkk_A150 Galectin-2; sugar-binding protein, secreted, cell 99.97
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.97
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.96
1ww7_A160 Galectin; carbohydrate recognition domain,X-RAY cr 99.94
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 99.94
4agr_A146 Galectin; sugar binding protein; 2.10A {Cinachyrel 99.93
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.87
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 92.54
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 91.87
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 89.16
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 87.07
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 86.28
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 81.06
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.4e-35  Score=282.36  Aligned_cols=139  Identities=27%  Similarity=0.430  Sum_probs=128.4

Q ss_pred             cCCeeeeeCCCCCCCcEEEEEEEeCCCCCceEEEccCCCCCCCCCCCeEEEEEeEeCCCCCCCCCEEEEeCCcCCCCCCC
Q 006694          161 DSGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGE  240 (635)
Q Consensus       161 ~~p~~~~lp~gL~~Gs~ItV~G~p~~~~~~F~I~L~~~~~~~~~~~~i~LH~NpR~~~~~~~~~pvIv~Nt~~~~~~WG~  240 (635)
                      .+||...|||||.+|++|+|+|+|..++++|.|||+++.     .++|+|||||||+++      +||+||+.+ |.||.
T Consensus        16 ~vPf~~~ip~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~-----~~dialHfnpRf~~~------~IV~Ns~~~-g~Wg~   83 (155)
T 2yro_A           16 SLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGK-----SKDIALHLNPRLNIK------AFVRNSFLQ-ESWGE   83 (155)
T ss_dssp             CSSEEEECSSCCCTTCEEEEEEEECTTCCCEEEEEEETT-----TTEEEEEEECCSSSC------CCEEEEECS-SCBCC
T ss_pred             ccCEeeecCCCCccCCEEEEEEEECCCCCEEEEEEecCC-----CCCEEEEEEEEcCCC------EEEEEcccC-CEecc
Confidence            489999999999999999999999999999999999963     268999999999976      799999996 89999


Q ss_pred             ceecCCCCCCCCccccchhhhhhhccCCccccccCCccccccccccccccccccCcCCCCCCCcEEEEEEEeeCceEEEE
Q 006694          241 EERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMT  320 (635)
Q Consensus       241 EeRc~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~l~i~~~~egf~i~  320 (635)
                      |||+.                                                  ..|||++|++|+|+|+++.++|+|+
T Consensus        84 EEr~~--------------------------------------------------~~fPF~~G~~F~l~I~~~~~~f~V~  113 (155)
T 2yro_A           84 EERNI--------------------------------------------------TSFPFSPGMYFEMIIYCDVREFKVA  113 (155)
T ss_dssp             CCCCC--------------------------------------------------SCCCCCTTSEEEEEEEECSSEEEEE
T ss_pred             ceeeC--------------------------------------------------CCccccCCCeEEEEEEEcCCEEEEE
Confidence            99972                                                  3469999999999999999999999


Q ss_pred             ECCeEEEEEEeccCCCccceeEEEEcCcceeeeecccCCCCC
Q 006694          321 VDGKHITSFAFRESLEPWLVSEVRISGDLELISVLASGLPTS  362 (635)
Q Consensus       321 VnG~h~~sF~~R~~l~~~~v~~l~i~Gdv~l~sv~~~~lP~~  362 (635)
                      |||+|+++|+||. .++++|+.|.|.||++|++|.+.++|++
T Consensus       114 VNg~~~~~F~hR~-~pl~~I~~l~I~Gdv~l~~V~~~~~~~~  154 (155)
T 2yro_A          114 VNGVHSLEYKHRF-KELSSIDTLEINGDIHLLEVRSWSGPSS  154 (155)
T ss_dssp             ETTEEEEEEECCC-SCGGGCCEEEEEESEEEEEEEEECCCCC
T ss_pred             ECCEEEEEecCcC-CCHHHCcEEEEeCCEEEEEEEEecCCCC
Confidence            9999999999998 1348999999999999999999999976
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A* Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Back     alignment and structure
>4agr_A Galectin; sugar binding protein; 2.10A {Cinachyrella} PDB: 4agg_A 4agv_A Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 635
d1lcla_141 b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein 1e-20
d2gala_133 b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [Ta 9e-19
d2nn8a1137 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo s 5e-17
d1is3a_134 b.29.1.3 (A:) Congerin II {Conger eel (Conger myri 9e-17
d1c1la_135 b.29.1.3 (A:) Congerin I {Conger eel (Conger myria 7e-15
d1w6na_134 b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [Ta 1e-14
d1hlca_129 b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo s 1e-10
d1ulea_150 b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprino 1e-08
d1a78a_134 b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [Ta 2e-08
d1qmja_132 b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) 4e-08
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Charcot-Leyden crystal (CLC) protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (214), Expect = 1e-20
 Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 67/191 (35%)

Query: 167 RIPCGLIQGSSITIIGIPNGLLGD---FRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTE 223
                L  GS++TI G P     +    ++D   E      +  +V H+ V         
Sbjct: 8   TEAASLSTGSTVTIKGRPLVCFLNEPYLQVDFHTEMKE---ESDIVFHFQVCFGR----- 59

Query: 224 NPVIVQNTWTATQDWGEEERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISL 283
              +V N+      W ++                                          
Sbjct: 60  --RVVMNSREY-GAWKQQVESK-------------------------------------- 78

Query: 284 RSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTVDGKHITSFAFRESLEPWLVSEV 343
                          PF+ G    +++ +  +  Q+ V+G+   +F  R  ++P  V  V
Sbjct: 79  -------------NMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHR--IKPEAVKMV 123

Query: 344 RISGDLELISV 354
           ++  D+ L   
Sbjct: 124 QVWRDISLTKF 134
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Length = 137 Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 134 Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 135 Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 134 Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Length = 129 Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Length = 150 Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Length = 134 Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 132 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
d2gala_133 Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2nn8a1137 Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606] 100.0
d1lcla_141 Charcot-Leyden crystal (CLC) protein {Human (Homo 99.97
d1is3a_134 Congerin II {Conger eel (Conger myriaster) [TaxId: 99.97
d1qmja_132 Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} 99.97
d1w6na_134 Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1hlca_129 S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId 99.97
d1c1la_135 Congerin I {Conger eel (Conger myriaster) [TaxId: 99.96
d1a78a_134 Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} 99.96
d1ulea_150 Galectin-2 {Inky cap fungus (Coprinopsis cinerea) 99.94
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 83.19
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Galectin-7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-34  Score=265.02  Aligned_cols=132  Identities=25%  Similarity=0.369  Sum_probs=122.9

Q ss_pred             CCeeeeeCCCCCCCcEEEEEEEeCCCCCceEEEccCCCCCCCCCCCeEEEEEeEeCCCCCCCCCEEEEeCCcCCCCCCCc
Q 006694          162 SGYRLRIPCGLIQGSSITIIGIPNGLLGDFRIDLTGEPTPGEADPPLVLHYNVRLHGDKVTENPVIVQNTWTATQDWGEE  241 (635)
Q Consensus       162 ~p~~~~lp~gL~~Gs~ItV~G~p~~~~~~F~I~L~~~~~~~~~~~~i~LH~NpR~~~~~~~~~pvIv~Nt~~~~~~WG~E  241 (635)
                      +||...||+||.+|++|+|.|++..++++|.|||+++..   ++++|+|||||||+++      .||+||+.+ |.||.|
T Consensus         1 vPf~~~lp~gl~~G~~i~i~G~~~~~~~~F~inl~~~~~---~~~di~~Hfn~Rf~~~------~IV~Ns~~~-g~Wg~E   70 (133)
T d2gala_           1 VPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEE---QGSDAALHFNPRLDTS------EVVFNSKEQ-GSWGRE   70 (133)
T ss_dssp             CCEEEECTTCCCTTCEEEEEEECCTTCCBEEEEEESSSS---TTCCEEEEEEEETTTT------EEEEEEEET-TEECCC
T ss_pred             CCEeeecCCCCCCCCEEEEEEEECCCCCEEEEEEEeCCC---CCCCEEEEEeeEcCCC------EEEEECCcC-CeECCc
Confidence            599999999999999999999999999999999998653   4678999999999876      799999996 899999


Q ss_pred             eecCCCCCCCCccccchhhhhhhccCCccccccCCccccccccccccccccccCcCCCCCCCcEEEEEEEeeCceEEEEE
Q 006694          242 ERCPSPVPGKNKKVDELKQCNEIVGNNEGRKLTGNESSYISLRSSMERNKTRASQYFPFKQGYLSVMTLRLGEEGIQMTV  321 (635)
Q Consensus       242 eRc~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~l~i~~~~egf~i~V  321 (635)
                      ||+                                                   ..|||.+|++|+|+|.++.++|+|+|
T Consensus        71 er~---------------------------------------------------~~~Pf~~G~~F~l~I~~~~~~f~V~v   99 (133)
T d2gala_          71 ERG---------------------------------------------------PGVPFQRGQPFEVLIIASDDGFKAVV   99 (133)
T ss_dssp             EEC---------------------------------------------------SSCCCCTTCEEEEEEEECSSEEEEEE
T ss_pred             eEE---------------------------------------------------CCCCCCCCCeeEEEEEECCCEEEEEE
Confidence            996                                                   47999999999999999999999999


Q ss_pred             CCeEEEEEEeccCCCccceeEEEEcCcceeeeecc
Q 006694          322 DGKHITSFAFRESLEPWLVSEVRISGDLELISVLA  356 (635)
Q Consensus       322 nG~h~~sF~~R~~l~~~~v~~l~i~Gdv~l~sv~~  356 (635)
                      ||+|+++|+||.  +++.|+.|.|.||++|++|..
T Consensus       100 ng~~~~~F~~R~--p~~~i~~l~i~Gdv~l~~V~i  132 (133)
T d2gala_         100 GDAQYHHFRHRL--PLARVRLVEVGGDVQLDSVRI  132 (133)
T ss_dssp             TTEEEEEEECSS--CGGGCCEEEEEESCEEEEEEE
T ss_pred             CCeeEEEecCcC--ChhhccEEEEECCEEEEEEEE
Confidence            999999999998  457999999999999999874
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure