Citrus Sinensis ID: 006852

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------63
MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPENSSQVISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAARCCGD
cccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEcccccccEEEEEEccccccccccccEEEEEEccccccccccccEEEEccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEccccccEEEccccEEEEEEEcccccccEEEEEEEEEcccccEEEccccccccccccccccHHHHHccccccccccEEEEEEEcccccHHHHHHHHHHHcccccccccEEEEEEEEEccccHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHcccccccccc
ccHHHHHHHHHHHHHHHHHHHHEccccccccccccccccccccccHHcccccccccccccccccccccccccccHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEcccHHcccccEEEEEccccEcccEEEEEEccccHHcEEEEEEEcccccccccccEEEEEcccccccccccccEEEEcccEHcccccccccccccccccccccccccHHHHHHcccccccHHHHcccccccccccccccccccccEEEEEEEEccccEEEEEcccEEcccccccccccccccccEEcccccHHHHccccccccccHHHHHccHHHHcccccccccEEEEEEEEcccccHHHHHHHHHHHHcHHHcccccEEEEEEEEccccHHHHHHHHHHHHHHccEEEEcHHHHHHHHHHHHHHHHHHcccccccEEEEEccccEEEcHHHHHHHHHcccccccEEEEEEEccccccccccccEEEcHHHccccccccccccccEEEcHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccEEcccccccccccccccEEEEEcccHHHHHHHHHHHHcccccHcccc
MKKWYGGVLIASLFMLLLLRYGfmknpigesYLTSLissnasnplewthtaaapgvqdpenssqvisiDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKlgytnrssvrkakekqcphflnkmnttdldrssfklqvpcgltqgssitiigipngllgnfridltgeplpgepdppivlHYNVRLlgdkitenpviVQNTWTlahdwgeevrcpspspekiikvdELDQcnklvgnddkrlptvstrlnnsrtsktkrffpfkqghLFVATIRvgsegiqttvdgkhitsFAYRETLEPWLVNEVRISGDLKLISVLAsglptsedsehttdlealrsyplslhkpvdLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNeartygdiqlmpfvdyyNLITWKTLAICIFGTDVVSAKFvmktdddaFVRVDEVLTSLKRINVHSGLLYglinsesrphrnpeskwyisleewpeetyppwahgpgyvvshDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEglqvryekdervhndgcrdgyvvahyqsPREMLCLWQKLkegnaarccgd
MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPENSSQVISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKlgytnrssvrkakekqcpHFLNkmnttdldrsSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRCPSPSPEKIIKVDELDQCNKlvgnddkrlptvstrlnnsrtsktkrffpfkqgHLFVATIRVgsegiqttvdgkHITSFAYRETLEPWLVNEVRISGDLKLISVLASGlptsedsehTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGlinsesrphrnpeSKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDervhndgcrDGYVVAHYQSPREMLCLWQKLKEGNAARCCGD
MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPENSSQVISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAARCCGD
***WYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISS*****LEWT****************VISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMAS************************FLN***TTDLDRSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRC*******IIKVDELDQCNKLV**********************KRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASG*************EALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLIN***********KWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGN*******
***WYGGVLIASLFMLLLLRYGFM******************************************************************TWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASV************************************SFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEP**GEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRCPSP******KVDELDQCNKLV**********************KRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVG***********WNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAARCCG*
MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPENSSQVISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGL**********DLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEG********
*KKWYGGVLIASLFMLLLLRYGFMKNPIGE**************************************************ISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKLG*************QCPHFLNKMNTTDLDRSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRCPSPSP**IIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAA*CC**
iiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPENSSQVISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAARCCGD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query628 2.2.26 [Sep-21-2011]
Q8L7F9643 Beta-1,3-galactosyltransf yes no 0.996 0.973 0.634 0.0
Q9ASW1619 Probable beta-1,3-galacto no no 0.939 0.953 0.429 1e-145
Q8RX55672 Probable beta-1,3-galacto no no 0.818 0.764 0.372 3e-96
Q8GXG6673 Probable beta-1,3-galacto no no 0.764 0.713 0.367 1e-92
Q9LV16681 Probable beta-1,3-galacto no no 0.816 0.753 0.372 1e-92
A7XDQ9684 Probable beta-1,3-galacto no no 0.757 0.695 0.355 3e-88
Q9Y2C3310 Beta-1,3-galactosyltransf yes no 0.385 0.780 0.312 1e-24
Q9N293298 Beta-1,3-galactosyltransf N/A no 0.369 0.778 0.321 3e-24
Q9N294301 Beta-1,3-galactosyltransf N/A no 0.374 0.780 0.317 3e-24
Q9N295297 Beta-1,3-galactosyltransf yes no 0.369 0.781 0.317 1e-23
>sp|Q8L7F9|B3GTF_ARATH Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1 Back     alignment and function desciption
 Score =  857 bits (2215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/640 (63%), Positives = 508/640 (79%), Gaps = 14/640 (2%)

Query: 1   MKKWYGGVLIASLFMLL-LLRYGFMKNPIGESYLTS----LISSNASNPLEWTHTAAAPG 55
           MK++YGG+L+ S+ M L + RY  +  P+ + Y+T+    +++ N + P+EW        
Sbjct: 1   MKRFYGGLLVVSMCMFLTVYRYVDLNTPVEKPYITAAASVVVTPNTTLPMEWLRITLPDF 60

Query: 56  VQDPENSSQVISID--AITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIK 113
           +++  N+ + IS D  A+  GLF ++N+SKEE++ LLTWN L+ L++++Q L NGV+AIK
Sbjct: 61  MKEARNTQEAISGDDIAVVSGLFVEQNVSKEEREPLLTWNRLESLVDNAQSLVNGVDAIK 120

Query: 114 EAGSAWNNLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLT 173
           EAG  W +L+++VE +KL   N +  RK KE+ CP FL+KMN T+ D SS KLQ+PCGLT
Sbjct: 121 EAGIVWESLVSAVEAKKLVDVNENQTRKGKEELCPQFLSKMNATEADGSSLKLQIPCGLT 180

Query: 174 QGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWT 233
           QGSSIT+IGIP+GL+G+FRIDLTG+PLPGEPDPPI++HYNVRLLGDK TE+PVIVQN+WT
Sbjct: 181 QGSSITVIGIPDGLVGSFRIDLTGQPLPGEPDPPIIVHYNVRLLGDKSTEDPVIVQNSWT 240

Query: 234 LAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSR-------TSK 286
            + DWG E RCP   P+   KVD+LD+CNK+VG +  R  + S + N SR        SK
Sbjct: 241 ASQDWGAEERCPKFDPDMNKKVDDLDECNKMVGGEINRTSSTSLQSNTSRGVPVAREASK 300

Query: 287 TKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLIS 346
            +++FPFKQG L VAT+RVG+EG+Q TVDGKHITSFA+R+TLEPWLV+E+RI+GD +LIS
Sbjct: 301 HEKYFPFKQGFLSVATLRVGTEGMQMTVDGKHITSFAFRDTLEPWLVSEIRITGDFRLIS 360

Query: 347 VLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTE 406
           +LASGLPTSE+SEH  DLEAL+S  LS  +P+DL IGVFSTANNFKRRMAVRRTWMQY +
Sbjct: 361 ILASGLPTSEESEHVVDLEALKSPTLSPLRPLDLVIGVFSTANNFKRRMAVRRTWMQYDD 420

Query: 407 VRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDV 466
           VRSG VAVRFFVGLHK+ +VN ELWNEARTYGD+QLMPFVDYY+LI+WKTLAICIFGT+V
Sbjct: 421 VRSGRVAVRFFVGLHKSPLVNLELWNEARTYGDVQLMPFVDYYSLISWKTLAICIFGTEV 480

Query: 467 VSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWP 526
            SAKF+MKTDDDAFVRVDEVL SL   N   GL+YGLINS+S+P RNP+SKWYIS EEWP
Sbjct: 481 DSAKFIMKTDDDAFVRVDEVLLSLSMTNNTRGLIYGLINSDSQPIRNPDSKWYISYEEWP 540

Query: 527 EETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEK 586
           EE YPPWAHGPGY+VS DI ++V K +KEG LKMFKLEDVAMGIWIA++ K GL+  YE 
Sbjct: 541 EEKYPPWAHGPGYIVSRDIAESVGKLFKEGNLKMFKLEDVAMGIWIAELTKHGLEPHYEN 600

Query: 587 DERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAARCC 626
           D R+ +DGC+DGYVVAHYQSP EM CLW+K +E   + CC
Sbjct: 601 DGRIISDGCKDGYVVAHYQSPAEMTCLWRKYQETKRSLCC 640
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of N-glycans containing Lewis a structures (with the combination of FUT13).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9ASW1|B3GTG_ARATH Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1 Back     alignment and function description
>sp|Q8RX55|B3GTI_ARATH Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1 Back     alignment and function description
>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2 Back     alignment and function description
>sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2 Back     alignment and function description
>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y2C3|B3GT5_HUMAN Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9N293|B3GT5_GORGO Beta-1,3-galactosyltransferase 5 (Fragment) OS=Gorilla gorilla gorilla GN=B3GALT5 PE=3 SV=2 Back     alignment and function description
>sp|Q9N294|B3GT5_PANPA Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan paniscus GN=B3GALT5 PE=3 SV=1 Back     alignment and function description
>sp|Q9N295|B3GT5_PANTR Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan troglodytes GN=B3GALT5 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query628
224112259632 predicted protein [Populus trichocarpa] 0.998 0.992 0.795 0.0
225425664636 PREDICTED: beta-1,3-galactosyltransferas 1.0 0.987 0.779 0.0
224098882647 predicted protein [Populus trichocarpa] 0.995 0.965 0.759 0.0
255562878631 transferase, transferring glycosyl group 0.995 0.990 0.756 0.0
357487041639 Beta-1,3-galactosyltransferase [Medicago 0.996 0.979 0.735 0.0
356499817639 PREDICTED: beta-1,3-galactosyltransferas 0.995 0.978 0.719 0.0
296082924635 unnamed protein product [Vitis vinifera] 0.998 0.987 0.710 0.0
225452833639 PREDICTED: beta-1,3-galactosyltransferas 0.998 0.981 0.705 0.0
449434780630 PREDICTED: beta-1,3-galactosyltransferas 0.992 0.988 0.689 0.0
356498304613 PREDICTED: beta-1,3-galactosyltransferas 0.958 0.982 0.716 0.0
>gi|224112259|ref|XP_002316134.1| predicted protein [Populus trichocarpa] gi|222865174|gb|EEF02305.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1051 bits (2717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/632 (79%), Positives = 550/632 (87%), Gaps = 5/632 (0%)

Query: 1   MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPE 60
           MKKWYGGVL+ASLFMLL+LRYG +KNPIG + L +  SSNAS PLEW H A  P VQ+PE
Sbjct: 1   MKKWYGGVLVASLFMLLILRYGLLKNPIGGNILLN-PSSNASKPLEWVHPAVPPAVQNPE 59

Query: 61  NSSQVISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWN 120
            SSQV S D I   LFA RNIS EE +SL TWNLLK LI+H+QV +NGVEAIKEAG+AW+
Sbjct: 60  TSSQVFSTDTIVSSLFAPRNISNEEHKSLQTWNLLKHLIDHAQVFANGVEAIKEAGNAWS 119

Query: 121 NLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLTQGSSITI 180
           +LMAS EEE+L YTN SS RK KEKQCPHFLNKMN T+LD S +KL +PCGLTQGSSITI
Sbjct: 120 SLMASAEEERLSYTNESSSRKVKEKQCPHFLNKMNATELDNSGYKLWLPCGLTQGSSITI 179

Query: 181 IGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGE 240
           I IP+GLLGNFRIDLTGE LPGEPDPPI+LHYNVRL GDKITE+PVIVQNTWT+AHDWGE
Sbjct: 180 ISIPDGLLGNFRIDLTGEALPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTVAHDWGE 239

Query: 241 EVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTV----STRLNNSRTSKTKRFFPFKQG 296
           E RCPSPSPEKI KVDELDQCNK+VG +D R+ ++    S R +    +K +R+FPFKQG
Sbjct: 240 EERCPSPSPEKIKKVDELDQCNKMVGRNDTRVTSMHSDHSRRSSLQEGTKARRYFPFKQG 299

Query: 297 HLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLPTSE 356
            L VAT+RVG EGIQ TVDGKHITSFAYRETLEPWLV+EVRISGDL LISV+ASGLPTSE
Sbjct: 300 QLSVATLRVGMEGIQMTVDGKHITSFAYRETLEPWLVSEVRISGDLNLISVVASGLPTSE 359

Query: 357 DSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVAVRF 416
           DSEH  DLE L+S PLS  K +DLFIGVFSTANNFKRRMAVRRTWMQY  VRSG VAVRF
Sbjct: 360 DSEHAVDLEVLKSAPLSPKKTLDLFIGVFSTANNFKRRMAVRRTWMQYAAVRSGAVAVRF 419

Query: 417 FVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVMKTD 476
           FVGLHKNQIVN ELWNEARTYGDIQLMPFVDYYNLIT+KTLAICIFGT+V SAK+VMKTD
Sbjct: 420 FVGLHKNQIVNEELWNEARTYGDIQLMPFVDYYNLITFKTLAICIFGTEVASAKYVMKTD 479

Query: 477 DDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHG 536
           DDAFVRVDEVL SLKRI V  GLLYGLINS+SRPHR+ ESKWYIS EEW EETYPPWAHG
Sbjct: 480 DDAFVRVDEVLASLKRIKVSHGLLYGLINSDSRPHRSTESKWYISPEEWSEETYPPWAHG 539

Query: 537 PGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCR 596
           PGYVVS DI KAVYKRYKEGRLKMFKLEDVAMGIWIA+MKKEGL+V+YE + RVHN+GCR
Sbjct: 540 PGYVVSRDIAKAVYKRYKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYEMEGRVHNEGCR 599

Query: 597 DGYVVAHYQSPREMLCLWQKLKEGNAARCCGD 628
           DGYVVAHYQ+PREMLCLWQKL+EGN ARCCGD
Sbjct: 600 DGYVVAHYQAPREMLCLWQKLQEGNVARCCGD 631

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225425664|ref|XP_002269607.1| PREDICTED: beta-1,3-galactosyltransferase 15 [Vitis vinifera] gi|296086360|emb|CBI31949.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224098882|ref|XP_002311304.1| predicted protein [Populus trichocarpa] gi|222851124|gb|EEE88671.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255562878|ref|XP_002522444.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223538329|gb|EEF39936.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357487041|ref|XP_003613808.1| Beta-1,3-galactosyltransferase [Medicago truncatula] gi|355515143|gb|AES96766.1| Beta-1,3-galactosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356499817|ref|XP_003518733.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Glycine max] Back     alignment and taxonomy information
>gi|296082924|emb|CBI22225.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225452833|ref|XP_002283624.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449434780|ref|XP_004135174.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Cucumis sativus] gi|449478400|ref|XP_004155308.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356498304|ref|XP_003517993.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query628
TAIR|locus:2200660643 GALT1 "galactosyltransferase1" 0.996 0.973 0.634 5.6e-226
TAIR|locus:2081071619 AT3G06440 [Arabidopsis thalian 0.950 0.964 0.435 2.7e-132
TAIR|locus:2172219681 AT5G62620 [Arabidopsis thalian 0.687 0.634 0.407 1e-90
TAIR|locus:2133094741 GALT2 "AGP galactosyltransfera 0.684 0.580 0.370 1.2e-85
TAIR|locus:2027290672 AT1G74800 [Arabidopsis thalian 0.689 0.644 0.406 2.4e-83
TAIR|locus:2205774673 AT1G27120 [Arabidopsis thalian 0.699 0.652 0.382 9.7e-80
UNIPROTKB|E1C4T5326 B3GALT1 "Uncharacterized prote 0.437 0.843 0.284 3.5e-25
UNIPROTKB|F1N0D5326 B3GALT1 "Uncharacterized prote 0.410 0.791 0.289 3.5e-25
UNIPROTKB|F1PGN6326 B3GALT1 "Uncharacterized prote 0.410 0.791 0.289 7.5e-25
UNIPROTKB|Q9Y5Z6326 B3GALT1 "Beta-1,3-galactosyltr 0.410 0.791 0.289 9.6e-25
TAIR|locus:2200660 GALT1 "galactosyltransferase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2181 (772.8 bits), Expect = 5.6e-226, P = 5.6e-226
 Identities = 406/640 (63%), Positives = 508/640 (79%)

Query:     1 MKKWYGGVLIASLFMLLLL-RYGFMKNPIGESYLTS----LISSNASNPLEWTHTAAAPG 55
             MK++YGG+L+ S+ M L + RY  +  P+ + Y+T+    +++ N + P+EW        
Sbjct:     1 MKRFYGGLLVVSMCMFLTVYRYVDLNTPVEKPYITAAASVVVTPNTTLPMEWLRITLPDF 60

Query:    56 VQDPENSSQVISID--AITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIK 113
             +++  N+ + IS D  A+  GLF ++N+SKEE++ LLTWN L+ L++++Q L NGV+AIK
Sbjct:    61 MKEARNTQEAISGDDIAVVSGLFVEQNVSKEEREPLLTWNRLESLVDNAQSLVNGVDAIK 120

Query:   114 EAGSAWNNLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLT 173
             EAG  W +L+++VE +KL   N +  RK KE+ CP FL+KMN T+ D SS KLQ+PCGLT
Sbjct:   121 EAGIVWESLVSAVEAKKLVDVNENQTRKGKEELCPQFLSKMNATEADGSSLKLQIPCGLT 180

Query:   174 QGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWT 233
             QGSSIT+IGIP+GL+G+FRIDLTG+PLPGEPDPPI++HYNVRLLGDK TE+PVIVQN+WT
Sbjct:   181 QGSSITVIGIPDGLVGSFRIDLTGQPLPGEPDPPIIVHYNVRLLGDKSTEDPVIVQNSWT 240

Query:   234 LAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSR-------TSK 286
              + DWG E RCP   P+   KVD+LD+CNK+VG +  R  + S + N SR        SK
Sbjct:   241 ASQDWGAEERCPKFDPDMNKKVDDLDECNKMVGGEINRTSSTSLQSNTSRGVPVAREASK 300

Query:   287 TKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLIS 346
              +++FPFKQG L VAT+RVG+EG+Q TVDGKHITSFA+R+TLEPWLV+E+RI+GD +LIS
Sbjct:   301 HEKYFPFKQGFLSVATLRVGTEGMQMTVDGKHITSFAFRDTLEPWLVSEIRITGDFRLIS 360

Query:   347 VLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTE 406
             +LASGLPTSE+SEH  DLEAL+S  LS  +P+DL IGVFSTANNFKRRMAVRRTWMQY +
Sbjct:   361 ILASGLPTSEESEHVVDLEALKSPTLSPLRPLDLVIGVFSTANNFKRRMAVRRTWMQYDD 420

Query:   407 VRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDV 466
             VRSG VAVRFFVGLHK+ +VN ELWNEARTYGD+QLMPFVDYY+LI+WKTLAICIFGT+V
Sbjct:   421 VRSGRVAVRFFVGLHKSPLVNLELWNEARTYGDVQLMPFVDYYSLISWKTLAICIFGTEV 480

Query:   467 VSAKFVMKTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWP 526
              SAKF+MKTDDDAFVRVDEVL SL   N   GL+YGLINS+S+P RNP+SKWYIS EEWP
Sbjct:   481 DSAKFIMKTDDDAFVRVDEVLLSLSMTNNTRGLIYGLINSDSQPIRNPDSKWYISYEEWP 540

Query:   527 EETYPPWAHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEK 586
             EE YPPWAHGPGY+VS DI ++V K +KEG LKMFKLEDVAMGIWIA++ K GL+  YE 
Sbjct:   541 EEKYPPWAHGPGYIVSRDIAESVGKLFKEGNLKMFKLEDVAMGIWIAELTKHGLEPHYEN 600

Query:   587 DERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAARCC 626
             D R+ +DGC+DGYVVAHYQSP EM CLW+K +E   + CC
Sbjct:   601 DGRIISDGCKDGYVVAHYQSPAEMTCLWRKYQETKRSLCC 640
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0010488 "UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity" evidence=IDA
GO:0010493 "Lewis a epitope biosynthetic process" evidence=IMP
TAIR|locus:2081071 AT3G06440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172219 AT5G62620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133094 GALT2 "AGP galactosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027290 AT1G74800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205774 AT1G27120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N0D5 B3GALT1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PGN6 B3GALT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y5Z6 B3GALT1 "Beta-1,3-galactosyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8L7F9B3GTF_ARATH2, ., 4, ., 1, ., -0.63430.99680.9735yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00101597
SubName- Full=Putative uncharacterized protein; (633 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 1e-39
pfam00337129 pfam00337, Gal-bind_lectin, Galactoside-binding le 3e-26
cd00070127 cd00070, GLECT, Galectin/galactose-binding lectin 2e-24
smart00908122 smart00908, Gal-bind_lectin, Galactoside-binding l 3e-22
smart00276128 smart00276, GLECT, Galectin 2e-14
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 4e-08
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score = 1255 bits (3248), Expect = 0.0
 Identities = 509/635 (80%), Positives = 559/635 (88%), Gaps = 7/635 (1%)

Query: 1   MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPE 60
           MKKWYGGVL+ SLFMLL+LRY  +KNPIGESYL S+  SN +NPLEW      P VQ+PE
Sbjct: 1   MKKWYGGVLVVSLFMLLVLRYVLLKNPIGESYLQSVFPSNTTNPLEWLDPTNPPAVQNPE 60

Query: 61  NSSQVISIDAITFGLFAQRNISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWN 120
           NSSQVIS D I   LFA RNIS EEQQSLLTWN LK L++H+QVL NGVEAIKEAG AW 
Sbjct: 61  NSSQVISTDTIVSSLFATRNISNEEQQSLLTWNHLKHLVDHAQVLPNGVEAIKEAGVAWE 120

Query: 121 NLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLDRSSFKLQVPCGLTQGSSITI 180
           +LMASVEEEKLGYTN SS+RK+KEKQCP+FLNKMN T+L  S +KL++PCGLTQGSSITI
Sbjct: 121 SLMASVEEEKLGYTNESSLRKSKEKQCPYFLNKMNATELGDSGYKLKIPCGLTQGSSITI 180

Query: 181 IGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGE 240
           IGIP+GLLGNFRIDLTGEPLPGEPDPPI+LHYNVRLLGDKITE+PVIVQNTWT AHDWGE
Sbjct: 181 IGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLLGDKITEDPVIVQNTWTAAHDWGE 240

Query: 241 EVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTS-------KTKRFFPF 293
           E RCPSP P+K  KVD+LDQCNK+VG DDKR+ + S   N SR S       K +R+FPF
Sbjct: 241 EERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSLHSNGSRRSPMSQEATKARRYFPF 300

Query: 294 KQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLP 353
           KQG+L VAT+RVG+EGIQ TVDGKHITSFAYRETLEPWLV+EVRISGDLKLISVLASGLP
Sbjct: 301 KQGYLSVATLRVGTEGIQMTVDGKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLP 360

Query: 354 TSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKRRMAVRRTWMQYTEVRSGTVA 413
           TSEDSEH  DLEAL+S PLS  KP+DLFIGVFSTANNFKRRMAVRRTWMQY  VRSG VA
Sbjct: 361 TSEDSEHVIDLEALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVA 420

Query: 414 VRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVM 473
           VRFFVGLHKNQ+VN ELWNEARTYGDIQLMPFVDYY+LITWKTLAICIFGT+VVSAK+VM
Sbjct: 421 VRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVM 480

Query: 474 KTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPW 533
           KTDDDAFVRVDEVL SLKR NV  GLLYGLINS+S+PHRNP+SKWYIS EEWPEETYPPW
Sbjct: 481 KTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPW 540

Query: 534 AHGPGYVVSHDIGKAVYKRYKEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHND 593
           AHGPGYVVS DI K VYKR+KEGRLKMFKLEDVAMGIWIA+MKKEGL+V+YE D R++N+
Sbjct: 541 AHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNE 600

Query: 594 GCRDGYVVAHYQSPREMLCLWQKLKEGNAARCCGD 628
           GC+DGYVVAHYQSPREMLCLWQKL+EG  A CCG+
Sbjct: 601 GCKDGYVVAHYQSPREMLCLWQKLQEGKRATCCGE 635

Length = 636
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215865 pfam00337, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|238025 cd00070, GLECT, Galectin/galactose-binding lectin Back     alignment and domain information
>gnl|CDD|214904 smart00908, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|214596 smart00276, GLECT, Galectin Back     alignment and domain information
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 628
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
smart00276128 GLECT Galectin. Galectin - galactose-binding lecti 99.98
PF00337133 Gal-bind_lectin: Galactoside-binding lectin; Inter 99.97
cd00070127 GLECT Galectin/galactose-binding lectin. This doma 99.97
KOG3587143 consensus Galectin, galactose-binding lectin [Extr 99.94
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.67
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.44
PLN03153 537 hypothetical protein; Provisional 98.89
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.33
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 95.3
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 94.24
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 92.92
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 92.72
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 91.63
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 91.34
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 91.01
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 90.65
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 90.47
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 89.65
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 88.71
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 88.41
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 88.05
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 86.79
PRK11204 420 N-glycosyltransferase; Provisional 86.78
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 86.68
cd06423180 CESA_like CESA_like is the cellulose synthase supe 86.63
COG1216305 Predicted glycosyltransferases [General function p 86.18
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 85.91
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 85.12
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 85.07
PRK14583 444 hmsR N-glycosyltransferase; Provisional 84.77
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 83.94
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 83.62
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 82.54
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 82.1
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 81.54
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 81.03
COG1215 439 Glycosyltransferases, probably involved in cell wa 80.3
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-162  Score=1352.34  Aligned_cols=628  Identities=81%  Similarity=1.314  Sum_probs=603.7

Q ss_pred             CccccchHHHHHHHHHHHHHHhcccCCCCCcccccccccCCCCCccccccCCCCCCCCCCCCcceeeccccccccccCCC
Q 006852            1 MKKWYGGVLIASLFMLLLLRYGFMKNPIGESYLTSLISSNASNPLEWTHTAAAPGVQDPENSSQVISIDAITFGLFAQRN   80 (628)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (628)
                      ||||+||+||++|||+|+|||.++++|.++++++.++..|+|+||+|+.++.+|++++|+|++++++.++++|+||+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (636)
T PLN03133          1 MKKWYGGVLVVSLFMLLVLRYVLLKNPIGESYLQSVFPSNTTNPLEWLDPTNPPAVQNPENSSQVISTDTIVSSLFATRN   80 (636)
T ss_pred             CceeeeeehHHHHHHHHHHHHHHhcCCCCCCCcccccccccCCchhhcccCCCccccCCCccceeeccccchhhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChhhhhhhhhhhhhHHhhhhccccccHHHHHHHHHHHHHHHHHhHHHhhccCCCCCCcccccCCcCcccccccCCCCCC
Q 006852           81 ISKEEQQSLLTWNLLKQLINHSQVLSNGVEAIKEAGSAWNNLMASVEEEKLGYTNRSSVRKAKEKQCPHFLNKMNTTDLD  160 (628)
Q Consensus        81 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~v~~~~~~~~~  160 (628)
                      +|+|++++|++||+||+|++|||+||+|+|||+||+.||++|+++++++++++.+.++..+.++++||++|+.|++++..
T Consensus        81 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~aw~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~~~~~~~~~~~  160 (636)
T PLN03133         81 ISNEEQQSLLTWNHLKHLVDHAQVLPNGVEAIKEAGVAWESLMASVEEEKLGYTNESSLRKSKEKQCPYFLNKMNATELG  160 (636)
T ss_pred             CchhhhhhhhHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCCCCchhhhhccccccc
Confidence            99999999999999999999999999999999999999999999999999999998887788999999999999999999


Q ss_pred             CCceeeeeCCCCCCCCEEEEEEEeCCCCCceEEEcCCCCCCCCCCCCeEEEEEEEeCCCCCCCCCEEEEcCccCCCCccc
Q 006852          161 RSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGE  240 (628)
Q Consensus       161 ~~p~~~~ip~gL~~Gs~I~V~G~p~~~~~~F~InL~~~~~~~~~~~~i~LH~NpR~~~~~~~~~~~IV~Ns~~~~~~Wg~  240 (628)
                      +.+|++.|||||.+|++|||+|+|.+++++|+|||+|+..+|++++||||||||||++|+++++|+||||||+.+|+||.
T Consensus       161 ~~~~~~~iP~GL~~Gs~ItI~G~p~~~~~~F~InL~g~~~~g~~~~~iaLHfNpRf~gd~~t~~~vIV~NT~~~~~~WG~  240 (636)
T PLN03133        161 DSGYKLKIPCGLTQGSSITIIGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLLGDKITEDPVIVQNTWTAAHDWGE  240 (636)
T ss_pred             CCceEEecCCcCCCCCEEEEEEEeCCCCCeEEEEEeecCcCCCCCCCEEEEEcCccCCCccccCCEEEeCCCcCCCcccH
Confidence            89999999999999999999999999999999999999888888899999999999999999999999999993389999


Q ss_pred             ceecCCCCCCccccccchhhhhcccCCCCCCCCcccccccc-------cCCCCCccCCCCcCCCEEEEEEEEcCceEEEE
Q 006852          241 EVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNN-------SRTSKTKRFFPFKQGHLFVATIRVGSEGIQTT  313 (628)
Q Consensus       241 EeR~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~fPF~~G~~F~i~i~~~~egf~v~  313 (628)
                      ||||++|+|.++++||||++||+|+|++++++.+++.+.|.       +++.+..++|||++|++|++||+|+.|||||+
T Consensus       241 EERc~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~lti~~g~egf~v~  320 (636)
T PLN03133        241 EERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSLHSNGSRRSPMSQEATKARRYFPFKQGYLSVATLRVGTEGIQMT  320 (636)
T ss_pred             hhhcCCCCccccccccchhhhhhhhcccccccccccccccccccccccccccccccCCCCCCCCcEEEEEEecCCEEEEE
Confidence            99999999999999999999999999999988888765553       67788889999999999999999999999999


Q ss_pred             ECCeEEEEEEeccCCCcccceEEEEcCCeeEEEeeccCCCCCCCCcccCCchhhcCCCCCCCCCeeEEEEEecCcCcHHH
Q 006852          314 VDGKHITSFAYRETLEPWLVNEVRISGDLKLISVLASGLPTSEDSEHTTDLEALRSYPLSLHKPVDLFIGVFSTANNFKR  393 (628)
Q Consensus       314 VnG~h~~sF~yR~~l~p~~v~~l~i~Gdv~l~sv~~~~LP~s~~~~~~~~~~~l~sp~~~~~~~~~LlI~V~S~~~~~~r  393 (628)
                      |||+|+++|+||++++||.|++|+|+|||+|+||.+.|+|++|++++++|++.+++|+++++++++|||+|+|+++||+|
T Consensus       321 VnG~H~tsF~yR~~lep~~V~~l~V~GDv~l~SV~a~~~p~~~~~~~~~d~e~lkAppL~~~~~~~LlI~V~Sap~nf~r  400 (636)
T PLN03133        321 VDGKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLPTSEDSEHVIDLEALKSPPLSPKKPLDLFIGVFSTANNFKR  400 (636)
T ss_pred             ECCeEEEeeeCCCCCCccceeEEEEeCcEEEEEEEeeCCCCCCchhcccchHHhcCCCCCCCCceEEEEEEeCCcccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999878899999999999999999


Q ss_pred             HHHHHHHhccccccCCCeEEEEEEEeecCChhhhhhHHHHHhhcCCeEEEeccccCCchhHHHHHHHHhhhccCCceEEE
Q 006852          394 RMAVRRTWMQYTEVRSGTVAVRFFVGLHKNQIVNGELWNEARTYGDIQLMPFVDYYNLITWKTLAICIFGTDVVSAKFVM  473 (628)
Q Consensus       394 R~aIR~TW~~~~~~~~~~v~v~FvvG~~~~~~~~~~L~~Ea~~ygDIi~~df~DsY~nLt~Ktl~~~~~a~~~~~a~fvl  473 (628)
                      |+|||+|||+....++..++++|++|.+.++.++..|++|+++||||||+||+|+|+|||+||+++++|+.+|++++|+|
T Consensus       401 R~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFil  480 (636)
T PLN03133        401 RMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVM  480 (636)
T ss_pred             HHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEE
Confidence            99999999997766677899999999999888999999999999999999999999999999999999999999999999


Q ss_pred             EeCCcceecHHHHHHHHHhcCCCCceEEEEecCCCCCcCCCCCCeeeCCCCCCCCCCCCCcCCCccccchHHHHHHHHHh
Q 006852          474 KTDDDAFVRVDEVLTSLKRINVHSGLLYGLINSESRPHRNPESKWYISLEEWPEETYPPWAHGPGYVVSHDIGKAVYKRY  553 (628)
Q Consensus       474 K~DDDtfVnv~~Ll~~L~~~~~~~~~~~G~v~~~~~p~Rd~~~Kwyvs~~~yp~~~YPpYc~G~gYVLS~dla~~I~~~~  553 (628)
                      |+|||+|||+++|+++|+.....+.+|+|++..+..|+|++.+|||||+++||.+.|||||+|+|||||+|+|++|+.++
T Consensus       481 K~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~eyp~~~YPpYasG~gYVlS~Dla~~L~~~s  560 (636)
T PLN03133        481 KTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRH  560 (636)
T ss_pred             EcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHHHCCCCCCCCCCCcCEEEEcHHHHHHHHHhh
Confidence            99999999999999999887777789999999999999999999999999999999999999999999999999999886


Q ss_pred             hcCccCCCCcchHHHHHHHHHhhhcCceeeccCCCcccCCCcccCcEEEEecCHHHHHHHHHHhhcCCCCCCcCC
Q 006852          554 KEGRLKMFKLEDVAMGIWIADMKKEGLQVRYEKDERVHNDGCRDGYVVAHYQSPREMLCLWQKLKEGNAARCCGD  628 (628)
Q Consensus       554 ~~~~~~~~~lEDV~iGi~l~~l~~~gi~v~~~~d~rf~~~~C~~~~i~~H~~~P~~M~~lW~~l~~~~~~~C~~~  628 (628)
                      ++..+++|++||||||+|++++++.|+++.|.++.+++..+|..+++++|+++|++|+++|++++++++++||++
T Consensus       561 ~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~~~~C~~~~i~~H~~sP~eM~~lW~~l~~~~~~~Cc~~  635 (636)
T PLN03133        561 KEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNEGCKDGYVVAHYQSPREMLCLWQKLQEGKRATCCGE  635 (636)
T ss_pred             hhcccCcCChhhHhHHHHHHHhcccCCCceeeCCCcccCCcCCCCeEEEecCCHHHHHHHHHHHhccCCCCccCC
Confidence            556899999999999999999999999999999999999999999999999999999999999999988999986

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00276 GLECT Galectin Back     alignment and domain information
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements Back     alignment and domain information
>cd00070 GLECT Galectin/galactose-binding lectin Back     alignment and domain information
>KOG3587 consensus Galectin, galactose-binding lectin [Extracellular structures] Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 7e-28
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 4e-25
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 7e-24
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 9e-24
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 2e-23
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 4e-23
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 4e-23
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 1e-22
1is3_A135 Congerin II; complex with lactose and MES, sugar b 2e-22
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 2e-22
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 2e-22
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 3e-22
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 2e-16
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 5e-22
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 5e-21
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 8e-22
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 2e-21
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 8e-21
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 2e-20
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 6e-19
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 2e-18
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 4e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
2wkk_A150 Galectin-2; sugar-binding protein, secreted, cell 4e-09
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 8e-07
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 1e-06
1ww7_A160 Galectin; carbohydrate recognition domain,X-RAY cr 8e-05
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
 Score =  108 bits (271), Expect = 7e-28
 Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 56/192 (29%)

Query: 164 FKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITE 223
           F  ++   +  G ++ + G  N    +F +DL            I LH N RL       
Sbjct: 19  FAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGK-----SKDIALHLNPRL------N 67

Query: 224 NPVIVQNTWTLAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSR 283
               V+N++     WGEE R  +                                     
Sbjct: 68  IKAFVRNSFL-QESWGEEERNITS------------------------------------ 90

Query: 284 TSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISGDLK 343
                  FPF  G  F   I       +  V+G H   + +R   E   ++ + I+GD+ 
Sbjct: 91  -------FPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFK-ELSSIDTLEINGDIH 142

Query: 344 LISVLASGLPTS 355
           L+ V +   P+S
Sbjct: 143 LLEVRSWSGPSS 154
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Length = 154 Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Length = 164 Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Length = 138 Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Length = 138 Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Length = 144 Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 164 Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Length = 159 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Length = 135 Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} PDB: 3nv2_A* 3nv3_A* 3nv4_A* Length = 138 Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Length = 148 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Length = 134 Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Length = 142 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Length = 137 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} Length = 135 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Length = 132 Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Length = 129 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Length = 134 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A* Length = 150 Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Length = 164 Back     alignment and structure
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A Length = 160 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query628
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 100.0
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 100.0
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 100.0
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 100.0
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 100.0
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 100.0
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 100.0
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 100.0
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 100.0
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 100.0
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 100.0
1is3_A135 Congerin II; complex with lactose and MES, sugar b 100.0
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 100.0
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 99.98
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 99.98
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.97
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 99.97
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 99.97
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 99.97
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.97
2wkk_A150 Galectin-2; sugar-binding protein, secreted, cell 99.97
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.96
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.96
1ww7_A160 Galectin; carbohydrate recognition domain,X-RAY cr 99.94
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 99.94
4agr_A146 Galectin; sugar binding protein; 2.10A {Cinachyrel 99.93
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.86
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 92.92
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 92.66
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 90.48
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 89.54
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 89.35
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=4.5e-36  Score=285.18  Aligned_cols=138  Identities=28%  Similarity=0.437  Sum_probs=128.9

Q ss_pred             CCceeeeeCCCCCCCCEEEEEEEeCCCCCceEEEcCCCCCCCCCCCCeEEEEEEEeCCCCCCCCCEEEEcCccCCCCccc
Q 006852          161 RSSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGE  240 (628)
Q Consensus       161 ~~p~~~~ip~gL~~Gs~I~V~G~p~~~~~~F~InL~~~~~~~~~~~~i~LH~NpR~~~~~~~~~~~IV~Ns~~~~~~Wg~  240 (628)
                      .+||+..||+||.+|++|+|+|+|..++++|.|||+++.     .++|+|||||||+++      +||+||+.+ |.||.
T Consensus        16 ~vPf~~~ip~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~-----~~dialHfnpRf~~~------~IV~Ns~~~-g~Wg~   83 (155)
T 2yro_A           16 SLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGK-----SKDIALHLNPRLNIK------AFVRNSFLQ-ESWGE   83 (155)
T ss_dssp             CSSEEEECSSCCCTTCEEEEEEEECTTCCCEEEEEEETT-----TTEEEEEEECCSSSC------CCEEEEECS-SCBCC
T ss_pred             ccCEeeecCCCCccCCEEEEEEEECCCCCEEEEEEecCC-----CCCEEEEEEEEcCCC------EEEEEcccC-CEecc
Confidence            389999999999999999999999999999999999963     268999999999987      899999998 89999


Q ss_pred             ceecCCCCCCccccccchhhhhcccCCCCCCCCcccccccccCCCCCccCCCCcCCCEEEEEEEEcCceEEEEECCeEEE
Q 006852          241 EVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHIT  320 (628)
Q Consensus       241 EeR~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~i~i~~~~egf~v~VnG~h~~  320 (628)
                      |||+                                           ...|||.+|++|+|+|+++.++|+|+|||+|++
T Consensus        84 EEr~-------------------------------------------~~~fPF~~G~~F~l~I~~~~~~f~V~VNg~~~~  120 (155)
T 2yro_A           84 EERN-------------------------------------------ITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSL  120 (155)
T ss_dssp             CCCC-------------------------------------------CSCCCCCTTSEEEEEEEECSSEEEEEETTEEEE
T ss_pred             ceee-------------------------------------------CCCccccCCCeEEEEEEEcCCEEEEEECCEEEE
Confidence            9997                                           234699999999999999999999999999999


Q ss_pred             EEEecc-CCCcccceEEEEcCCeeEEEeeccCCCCC
Q 006852          321 SFAYRE-TLEPWLVNEVRISGDLKLISVLASGLPTS  355 (628)
Q Consensus       321 sF~yR~-~l~p~~v~~l~i~Gdv~l~sv~~~~LP~s  355 (628)
                      +|+||. ++  +.|++|.|.||++|++|.+.++|+|
T Consensus       121 ~F~hR~~pl--~~I~~l~I~Gdv~l~~V~~~~~~~~  154 (155)
T 2yro_A          121 EYKHRFKEL--SSIDTLEINGDIHLLEVRSWSGPSS  154 (155)
T ss_dssp             EEECCCSCG--GGCCEEEEEESEEEEEEEEECCCCC
T ss_pred             EecCcCCCH--HHCcEEEEeCCEEEEEEEEecCCCC
Confidence            999997 54  7999999999999999999999986
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A* Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Back     alignment and structure
>4agr_A Galectin; sugar binding protein; 2.10A {Cinachyrella} PDB: 4agg_A 4agv_A Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 628
d1lcla_141 b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein 5e-24
d2gala_133 b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [Ta 3e-22
d1is3a_134 b.29.1.3 (A:) Congerin II {Conger eel (Conger myri 9e-21
d2nn8a1137 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo s 9e-20
d1w6na_134 b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [Ta 6e-19
d1c1la_135 b.29.1.3 (A:) Congerin I {Conger eel (Conger myria 3e-18
d1hlca_129 b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo s 5e-15
d1qmja_132 b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) 5e-13
d1a78a_134 b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [Ta 2e-12
d1ulea_150 b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprino 9e-11
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Charcot-Leyden crystal (CLC) protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 5e-24
 Identities = 34/187 (18%), Positives = 59/187 (31%), Gaps = 60/187 (32%)

Query: 164 FKLQVPCGLTQGSSITIIGIPNGLLGN---FRIDLTGEPLPGEPDPPIVLHYNVRLLGDK 220
                   L+ GS++TI G P     N    ++D   E    + +  IV H+ V      
Sbjct: 5   VPYTEAASLSTGSTVTIKGRPLVCFLNEPYLQVDFHTEM---KEESDIVFHFQVCF---- 57

Query: 221 ITENPVIVQNTWTLAHDWGEEVRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLN 280
                 +V N+      W ++V   +                                  
Sbjct: 58  ---GRRVVMNSRE-YGAWKQQVESKN---------------------------------- 79

Query: 281 NSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITSFAYRETLEPWLVNEVRISG 340
                      PF+ G  F  +I V  +  Q  V+G+   +F +R  ++P  V  V++  
Sbjct: 80  ----------MPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHR--IKPEAVKMVQVWR 127

Query: 341 DLKLISV 347
           D+ L   
Sbjct: 128 DISLTKF 134
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 134 Back     information, alignment and structure
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Length = 137 Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 134 Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 135 Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Length = 129 Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 132 Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Length = 134 Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Length = 150 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query628
d2gala_133 Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2nn8a1137 Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606] 100.0
d1lcla_141 Charcot-Leyden crystal (CLC) protein {Human (Homo 99.97
d1qmja_132 Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} 99.97
d1w6na_134 Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1is3a_134 Congerin II {Conger eel (Conger myriaster) [TaxId: 99.97
d1hlca_129 S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId 99.97
d1c1la_135 Congerin I {Conger eel (Conger myriaster) [TaxId: 99.97
d1a78a_134 Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} 99.96
d1ulea_150 Galectin-2 {Inky cap fungus (Coprinopsis cinerea) 99.94
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 84.82
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Galectin-7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-35  Score=268.96  Aligned_cols=132  Identities=27%  Similarity=0.391  Sum_probs=123.7

Q ss_pred             CceeeeeCCCCCCCCEEEEEEEeCCCCCceEEEcCCCCCCCCCCCCeEEEEEEEeCCCCCCCCCEEEEcCccCCCCcccc
Q 006852          162 SSFKLQVPCGLTQGSSITIIGIPNGLLGNFRIDLTGEPLPGEPDPPIVLHYNVRLLGDKITENPVIVQNTWTLAHDWGEE  241 (628)
Q Consensus       162 ~p~~~~ip~gL~~Gs~I~V~G~p~~~~~~F~InL~~~~~~~~~~~~i~LH~NpR~~~~~~~~~~~IV~Ns~~~~~~Wg~E  241 (628)
                      +||+.+||+||.+|++|+|+|++.+++++|+|||+++..   +++||+|||||||+++      .||+||+.+ |.||.|
T Consensus         1 vPf~~~lp~gl~~G~~i~i~G~~~~~~~~F~inl~~~~~---~~~di~~Hfn~Rf~~~------~IV~Ns~~~-g~Wg~E   70 (133)
T d2gala_           1 VPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEE---QGSDAALHFNPRLDTS------EVVFNSKEQ-GSWGRE   70 (133)
T ss_dssp             CCEEEECTTCCCTTCEEEEEEECCTTCCBEEEEEESSSS---TTCCEEEEEEEETTTT------EEEEEEEET-TEECCC
T ss_pred             CCEeeecCCCCCCCCEEEEEEEECCCCCEEEEEEEeCCC---CCCCEEEEEeeEcCCC------EEEEECCcC-CeECCc
Confidence            589999999999999999999999999999999998653   4578999999999887      999999998 899999


Q ss_pred             eecCCCCCCccccccchhhhhcccCCCCCCCCcccccccccCCCCCccCCCCcCCCEEEEEEEEcCceEEEEECCeEEEE
Q 006852          242 VRCPSPSPEKIIKVDELDQCNKLVGNDDKRLPTVSTRLNNSRTSKTKRFFPFKQGHLFVATIRVGSEGIQTTVDGKHITS  321 (628)
Q Consensus       242 eR~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~i~i~~~~egf~v~VnG~h~~s  321 (628)
                      ||+                                            ..|||.+|++|+|+|+++.++|+|+|||+|+++
T Consensus        71 er~--------------------------------------------~~~Pf~~G~~F~l~I~~~~~~f~V~vng~~~~~  106 (133)
T d2gala_          71 ERG--------------------------------------------PGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHH  106 (133)
T ss_dssp             EEC--------------------------------------------SSCCCCTTCEEEEEEEECSSEEEEEETTEEEEE
T ss_pred             eEE--------------------------------------------CCCCCCCCCeeEEEEEECCCEEEEEECCeeEEE
Confidence            997                                            689999999999999999999999999999999


Q ss_pred             EEeccCCCcccceEEEEcCCeeEEEeec
Q 006852          322 FAYRETLEPWLVNEVRISGDLKLISVLA  349 (628)
Q Consensus       322 F~yR~~l~p~~v~~l~i~Gdv~l~sv~~  349 (628)
                      |+||.++  +.|+.|.|.||++|++|+.
T Consensus       107 F~~R~p~--~~i~~l~i~Gdv~l~~V~i  132 (133)
T d2gala_         107 FRHRLPL--ARVRLVEVGGDVQLDSVRI  132 (133)
T ss_dssp             EECSSCG--GGCCEEEEEESCEEEEEEE
T ss_pred             ecCcCCh--hhccEEEEECCEEEEEEEE
Confidence            9999865  6899999999999999974
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure