Citrus Sinensis ID: 006853

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------63

MATEKWIDFTHQYNPCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIGIHDPNVIESAK

cccccccccccccccEEEEEEEEEEEccEEEEEEEEccccEEEEEEEEEccccccEEEcccccccHHHHHHHHHHHccccccccccccEEEEEEEEEEEEEcccEEEEEEEcEEEEEEEccEEEEEEEEEEEEEccccccccHHHccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHccccccccccccccccccHHHHHHHHHccccccEEEEEEEccEEEEEEEEcccEEEEEEEEccccccccccccccccccccccccEEEEEEEEEEcccccccccEEEEEEEccccccccEEccccccccccEEcccccccHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcHHHHHcccccccccccEEEEccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccccccccccccccccHHcccc

cccccccccccccccEEEEEEEEEEcccEEEEEEEcccccEEEEEEEEcccccccEEEccccEccHHHHHHHHHHHHcccccccccHEEEEEEEEEEEEEEcccEEEEEEEEccEEEEEcccEEEEEcccEEEEcccccccccccccHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHcccccccccccccEEEHHHHHHHHHHHccccccEEEEEEEEEEccEEEEcccEEEEEEEEEccccHHHHHHHEccccccccEEcccccEEEEEccccccccccEEEEEEEccccEEEEEcccccccccccEEEcccccHHHHHHHHHHHHHHHHcccEEEEEHEccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHccHHHHHHHHHHHHHHHHHcccEEEcccccccccEccccccccccccccccccccccHHHHHccccccccccccccccccHHHHccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccHHEEEccccHHHcccHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccEEcccccEccccccccccccccc

MATEKWIDfthqynpcflqkftlyetrsnfyicgrykktNLWRVLKIYrlepselnivedsatysdfeyLDLLRRvhdgnrstgglkLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHavysikkseiipiphssvlsnlaysknEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKnlcnngtgqsqyESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFkqenlsvagrdFKFTLIARRSRHYAGtrylkrgvnekgrvandveteqivvedvpegypmqISSVVQVrgsiplfwsqetswmnikpdiilskkdkkYEATRLHFENLAKRYGNPIIVLNLIktnekkpreTILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFycqvtpkpegllnlsciersdddypqnlshknedaetvdrevssgshvpsanlsikvpilqkgvlrtncidcldrtnvAQYAYGVVALGLQLKtlgllkspnigldnplakDLMGIYETMGDTLAlqyggsaahnKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLghfqpqqgkpalweldsdqhhiigihdpnviesak

matekwidfthqynpCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRlepselnivedsatysDFEYLDLLRRVHdgnrstgglklvtKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSikkseiipiphssvlsnLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFtliarrsrhyagtrylkrgvnekgrvandveteqivvedvpegyPMQISSVVQVRGSIPLFwsqetswmnikpdiilskKDKKYEATRLHFEnlakrygnpiIVLNliktnekkpreTILRAEFSNAIrfinkdlskenRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVssgshvpsanlsikvpilqkgVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIgihdpnviesak

MATEKWIDFTHQYNPCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVAlglqlktlgllkSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIGIHDPNVIESAK

****KWIDFTHQYNPCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCI***********************************LSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIGIHD********

***********QYNPCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYL**************GLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSV***********RYKKLLSSVDLTKDFFFSYSYNIMNSLQK***********YESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNE****ETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETV*****************KVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIF**************EFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIGIHDPNVIES**

MATEKWIDFTHQYNPCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSH******************PSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIGIHDPNVIESAK

***********QYNPCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAINALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDY****************************LSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIG***********

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		628	2.2.26 [Sep-21-2011]
Q91WF7		907	Polyphosphoinositide phos	yes	no	0.893	0.618	0.381	1e-113
Q92562		907	Polyphosphoinositide phos	yes	no	0.893	0.618	0.374	1e-112
P42837		879	Polyphosphoinositide phos	yes	no	0.851	0.608	0.350	5e-99
Q7Z9H9		832	Polyphosphoinositide phos	yes	no	0.826	0.623	0.357	9e-95
Q9W0I6		592	Phosphatidylinositide pho	no	no	0.694	0.736	0.297	8e-46
P32368		623	Phosphoinositide phosphat	no	no	0.713	0.719	0.267	7e-45
A1L244		586	Phosphatidylinositide pho	yes	no	0.694	0.744	0.274	2e-41
A4VCH0		586	Phosphatidylinositide pho	no	no	0.683	0.732	0.270	1e-39
Q6GM29		586	Phosphatidylinositide pho	N/A	no	0.692	0.742	0.267	3e-39
O14127		611	Uncharacterized protein C	no	no	0.695	0.715	0.277	2e-36

>sp\|Q91WF7\|FIG4_MOUSE Polyphosphoinositide phosphatase OS=Mus musculus GN=Fig4 PE=1 SV=1	Back alignment and function desciption

 Score =  410 bits (1054), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 245/643 (38%), Positives = 357/643 (55%), Gaps = 82/643 (12%)

Query: 18  LQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVH 77
           +QK  LYETR+ +++ G       +RVLKI R EP +L +++D   Y+  E  +LL R+ 
Sbjct: 12  VQKLVLYETRARYFLVGSNHAETKYRVLKIDRTEPKDLVVIDDRHVYTQQEVRELLGRLD 71

Query: 78  DGNRS------TGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSE 131
            GNR+      + GL      FG+VGF++FLE YY++L+T R+K+  I GHA+Y I+ + 
Sbjct: 72  LGNRTKMSQKGSSGLFRAVSAFGVVGFVRFLEGYYIVLITKRRKMADIGGHAIYKIEDTS 131

Query: 132 IIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLC-------- 183
           +I IP+ SV  +     +E RY ++  +VDL+ +F+FSYSY++ +SLQ NL         
Sbjct: 132 MIYIPNDSVRIS---HPDEARYLRIFQNVDLSSNFYFSYSYDLSHSLQYNLTVLRMPLEM 188

Query: 184 -----------------------NNGTG----QSQYESMFVWNHFLTRGIRNTLKNNQWT 216
                                    G+G     S+    +VWN  L   I+NT+  + W 
Sbjct: 189 LKSETSKACQESFDIFEDEGLITQGGSGVFGISSEPYMKYVWNGELLDIIKNTVHRD-WL 247

Query: 217 VALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVE 276
           + +++GF  Q  L + GR    TLIARRS  +AGTR+LKRG N +G VAN+VETEQI+ +
Sbjct: 248 LYIIHGFCGQSKLLIYGRPVYVTLIARRSSRFAGTRFLKRGANCEGDVANEVETEQILCD 307

Query: 277 DVPEGYPM-QISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKR 335
                +     SS VQVRGS+PLFWSQ+ S M  KP I L + D       LHF+ + +R
Sbjct: 308 ASVMSFTAGSYSSYVQVRGSVPLFWSQDISTMMPKPPITLDQADPFAHVAALHFDQMLQR 367

Query: 336 YGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR-KAI 394
           +G+PII+LNL+K  EK+  E IL  E   A+ ++N+ L  E+ + ++ +D+ K+++ K  
Sbjct: 368 FGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDMAKYTKSKLC 427

Query: 395 NALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDR 454
           N L  L       +  TG F      +P+   +   I R D+ +       NE       
Sbjct: 428 NVLDRLNVIAESVVKKTGFF----VNRPDSYCS---ILRPDEKW-------NE------- 466

Query: 455 EVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKS 514
               G HV      I    LQ G+LRTNC+DCLDRTN AQ+  G  AL  QL +LGL+  
Sbjct: 467 ---LGGHV------IPTGRLQTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLIDK 517

Query: 515 PNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERR-GQWRAATQSQEFLRTLQ 573
           PN+  D    +    +YE  GDTL+LQYGGS   +++   R+   W     S++ ++TL 
Sbjct: 518 PNLQFDTDAVRLFEELYEDHGDTLSLQYGGSQLVHRVKTYRKIAPW--TQHSKDIMQTLS 575

Query: 574 RYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSD--QHH 614
           RYYSN + DA++Q++IN+FLG F P +GKP LWEL +D   HH
Sbjct: 576 RYYSNAFSDADRQDSINLFLGVFHPTEGKPHLWELPTDFYLHH 618

The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). In vitro, hydrolyzes all three D5-phosphorylated polyphosphoinositide substrates in the order PtdIns(4,5)P2 > PtdIns(3,5)P2 > PtdIns(3,4,5)P3. Plays a role in the biogenesis of endosome carrier vesicles (ECV) / multivesicular bodies (MVB) transport intermediates from early endosomes.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: -

>sp\|Q92562\|FIG4_HUMAN Polyphosphoinositide phosphatase OS=Homo sapiens GN=FIG4 PE=1 SV=1	Back alignment and function description

>sp\|P42837\|FIG4_YEAST Polyphosphoinositide phosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FIG4 PE=1 SV=1	Back alignment and function description

>sp\|Q7Z9H9\|FIG4_SCHPO Polyphosphoinositide phosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1093.03 PE=3 SV=3	Back alignment and function description

>sp\|Q9W0I6\|SAC1_DROME Phosphatidylinositide phosphatase SAC1 OS=Drosophila melanogaster GN=Sac1 PE=2 SV=1	Back alignment and function description

>sp\|P32368\|SAC1_YEAST Phosphoinositide phosphatase SAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAC1 PE=1 SV=1	Back alignment and function description

>sp\|A1L244\|SAC1A_DANRE Phosphatidylinositide phosphatase SAC1-A OS=Danio rerio GN=sacm1la PE=2 SV=1	Back alignment and function description

>sp\|A4VCH0\|SAC1B_DANRE Phosphatidylinositide phosphatase SAC1-B OS=Danio rerio GN=sacm1lb PE=2 SV=2	Back alignment and function description

>sp\|Q6GM29\|SAC1_XENLA Phosphatidylinositide phosphatase SAC1 OS=Xenopus laevis GN=sacm1l PE=2 SV=1	Back alignment and function description

>sp\|O14127\|YF51_SCHPO Uncharacterized protein C3C7.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.01c PE=4 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		628
224119662		751	predicted protein [Populus trichocarpa]	0.974	0.814	0.724	0.0
359482963		818	PREDICTED: polyphosphoinositide phosphat	0.982	0.754	0.725	0.0
359482965		814	PREDICTED: polyphosphoinositide phosphat	0.982	0.757	0.721	0.0
224074083		828	predicted protein [Populus trichocarpa]	0.953	0.723	0.733	0.0
225444607		833	PREDICTED: polyphosphoinositide phosphat	0.955	0.720	0.722	0.0
224141557		737	predicted protein [Populus trichocarpa]	0.972	0.829	0.708	0.0
255550313		842	phosphoinositide 5-phosphatase, putative	0.957	0.713	0.699	0.0
356547980		813	PREDICTED: polyphosphoinositide phosphat	0.957	0.739	0.700	0.0
357479315		839	Polyphosphoinositide phosphatase [Medica	0.955	0.715	0.699	0.0
297742948		893	unnamed protein product [Vitis vinifera]	0.982	0.690	0.644	0.0

>gi\|224119662\|ref\|XP_002331215.1\| predicted protein [Populus trichocarpa] gi\|222873336\|gb\|EEF10467.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/616 (72%), Positives = 515/616 (83%), Gaps = 4/616 (0%)

Query: 17  FLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRV 76
           +LQKF LYETRSNFY+ G  K   LWRVLKI RLEPSEL ++EDS TYS+ E  DLLRR+
Sbjct: 19  YLQKFRLYETRSNFYMIGGDKNRTLWRVLKIDRLEPSELIVLEDSTTYSESECCDLLRRI 78

Query: 77  HDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIP 136
           H+GN+STGGLK VT C+GIVGFIKFL PYYMLL+T R+KIG ICGH +Y+I KSE+IPIP
Sbjct: 79  HEGNKSTGGLKFVTICYGIVGFIKFLGPYYMLLITKRRKIGAICGHTIYAITKSEMIPIP 138

Query: 137 HSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGTGQSQYESMF 196
           +S+V SN+  SKNE RYKKLL +VDLT+DFFFSYSYN+M+SLQKNL  N TGQ  YESMF
Sbjct: 139 NSTVRSNMTSSKNENRYKKLLCTVDLTRDFFFSYSYNVMHSLQKNLSFNETGQIHYESMF 198

Query: 197 VWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKR 256
           VWN FLT+GIRN LKN  WTVALV+GFFKQ  +SV+GR+FK  LIARRSRHYAGTRYLKR
Sbjct: 199 VWNEFLTQGIRNNLKNTLWTVALVHGFFKQVKISVSGREFKLALIARRSRHYAGTRYLKR 258

Query: 257 GVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILS 316
           GVNEKGRVANDVETEQ+V EDV E  P+QISSVVQ RGSIPLFWSQE+S +N+KPDI+LS
Sbjct: 259 GVNEKGRVANDVETEQVVFEDVSEEQPVQISSVVQNRGSIPLFWSQESSRLNLKPDIMLS 318

Query: 317 KKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKE 376
           +KD+ +EAT+LHFENL KRYGNPII+LNLIK++EKKPRETIL AEF+NAIR IN+ LS+E
Sbjct: 319 RKDQNFEATKLHFENLVKRYGNPIIILNLIKSHEKKPRETILGAEFANAIRVINQSLSEE 378

Query: 377 NRLKFLSYDLQKHSR-KAINALQILGRAGAYALSLTGIFYCQVTP--KPEGLLNLSCIER 433
           NRLKFL +DL KHSR +A N L +LGR  AYAL+LTGIFYCQV P    +GLLN SC E 
Sbjct: 379 NRLKFLHWDLNKHSRNRATNVLALLGRVTAYALNLTGIFYCQVMPSSSSKGLLNGSCFEE 438

Query: 434 SDDDYP-QNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNV 492
            D D   +NLS++N +   +D E++      + N SIKVP+ Q GVLRTNCIDCLDRTNV
Sbjct: 439 HDGDCSLENLSNENGNVGKLDSEITKADCDANRNQSIKVPMFQNGVLRTNCIDCLDRTNV 498

Query: 493 AQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIF 552
           AQYAYG+VALG QL  LG ++ PNI LDNPLA+DLM IYETMGDTLALQYGGSAAHNKIF
Sbjct: 499 AQYAYGLVALGHQLHALGYMEYPNIDLDNPLAEDLMRIYETMGDTLALQYGGSAAHNKIF 558

Query: 553 CERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQ 612
            ERRGQW+AAT SQEF RTLQRYYSN Y+DAEKQ+AINVFLGHFQPQQGKPALWELDSDQ
Sbjct: 559 SERRGQWKAATHSQEFFRTLQRYYSNAYMDAEKQDAINVFLGHFQPQQGKPALWELDSDQ 618

Query: 613 HHIIGIHDPNVIESAK 628
           H+ +G   P+++E A+
Sbjct: 619 HYDVGRRGPDLVEHAR 634

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359482963\|ref\|XP_003632867.1\| PREDICTED: polyphosphoinositide phosphatase-like isoform 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359482965\|ref\|XP_003632868.1\| PREDICTED: polyphosphoinositide phosphatase-like isoform 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224074083\|ref\|XP_002304245.1\| predicted protein [Populus trichocarpa] gi\|222841677\|gb\|EEE79224.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225444607\|ref\|XP_002277404.1\| PREDICTED: polyphosphoinositide phosphatase [Vitis vinifera] gi\|297738507\|emb\|CBI27752.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224141557\|ref\|XP_002324135.1\| predicted protein [Populus trichocarpa] gi\|222865569\|gb\|EEF02700.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|255550313\|ref\|XP_002516207.1\| phosphoinositide 5-phosphatase, putative [Ricinus communis] gi\|223544693\|gb\|EEF46209.1\| phosphoinositide 5-phosphatase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356547980\|ref\|XP_003542382.1\| PREDICTED: polyphosphoinositide phosphatase-like [Glycine max]	Back alignment and taxonomy information

>gi\|357479315\|ref\|XP_003609943.1\| Polyphosphoinositide phosphatase [Medicago truncatula] gi\|355510998\|gb\|AES92140.1\| Polyphosphoinositide phosphatase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297742948\|emb\|CBI35815.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		628
TAIR\|locus:505006345		808	AT3G14205 "AT3G14205" [Arabido	0.976	0.758	0.680	1.6e-221
TAIR\|locus:2147082		831	AT5G20840 "AT5G20840" [Arabido	0.944	0.713	0.636	9.1e-203
TAIR\|locus:2084711		818	AT3G43220 "AT3G43220" [Arabido	0.944	0.724	0.636	9.4e-201
TAIR\|locus:2009477		912	ATSAC1 "AT1G22620" [Arabidopsi	0.958	0.660	0.533	3.8e-172
TAIR\|locus:2029105		785	AT1G17340 "AT1G17340" [Arabido	0.923	0.738	0.546	3.6e-169
DICTYBASE\|DDB_G0281427		1391	DDB_G0281427 "Polyphosphoinosi	0.702	0.317	0.364	1.3e-105
UNIPROTKB\|E1C9A9		910	FIG4 "Uncharacterized protein"	0.374	0.258	0.394	7.5e-101
MGI\|MGI:2143585		907	Fig4 "FIG4 homolog (S. cerevis	0.359	0.249	0.402	6e-99
UNIPROTKB\|Q1RMU9		907	FIG4 "FIG4 homolog (S. cerevis	0.377	0.261	0.397	2.5e-98
UNIPROTKB\|J9NVC3		907	FIG4 "Uncharacterized protein"	0.359	0.249	0.398	3.8e-98

TAIR\|locus:505006345 AT3G14205 "AT3G14205" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2139 (758.0 bits), Expect = 1.6e-221, P = 1.6e-221
 Identities = 421/619 (68%), Positives = 490/619 (79%)

Query:     2 ATEKWIDFTHQYNPCFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDS 61
             A+E+ ID        FLQKF LYETRS+FY+ GR K    WRVLK+ R EP+E+NI EDS
Sbjct:     3 ASERSIDKEVDMGSSFLQKFRLYETRSSFYMIGRDKNRTSWRVLKLDRTEPAEVNIYEDS 62

Query:    62 ATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICG 121
               Y++ E  + LRR+H+GNRS+GGLK VT C+GI+GFI+FL PYYML++T RKK+G ICG
Sbjct:    63 TAYTEAECFETLRRIHEGNRSSGGLKFVTTCYGIIGFIRFLGPYYMLIITKRKKLGEICG 122

Query:   122 HAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKN 181
             H VY + KS+II IPH+SVLSN+AYSK+EKRYK+LL +VDLTKDFFFSYSY+IM++LQ+N
Sbjct:   123 HTVYGVAKSKIITIPHASVLSNVAYSKDEKRYKRLLCTVDLTKDFFFSYSYHIMHTLQRN 182

Query:   182 LCNNGTGQSQYESMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLI 241
             L NN  G + YESMFVWN +LTR IRN +K+  WTVALVYGFFKQ  LSV+ ++F+ TLI
Sbjct:   183 LSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVALVYGFFKQVKLSVSEKNFRLTLI 242

Query:   242 ARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWS 301
             +RRSRHYAGTRYLKRGVNEKGRVANDVETEQIV E+  +G P +ISSVVQ RGSIPLFWS
Sbjct:   243 SRRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFEEAQDGNPGRISSVVQNRGSIPLFWS 302

Query:   302 QETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAE 361
             QETS +NIKPDIILS KD  +EATRLHFENL +RYGNPII+LNLIKT EK+PRETILRAE
Sbjct:   303 QETSRLNIKPDIILSPKDPNFEATRLHFENLGRRYGNPIIILNLIKTREKRPRETILRAE 362

Query:   362 FSNAIRFINKDLSKENRLKFLSYDLQKHSRK-AINALQILGRAGAYALSLTGIFYCQVTP 420
             F+NAIRFINK LSKE+RL+ L +DL KHSRK   N L ILGR   YAL+LT IFYCQ+TP
Sbjct:   363 FANAIRFINKGLSKEDRLRPLHWDLHKHSRKKGTNVLAILGRLATYALNLTSIFYCQLTP 422

Query:   421 --KPEGLLNL--SCIERSDDDYPQ-NLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQ 475
               + EG  N   S +E  D +    +   K+E A  +  E  + S     +   +V +LQ
Sbjct:   423 DLRGEGFQNQNPSTLENDDGECSTYDPPSKDETAPNLVVENGNDSKDAKEDQQKEVTMLQ 482

Query:   476 KGVLRTNCIDCLDRTNVAQYAYGVVAXXXXXXXXXXXXSPNIGLDNPLAKDLMGIYETMG 535
             KGVLRTNCIDCLDRTNVAQYAYG+VA            S NI LDNPLA+DLMGIYETMG
Sbjct:   483 KGVLRTNCIDCLDRTNVAQYAYGLVAFGRQLHALGLTESTNIDLDNPLAEDLMGIYETMG 542

Query:   536 DTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLGH 595
             DTLALQYGGSAAHNKIFCERRGQWRAATQSQEF RTLQRYYSN Y+DAEKQ+AINVFLG+
Sbjct:   543 DTLALQYGGSAAHNKIFCERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLGY 602

Query:   596 FQPQQGKPALWELDSDQHH 614
             FQPQ  KPALWEL SDQH+
Sbjct:   603 FQPQSDKPALWELGSDQHY 621

GO:0004439 "phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0042578 "phosphoric ester hydrolase activity" evidence=IEA

GO:0032957 "inositol trisphosphate metabolic process" evidence=RCA

GO:0046855 "inositol phosphate dephosphorylation" evidence=RCA

TAIR\|locus:2147082 AT5G20840 "AT5G20840" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2084711 AT3G43220 "AT3G43220" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2009477 ATSAC1 "AT1G22620" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029105 AT1G17340 "AT1G17340" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0281427 DDB_G0281427 "Polyphosphoinositide phosphatase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C9A9 FIG4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

MGI\|MGI:2143585 Fig4 "FIG4 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q1RMU9 FIG4 "FIG4 homolog (S. cerevisiae)" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|J9NVC3 FIG4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_III0504	hypothetical protein (828 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		628
pfam02383		298	pfam02383, Syja_N, SacI homology domain	1e-105
COG5329		570	COG5329, COG5329, Phosphoinositide polyphosphatase	6e-54
COG5329		570	COG5329, COG5329, Phosphoinositide polyphosphatase	4e-22

>gnl\|CDD\|217007 pfam02383, Syja_N, SacI homology domain	Back alignment and domain information

 Score =  319 bits (821), Expect = e-105
 Identities = 110/307 (35%), Positives = 172/307 (56%), Gaps = 20/307 (6%)

Query: 92  CFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAY-SKNE 150
            +GI+G I+ L   Y++++T   K+G I GH +Y I   E IP+  S   S      K+E
Sbjct: 1   IYGILGLIRLLGGSYLIVITKASKVGTIRGHTIYKITSVEFIPLNSSEYDSESDKKEKDE 60

Query: 151 KRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNLCNNGT-GQSQYESMFVWNHFLTRGIRNT 209
           + Y KLL  +  +  F+FSY Y++ NSLQ+   ++ +    + +  FVWN +L + + + 
Sbjct: 61  EHYLKLLKKLLSSGSFYFSYDYDLTNSLQRRGLSSSSPLWKRADDRFVWNSYLLKPLIDF 120

Query: 210 LKNN-QWTVALVYGFFKQENLSVAG--RDFKFTLIARRSRHYAGTRYLKRGVNEKGRVAN 266
             +   W + L+ GF +Q  +SV G  +    TLI+RRSR  AGTRY +RG+++ G VAN
Sbjct: 121 RSDLSDWLLPLIQGFVEQRTISVNGEGKKVTLTLISRRSRKRAGTRYNRRGIDDDGNVAN 180

Query: 267 DVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDI-ILSKKDKKYEAT 325
            VETEQIV +D       +I S VQ+RGS+PLFW Q+ + +  KP I I    +    A 
Sbjct: 181 FVETEQIVSDD-----SGRIFSFVQIRGSVPLFWEQDPN-LKYKPKIKITRSSEATQPAF 234

Query: 326 RLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYD 385
             HF++L KRYG PI ++NL+   +KK  E  L   +  AI ++N++     ++K+  +D
Sbjct: 235 DKHFDDLIKRYG-PIYIVNLL---DKKGSEKKLSEAYEEAINYLNEN----KKIKYTWFD 286

Query: 386 LQKHSRK 392
                + 
Sbjct: 287 FHAECKG 293

This Pfam family represents a protein domain which shows homology to the yeast protein SacI. The SacI homology domain is most notably found at the amino terminal of the inositol 5'-phosphatase synaptojanin. Length = 298

>gnl\|CDD\|227637 COG5329, COG5329, Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]	Back alignment and domain information

>gnl\|CDD\|227637 COG5329, COG5329, Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		628
KOG1888		868	consensus Putative phosphoinositide phosphatase [L	100.0
KOG1889		579	consensus Putative phosphoinositide phosphatase [L	100.0
COG5329		570	Phosphoinositide polyphosphatase (Sac family) [Sig	100.0
KOG1890		949	consensus Phosphoinositide phosphatase SAC1 [Lipid	100.0
KOG0566		1080	consensus Inositol-1,4,5-triphosphate 5-phosphatas	100.0
PF02383		319	Syja_N: SacI homology domain; InterPro: IPR002013	100.0

>KOG1888 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=1.1e-153  Score=1257.27  Aligned_cols=575  Identities=56%  Similarity=0.901  Sum_probs=530.3

Q ss_pred             cceeEEEEEeeCCEEEEEeecCCCCceEEEEEeCCCCCccceeccccccChHHHHHHHhhhhcCCCccCCcceeeeeeee
Q 006853           16 CFLQKFTLYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGI   95 (628)
Q Consensus        16 ~~~~~~~Lyet~~~fyi~~~~~~~~~~~vL~IdR~~~~~l~i~ed~~~~~~~e~~~lL~~i~~~~~~~g~~~~~~~~~Gi   95 (628)
                      +.++++.||||+++|||+|+|+.++.||||+|||++|.+|++.||..+|+.+|+.++|..|++||+++||+++++.+|||
T Consensus        13 Ss~~k~~lyETrar~YlIGsn~s~t~yrVLkIDrt~p~~Lni~ed~~~yt~~Ei~elL~~i~~g~~~tgGl~~~t~ayGI   92 (868)
T KOG1888|consen   13 SSLQKFVLYETRARFYLIGSNNSETRYRVLKIDRTEPSELNISEDSVVYTSEEIRELLARISEGNRATGGLKKVTSAYGI   92 (868)
T ss_pred             cceeEEEEEEecceEEEEeecCCCceEEEEEeccCCchhhccCCCccccCHHHHHHHHHHHhcCCccCCceeeeeeeeee
Confidence            34699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCCeEEEEEeCeeEeEEeCCeeEEEeeeeeEeecCCCCcccccccchhHHHHHHHhhcCCCCCceEEecccccc
Q 006853           96 VGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIM  175 (628)
Q Consensus        96 lG~i~l~~~~yL~vIt~~~~Vg~i~gh~Iy~I~~~~~i~l~~~~~~~~~~~~~~e~~~~~ll~~~~~~~~fYfS~tyDLT  175 (628)
                      ||+++|++++|||+||+++.||.|+||.||+|.+++||||++..++.   ++++|++++++++++|++++|||||+||||
T Consensus        93 lGfvkFle~YYLlliTkr~~ia~iggH~VY~I~es~mI~I~~~~vq~---~~~~e~r~~r~fq~vDLt~~FYFSYSYdit  169 (868)
T KOG1888|consen   93 LGFVKFLEGYYLLLITKRRQIADIGGHAVYTIDESQMIPIPNDTVQP---NHANEARYLRYFQNVDLTKDFYFSYSYDIT  169 (868)
T ss_pred             eeEEEecCceEEEEEEcccccccccCceeEEEccceEEEccCCCcCC---CCccHHHHHHHHhhcccccceeEEeehhhh
Confidence            99999999999999999999999999999999999999999987654   368899999999999999999999999999


Q ss_pred             ccccccccCCCCCCCccc-----cccccchhhhHHHHhhccCCCeeEEeeeeeeEeeeeeeecceeEEEEEEeeeccccC
Q 006853          176 NSLQKNLCNNGTGQSQYE-----SMFVWNHFLTRGIRNTLKNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAG  250 (628)
Q Consensus       176 ~slQ~~~~~~~~~~~~~d-----~rF~WN~~L~~~~~~~~~~~~w~~plI~Gfv~~~~~~~~~~~~~~~LISRRS~~raG  250 (628)
                      +|||.|......+...++     .+||||.+|++|++..+....|++.|+||||+|..+.+.|+.+.+|||+|||+++||
T Consensus       170 rslQ~N~~~~~~~~~~~~~~~~~~~FVWN~~Ll~pir~~~~~~~W~v~lvhGf~~Q~~lsi~Gr~~~vtLiARRSr~fAG  249 (868)
T KOG1888|consen  170 RSLQKNILRSRLGGPDYEKLEADEMFVWNSFLLQPIRSILLNTDWTVALVHGFFKQSPLSISGRDFYVTLIARRSRHFAG  249 (868)
T ss_pred             hhhcccccccccCCcchhhhcccceeEehHhHhHHHHHhccchhHHHHHHhhhhccceehhcCceeEEEEEEeccccccc
Confidence            999999876654444443     589999999999999876669999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCccceeeeEeEEEEecCCCCCcceEEEEEEEecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHH
Q 006853          251 TRYLKRGVNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFE  330 (628)
Q Consensus       251 TRy~~RGid~~G~VANfVETEqIv~~~~~~~~~~~~~SfVQiRGSVPlfW~Q~~~~l~~kp~i~~~~~d~~~~a~~~HF~  330 (628)
                      |||++||+|..|+|||+|||||||++...+...++++||||.|||||+||+|+.+.+.+||+|.+...||++++...||+
T Consensus       250 TRfLKRG~N~~G~VANeVETEQIV~d~~~~~~~~~~sS~VQ~RGSIPl~WsQd~S~~~~KP~I~l~~~DP~y~~a~lHF~  329 (868)
T KOG1888|consen  250 TRFLKRGANSCGDVANEVETEQIVSDDVPGFHAGRISSFVQMRGSIPLFWSQDASRMVPKPDIVLDKRDPFYETAALHFD  329 (868)
T ss_pred             chHHhccCCCCCCcccceeeeeeEecCcCCCCccceeeeeeccccccceeccchhhcCCCCCeEEeccCCccchHHHHHH
Confidence            99999999999999999999999999976667889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc-ccccHHHHHHHHHHhhhh
Q 006853          331 NLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR-KAINALQILGRAGAYALS  409 (628)
Q Consensus       331 ~L~~~YG~pv~vvNLl~~~~~k~~E~~L~~~f~~~v~~ln~~l~~~~~i~y~~fDfh~~~k-k~~n~l~~l~~~~~~~l~  409 (628)
                      +|.+|||.||+|+||||.+|++++|.+|.++|+++|++||++||++++++|++||||+..| +..|++..|+.+|+.++.
T Consensus       330 ~L~~RYG~PIiilNLIKt~ekr~~E~IL~~eF~~ai~yLNqflp~e~rl~~i~wD~hk~~Ks~~~nVle~L~~~a~~~v~  409 (868)
T KOG1888|consen  330 NLVQRYGNPIIILNLIKTNEKRPRESILREEFENAIDYLNQFLPPENRLKYIHWDMHKHSKSKGQNVLEVLEKVAESAVM  409 (868)
T ss_pred             HHHHhcCCcEEEEEeeccccCCchhHHHHHHHHHHHHHHhccCCCcceeeeeechHHhhhccCcccHHHHHHHHHhhhHh
Confidence            9999999999999999999999999999999999999999999999999999999999999 999999999999999999


Q ss_pred             hcceeeeccCCCcCcccccccccCCCCCCCcccCCCCccccccccccCCCCCCCCCCcCCCcceeeeeEEeeecCccchh
Q 006853          410 LTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDR  489 (628)
Q Consensus       410 ~~gff~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~GV~RtNClDCLDR  489 (628)
                      .+|+|+..  |..+.....++.-              +..+..           .+  ..+..+.|+||+||||+|||||
T Consensus       410 ~tG~f~~~--~~~~~~~~~~~~~--------------~~~dd~-----------~g--~~~~~rlQ~GIlRtNCiDCLDR  460 (868)
T KOG1888|consen  410 LTGIFFNM--PLRDSLKLSPSPH--------------ESADDI-----------EG--DVKPPRLQSGILRTNCIDCLDR  460 (868)
T ss_pred             hhceeecc--cchhhhhcCCCcc--------------cccccc-----------cc--cccchhhcccceeccchhhccc
Confidence            99999862  1111111111100              001100           01  1356789999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHHHHHHHhhhHhHhhhcCCccccceeeeeccccccccchHHHH
Q 006853          490 TNVAQYAYGVVALGLQLKTLGLLKSPNIGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFL  569 (628)
Q Consensus       490 TNv~Q~~i~~~~L~~qL~~lgi~~~~~~~~~~~~~~~~~~lw~~~GD~iS~qYaGT~Alk~~~t~r~gk~~~~~~~~D~~  569 (628)
                      |||+||++|++||++||++|||++.|.++++++++..|++||.+|||++|+||+||+|+++.+| +++.|.+..+++|++
T Consensus       461 TN~AQf~~Gk~ALg~QL~~LGi~D~p~lelDs~~v~~L~dLye~~GDtlAlQYgGS~lvh~v~t-yrk~~~~s~~srd~~  539 (868)
T KOG1888|consen  461 TNVAQFAIGKAALGCQLHALGISDKPNLELDSDIVSLLEDLYEEHGDTLALQYGGSQLVHSVKT-YRKTAQWSTQSRDFL  539 (868)
T ss_pred             ccHHHHHHHHHHHHHHHHHccCccCcccccCcHHHHHHHHHHHHhhhHHHHHhchhhhhhhhhh-hhhhhhhhhHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 678888899999999


Q ss_pred             HHHHHHHhhccCChhhHHHHHHHhcCcCCCCCCCcccccCCCcccccCCCCCCc
Q 006853          570 RTLQRYYSNTYVDAEKQNAINVFLGHFQPQQGKPALWELDSDQHHIIGIHDPNV  623 (628)
Q Consensus       570 ~S~~Ryy~NnF~D~~kQ~aidL~LG~~~~~~~~~~~~~l~~d~~lh~~~~~~~~  623 (628)
                      .+++|||+|.|.|++||+|||||||.|.|.+++|+||||.||||||+..-....
T Consensus       540 ~TL~RyYsNaf~D~dkQdaINLFLG~f~P~~g~p~LWel~sD~~lH~~~~l~~~  593 (868)
T KOG1888|consen  540 QTLSRYYSNAFVDADKQDAINLFLGVFRPSEGKPALWELRSDYYLHVAGSLREI  593 (868)
T ss_pred             HHHHHHHhhccccHHHHHHHHHHhccccccCCCCccccccccHHHhccccccCC
Confidence            999999999999999999999999999999999999999999999998766544

>KOG1889 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]	Back alignment and domain information

>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]	Back alignment and domain information

>KOG1890 consensus Phosphoinositide phosphatase SAC1 [Lipid transport and metabolism]	Back alignment and domain information

>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF02383 Syja_N: SacI homology domain; InterPro: IPR002013 Synaptic vesicles are recycled with remarkable speed and precision in nerve terminals	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		628
3lwt_X		505	Crystal Structure Of The Yeast Sac1: Implications F		8e-43

>pdb|3LWT|X Chain X, Crystal Structure Of The Yeast Sac1: Implications For Its Phosphoinositide Phosphatase Function Length = 505

Back alignment and structure

Iteration: 1

Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 136/515 (26%), Positives = 231/515 (44%), Gaps = 72/515 (13%) Query: 89 VTKCFGIVGFIKFLEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSK 148 V K ++GFIK Y ++ ++ G GH Y + + I+ +S + + Sbjct: 53 VVKIASLMGFIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDS----- 107 Query: 149 NEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKN-LCNNGTGQSQYESMFVWNHFLTRGIR 207 E Y KLL F+FSY+Y++ NSLQ+N + F WNH+LT +R Sbjct: 108 EEAEYIKLLELHLKNSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLR 167 Query: 208 NTLKNN----QWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGR 263 N + + ++YG+ K + + LI RRS AGTRY +RGV++ G Sbjct: 168 NFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGN 227 Query: 264 VANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYE 323 V N ETEQI++ + PE + + S +Q RGS+P++W+ E + + KP+++L + + Sbjct: 228 VGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWA-EINNLKYKPNLVLG--ENSLD 284 Query: 324 ATRLHFENLAKRYGNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLS 383 AT+ HF+ + YG+ +V NL+ +K E ++ + + + +N + ++ ++ Sbjct: 285 ATKKHFDQQKELYGDNYLV-NLVN---QKGHELPVKEGYESVVHALN-----DPKIHYVY 335 Query: 384 YDLQKHSRKA-INALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNL 442 +D RK + +++L D+ + L Sbjct: 336 FDFHHECRKMQWHRVKLL-----------------------------------IDHLEKL 360 Query: 443 SHKNED--AETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVV 500 NED + +D S+G+ V N Q V+RTNC+DCLDRTNV Q Sbjct: 361 GLSNEDFFHKVID---SNGNTVEIVN-------EQHSVVRTNCMDCLDRTNVVQSVLAQW 410 Query: 501 AXXXXXXXXXXXXSPNIGLDN-PLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQW 559 + + DN PL ++ D +++ Y G+ A F R G+ Sbjct: 411 VLQKEFESADVVATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFT-RTGKR 469 Query: 560 RAATQSQEFLRTLQRYYSNTYVDAEKQNAINVFLG 594 +FL + RYY N + D +Q++ ++FLG Sbjct: 470 TRLGAFNDFLNSASRYYQNNWTDGPRQDSYDLFLG 504

PyMOL of 3lwt

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		628
3lwt_X		505	Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipi	1e-119
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07

>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae} Length = 505	Back alignment and structure

 Score =  361 bits (928), Expect = e-119
 Identities = 133/561 (23%), Positives = 234/561 (41%), Gaps = 76/561 (13%)

Query: 47  IYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKL-----VTKCFGIVGFIKF 101
           +Y      +         ++   + L      G R  G  +      V K   ++GFIK 
Sbjct: 7   VYVQNADGIFFKLAEGKGTNDAVIHL-ANQDQGVRVLGAEEFPVQGEVVKIASLMGFIKL 65

Query: 102 LEPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVD 161
               Y ++    ++ G   GH  Y + +  I+    +S          E  Y KLL    
Sbjct: 66  KLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNS-----RIDSEEAEYIKLLELHL 120

Query: 162 LTKDFFFSYSYNIMNSLQKNLC-NNGTGQSQYESMFVWNHFLTRGIRNTLKNN----QWT 216
               F+FSY+Y++ NSLQ+N            +  F WNH+LT  +RN    +     + 
Sbjct: 121 KNSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFI 180

Query: 217 VALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVVE 276
             ++YG+ K  +  +        LI RRS   AGTRY +RGV++ G V N  ETEQI++ 
Sbjct: 181 QPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLA 240

Query: 277 DVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRY 336
           + PE   + + S +Q RGS+P++W++  + +  KP+++L   +   +AT+ HF+   + Y
Sbjct: 241 ENPESEKIHVFSFLQTRGSVPIYWAE-INNLKYKPNLVLG--ENSLDATKKHFDQQKELY 297

Query: 337 GNPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSRKAI-- 394
           G+  +V NL+    +K  E  ++  + + +  +N       ++ ++ +D     RK    
Sbjct: 298 GDNYLV-NLV---NQKGHELPVKEGYESVVHALNDP-----KIHYVYFDFHHECRKMQWH 348

Query: 395 NALQILGRAGAYALSLTGIFYCQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDR 454
               ++       LS    F+  +      +                             
Sbjct: 349 RVKLLIDHLEKLGLSNEDFFHKVIDSNGNTV----------------------------- 379

Query: 455 EVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQYAYGVVALGLQLKTLGLLKS 514
                          ++   Q  V+RTNC+DCLDRTNV Q       L  + ++  ++ +
Sbjct: 380 ---------------EIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADVVAT 424

Query: 515 PNIGLDN-PLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQ 573
            +   DN PL      ++    D +++ Y G+ A    F  R G+        +FL +  
Sbjct: 425 GSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFT-RTGKRTRLGAFNDFLNSAS 483

Query: 574 RYYSNTYVDAEKQNAINVFLG 594
           RYY N + D  +Q++ ++FLG
Sbjct: 484 RYYQNNWTDGPRQDSYDLFLG 504

PyMOL of 3lwt

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		628
3lwt_X		505	Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipi	100.0

>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}	Back alignment and structure

Probab=100.00  E-value=2e-131  Score=1091.15  Aligned_cols=490  Identities=26%  Similarity=0.478  Sum_probs=378.8

Q ss_pred             EEeeCCEEEEEeecCCCCceEEEEEeCCCCCccceeccccccChHHHHHHHhhhhcCCCccCCcceeeeeeeeEEEEEec
Q 006853           23 LYETRSNFYICGRYKKTNLWRVLKIYRLEPSELNIVEDSATYSDFEYLDLLRRVHDGNRSTGGLKLVTKCFGIVGFIKFL  102 (628)
Q Consensus        23 Lyet~~~fyi~~~~~~~~~~~vL~IdR~~~~~l~i~ed~~~~~~~e~~~lL~~i~~~~~~~g~~~~~~~~~GilG~i~l~  102 (628)
                      .-+||++|||+|+++....-.+|.|||.++ ++.+.+...             ++    ..   ..+++++||||+|+|.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~l~i~r~~~-~~~~~~~~~-------------~~----~~---~~~~~i~GilG~i~l~   66 (505)
T 3lwt_X            8 YVQNADGIFFKLAEGKGTNDAVIHLANQDQ-GVRVLGAEE-------------FP----VQ---GEVVKIASLMGFIKLK   66 (505)
T ss_dssp             EEEETTEEEEEESSCCSSCCCEEEEETTTC-CEEEECGGG-------------SC----SS---SCCEEESEEEEEEEET
T ss_pred             EEECCCEEEEEECCCCCCCcceEEEEcCCC-eEEeccccc-------------CC----Cc---CceeEEEEEEEEEEEC
Confidence            456999999999874222237999999998 566553211             11    01   1267899999999999


Q ss_pred             CCeEEEEEeCeeEeEEeCCeeEEEeeeeeEeecCCCCcccccccchhHHHHHHHhhcCCCCCceEEeccccccccccccc
Q 006853          103 EPYYMLLVTGRKKIGVICGHAVYSIKKSEIIPIPHSSVLSNLAYSKNEKRYKKLLSSVDLTKDFFFSYSYNIMNSLQKNL  182 (628)
Q Consensus       103 ~~~yL~vIt~~~~Vg~i~gh~Iy~I~~~~~i~l~~~~~~~~~~~~~~e~~~~~ll~~~~~~~~fYfS~tyDLT~slQ~~~  182 (628)
                      +++||+|||+++.||.|+||.||+|++++|||++.+.     ..+++|.+|+++|+.++++++|||||+||||+++|++.
T Consensus        67 ~~~YlivIT~~~~vg~i~gh~Iy~I~~~~~ipl~~~~-----~~~~~E~~yl~ll~~~l~s~~FYfS~~yDLT~slQ~~~  141 (505)
T 3lwt_X           67 LNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNS-----RIDSEEAEYIKLLELHLKNSTFYFSYTYDLTNSLQRNE  141 (505)
T ss_dssp             TEEEEEEEEEEEEEEEETTEEEEEEEEEEEEESCTTC-----CCCHHHHHHHHHHHHHHHHCCCEECSSSCTTSCHHHHH
T ss_pred             CCcEEEEEEccEEEEEECCeEEEEEEEEEEEEecCcc-----ccChhHHHHHHHHHHHhcCCCEEEeCCcCCCcchhhcc
Confidence            9999999999999999999999999999999999542     34689999999999999999999999999999999986


Q ss_pred             cCCC-CCCCccccccccchhhhHHHHhhc----cCCCeeEEeeeeeeEeeeeeeecceeEEEEEEeeeccccCccccccc
Q 006853          183 CNNG-TGQSQYESMFVWNHFLTRGIRNTL----KNNQWTVALVYGFFKQENLSVAGRDFKFTLIARRSRHYAGTRYLKRG  257 (628)
Q Consensus       183 ~~~~-~~~~~~d~rF~WN~~L~~~~~~~~----~~~~w~~plI~Gfv~~~~~~~~~~~~~~~LISRRS~~raGTRy~~RG  257 (628)
                      .... ..+..+|++|+||++|+++|++..    +...|++|+|||||++..+.+.++.+.+||||||||+||||||++||
T Consensus       142 ~~~~~~~~~~~d~~F~WN~~l~~~l~~~~~~~~~~~~~~~piI~Gfv~~~~~~~~~~~~~~tLISRRS~~raGtRy~~RG  221 (505)
T 3lwt_X          142 KVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRG  221 (505)
T ss_dssp             HHCSCCCGGGSCTTTCTTTGGGHHHHHHHTTCGGGGGGCCCCBSSEEEEEEEEETTEEEEEEEEEEECCCCCSSSCCSSS
T ss_pred             ccCccccccCCCCceechHHHHHHHHHhcccCcchhhhhhHhhcCceEEEEEEECCceEEEEEEEEEecccCCccccccC
Confidence            5332 345567999999999999998642    23589999999999999999999999999999999999999999999


Q ss_pred             CCCCCccceeeeEeEEEEecCCCCCcceEEEEEEEecCcceeeeecCCCCCcccceEEcCCCCchHHHHHHHHHHHHHhC
Q 006853          258 VNEKGRVANDVETEQIVVEDVPEGYPMQISSVVQVRGSIPLFWSQETSWMNIKPDIILSKKDKKYEATRLHFENLAKRYG  337 (628)
Q Consensus       258 id~~G~VANfVETEqIv~~~~~~~~~~~~~SfVQiRGSVPlfW~Q~~~~l~~kp~i~~~~~d~~~~a~~~HF~~L~~~YG  337 (628)
                      ||++|||||||||||||+.+...+.+..++||||+||||||||+|.+ .+.+||+|.+.  +++++||.+||++|.++||
T Consensus       222 idd~G~VANfVETEqIv~~~~~~~~~~~~~SfvQiRGSVPlfW~Q~~-~l~~kP~i~i~--~~~~~a~~kHF~~L~~~YG  298 (505)
T 3lwt_X          222 VDKDGNVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEIN-NLKYKPNLVLG--ENSLDATKKHFDQQKELYG  298 (505)
T ss_dssp             BCTTSCCSCEEEEEEEEEEECTTTCCEEEEEEEEEEECCCSBSCCCC-CSSSCCCCCCC--HHHHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCccceeeEEEEEEeCCCCCCCccEEEEEEeccccCceeeecC-CcCcCCCeeec--CchHHHHHHHHHHHHHHhC
Confidence            99999999999999999987543334489999999999999999976 68899999885  4599999999999999999


Q ss_pred             CcEEEEecccCCCCCcccchHHHHHHHHHHHHhhcCCCCCCeeEEEeecccccc--ccccHHHHHHHHHHhhhhhcceee
Q 006853          338 NPIIVLNLIKTNEKKPRETILRAEFSNAIRFINKDLSKENRLKFLSYDLQKHSR--KAINALQILGRAGAYALSLTGIFY  415 (628)
Q Consensus       338 ~pv~vvNLl~~~~~k~~E~~L~~~f~~~v~~ln~~l~~~~~i~y~~fDfh~~~k--k~~n~l~~l~~~~~~~l~~~gff~  415 (628)
                      . ++|||||+++   ++|.+|+++|+++|+++|+     ++|+|++||||++||  +..++..+++.+++..++..|||+
T Consensus       299 ~-~~iVNLl~~k---~~E~~L~~~y~~~v~~l~~-----~~i~y~~fDfh~~~k~~~~~~v~~ll~~l~~~~~~~~g~f~  369 (505)
T 3lwt_X          299 D-NYLVNLVNQK---GHELPVKEGYESVVHALND-----PKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLGLSNEDFFH  369 (505)
T ss_dssp             E-EEEEEECCCS---SCCCHHHHHHHHHHHHHCC-----TTEEEEEECCCSSTTTHHHHHHHHHHHHHHHHTCCTTCSEE
T ss_pred             C-cEEEecccCC---CchhHHHHHHHHHHHHhcc-----cCCceEEecchHhhhccchhHHHHHHHHHHHhcccccCceE
Confidence            8 5689999975   4599999999999999974     579999999999999  556777788888877788889998


Q ss_pred             eccCCCcCcccccccccCCCCCCCcccCCCCccccccccccCCCCCCCCCCcCCCcceeeeeEEeeecCccchhhhHHHH
Q 006853          416 CQVTPKPEGLLNLSCIERSDDDYPQNLSHKNEDAETVDREVSSGSHVPSANLSIKVPILQKGVLRTNCIDCLDRTNVAQY  495 (628)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~GV~RtNClDCLDRTNv~Q~  495 (628)
                      ....+.                                           + ..+++...|+||+|||||||||||||||+
T Consensus       370 ~~~~~~-------------------------------------------g-~~~~~~~~Q~GV~RtNCiDCLDRTNvvQ~  405 (505)
T 3lwt_X          370 KVIDSN-------------------------------------------G-NTVEIVNEQHSVVRTNCMDCLDRTNVVQS  405 (505)
T ss_dssp             EEECTT-------------------------------------------S-CEEEEEECCCEEEEEETTSCHHHHHHHHH
T ss_pred             eeccCC-------------------------------------------C-CccceeeccceEEEEecccccccchHHHH
Confidence            632210                                           0 01357889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCCCC-CCCCchHHHHHHHHHHHhhhHhHhhhcCCccccceeeeeccccccccchHHHHHHHHH
Q 006853          496 AYGVVALGLQLKTLGLLKSPN-IGLDNPLAKDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFLRTLQR  574 (628)
Q Consensus       496 ~i~~~~L~~qL~~lgi~~~~~-~~~~~~~~~~~~~lw~~~GD~iS~qYaGT~Alk~~~t~r~gk~~~~~~~~D~~~S~~R  574 (628)
                      +||+.+|+.||+.||+...+. ++.++++...|++||+||||+||+|||||+|+|++|| |+|||+.+|+++|+++|++|
T Consensus       406 ~i~~~~L~~qL~~lgi~~~~~~~~~~~~~~~~f~~lWadnGD~iS~qYaGT~Alkt~~t-R~gk~~~~g~l~D~~~S~~R  484 (505)
T 3lwt_X          406 VLAQWVLQKEFESADVVATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFT-RTGKRTRLGAFNDFLNSASR  484 (505)
T ss_dssp             HHHHHHHHHHHHHTTSSCTTCCGGGCHHHHHHHHHHHHHHHHHHTTTCCCCC----------------------------
T ss_pred             HHHHHHHHHHHHHcCCCCCccccccCHHHHHHHHHHHHHhhHHHHHHhcCCccccCcee-eceeechhhhHHHHHHhHhh
Confidence            999999999999999987654 4567889999999999999999999999999999998 89999999999999999999


Q ss_pred             HHhhccCChhhHHHHHHHhcC
Q 006853          575 YYSNTYVDAEKQNAINVFLGH  595 (628)
Q Consensus       575 yy~NnF~D~~kQ~aidL~LG~  595 (628)
                      ||+|||.|+.||+|||||||+
T Consensus       485 yy~NnF~D~~rQ~aidl~LGn  505 (505)
T 3lwt_X          485 YYQNNWTDGPRQDSYDLFLGG  505 (505)
T ss_dssp             ---------------------
T ss_pred             eeecccCcHHHHHHHHHHcCC
Confidence            999999999999999999996

PyMOL of 3lwt

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00