Citrus Sinensis ID: 006740

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630---
MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKIGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHEEEEcHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHccccHHHcccccHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccHHHHHHHcccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccHHHHHHcccccccccccccccccccccccccccccccccccccc
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHccccHcccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEcccccccccccHHHHHHHHcHHHcHcccccccHHHHHHHHccccccEEEcccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHcccccccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHccHHHHHHccccccccccccccHccccccHHHcccccEEEccccccHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccHcHHHHHHHcccccccccHHHHHHHccccccccHHHHcccHHHHHHHHHHHccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHccHHHHHHccccccccccccccccccccccccccccccccEEEcccc
mafslsfssfvhPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLhvgeingqkydteeicyrtadgtcnhpsddtigsqgtffgrnmppststyglldphptVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDhledskqveltapdeeiasgcplksfkffktkgvptstpsvktgslntrtpwwdasviygnneegmKRVRtfkdgklkiggdgllehdekwipisgdiRNFWAGFTLLQALFVKEHNAVCDKlkdhypdlddekLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDlfghicgpilsglvglkkprdhgvpysltEEFASVYRMhsllpdklilrdinstksdyacppvqQEVAMKEMAGKEGERRLSKIGMEQMLVSMGhqacgavtlwnypLWMRNLVahdingedrpnpvdMAALEIYRdrergvsrYNEFRRNLlmipiskwedltdDKEVIKVLQEVygddvekmdlqvgLHAEKKIKGFAISETAFFIFLLIASRRLEADrffttnfnsktytEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAfsvwdsepnqsnyiplylrlap
MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTApdeeiasgcpLKSFKffktkgvptstpsvktgslntrtpwwdasviygnneegmkrvRTFKDGKLKIGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHdingedrpnpVDMAALEiyrdrergvsrynefrrnllmipiskwedltddKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFttnfnsktytekglewvnkteTLKDVIDRHFPEMTKKWMRCSSAfsvwdsepnqsnyiplylrlap
MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFkdgklkiggdgllEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP
*****SFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNH**********TFFG*******STYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDS**V*L******IASGCPLKSFKFFKTKGV*********GSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKIGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYAC*************************MEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLR***
***************LRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTS*PSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKIGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRL**
MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKIGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP
**FSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKIGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP
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MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKIGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query633 2.2.26 [Sep-21-2011]
Q9C9U3631 Alpha-dioxygenase 2 OS=Ar yes no 0.996 1.0 0.764 0.0
Q9SGH6639 Alpha-dioxygenase 1 OS=Ar no no 0.981 0.971 0.649 0.0
Q01603690 Peroxidase OS=Drosophila yes no 0.774 0.710 0.215 1e-17
Q9VEG6809 Chorion peroxidase OS=Dro no no 0.728 0.569 0.239 1e-16
P82600790 Chorion peroxidase OS=Aed N/A no 0.734 0.588 0.240 2e-16
P27607603 Prostaglandin G/H synthas no no 0.654 0.686 0.217 1e-15
Q4WY82 1121 Linoleate 10R-lipoxygenas yes no 0.736 0.415 0.223 2e-15
O62664600 Prostaglandin G/H synthas yes no 0.527 0.556 0.234 3e-15
P05979600 Prostaglandin G/H synthas N/A no 0.527 0.556 0.234 7e-15
P23219599 Prostaglandin G/H synthas yes no 0.447 0.472 0.247 2e-14
>sp|Q9C9U3|DOX2_ARATH Alpha-dioxygenase 2 OS=Arabidopsis thaliana GN=DOX2 PE=2 SV=1 Back     alignment and function desciption
 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/633 (76%), Positives = 552/633 (87%), Gaps = 2/633 (0%)

Query: 1   MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHL 60
           M FS S S F+HPQL  +V+KMS+FD FLFY++H++DKL LWHR PVLLG+AYLG+RRHL
Sbjct: 1   MGFSPSSSWFLHPQLHHVVSKMSYFDAFLFYIVHLVDKLGLWHRFPVLLGVAYLGLRRHL 60

Query: 61  HQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLL 120
           HQRYNL+HVG INGQ YDT+E CYRTADG CNHPSD+TIGSQG+F GRNMPPSTS YG+L
Sbjct: 61  HQRYNLVHVGPINGQGYDTDEFCYRTADGKCNHPSDNTIGSQGSFIGRNMPPSTSQYGIL 120

Query: 121 DPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIAS 180
           DPHP+VVATKLLARK+FIDNG QFN+IACSWIQFMIHDW DHLED+ Q+EL AP EE+AS
Sbjct: 121 DPHPSVVATKLLARKRFIDNGDQFNVIACSWIQFMIHDWVDHLEDTHQIELEAP-EEVAS 179

Query: 181 GCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKI 240
           GCPLKSFKF +TK VPT     K+G++NTRTPWWD SVIYGN+E GM+RVR FKDGKLKI
Sbjct: 180 GCPLKSFKFLRTKKVPTDDHH-KSGAVNTRTPWWDGSVIYGNDETGMRRVRVFKDGKLKI 238

Query: 241 GGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHA 300
            GDGLLE DE+ +PISGDIRN W+GF+LLQALFVKEHN+VCD LK+ YPD DDEKLYR A
Sbjct: 239 SGDGLLERDERGVPISGDIRNSWSGFSLLQALFVKEHNSVCDMLKERYPDFDDEKLYRTA 298

Query: 301 RLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGL 360
           RLVT+AVIAKVHTIDWT+ELLKTDTL+AGMRINWYG  GKK KD+ G   GP+ SGLVGL
Sbjct: 299 RLVTAAVIAKVHTIDWTIELLKTDTLTAGMRINWYGFFGKKVKDMVGARFGPLFSGLVGL 358

Query: 361 KKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKE 420
           KKP DHGVPYSLTEEF SVYRMH LLP+ LILRD+NS   D   P +++E+ M E+ GK+
Sbjct: 359 KKPNDHGVPYSLTEEFVSVYRMHCLLPETLILRDMNSENVDKENPAIEREIPMTELIGKK 418

Query: 421 GERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYR 480
              + SK+G EQ+LVSMGHQ+CGA+TLWNYP WMRNLVA DI+GEDRP+ +DMAALEIYR
Sbjct: 419 AGEKASKLGFEQLLVSMGHQSCGALTLWNYPNWMRNLVAQDIDGEDRPHLIDMAALEIYR 478

Query: 481 DRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKI 540
           DRERGV RYNEFR+NLLM PISKWE+LTDD+E IKVL+EVY DD+EK+DL VGLHAEKKI
Sbjct: 479 DRERGVPRYNEFRKNLLMSPISKWEELTDDEEAIKVLREVYEDDIEKLDLNVGLHAEKKI 538

Query: 541 KGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPE 600
           KGFAISETAFFIFLL+ASRRLEADRFFTTNFN KTYT++GLEWVN TETLKDVIDRHFP 
Sbjct: 539 KGFAISETAFFIFLLVASRRLEADRFFTTNFNEKTYTKEGLEWVNTTETLKDVIDRHFPR 598

Query: 601 MTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP 633
           +T +WMRCSSAFSVW S+PN  N++PLYLR AP
Sbjct: 599 LTDQWMRCSSAFSVWGSDPNPKNWVPLYLRSAP 631
Alpha-dioxygenase that catalyzes the primary oxygenation of fatty acids into oxylipins. May be involved in the senescence process.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 9EC: 9EC: .EC: -
>sp|Q9SGH6|DOX1_ARATH Alpha-dioxygenase 1 OS=Arabidopsis thaliana GN=DOX1 PE=1 SV=1 Back     alignment and function description
>sp|Q01603|PERO_DROME Peroxidase OS=Drosophila melanogaster GN=Pxd PE=2 SV=2 Back     alignment and function description
>sp|Q9VEG6|PERC_DROME Chorion peroxidase OS=Drosophila melanogaster GN=Pxt PE=2 SV=3 Back     alignment and function description
>sp|P82600|PERC_AEDAE Chorion peroxidase OS=Aedes aegypti GN=pxt PE=1 SV=3 Back     alignment and function description
>sp|P27607|PGH2_CHICK Prostaglandin G/H synthase 2 OS=Gallus gallus GN=PTGS2 PE=2 SV=1 Back     alignment and function description
>sp|Q4WY82|PPOC_ASPFU Linoleate 10R-lipoxygenase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ppoC PE=1 SV=2 Back     alignment and function description
>sp|O62664|PGH1_BOVIN Prostaglandin G/H synthase 1 OS=Bos taurus GN=PTGS1 PE=2 SV=2 Back     alignment and function description
>sp|P05979|PGH1_SHEEP Prostaglandin G/H synthase 1 OS=Ovis aries GN=PTGS1 PE=1 SV=2 Back     alignment and function description
>sp|P23219|PGH1_HUMAN Prostaglandin G/H synthase 1 OS=Homo sapiens GN=PTGS1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query633
449439119632 PREDICTED: alpha-dioxygenase 2-like [Cuc 0.996 0.998 0.814 0.0
449497505632 PREDICTED: alpha-dioxygenase 2-like [Cuc 0.996 0.998 0.814 0.0
255577350633 oxidoreductase, putative [Ricinus commun 0.996 0.996 0.816 0.0
224121214625 predicted protein [Populus trichocarpa] 0.987 1.0 0.823 0.0
225456100634 PREDICTED: prostaglandin G/H synthase 1 0.998 0.996 0.811 0.0
54400096632 alpha-dioxygenase 2 [Solanum lycopersicu 0.996 0.998 0.768 0.0
304304318632 alpha-dioxygenase 2 [Nicotiana attenuata 0.996 0.998 0.776 0.0
350537911632 alpha-dioxygenase 2 [Solanum lycopersicu 0.996 0.998 0.768 0.0
15219521631 alpha dioxygenase [Arabidopsis thaliana] 0.996 1.0 0.764 0.0
297842117631 hypothetical protein ARALYDRAFT_895230 [ 0.996 1.0 0.763 0.0
>gi|449439119|ref|XP_004137335.1| PREDICTED: alpha-dioxygenase 2-like [Cucumis sativus] Back     alignment and taxonomy information
 Score = 1111 bits (2873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/632 (81%), Positives = 576/632 (91%), Gaps = 1/632 (0%)

Query: 1   MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHL 60
           M F+L  S FVHPQL +IVAKM+  DT LFYV+H +DKL LWHRLPVLLGLAYLG+RRHL
Sbjct: 1   MGFALFSSPFVHPQLQQIVAKMTLLDTLLFYVVHFVDKLGLWHRLPVLLGLAYLGMRRHL 60

Query: 61  HQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLL 120
           HQRYNLLHVG + GQKYD ++ CYRTADG+CNHP D  +GSQGTFFGRNMPPS S YG+L
Sbjct: 61  HQRYNLLHVGSMYGQKYDHQQFCYRTADGSCNHPFDSLVGSQGTFFGRNMPPSNSPYGVL 120

Query: 121 DPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIAS 180
           DPHPTVVATKLL RKK+IDNGKQFNMIACSWIQFMIHDW DHLED+KQVELTAP EE+A+
Sbjct: 121 DPHPTVVATKLLERKKYIDNGKQFNMIACSWIQFMIHDWIDHLEDTKQVELTAP-EEVAN 179

Query: 181 GCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLKI 240
           GCPLKSFKFF TK V T +P +KTG+LNTRTPWWD SVIYGNNEEGM+RVR F+DGK+KI
Sbjct: 180 GCPLKSFKFFGTKVVSTDSPYLKTGTLNTRTPWWDGSVIYGNNEEGMRRVRAFQDGKMKI 239

Query: 241 GGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHA 300
            GDGLLEHDEK IPISGD+RN WAGF+LLQALFVKEHNAVCD LK+ YPDLDDE+LYRHA
Sbjct: 240 AGDGLLEHDEKGIPISGDVRNCWAGFSLLQALFVKEHNAVCDMLKERYPDLDDEQLYRHA 299

Query: 301 RLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGL 360
           RLVTSAVIAK+HTIDWTVELLKT+TL AGMRINWYG LGKKFKD FGHICGPILSGLVGL
Sbjct: 300 RLVTSAVIAKIHTIDWTVELLKTETLLAGMRINWYGFLGKKFKDTFGHICGPILSGLVGL 359

Query: 361 KKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKE 420
           KKPRDHG+PYSLTEEF SVYRMH LLPD L++RD+NST SDY+ PP+ +EV M+++ GK+
Sbjct: 360 KKPRDHGIPYSLTEEFVSVYRMHCLLPDTLVIRDLNSTNSDYSDPPIIEEVPMEQLVGKD 419

Query: 421 GERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYR 480
           GE+R +K+GMEQMLVSMGHQACGA++LWNYP WMR L+AHD++G+DRP+PVDMAA+EIYR
Sbjct: 420 GEKRSAKLGMEQMLVSMGHQACGALSLWNYPSWMRKLIAHDVDGDDRPDPVDMAAMEIYR 479

Query: 481 DRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKI 540
           DRERGV+RYNEFRRNLLM PISKWEDLTDD EV+  L+EVYG+DVEK+DL VGLHAEKKI
Sbjct: 480 DRERGVARYNEFRRNLLMSPISKWEDLTDDNEVVSALEEVYGNDVEKLDLLVGLHAEKKI 539

Query: 541 KGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPE 600
           KGFAISET+FFIFLLIASRRLEADRFFTTN+NSKTYTE+GLEWVNKTETLKDVIDRHFP+
Sbjct: 540 KGFAISETSFFIFLLIASRRLEADRFFTTNYNSKTYTEEGLEWVNKTETLKDVIDRHFPD 599

Query: 601 MTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLA 632
           MTK+WMRCSSAFSVWDS PN +NYIPLYLR A
Sbjct: 600 MTKRWMRCSSAFSVWDSLPNPTNYIPLYLRPA 631

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449497505|ref|XP_004160421.1| PREDICTED: alpha-dioxygenase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255577350|ref|XP_002529555.1| oxidoreductase, putative [Ricinus communis] gi|223530967|gb|EEF32824.1| oxidoreductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224121214|ref|XP_002318527.1| predicted protein [Populus trichocarpa] gi|222859200|gb|EEE96747.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225456100|ref|XP_002281357.1| PREDICTED: prostaglandin G/H synthase 1 [Vitis vinifera] gi|297734294|emb|CBI15541.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|54400096|emb|CAH64542.1| alpha-dioxygenase 2 [Solanum lycopersicum] gi|266631441|emb|CAZ68079.1| alpha-dioxygenase 2 enzyme [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|304304318|gb|ADM21465.1| alpha-dioxygenase 2 [Nicotiana attenuata] Back     alignment and taxonomy information
>gi|350537911|ref|NP_001234061.1| alpha-dioxygenase 2 [Solanum lycopersicum] gi|62420870|tpg|DAA01542.1| TPA_exp: alpha-dioxygenase 3 [Lycopersicon esculentum] Back     alignment and taxonomy information
>gi|15219521|ref|NP_177509.1| alpha dioxygenase [Arabidopsis thaliana] gi|75308928|sp|Q9C9U3.1|DOX2_ARATH RecName: Full=Alpha-dioxygenase 2; Short=Alpha DOX2; AltName: Full=Fatty acid dioxygenase AlphaDOX2; Flags: Precursor gi|12324212|gb|AAG52078.1|AC012679_16 feebly-like protein; 35361-32165 [Arabidopsis thaliana] gi|19698873|gb|AAL91172.1| feebly-like protein [Arabidopsis thaliana] gi|22136130|gb|AAM91143.1| feebly-like protein [Arabidopsis thaliana] gi|332197375|gb|AEE35496.1| alpha dioxygenase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297842117|ref|XP_002888940.1| hypothetical protein ARALYDRAFT_895230 [Arabidopsis lyrata subsp. lyrata] gi|297334781|gb|EFH65199.1| hypothetical protein ARALYDRAFT_895230 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query633
TAIR|locus:2096697639 DOX1 [Arabidopsis thaliana (ta 0.981 0.971 0.633 6.4e-218
FB|FBgn0004577690 Pxd "Peroxidase" [Drosophila m 0.238 0.218 0.264 3.6e-14
UNIPROTKB|P27607603 PTGS2 "Prostaglandin G/H synth 0.203 0.213 0.291 1.5e-12
DICTYBASE|DDB_G0277275531 poxA "animal heme peroxidase f 0.219 0.261 0.271 1.6e-12
FB|FBgn0032685 1394 CG10211 [Drosophila melanogast 0.222 0.101 0.315 2e-12
FB|FBgn0261987809 Pxt "Peroxinectin-like" [Droso 0.221 0.173 0.276 2.9e-12
FB|FBgn0011828 1527 Pxn "Peroxidasin" [Drosophila 0.202 0.083 0.271 7.9e-12
ZFIN|ZDB-GENE-041014-323606 ptgs2b "prostaglandin-endopero 0.129 0.135 0.303 2.2e-11
UNIPROTKB|E1C0J7 1411 PXDNL "Uncharacterized protein 0.214 0.096 0.267 7.5e-11
UNIPROTKB|P82600790 pxt "Chorion peroxidase" [Aede 0.194 0.155 0.303 7.7e-11
TAIR|locus:2096697 DOX1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2105 (746.1 bits), Expect = 6.4e-218, P = 6.4e-218
 Identities = 395/624 (63%), Positives = 479/624 (76%)

Query:    10 FVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHV 69
             F+H     I A+MS  D FL  ++H +DK+  WH+LPV LGL YL +RRHLHQ+YNLL+V
Sbjct:    15 FIHKDFHEIYARMSLLDRFLLLIVHGVDKMVPWHKLPVFLGLTYLEVRRHLHQQYNLLNV 74

Query:    70 GEI-NGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVA 128
             G+   G ++D     YRTADG  N P ++ +GSQ +FFGRN PP      L  P P VVA
Sbjct:    75 GQTPTGIRFDPANYPYRTADGKFNDPFNEGVGSQNSFFGRNCPPVDQKSKLRRPDPMVVA 134

Query:   129 TKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFK 188
             TKLL RKKFID GKQFNMIA SWIQFMIHDW DHLED+ Q+EL AP +E+AS CPL SF+
Sbjct:   135 TKLLGRKKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTHQIELVAP-KEVASKCPLSSFR 193

Query:   189 FFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFXXXXXXXXXXXXXE- 247
             F KTK VPT    +KTGS N RTPWWD+SVIYG+N + + RVRT+               
Sbjct:   194 FLKTKEVPTGFFEIKTGSQNIRTPWWDSSVIYGSNSKTLDRVRTYKDGKLKISEETGLLL 253

Query:   248 HDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAV 307
             HDE  + ISGDIRN WAG + LQALF+KEHNAVCD LKD   DL+DE LYR+ARLVTSAV
Sbjct:   254 HDEDGLAISGDIRNSWAGVSALQALFIKEHNAVCDALKDEDDDLEDEDLYRYARLVTSAV 313

Query:   308 IAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHG 367
             +AK+HTIDWTV+LLKTDTL AGMR NWYGLLGKKFKD FGH    IL G+VG+KKP++HG
Sbjct:   314 VAKIHTIDWTVQLLKTDTLLAGMRANWYGLLGKKFKDSFGHAGSSILGGVVGMKKPQNHG 373

Query:   368 VPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSK 427
             VPYSLTE+F SVYRMHSLLPD+L + DI+         P+ QE++M+++ G++GE  +S 
Sbjct:   374 VPYSLTEDFTSVYRMHSLLPDQLHILDIDDVPGTNKSLPLIQEISMRDLIGRKGEETMSH 433

Query:   428 IGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVS 487
             IG  +++VSMGHQA GA+ L NYP+W+R++V HD NG+ RP+ VD+AALEIYRDRER V 
Sbjct:   434 IGFTKLMVSMGHQASGALELMNYPMWLRDIVPHDPNGQARPDHVDLAALEIYRDRERSVP 493

Query:   488 RYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISE 547
             RYNEFRR++ MIPI+KWEDLT+D+E I+VL +VY  DVE++DL VGL AEKKIKGFAISE
Sbjct:   494 RYNEFRRSMFMIPITKWEDLTEDEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISE 553

Query:   548 TAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMR 607
             TAF+IFL++A+RRLEADRFFT++FN   YT+KGLEWVN TE+LKDVIDRH+P+MT KWM 
Sbjct:   554 TAFYIFLIMATRRLEADRFFTSDFNETIYTKKGLEWVNTTESLKDVIDRHYPDMTDKWMN 613

Query:   608 CSSAFSVWDSEPNQSNYIPLYLRL 631
               SAFSVWDS P   N IPLYLR+
Sbjct:   614 SESAFSVWDSPPLTKNPIPLYLRI 637
GO:0004601 "peroxidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0020037 "heme binding" evidence=IEA
GO:0051707 "response to other organism" evidence=ISS
GO:0001561 "fatty acid alpha-oxidation" evidence=IDA
GO:0016165 "lipoxygenase activity" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IMP
GO:0008219 "cell death" evidence=IEP
GO:0034614 "cellular response to reactive oxygen species" evidence=IEP
GO:0042742 "defense response to bacterium" evidence=IEP
GO:0071446 "cellular response to salicylic acid stimulus" evidence=IEP
GO:0071732 "cellular response to nitric oxide" evidence=IEP
GO:0006629 "lipid metabolic process" evidence=TAS
GO:0009751 "response to salicylic acid stimulus" evidence=IEP
GO:0009627 "systemic acquired resistance" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0006826 "iron ion transport" evidence=RCA
GO:0009830 "cell wall modification involved in abscission" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
FB|FBgn0004577 Pxd "Peroxidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P27607 PTGS2 "Prostaglandin G/H synthase 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277275 poxA "animal heme peroxidase family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0032685 CG10211 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0261987 Pxt "Peroxinectin-like" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0011828 Pxn "Peroxidasin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041014-323 ptgs2b "prostaglandin-endoperoxide synthase 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0J7 PXDNL "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P82600 pxt "Chorion peroxidase" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C9U3DOX2_ARATH1, ., 1, 4, ., 9, 9, ., -0.76460.99681.0yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.11.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query633
PLN02283633 PLN02283, PLN02283, alpha-dioxygenase 0.0
cd09818484 cd09818, PIOX_like, Animal heme oxidases similar t 0.0
pfam03098521 pfam03098, An_peroxidase, Animal haem peroxidase 1e-157
cd05396370 cd05396, An_peroxidase_like, Animal heme peroxidas 3e-82
cd09816490 cd09816, prostaglandin_endoperoxide_synthase, Anim 5e-36
cd09822420 cd09822, peroxinectin_like_bacterial, Uncharacteri 4e-35
cd09823378 cd09823, peroxinectin_like, peroxinectin_like anim 1e-30
cd09820558 cd09820, dual_peroxidase_like, Dual oxidase and re 3e-09
cd09820558 cd09820, dual_peroxidase_like, Dual oxidase and re 4e-09
cd09826440 cd09826, peroxidasin_like, Animal heme peroxidase 8e-09
cd09817550 cd09817, linoleate_diol_synthase_like, Linoleate ( 6e-07
cd09817550 cd09817, linoleate_diol_synthase_like, Linoleate ( 1e-06
cd09826440 cd09826, peroxidasin_like, Animal heme peroxidase 2e-06
cd09824411 cd09824, myeloperoxidase_like, Myeloperoxidases, e 7e-05
>gnl|CDD|177921 PLN02283, PLN02283, alpha-dioxygenase Back     alignment and domain information 
 Score = 1268 bits (3283), Expect = 0.0
 Identities = 487/634 (76%), Positives = 545/634 (85%), Gaps = 2/634 (0%)

Query: 1   MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHL 60
           M FS S S F+HP L  +V+KMS FD FLF ++H +DKL LWHRLPV LGLAYL +RRHL
Sbjct: 1   MLFSASLSWFIHPDLHEVVSKMSLFDRFLFLIVHFVDKLGLWHRLPVFLGLAYLALRRHL 60

Query: 61  HQRYNLLHVGEI-NGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGL 119
           HQRYNLL+VG+  NGQ+YD  E  YRTADG CN P ++  GSQGTFFGRNMPP      L
Sbjct: 61  HQRYNLLNVGQTPNGQRYDPAEYPYRTADGKCNDPFNEGAGSQGTFFGRNMPPVDQKDKL 120

Query: 120 LDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIA 179
           LDPHP+VVATKLLARKKFID GKQFNMIA SWIQFMIHDW DHLED++Q+ELTAP +E+A
Sbjct: 121 LDPHPSVVATKLLARKKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTQQIELTAP-KEVA 179

Query: 180 SGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLK 239
           S CPLKSFKF+KTK VPT +P +KTGSLN RTPWWD SVIYG+NE+G++RVRTFKDGKLK
Sbjct: 180 SQCPLKSFKFYKTKEVPTGSPDIKTGSLNIRTPWWDGSVIYGSNEKGLRRVRTFKDGKLK 239

Query: 240 IGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRH 299
           I  DGLL HDE  IPISGD+RN WAG +LLQALFVKEHNAVCD LK+ YPD DDE+LYRH
Sbjct: 240 ISEDGLLLHDEDGIPISGDVRNSWAGVSLLQALFVKEHNAVCDALKEEYPDFDDEELYRH 299

Query: 300 ARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVG 359
           ARLVTSAVIAK+HTIDWTVELLKTDTL AGMR NWYGLLGKKFKD FGHI GPILSGLVG
Sbjct: 300 ARLVTSAVIAKIHTIDWTVELLKTDTLLAGMRANWYGLLGKKFKDTFGHIGGPILSGLVG 359

Query: 360 LKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGK 419
           LKKP +HGVPYSLTEEF SVYRMHSLLPD LILRDI +   +   PP+ +E+ M E+ G 
Sbjct: 360 LKKPNNHGVPYSLTEEFTSVYRMHSLLPDHLILRDITAAPGENKSPPLIEEIPMPELIGL 419

Query: 420 EGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIY 479
           +GE++LSKIG E+++VSMGHQACGA+ LWNYP WMR+LV  DI+GEDRP+ VDMAALEIY
Sbjct: 420 KGEKKLSKIGFEKLMVSMGHQACGALELWNYPSWMRDLVPQDIDGEDRPDHVDMAALEIY 479

Query: 480 RDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKK 539
           RDRERGV+RYNEFRRNLLMIPISKWEDLTDD+E I+VL+EVYGDDVEK+DL VGL AEKK
Sbjct: 480 RDRERGVARYNEFRRNLLMIPISKWEDLTDDEEAIEVLREVYGDDVEKLDLLVGLMAEKK 539

Query: 540 IKGFAISETAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFP 599
           IKGFAISETAFFIFLL+ASRRLEADRFFT+NFN KTYT+KGLEWVN TE+LKDVIDRH+P
Sbjct: 540 IKGFAISETAFFIFLLMASRRLEADRFFTSNFNEKTYTKKGLEWVNTTESLKDVIDRHYP 599

Query: 600 EMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP 633
           EMT KWM  SSAFSVWDS PN  N+IPLYLR  P
Sbjct: 600 EMTDKWMNSSSAFSVWDSPPNPHNWIPLYLRPPP 633

Length = 633
>gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases Back     alignment and domain information
>gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase Back     alignment and domain information
>gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins Back     alignment and domain information
>gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin endoperoxide synthase and related bacterial proteins Back     alignment and domain information
>gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial Back     alignment and domain information
>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases Back     alignment and domain information
>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases Back     alignment and domain information
>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases Back     alignment and domain information
>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins Back     alignment and domain information
>gnl|CDD|188649 cd09817, linoleate_diol_synthase_like, Linoleate (8R)-dioxygenase and related enzymes Back     alignment and domain information
>gnl|CDD|188649 cd09817, linoleate_diol_synthase_like, Linoleate (8R)-dioxygenase and related enzymes Back     alignment and domain information
>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins Back     alignment and domain information
>gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 633
PLN02283633 alpha-dioxygenase 100.0
KOG2408719 consensus Peroxidase/oxygenase [General function p 100.0
PF03098530 An_peroxidase: Animal haem peroxidase; InterPro: I 100.0
>PLN02283 alpha-dioxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.2e-172  Score=1444.68  Aligned_cols=632  Identities=77%  Similarity=1.283  Sum_probs=594.2

Q ss_pred             CCccccCcccccchhHHHhhhhhhHHHHHHHHHHhhcccccccccchhHHHHHhHHHHHHHhhccccccc-ccCCCCCCC
Q 006740            1 MAFSLSFSSFVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHVG-EINGQKYDT   79 (633)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~lp~~~g~~~l~~~r~~~~~~nl~d~~-~~~~~~~~~   79 (633)
                      |+||+++++|||||||++|+||+++++++++++|+|||+++|||||++||+++|..+|++||+|||+|++ .|.+..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~p~~~~~~~l~~~r~~~~~~nl~~~~~~~~~~~~~~   80 (633)
T PLN02283          1 MLFSASLSWFIHPDLHEVVSKMSLFDRFLFLIVHFVDKLGLWHRLPVFLGLAYLALRRHLHQRYNLLNVGQTPNGQRYDP   80 (633)
T ss_pred             CccccccchhccHHHHHHHhhccHHHHHHHHHHHHHhhcCchhhccHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCC
Confidence            7899999999999999999999999999999999999999999999999999999999999999999998 478888999


Q ss_pred             CCCcccCCccCcCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCChhHHHHHhhhcccccCCCCCchHHHHHHHHHHhhhh
Q 006740           80 EEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFMIHDW  159 (633)
Q Consensus        80 ~~~~yRt~DGscNNl~~P~~G~a~t~f~R~lpp~~~~~g~~lP~pR~VS~~l~~~~~~~~~~~~~n~l~~~wgQfi~HD~  159 (633)
                      ..++|||+||+|||+.||.||+|||+|+|++||.++.++..+|+||+||++|++|+.|++++.++|+|+++|||||+|||
T Consensus        81 ~~~~yRt~DGscNNl~~P~~G~agt~f~R~v~p~~~~~~~~~P~pr~vs~~ll~r~~f~~~~~~~n~~~~~w~Qf~~HD~  160 (633)
T PLN02283         81 AEYPYRTADGKCNDPFNEGAGSQGTFFGRNMPPVDQKDKLLDPHPSVVATKLLARKKFIDTGKQFNMIAASWIQFMIHDW  160 (633)
T ss_pred             ccccccCCCCCCcCCCCcccccCCCccccCCCccccCCCCCCCCHHHHHHHHHhhccccCCCCcchHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999987888988999999999999999998777899999999999999999


Q ss_pred             ccCCCCCCcceeccCCCCCCCCCCCCccccccccCCCCCCCCCCCCCccCCCCccccccCCCCCHHhhhhhccCCCCccc
Q 006740          160 TDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFKDGKLK  239 (633)
Q Consensus       160 ~~~~~~~~~~~i~iP~~~~~~~cp~~~~~~~Rt~~~~~~~~~~~~~~~N~~T~~lD~S~IYGss~~~~~~LR~~~~GkL~  239 (633)
                      ++|.+++.+.+|.+|+ +.++.||.+||+|+||..+|++.++++++|+|++|||||||+||||+++++++||++++||||
T Consensus       161 ~~~~~~~~~~~i~~p~-~~~~~~~~~~~~f~RT~~~~~~~~~~~~~qiN~~Ts~lD~S~IYGss~~~~~~LRtf~~GkLk  239 (633)
T PLN02283        161 IDHLEDTQQIELTAPK-EVASQCPLKSFKFYKTKEVPTGSPDIKTGSLNIRTPWWDGSVIYGSNEKGLRRVRTFKDGKLK  239 (633)
T ss_pred             hhhcCccccccccCCc-ccccCCcccccccccCCCCCCCCCCCCccccccccceeecccccCCCHHHHHhhhCCCCCccC
Confidence            9998877778899997 678999999999999998877665557799999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCcccchhHHHHHHHHhhhhhHHHHHHHhhCCCCChHHHHHHHHHHHHHhhceeeeehhhHh
Q 006740          240 IGGDGLLEHDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVE  319 (633)
Q Consensus       240 ~~~~G~lP~~~~g~~~aGD~RN~~~gL~~lhtlf~REHNria~~L~~~nP~W~DE~LFqeAR~Iv~A~~Q~I~~~E~lP~  319 (633)
                      ++.+|++|.+..+|+++||.||+||||++|||||+|||||||++|+++||+|+||+||||||+||||+||||||+||||+
T Consensus       240 ~~~~~~l~~~~~~~~~~Gd~rn~~pGL~~lhtLF~REHNrIad~L~~~nP~w~DE~LFQeAR~Iv~A~~q~I~~~EylP~  319 (633)
T PLN02283        240 ISEDGLLLHDEDGIPISGDVRNSWAGVSLLQALFVKEHNAVCDALKEEYPDFDDEELYRHARLVTSAVIAKIHTIDWTVE  319 (633)
T ss_pred             cCCCCCCCCCccCCcccCccccccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHheeeeeeeccHH
Confidence            99889999988899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccccccccccccccccccccccCCcccccccCCCCCCCCCCCCCCCcchhhhHHhhhhhccCCCceeeccccCcC
Q 006740          320 LLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRMHSLLPDKLILRDINSTK  399 (633)
Q Consensus       320 iLg~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~G~~~~~~~~v~~sis~EFaaayR~Hslip~~~~~~d~~~~~  399 (633)
                      |||++++.++|++||||++|+++++.+|+...+.++||.||+.+++++++++|++||++||||||+||+.+.+++.....
T Consensus       320 iLg~~~~~~~~~~~w~gllg~~~~~~~g~~~~~~~~g~~gy~~~~~~~v~~~is~EF~aaYR~Hslip~~~~~~~~~~~~  399 (633)
T PLN02283        320 LLKTDTLLAGMRANWYGLLGKKFKDTFGHIGGPILSGLVGLKKPNNHGVPYSLTEEFTSVYRMHSLLPDHLILRDITAAP  399 (633)
T ss_pred             hcCCcccccccccccccccchhhhhhcccccccccccccCCCccccCCCCcchhHHHHHHHhhhhcCCCceecccccccc
Confidence            99999999999999999999999999999866778999999888999999999999999999999999999987754322


Q ss_pred             CCCCCCCccccccHHHHhccccccccccccHHHHHHHhhhcccccccccCchHHHHhhhhccCCCCCCCCchhHHHHHHH
Q 006740          400 SDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIY  479 (633)
Q Consensus       400 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~l~~~~~q~~~~i~~~~~~~~lr~~~~~~~~G~~~~~~~DL~alnIq  479 (633)
                      ....+++..+.+++.++++..+...+.+.|++++++|++.|++|+++++|+|.+|++++.+...|..++.++||+|+|||
T Consensus       400 ~~~~~~~~~~~~~l~d~~~~~~~~~l~~~Gl~~ll~~l~~q~aga~~l~n~p~~l~~l~~~~~~g~~~~~g~DLaal~Iq  479 (633)
T PLN02283        400 GENKSPPLIEEIPMPELIGLKGEKKLSKIGFEKLMVSMGHQACGALELWNYPSWMRDLVPQDIDGEDRPDHVDMAALEIY  479 (633)
T ss_pred             cccccccccccccHHHHHhhcccccccccCHHHHHHHHhhcchhccccccCcHHHHhhhhccccCCcccccccHHHHHHH
Confidence            22223344567899999887666666678999999999999999999999999999988666678777889999999999


Q ss_pred             HHhhcCCCcHHHHHHHhCCCCCCCCccCCCCHHHHHHHHHHhCCCCCccccchhhccccccCCCcccHHHHHHHHHHHHH
Q 006740          480 RDRERGVSRYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASR  559 (633)
Q Consensus       480 RgRDhGlp~YN~~R~~cgl~~~~sF~dl~~~~e~~~~L~~lY~~~vddVDL~vG~laE~~~~G~~vg~T~~~iii~~~~r  559 (633)
                      ||||||||+||+||++|||++++||+||+.|++++++|+++|+++|||||||||+++|++++|+++|||++|||+.||+|
T Consensus       480 RgRDhGlp~YNefR~~~gL~~~~sFedlt~d~e~~~~L~~lY~~~vddVDL~VG~laE~~v~G~~vG~T~~~i~~~~a~r  559 (633)
T PLN02283        480 RDRERGVARYNEFRRNLLMIPISKWEDLTDDEEAIEVLREVYGDDVEKLDLLVGLMAEKKIKGFAISETAFFIFLLMASR  559 (633)
T ss_pred             hhhhcCCccHHHHHHHcCCCCCCCHHHcCCCHHHHHHHHHHhCCCHHHHHhhhhheecccCCCCCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999976899999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCCCCCCCCHHHHHHHccCCcHHHHHHhhCCCCCccccccCCCcccCCCCCCCCCccccccccCC
Q 006740          560 RLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFSVWDSEPNQSNYIPLYLRLAP  633 (633)
Q Consensus       560 ~l~gDRF~ye~~~~~~fT~~ql~~I~k~~tl~~vic~n~~~~~~~~~~~~n~f~~w~~~~~~~~~~~~~~~~~~  633 (633)
                      +++||||||||++|++||++|++||++++||++|||||+|+++++|++|+|||+||+..+.+++|||||||+|+
T Consensus       560 ~~~gDRF~~en~np~~fT~~gl~~I~~t~tl~dvl~r~~p~~~~~~~~~~~~f~~w~~~~~~~~~~~~~~~~~~  633 (633)
T PLN02283        560 RLEADRFFTSNFNEKTYTKKGLEWVNTTESLKDVIDRHYPEMTDKWMNSSSAFSVWDSPPNPHNWIPLYLRPPP  633 (633)
T ss_pred             HhcCCCCeEecCCcCcCCHHHHHHHHccCcHHHHHHHhCcchhhhhhhcccCCCcCCCCCCCCCccceeeccCC
Confidence            99999999999999999999999999977999999999999999999999999999988899999999999985

>KOG2408 consensus Peroxidase/oxygenase [General function prediction only] Back     alignment and domain information
>PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query633
4hhr_A652 Crystal Structure Of Fatty Acid Alpha-dioxygenase ( 0.0
1pge_A576 Prostaglandin H2 Synthase-1 Complexed With P-(2'-Io 4e-11
1pth_A576 The Structural Basis Of Aspirin Activity Inferred F 4e-11
1cqe_A580 Prostaglandin H2 Synthase-1 Complex With Flurbiprof 4e-11
2oye_P600 Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To 5e-11
1u67_A600 Crystal Structure Of Arachidonic Acid Bound To A Mu 5e-11
1diy_A553 Crystal Structure Of Arachidonic Acid Bound In The 5e-11
3n8w_B553 Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 H 6e-11
1ht5_A551 The 2.75 Angstrom Resolution Model Of Ovine Cox-1 C 6e-11
3n8y_B553 Structure Of Aspirin Acetylated Cyclooxygenase-1 In 6e-11
1ebv_A551 Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid 6e-11
3krk_A591 X-Ray Crystal Structure Of Arachidonic Acid Bound I 1e-10
1ddx_A552 Crystal Structure Of A Mixture Of Arachidonic Acid 1e-10
3rr3_A560 Structure Of (R)-Flurbiprofen Bound To Mcox-2 Lengt 1e-10
3mdl_A587 X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol 1e-10
3nt1_A587 High Resolution Structure Of Naproxen:cox-2 Complex 1e-10
1pxx_A604 Crystal Structure Of Diclofenac Bound To The Cycloo 1e-10
3hs5_A591 X-Ray Crystal Structure Of Arachidonic Acid Bound T 1e-10
3olt_A592 X-Ray Crystal Structure Of Arachidonic Acid Bound T 1e-10
3tzi_A593 X-Ray Crystal Structure Of Arachidonic Acid Bound I 1e-10
3qh0_A610 X-Ray Crystal Structure Of Palmitic Acid Bound To T 1e-10
1prh_A554 The X-Ray Crystal Structure Of The Membrane Protein 6e-10
1cvu_A552 Crystal Structure Of Arachidonic Acid Bound To The 1e-09
3pgh_A587 Cyclooxygenase-2 (Prostaglandin Synthase-2) Complex 1e-09
1myp_C466 X-Ray Crystal Structure Of Canine Myeloperoxidase A 6e-04
3f9p_C467 Crystal Structure Of Myeloperoxidase From Human Leu 6e-04
1cxp_C466 Cryogenic Crystal Structure Of Human Myeloperoxidas 6e-04
>pdb|4HHR|A Chain A, Crystal Structure Of Fatty Acid Alpha-dioxygenase (arabidopsis Thaliana) Length = 652 Back     alignment and structure 
Iteration: 1

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/624 (63%), Positives = 479/624 (76%), Gaps = 3/624 (0%)
Query: 10  FVHPQLLRIVAKMSFFDTFLFYVIHILDKLDLWHRLPVLLGLAYLGIRRHLHQRYNLLHV 69
           F+H     I A+MS  D FL  ++H +DK+  WH+LPV LGL YL +RRHLHQ+YNLL+V
Sbjct: 27  FIHKDFHEIYARMSLLDRFLLLIVHGVDKMVPWHKLPVFLGLTYLEVRRHLHQQYNLLNV 86
Query: 70  GEI-NGQKYDTEEICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTSTYGLLDPHPTVVA 128
           G+   G ++D     YRTADG  N P ++ +GSQ +FFGRN PP      L  P P VVA
Sbjct: 87  GQTPTGIRFDPANYPYRTADGKFNDPFNEGVGSQNSFFGRNCPPVDQKSKLRRPDPMVVA 146
Query: 129 TKLLARKKFIDNGKQFNMIACSWIQFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFK 188
           TKLL RKKFID GKQFNMIA SWIQFMIHDW DHLED+ Q+EL AP +E+AS CPL SF+
Sbjct: 147 TKLLGRKKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTHQIELVAP-KEVASKCPLSSFR 205
Query: 189 FFKTKGVPTSTPSVKTGSLNTRTPWWDASVIYGNNEEGMKRVRTFX-XXXXXXXXXXXXE 247
           F KTK VPT    +KTGS N RTPWWD+SVIYG+N + + RVRT+               
Sbjct: 206 FLKTKEVPTGFFEIKTGSQNIRTPWWDSSVIYGSNSKTLDRVRTYKDGKLKISEETGLLL 265
Query: 248 HDEKWIPISGDIRNFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAV 307
           HDE  + ISGDIRN WAG + LQALF+KEHNAVCD LKD   DL+DE LYR+ARLVTSAV
Sbjct: 266 HDEDGLAISGDIRNSWAGVSALQALFIKEHNAVCDALKDEDDDLEDEDLYRYARLVTSAV 325
Query: 308 IAKVHTIDWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHG 367
           +AK+HTIDWTV+LLKTDTL AGMR NWYGLLGKKFKD FGH    IL G+VG+KKP++HG
Sbjct: 326 VAKIHTIDWTVQLLKTDTLLAGMRANWYGLLGKKFKDSFGHAGSSILGGVVGMKKPQNHG 385
Query: 368 VPYSLTEEFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSK 427
           VPYSLTE+F SVYRMHSLLPD+L + DI+         P+ QE++M+++ G++GE  +S 
Sbjct: 386 VPYSLTEDFTSVYRMHSLLPDQLHILDIDDVPGTNKSLPLIQEISMRDLIGRKGEETMSH 445
Query: 428 IGMEQMLVSMGHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVS 487
           IG  +++VSMGHQA GA+ L NYP+W+R++V HD NG+ RP+ VD+AALEIYRDRER V 
Sbjct: 446 IGFTKLMVSMGHQASGALELMNYPMWLRDIVPHDPNGQARPDHVDLAALEIYRDRERSVP 505
Query: 488 RYNEFRRNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISE 547
           RYNEFRR++ MIPI+KWEDLT+D+E I+VL +VY  DVE++DL VGL AEKKIKGFAISE
Sbjct: 506 RYNEFRRSMFMIPITKWEDLTEDEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISE 565
Query: 548 TAFFIFLLIASRRLEADRFFTTNFNSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMR 607
           TAF+IFL++A+RRLEADRFFT++FN   YT+KGLEWVN TE+LKDVIDRH+P+MT KWM 
Sbjct: 566 TAFYIFLIMATRRLEADRFFTSDFNETIYTKKGLEWVNTTESLKDVIDRHYPDMTDKWMN 625
Query: 608 CSSAFSVWDSEPNQSNYIPLYLRL 631
             SAFSVWDS P   N IPLYLR+
Sbjct: 626 SESAFSVWDSPPLTKNPIPLYLRI 649
>pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen) Length = 576 Back     alignment and structure
>pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The Crystal Structure Of Inactivated Prostaglandin H2 Synthase Length = 576 Back     alignment and structure
>pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen Length = 580 Back     alignment and structure
>pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To Cyclooxygenase-1 Length = 600 Back     alignment and structure
>pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of Prostagladin H Synthase-1 That Forms Predominantly 11-hpete Length = 600 Back     alignment and structure
>pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Active Site Of Pghs-1 Length = 553 Back     alignment and structure
>pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 Heterodimer Mutant In Complex With Flurbiprofen Length = 553 Back     alignment and structure
>pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1 Complexed With Methyl Ester Flurbiprofen Length = 551 Back     alignment and structure
>pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In Complex With Diclofenac Length = 553 Back     alignment and structure
>pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid Length = 551 Back     alignment and structure
>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of L531f Murine Cox-2 Length = 591 Back     alignment and structure
>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And Prostaglandin Bound To The Cyclooxygenase Active Site Of Cox-2: Prostaglandin Structure Length = 552 Back     alignment and structure
>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2 Length = 560 Back     alignment and structure
>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 587 Back     alignment and structure
>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex. Length = 587 Back     alignment and structure
>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 604 Back     alignment and structure
>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 591 Back     alignment and structure
>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of R513h Murine Cox-2 Length = 592 Back     alignment and structure
>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of G533v Murine Cox-2 Length = 593 Back     alignment and structure
>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 610 Back     alignment and structure
>pdb|1PRH|A Chain A, The X-Ray Crystal Structure Of The Membrane Protein Prostaglandin H2 Synthase-1 Length = 554 Back     alignment and structure
>pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 552 Back     alignment and structure
>pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With A Non- Selective Inhibitor, Flurbiprofen Length = 587 Back     alignment and structure
>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3 Angstroms Resolution Length = 466 Back     alignment and structure
>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes Length = 467 Back     alignment and structure
>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase Isoform C Length = 466 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query633
3nt1_A587 Prostaglandin-endoperoxide synthase 2; prostagland 4e-92
1q4g_A553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 3e-89
3q9k_A595 Lactoperoxidase, LPO; bovine lactoperoxidase, oxid 5e-71
1d2v_C466 Myeloperoxidase; heme-protein, oxidoreductase, per 1e-58
1d2v_A104 Myeloperoxidase; heme-protein, oxidoreductase, per 4e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587 Back     alignment and structure
 Score =  295 bits (756), Expect = 4e-92
 Identities = 117/615 (19%), Positives = 205/615 (33%), Gaps = 147/615 (23%)

Query: 41  LWHRLPVLLGLAYLGIRRHLHQRYNLLHVGEINGQKYDTEEICYRTADGTCNHPSDDTIG 100
           +W+ +  +  L  L ++  L  R  L+         Y      Y++ +   N        
Sbjct: 67  VWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYG-----YKSWEAFSNL------- 114

Query: 101 SQGTFFGRNMPPS--------TSTYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWI 152
              +++ R +PP                 P    V  K+L R++FI + +  NM+   + 
Sbjct: 115 ---SYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFA 171

Query: 153 QFMIHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTP 212
           Q   H +                              FKT            G       
Sbjct: 172 QHFTHQF------------------------------FKTDHKRG------PGFTRGLGH 195

Query: 213 WWDASVIYGNNEEGMKRVRTFKDGKLKIGGDGLLEH-----------------DEKWIPI 255
             D + IYG   +   ++R FKDGKLK    G   +                  E     
Sbjct: 196 GVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFA 255

Query: 256 SGDIR-NFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTI 314
            G        G  +   ++++EHN VCD LK  +P+  DE+L++ +RL+      K+   
Sbjct: 256 VGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIE 315

Query: 315 DWTVELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTE 374
           D+                    L G  FK  F             L   +       +  
Sbjct: 316 DY-----------------VQHLSGYHFKLKFDP----------ELLFNQQFQYQNRIAS 348

Query: 375 EFASVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQML 434
           EF ++Y  H LLPD   + D   +   +                      L + G+ Q +
Sbjct: 349 EFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNN----------------SILLEHGLTQFV 392

Query: 435 VSMGHQACGAVTLW-NYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFR 493
            S   Q  G V    N P+ ++                 +A   I + RE      NE+R
Sbjct: 393 ESFTRQIAGRVAGGRNVPIAVQ----------------AVAKASIDQSREMKYQSLNEYR 436

Query: 494 RNLLMIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIF 553
           +   + P + +E+LT +KE+   L+ +Y  D++ M+L   L  EK        ET   + 
Sbjct: 437 KRFSLKPYTSFEELTGEKEMAAELKALY-SDIDVMELYPALLVEKPRPDAIFGETMVELG 495

Query: 554 LLIASRRLEADRFFTTNF--NSKTYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSA 611
              + + L  +   +  +   S    E G + +N   +++ +I  +            ++
Sbjct: 496 APFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTA-SIQSLICNNVKGCPF------TS 548

Query: 612 FSVWDSEPNQSNYIP 626
           F+V D +P ++  I 
Sbjct: 549 FNVQDPQPTKTATIN 563
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553 Back     alignment and structure
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595 Back     alignment and structure
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466 Back     alignment and structure
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A* Length = 104 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query633
3q9k_A595 Lactoperoxidase, LPO; bovine lactoperoxidase, oxid 100.0
3nt1_A587 Prostaglandin-endoperoxide synthase 2; prostagland 100.0
1q4g_A553 Prostaglandin G/H synthase 1; cyclooxygenase, non- 100.0
1d2v_C466 Myeloperoxidase; heme-protein, oxidoreductase, per 100.0
1d2v_A104 Myeloperoxidase; heme-protein, oxidoreductase, per 99.92
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Back     alignment and structure
Probab=100.00  E-value=6.5e-123  Score=1042.20  Aligned_cols=485  Identities=20%  Similarity=0.294  Sum_probs=406.6

Q ss_pred             CCcccCCccCcCCCCCCCCCCCCCCCccCCCCCCC--------------CCCCCCCChhHHHHHhhhcc-cccCCCCCch
Q 006740           81 EICYRTADGTCNHPSDDTIGSQGTFFGRNMPPSTS--------------TYGLLDPHPTVVATKLLARK-KFIDNGKQFN  145 (633)
Q Consensus        81 ~~~yRt~DGscNNl~~P~~G~a~t~f~R~lpp~~~--------------~~g~~lP~pR~VS~~l~~~~-~~~~~~~~~n  145 (633)
                      ..+|||+||+|||+.||.||+|+|+|+|++||.|.              .+|..||+||+||++|+... +...++..+|
T Consensus        18 ~~~yRt~DG~CNNl~~P~wGaa~t~f~R~lpp~Y~DGv~~Pr~~~~~~~~~g~~lP~~R~VS~~l~~~~~~~~~~~~~~t   97 (595)
T 3q9k_A           18 NSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRS   97 (595)
T ss_dssp             SCSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCHHHHHHHHTCCSCCTTCEEEEEE
T ss_pred             CCCccCCCCCccCcCCcccCCCCCCccCCCCcccccccccccccccccccCCCCCCCHHHHHHHHHhcccccCCCCCCch
Confidence            48999999999999999999999999999999853              23558999999999999632 2222577899


Q ss_pred             HHHHHHHHHHhhhhccCCCC---------------C----CcceeccCCC-CCCCCCCCCccccccccCCCCCCCC--CC
Q 006740          146 MIACSWIQFMIHDWTDHLED---------------S----KQVELTAPDE-EIASGCPLKSFKFFKTKGVPTSTPS--VK  203 (633)
Q Consensus       146 ~l~~~wgQfi~HD~~~~~~~---------------~----~~~~i~iP~~-~~~~~cp~~~~~~~Rt~~~~~~~~~--~~  203 (633)
                      +|+|+|||||+|||++++..               |    .|.+|.||.+ +.. .+...||+|+||..++.....  .+
T Consensus        98 ~~~~~wGQfi~HDi~~t~~~~~~~~~~~~~~C~~~c~~~~~C~pI~ip~~Dp~~-~~~~~Cm~f~RS~~~~~~~~~~~~~  176 (595)
T 3q9k_A           98 LLFMQWGQIVDHDLDFAPETELGSNEHSKTQCEEYCIQGDNCFPIMFPKNDPKL-KTQGKCMPFFRAGFVCPTPPYQSLA  176 (595)
T ss_dssp             HHHHHHHHHHHHHHCCCCBCCSCTTCSHHHHHHHHCCCBTTBCCEECCTTCHHH-HHSCSEECCBCBCBSSCSSCCCSSC
T ss_pred             HHHHHHHHHHHhhhhccCccccccccCCCcCccccccCCCCceeeeCCCCCCcc-cCCCceeEeecCCCcCCCCCCCcch
Confidence            99999999999999987432               1    2467888764 211 233459999999987642212  25


Q ss_pred             CCCccCCCCccccccCCCCCHHhhhhhccCCC--CcccccC----CC--CCCCCC--------------CCCCCCCCCc-
Q 006740          204 TGSLNTRTPWWDASVIYGNNEEGMKRVRTFKD--GKLKIGG----DG--LLEHDE--------------KWIPISGDIR-  260 (633)
Q Consensus       204 ~~~~N~~T~~lD~S~IYGss~~~~~~LR~~~~--GkL~~~~----~G--~lP~~~--------------~g~~~aGD~R-  260 (633)
                      ++|+|++|||||||+||||+++++++||++++  ||||++.    +|  +||.+.              ..|+++||.| 
T Consensus       177 reQiN~~Ts~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD~R~  256 (595)
T 3q9k_A          177 REQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRA  256 (595)
T ss_dssp             CCBEECSCSSSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSSCCBTTBCCCCBCCCSSCHHHHTCTTTCCCCBCCSSTTT
T ss_pred             HhhhccccceeeeeeccCCCHHHHHHHhCCCCCCceeecccccCCCCccCCCCCCCCCCcccccCCCCCCcccccCCccc
Confidence            79999999999999999999999999999998  9999875    45  888753              1278999999 


Q ss_pred             ccchhHHHHHHHHhhhhhHHHHHHHhhCCCCChHHHHHHHHHHHHHhhceeeeehhhHhhhccccccccccccccccccc
Q 006740          261 NFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWTVELLKTDTLSAGMRINWYGLLGK  340 (633)
Q Consensus       261 N~~~gL~~lhtlf~REHNria~~L~~~nP~W~DE~LFqeAR~Iv~A~~Q~I~~~E~lP~iLg~~~~~~~m~~nw~gl~g~  340 (633)
                      |++|+|++|||||+|||||||++|+++||+|+||+|||||||||+|+||||||+||||.|||.+ +.+            
T Consensus       257 ne~p~L~~lhtlflREHNria~~L~~~nP~W~dE~LfQeAR~Iv~A~~Q~Ity~E~LP~ilG~~-~~~------------  323 (595)
T 3q9k_A          257 SEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSE-MQK------------  323 (595)
T ss_dssp             TSBHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGG-HHH------------
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHeeeeeHHHHHHHHhCch-hhh------------
Confidence            9999999999999999999999999999999999999999999999999999999999999876 321            


Q ss_pred             ccccccCCcccccccCCCCCCCCCCCCCCCcchhhhHHhhhh-hccCCCceeeccccCcCCCCCCCCccccccHHHHhcc
Q 006740          341 KFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFASVYRM-HSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGK  419 (633)
Q Consensus       341 ~~~~~~g~~~~~~~~g~~G~~~~~~~~v~~sis~EFaaayR~-Hslip~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~  419 (633)
                          ..        ..|.|    |+++++|+|++||+||||| |||||+.+.+.+.+......     ...++|.+.+|+
T Consensus       324 ----~~--------~~~~g----Y~~~v~p~i~neF~aafRfgHsli~~~~~~~~~~~~~~~~-----~~~~~L~~~ff~  382 (595)
T 3q9k_A          324 ----WI--------PPYQG----YNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGP-----EAELPLHTLFFN  382 (595)
T ss_dssp             ----HS--------CSCCC----CCTTSCCCCBTTHHHHGGGGGGGCCSEEECBCTTSSBCST-----TCEEEGGGGBTC
T ss_pred             ----hC--------CCccC----CCCCCCCccHHHHHHHHHhHHhhCcchhhccCccccccCC-----CCceeHHHHhcC
Confidence                01        12334    6778999999999889999 99999999985543221111     137899999998


Q ss_pred             ccccccccccHHHHHHHhhhccccccc-ccCchHHHHhhhhccCCCCCCCCchhHHHHHHHHHhhcCCCcHHHHHHHhCC
Q 006740          420 EGERRLSKIGMEQMLVSMGHQACGAVT-LWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLLM  498 (633)
Q Consensus       420 ~~~~~~~~~g~~~~l~~~~~q~~~~i~-~~~~~~~lr~~~~~~~~G~~~~~~~DL~alnIqRgRDhGlp~YN~~R~~cgl  498 (633)
                      +.. .+.+.|++.+++||..|+++.+. +++++++|++.+|... +  ...++||+|+|||||||||||+||+||++|||
T Consensus       383 ~~~-~~~~~gid~llrGl~~q~a~~~~~d~~~~~~l~~~Lf~~~-~--~~~g~DL~alnIqRgRdhGlp~yn~~R~~~gl  458 (595)
T 3q9k_A          383 TWR-IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPT-H--KIHGFDLAAINLQRCRDHGMPGYNSWRGFCGL  458 (595)
T ss_dssp             CHH-HHTTTCSHHHHHHHHHSEEECCCTTSCSCHHHHTCEECTT-S--CSEEECHHHHHHHHHHHTTCCCHHHHHHHTTC
T ss_pred             hHH-hhhccchHHHHHHHhhCcccccCCCccCCHHHHHHhccCC-C--ccccccHHHHHHHHHHHhCCCCHHHHHHHcCC
Confidence            763 34567899999999999998432 3578999998775422 1  12389999999999999999999999999999


Q ss_pred             CCCCCCccCC---CCHHHHHHHHHHhCCCCCccccchhhccccccCCCcccHHHHHHHHHHHHHhh-ccCCCCCCCCCCC
Q 006740          499 IPISKWEDLT---DDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIASRRL-EADRFFTTNFNSK  574 (633)
Q Consensus       499 ~~~~sF~dl~---~~~e~~~~L~~lY~~~vddVDL~vG~laE~~~~G~~vg~T~~~iii~~~~r~l-~gDRF~ye~~~~~  574 (633)
                      +++++|+||+   .+++++++|+++|+ +|||||||||+++|++++|+++|||+.||| ++||+++ +|||||||  |++
T Consensus       459 ~~~~sf~dl~~~~~~~~~~~~l~~lY~-~~d~iDl~vG~l~E~~~~g~~~Gptf~~ii-~~qf~~lr~gDRf~ye--n~~  534 (595)
T 3q9k_A          459 SQPKTLKGLQTVLKNKILAKKLMDLYK-TPDNIDIWIGGNAEPMVERGRVGPLLACLL-GRQFQQIRDGDRFWWE--NPG  534 (595)
T ss_dssp             CCCCSHHHHHHHHTCHHHHHHHHHHHS-SGGGSCHHHHHHHSCCCTTBSSCHHHHHHH-HHHHHHHHHTCTTCTT--SBT
T ss_pred             CCCCCHHHHhhhcCcHHHHHHHHHHhC-CccccceeecccccccCCCCCcCHHHHHHH-HHHHHHHHhcCCCeec--CCC
Confidence            9999999999   79999999999999 999999999999999999999999988885 6777777 89999999  578


Q ss_pred             CCCHHHHHHHccCCcHHHHHHhhCCCCCccccccCCCcc
Q 006740          575 TYTEKGLEWVNKTETLKDVIDRHFPEMTKKWMRCSSAFS  613 (633)
Q Consensus       575 ~fT~~ql~~I~k~~tl~~vic~n~~~~~~~~~~~~n~f~  613 (633)
                      +||++||+||+|+ ||++|||+| ++|+.   .+.+||.
T Consensus       535 ~ft~~ql~ei~~~-sla~iic~n-~~i~~---vq~~~F~  568 (595)
T 3q9k_A          535 VFTEKQRDSLQKV-SFSRLICDN-THITK---VPLHAFQ  568 (595)
T ss_dssp             TBCHHHHHHHTTC-CHHHHHHHH-SSCCE---EESSTTS
T ss_pred             cCCHHHHHHHHhC-CHHHHHhcC-CCccc---ccHhhcc
Confidence            9999999999999 999999999 57764   4567776
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... Back     alignment and structure
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Back     alignment and structure
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Back     alignment and structure
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 633
d1q4ga1511 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She 3e-88
d1cvua1511 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou 1e-83
g1cxp.1570 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi 2e-77
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  281 bits (721), Expect = 3e-88
 Identities = 100/528 (18%), Positives = 179/528 (33%), Gaps = 124/528 (23%)

Query: 104 TFFGRNMPPST--------STYGLLDPHPTVVATKLLARKKFIDNGKQFNMIACSWIQFM 155
           +++ R +P           +      P    ++ + L R+KFI + +  N++   + Q  
Sbjct: 73  SYYTRILPSVPRDCPTPMGTKGKKQLPDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQHF 132

Query: 156 IHDWTDHLEDSKQVELTAPDEEIASGCPLKSFKFFKTKGVPTSTPSVKTGSLNTRTPWWD 215
            H +                              FKT      +  +  G         D
Sbjct: 133 THQF------------------------------FKT------SGKMGPGFTKALGHGVD 156

Query: 216 ASVIYGNNEEGMKRVRTFKDGKLKIGGDG------------LLEHDEKWIP-----ISGD 258
              IYG+N E   ++R FKDGKLK                 +L H  + IP       G 
Sbjct: 157 LGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQ 216

Query: 259 IR-NFWAGFTLLQALFVKEHNAVCDKLKDHYPDLDDEKLYRHARLVTSAVIAKVHTIDWT 317
                  G  L   ++++EHN VCD LK  +P   DE+L++ ARL+      K+   ++ 
Sbjct: 217 EVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYV 276

Query: 318 VELLKTDTLSAGMRINWYGLLGKKFKDLFGHICGPILSGLVGLKKPRDHGVPYSLTEEFA 377
            +L         ++ +   L G                                +  EF 
Sbjct: 277 QQLSGYFL---QLKFDPELLFGA------------------------QFQYRNRIAMEFN 309

Query: 378 SVYRMHSLLPDKLILRDINSTKSDYACPPVQQEVAMKEMAGKEGERRLSKIGMEQMLVSM 437
            +Y  H L+PD   +   + +   +                      L   G+E ++ + 
Sbjct: 310 QLYHWHPLMPDSFRVGPQDYSYEQFLFNT----------------SMLVDYGVEALVDAF 353

Query: 438 GHQACGAVTLWNYPLWMRNLVAHDINGEDRPNPVDMAALEIYRDRERGVSRYNEFRRNLL 497
             Q  G +         RN+  H          + +A   I   R   +  +NE+R+   
Sbjct: 354 SRQPAGRIG------GGRNIDHH---------ILHVAVDVIKESRVLRLQPFNEYRKRFG 398

Query: 498 MIPISKWEDLTDDKEVIKVLQEVYGDDVEKMDLQVGLHAEKKIKGFAISETAFFIFLLIA 557
           M P + +++LT +KE+   L+E+YG D++ ++   GL  EK        E+   +    +
Sbjct: 399 MKPYTSFQELTGEKEMAAELEELYG-DIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFS 457

Query: 558 SRRLEADRFFTTNF--NSKTYTEKGLEWVNKTETLKDVIDRHFPEMTK 603
            + L  +   +  +   S    E G   V    TLK ++  +      
Sbjct: 458 LKGLLGNPICSPEYWKASTFGGEVGFNLVKTA-TLKKLVCLNTKTCPY 504
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query633
g1cxp.1570 Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606 100.0
d1cvua1511 Prostaglandin H2 synthase {Mouse (Mus musculus) [T 100.0
d1q4ga1511 Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax 100.0
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure